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Conserved domains on  [gi|1120145539|ref|WP_073015648|]
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DUF2312 domain-containing protein [Roseibium suaedae]

Protein Classification

DUF2312 domain-containing protein( domain architecture ID 10007946)

uncharacterized DUF2312 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3750 COG3750
Uncharacterized conserved protein, UPF0335 family [Function unknown];
11-84 6.25e-43

Uncharacterized conserved protein, UPF0335 family [Function unknown];


:

Pssm-ID: 442964  Cd Length: 81  Bit Score: 134.19  E-value: 6.25e-43
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1120145539 11 VAGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALGM 84
Cdd:COG3750    7 VAADQLRSFIERIERLEEEKKAIADDIKEVYAEAKGNGFDVKVLRQIIRLRKMDPDEREEEEALLDLYKAALGM 80
 
Name Accession Description Interval E-value
COG3750 COG3750
Uncharacterized conserved protein, UPF0335 family [Function unknown];
11-84 6.25e-43

Uncharacterized conserved protein, UPF0335 family [Function unknown];


Pssm-ID: 442964  Cd Length: 81  Bit Score: 134.19  E-value: 6.25e-43
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1120145539 11 VAGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALGM 84
Cdd:COG3750    7 VAADQLRSFIERIERLEEEKKAIADDIKEVYAEAKGNGFDVKVLRQIIRLRKMDPDEREEEEALLDLYKAALGM 80
PRK13694 PRK13694
hypothetical protein; Provisional
 9-84 1.92e-36

hypothetical protein; Provisional


Pssm-ID: 237474  Cd Length: 83  Bit Score: 117.86  E-value: 1.92e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1120145539  9 EAVAGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALGM 84
Cdd:PRK13694   7 EVVAKEQLRAFIERIERLEEEKKTISDDIKDVYAEAKGNGFDVKALKTIIRLRKKDDDERAEEEAILDLYMDALGM 82
DUF2312 pfam10073
Uncharacterized protein conserved in bacteria (DUF2312); Members of this family of ...
 12-83 1.03e-35

Uncharacterized protein conserved in bacteria (DUF2312); Members of this family of hypothetical bacterial proteins have no known function. Structural modelling suggests this domain may bind nucleic acids.


Pssm-ID: 431032  Cd Length: 72  Bit Score: 115.36  E-value: 1.03e-35
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1120145539 12 AGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALG 83
Cdd:pfam10073  1 AADQLRQFIERIERLEEEKKAIAEDIKDVYAEAKGRGFDTKVMRKIVKLRKMDKDERQEQEALLELYKAALG 72
 
Name Accession Description Interval E-value
COG3750 COG3750
Uncharacterized conserved protein, UPF0335 family [Function unknown];
11-84 6.25e-43

Uncharacterized conserved protein, UPF0335 family [Function unknown];


Pssm-ID: 442964  Cd Length: 81  Bit Score: 134.19  E-value: 6.25e-43
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1120145539 11 VAGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALGM 84
Cdd:COG3750    7 VAADQLRSFIERIERLEEEKKAIADDIKEVYAEAKGNGFDVKVLRQIIRLRKMDPDEREEEEALLDLYKAALGM 80
PRK13694 PRK13694
hypothetical protein; Provisional
 9-84 1.92e-36

hypothetical protein; Provisional


Pssm-ID: 237474  Cd Length: 83  Bit Score: 117.86  E-value: 1.92e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1120145539  9 EAVAGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALGM 84
Cdd:PRK13694   7 EVVAKEQLRAFIERIERLEEEKKTISDDIKDVYAEAKGNGFDVKALKTIIRLRKKDDDERAEEEAILDLYMDALGM 82
DUF2312 pfam10073
Uncharacterized protein conserved in bacteria (DUF2312); Members of this family of ...
 12-83 1.03e-35

Uncharacterized protein conserved in bacteria (DUF2312); Members of this family of hypothetical bacterial proteins have no known function. Structural modelling suggests this domain may bind nucleic acids.


Pssm-ID: 431032  Cd Length: 72  Bit Score: 115.36  E-value: 1.03e-35
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1120145539 12 AGDQLRAFVERIERLEEEKKVIGDDIKDVYAEAKGNGFDTTILRKVVSLRKKQPHEREEEEAILDLYLQALG 83
Cdd:pfam10073  1 AADQLRQFIERIERLEEEKKAIAEDIKDVYAEAKGRGFDTKVMRKIVKLRKMDKDERQEQEALLELYKAALG 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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