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Conserved domains on  [gi|1149982970|ref|WP_077909649|]
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DUF1460 domain-containing protein [Salmonella enterica]

Protein Classification

DUF1460 domain-containing protein( domain architecture ID 10538150)

DUF1460 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF1460 pfam07313
Protein of unknown function (DUF1460); This family consists of several hypothetical bacterial ...
62-261 2.53e-111

Protein of unknown function (DUF1460); This family consists of several hypothetical bacterial proteins of around 260 residues in length. The function of this family is unknown.


:

Pssm-ID: 429403  Cd Length: 216  Bit Score: 319.66  E-value: 2.53e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149982970  62 RVSSAFLGTPYQADTLIGGPGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDW 141
Cdd:pfam07313   1 AISRAFLGTPYGANTLIGSANTPEQLVIDFDGFDCFTYVDYVLALARSSSYADFARNLVNTRYRNGKVGYLSRKHFFSDW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149982970 142 FAAAPRN--ARDVTPDISP-------DYVVVDKQLNHKPDGGEYIPGLGIHPRKI---NYIPGRAINQQVMNHLKNGDYI 209
Cdd:pfam07313  81 IANNPRRgfARDVTAQISGqdvktlsYMITVPKQYNQKADGGEYIPGLGVIERRIrpvNYIPSEAIDDAVLDQLQTGDII 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1149982970 210 GVYSPLDGLDVSHVGIVVRHDEQVWFRNASSLAANRKVVDTPFMEYMHSRPG 261
Cdd:pfam07313 161 GIYTPLPGLDVTHTGIVIRTDNGIVFRNASSLAGNVKVVDSPLLDYVRKKPS 212
 
Name Accession Description Interval E-value
DUF1460 pfam07313
Protein of unknown function (DUF1460); This family consists of several hypothetical bacterial ...
62-261 2.53e-111

Protein of unknown function (DUF1460); This family consists of several hypothetical bacterial proteins of around 260 residues in length. The function of this family is unknown.


Pssm-ID: 429403  Cd Length: 216  Bit Score: 319.66  E-value: 2.53e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149982970  62 RVSSAFLGTPYQADTLIGGPGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDW 141
Cdd:pfam07313   1 AISRAFLGTPYGANTLIGSANTPEQLVIDFDGFDCFTYVDYVLALARSSSYADFARNLVNTRYRNGKVGYLSRKHFFSDW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149982970 142 FAAAPRN--ARDVTPDISP-------DYVVVDKQLNHKPDGGEYIPGLGIHPRKI---NYIPGRAINQQVMNHLKNGDYI 209
Cdd:pfam07313  81 IANNPRRgfARDVTAQISGqdvktlsYMITVPKQYNQKADGGEYIPGLGVIERRIrpvNYIPSEAIDDAVLDQLQTGDII 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1149982970 210 GVYSPLDGLDVSHVGIVVRHDEQVWFRNASSLAANRKVVDTPFMEYMHSRPG 261
Cdd:pfam07313 161 GIYTPLPGLDVTHTGIVIRTDNGIVFRNASSLAGNVKVVDSPLLDYVRKKPS 212
 
Name Accession Description Interval E-value
DUF1460 pfam07313
Protein of unknown function (DUF1460); This family consists of several hypothetical bacterial ...
62-261 2.53e-111

Protein of unknown function (DUF1460); This family consists of several hypothetical bacterial proteins of around 260 residues in length. The function of this family is unknown.


Pssm-ID: 429403  Cd Length: 216  Bit Score: 319.66  E-value: 2.53e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149982970  62 RVSSAFLGTPYQADTLIGGPGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDW 141
Cdd:pfam07313   1 AISRAFLGTPYGANTLIGSANTPEQLVIDFDGFDCFTYVDYVLALARSSSYADFARNLVNTRYRNGKVGYLSRKHFFSDW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149982970 142 FAAAPRN--ARDVTPDISP-------DYVVVDKQLNHKPDGGEYIPGLGIHPRKI---NYIPGRAINQQVMNHLKNGDYI 209
Cdd:pfam07313  81 IANNPRRgfARDVTAQISGqdvktlsYMITVPKQYNQKADGGEYIPGLGVIERRIrpvNYIPSEAIDDAVLDQLQTGDII 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1149982970 210 GVYSPLDGLDVSHVGIVVRHDEQVWFRNASSLAANRKVVDTPFMEYMHSRPG 261
Cdd:pfam07313 161 GIYTPLPGLDVTHTGIVIRTDNGIVFRNASSLAGNVKVVDSPLLDYVRKKPS 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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