|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-673 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 1212.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 1 MVVLNKNKIALGVVAAIASSFVMTATAENV--EKLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGV 78
Cdd:PRK13513 3 QRFRKTHKAALVIAAAISSQAYAAEKTNTAtpTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 79 LVTGGGSSSDISIRGMDAKYTMILVDGKRVASRETRPNSDNAGIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINI 158
Cdd:PRK13513 83 VVTGGGSTSDISIRGMAAKYTLILVDGKRVDTRSTRPNSDGSGIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINI 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 159 ITRKAQKEWNFSLRADSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDKIVNGYNRQITATGGGTLSWTP 238
Cdd:PRK13513 163 ITRKVQKEWHGSLRADATLQEDSKSGDIFQTNAYASGPLIDGLLGLKVSGLLSHRSEDKIIDGYNEQRMRNGTATFSLTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 239 DEQNTIDFEFKKDNQHRDSRVWHSKSGLPSrgkapeSSFTDYELTHYALTHDGIYDFGTMNTYVQRDESRNPSRKMDYDD 318
Cdd:PRK13513 243 DDNNEFDFEIGRYVQDRNSTPGRTLALNGT------NSDTQYDRNNYAITHNGYYDFGNSTSYIQRDETRNPSRQMKSVD 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 319 TTVRNQTVLMFGDHTLSVGAQYRYEELKDEGNKLKAS---NKLDRYSWALFAEDEWAMTNDFALTGGLRMDKDENFGTHW 395
Cdd:PRK13513 317 TIFNTQTSFLLDDHTLSLGGQYRYEELYDKGNQLPSAsdlNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHW 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 396 TPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNYDAVIYGNPSLKPEKSVTEEISIIWDNRENLTASLG 475
Cdd:PRK13513 397 TPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNWGQLTGGGGLPALILGNSDLKPEKSISQEIGILWDNQENLNASVT 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 476 LFNTDFKDKIMEVRRCDSrTNKDGSKMApgirdcnlsdgvsnGGDAYDFVSDRTNVDKANMRGVEATFNWTISPEWNLAA 555
Cdd:PRK13513 477 LFNTDFKDKITEVRNCDT-TNTDGQCVF--------------NGINYDFISDRINVDKANMRGVEATFNWDINQAWSLAT 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 556 NYTFTDTEQKSGDFKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTSDYLARTSMSHGTPSYAFVDIGTSYSLTK 635
Cdd:PRK13513 542 NYTFTQSEQKSGAFAGQPLNQMPKHMANATLNWQTTEDFATWIRINYRGKTSEYLNRTSMGSGTPSYTFVDLGASYQLTK 621
|
650 660 670
....*....|....*....|....*....|....*...
gi 1114044825 636 QLNVIGGVYNVLDRRIDQEHFNTTLEGRRYNIGLNYNF 673
Cdd:PRK13513 622 ELRLMGGVYNLLDKRVDIDVNDKVLDGRRYMVGASYDF 659
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
9-639 |
2.97e-130 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 397.31 E-value: 2.97e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 9 IALGVVAAIASSFVMTATAENVEKLlVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVT---GGGS 85
Cdd:COG4771 6 LLLLLALAAQAADALAEDATELEEV-VVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTrsgGRGG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 86 SSDISIRGMDAKYTMILVDGKRVASRetrpnSDNAGIEQGWLPPLpAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQK 165
Cdd:COG4771 85 SSGISIRGLGGDRVLVLIDGVPVNNP-----ALGGGGDLSYIPPD-DIERIEVIRGPASALYGSDAIGGVINIITKKPTD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 166 EWNFSLRADSTITERkdsgNTNQGSFYAAGPliDNVLGLKIQGQYSHRSE-----DKIVNGYNRQITATGGGTLSWTPDE 240
Cdd:COG4771 159 ELEGSVSLGYGSNGN----GTYSGSLSLGGP--GDKLSFLLSGSYRDRDGyldyrNGGFVGNSGYERYNLNAKLGYRLSD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 241 QNTIDFEFKKDNQHRDSRVWHSKSGLPSRGKAPESSFTdYELTHYALTHDGIYDfGTMNTYVQRDESRNPS--------- 311
Cdd:COG4771 233 NHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTT-TDRGNYSLRYNGDLG-DNLDLSLYYSRTDRDStngslggst 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 312 ---RKMDYDDTTVRNQTVLMFGD-HTLSVGAQYRYEELKDEGnkLKASNKLDRYSWALFAEDEWAMTNDFALTGGLRMDK 387
Cdd:COG4771 311 gsfSDSDDTTYGLELDLTYPLGGnHTLTLGAEYRYDDLDSSS--FLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDY 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 388 DENFG----THWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGggnydAVIYGNPSLKPEKSVTEEISII 463
Cdd:COG4771 389 YSTFGasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPG-----RYVLGNPDLKPETSDNYELGLE 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 464 WD-NRENLTASLGLFNTDFKDKImevrrcdsrtnkdgskmapgirdcnlsdGVSNGGDAYDFVSDRTNVDKANMRGVEAT 542
Cdd:COG4771 464 YRlGNGGLSLSLTGFYTDIKDLI----------------------------VLVPVGPGPGDVLQYENVGKARTYGLELE 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 543 FNWTISPEWNLAANYTFTDTEQKSGDfKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTSDYLARTSMSHGTPSY 622
Cdd:COG4771 516 LKYRLGKGLTLTASYTYLDSKIDDGD-TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPGY 594
|
650
....*....|....*..
gi 1114044825 623 AFVDIGTSYSLTKQLNV 639
Cdd:COG4771 595 TLLDLRASYKLTKNLTL 611
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
51-673 |
2.16e-106 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 336.35 E-value: 2.16e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 51 SVSVVTREQLETKSYRDVTDALKDVPGVLVT--GGGSSSDISIRGMDAKYTMILVDGKRVASRETRPNSDNagieqgWLP 128
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTrgGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVDL------NTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 129 PLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRADSTITERKDSGNTNqgsFYAAGPLIDN-VLGLKIQ 207
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGG---FDVSGALADDgAFGARLY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 208 GQYSHRSEDKIVNGY---NRQITATGGGTLSWTPDEQNTIDF--EFKKDNQHRDSRVWHSKSGLPSRGKAPESSFT---- 278
Cdd:cd01347 152 GAYRDGDGTIDGDGQaddSDEERYNVAGKLDWRPDDDTRLTLdaGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNgdrd 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 279 ------DYELTHYALTHDGIYDFGTMN---TYVQRDESRNP-------------------SRKMDYDDTTVRNQTVLMFG 330
Cdd:cd01347 232 wdyrdrYRKRASLGLEHDLNDTGWTLRanlSYSYTDNDGDPlilnggnnaaggdlgrsgySSERDTTQLGFDAGLNAPFG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 331 D----HTLSVGAQYRYEelkdegnklkasnKLDRYSWALFAEDEWAMTNDFALTGGLRMDK--------------DENFG 392
Cdd:cd01347 312 TgpvaHTLTLGVEYRRE-------------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHydqdskdtiaggttAKKSY 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 393 THWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGggnydaVIYGNPSLKPEKSVTEEISIIWDNRENLTA 472
Cdd:cd01347 379 SHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGT------AAVGNPNLKPEKSKQYELGLKYDPGDGLTL 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 473 SLGLFNTDFKDKIMEVRRCDSRTNKDGSkmapgirdcnlsdgvsnggdaydfvsdrTNVDKANMRGVEATFNWTISPEWN 552
Cdd:cd01347 453 SAALFRIDIKNEIVSTPTNTGLGLVTVY----------------------------VNGGKARIRGVELEASYDLTDGLG 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 553 LAANYTFTDTEQK--SGDFKGKPLNKQPRHMANATLNWETTPE-METWARINFRGKTSDYLARTSMSHGTPSYAFVDIGT 629
Cdd:cd01347 505 LTGSYTYTDTEVKrtDGATTGNRLPGIPKHTANLGLDYELPDEgLTAGGGVRYRGKQYADTANGNNTVKVPGYTLVDLSA 584
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1114044825 630 SYSLTKQLNVIGGVYNVLDRRIDQ-------EHFNTTLEGRRYNIGLNYNF 673
Cdd:cd01347 585 SYQFTKNLTLRLGVNNLFDKDYYTslsvrgsGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
35-673 |
4.52e-64 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 224.19 E-value: 4.52e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 35 VTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTGGGSSS--DISIRGMDAKYTMILVDGkrvasre 112
Cdd:TIGR01785 5 TVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPgqSINIRGLQDNRVLVVVDG------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 113 TRPNSDNAGIEQGWLPPLPA-IERIEVVRGPMSSLYGSDAMGGVINIITRKA----QKEWNFSLRADSTiteRKDSGNTN 187
Cdd:TIGR01785 78 ARQNYQRGGAHNGSLFVDPElLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAadllRPGQLFGGLAKLS---YGSNNNSF 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 188 QGSFYAAGPLIDNVLGLkIQGQYSHRSEDKIVNGYNRQITAT----GGGTLSWTPDEQNTIDFEFKKDNQHRD------- 256
Cdd:TIGR01785 155 GGSVAVAGRLDDNLDAL-VAATYRDGGNYRNGNKEEATNSAYvqknLLAKLGWQLDDAQRLEFSYFTTEGSLDeaqnsgp 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 257 --SRVWHSKSGLPSRGKAPESsftdYELTHYALTHDGIYDFGTMNTYVQRDESRN------PSRKMDYDDTT----VRNQ 324
Cdd:TIGR01785 234 gtEYVLGSSSTLLASSTRDRS----ATLTYNWTPEDNPWLDATASLYYNRTENDNdrsargVGREEGYQYTTygatLQNT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 325 TVLMFGDH-TLSVGAQYRYEELKDEGNKLKASNKL-------DRYSWALFAEDEWAMTND-FALTGGLRMDK-----DEN 390
Cdd:TIGR01785 310 SRFDVASWsTLTYGVDWMKDKRRTESFDPNSVTTIvpnppsaKEYFFGLFLQDNIPLLDDrLTLSAGLRYDHyklspKTT 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 391 FGT--------HWTPRVYGVWHLTDEWTLKGGVSTGYRSPD-LRQATASWGQGTGGGNYdavIYGNPSLKPEKSVTEEIS 461
Cdd:TIGR01785 390 ADTeavdrsysRWSPSLGLSYKPVDWLTLYASYSQGFRAPSiDELYGTGDHPGTPGGYT---FAPNPNLKPETSKTWELG 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 462 I------IWDNRENLTASLGLFNTDFKDKIMEVRrcdsrtnkdgskmapgIRDCNLSDGVSNggdAYDFVsdrtNVDKAN 535
Cdd:TIGR01785 467 AnlsfdnLLLDNDQLQFKVAYFYNDVKDFIDLTI----------------GVTDNVTAGMNN---ITQYV----NIDGAR 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 536 MRGVEATFNWTiSPEWNLAANYTFTDTEQKSgdfKGKPLNKQPRHMANATLNWETTPE-METWARINFRGKTSDYLARTS 614
Cdd:TIGR01785 524 IRGIEASASYD-AGLWATGLSYGYTIGKDQN---TNQWLSNIPPLKLVVTVGYRFPDRrLDLGAKAAYYERQSESPTTED 599
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1114044825 615 MSHG----TPSYAFVDIGTSYSLT--KQLNVIGGVYNVLDRRIdQEHFN--TTLEGRRYNIGLNYNF 673
Cdd:TIGR01785 600 VAANglltTPGYTVVDLYATYQPNavKGLTVRFGVNNLTDRKY-TPAQSvpGAGPGRNFKGSVKYQF 665
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
220-672 |
7.18e-47 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 172.65 E-value: 7.18e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 220 NGYNRQITATGGGTLSWTPDEQNTIDFEFkkdnQHRDSRVWHSKSGLpsrgkapessFTDYELTHYALTHDGIYDFGTmN 299
Cdd:pfam00593 41 GGYLGDRPLYYGRDYSDTDRKRLSLGYDY----DLGDGLSWLSTLRL----------GLRYSSLDGDYTSNSSGLSGA-G 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 300 TYVQRDESRNPSRKMDYDDTTVRNQTVLMFGDHTLSVGAQYR------YEELKDEGNKLKASNKLDRYSWALFAEDEWAM 373
Cdd:pfam00593 106 DYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRrldddaYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 374 TNDFALTGGLRMDKDENFGT--------------HWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGgn 439
Cdd:pfam00593 186 TDRLTLTLGLRYDHYSTDGDdgngggdnfsrsysAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGG-- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 440 ydAVIYGNPSLKPEKSVTEEISIIWDNReNLTASLGLFNTDFKDKIMevrrcdsrtnkdgskmapgirdcNLSDGVSNGG 519
Cdd:pfam00593 264 --AVAGGNPDLKPETSDNYELGLKYDDG-RLSLSLALFYIDIKNLIT-----------------------SDPDGPGLGG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 520 DAYDFvsdrTNVDKANMRGVEATFNWTISPEWNLAANYTFTDTE-QKSGDFKGKPLNKQPRHMANATLNWEttPEMETW- 597
Cdd:pfam00593 318 TVYTY----TNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADdDADADDTGNPLPNVPRHTANLGLTYD--FPLGGWg 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 598 --ARINFRGKTSDYLARTSMSHGTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDQ-------EHFNTTLEGRRYNIG 668
Cdd:pfam00593 392 arLGARYVGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRyyssgggNLGGYPGPGRTFYLG 471
|
....
gi 1114044825 669 LNYN 672
Cdd:pfam00593 472 LSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-673 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 1212.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 1 MVVLNKNKIALGVVAAIASSFVMTATAENV--EKLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGV 78
Cdd:PRK13513 3 QRFRKTHKAALVIAAAISSQAYAAEKTNTAtpTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 79 LVTGGGSSSDISIRGMDAKYTMILVDGKRVASRETRPNSDNAGIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINI 158
Cdd:PRK13513 83 VVTGGGSTSDISIRGMAAKYTLILVDGKRVDTRSTRPNSDGSGIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINI 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 159 ITRKAQKEWNFSLRADSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDKIVNGYNRQITATGGGTLSWTP 238
Cdd:PRK13513 163 ITRKVQKEWHGSLRADATLQEDSKSGDIFQTNAYASGPLIDGLLGLKVSGLLSHRSEDKIIDGYNEQRMRNGTATFSLTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 239 DEQNTIDFEFKKDNQHRDSRVWHSKSGLPSrgkapeSSFTDYELTHYALTHDGIYDFGTMNTYVQRDESRNPSRKMDYDD 318
Cdd:PRK13513 243 DDNNEFDFEIGRYVQDRNSTPGRTLALNGT------NSDTQYDRNNYAITHNGYYDFGNSTSYIQRDETRNPSRQMKSVD 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 319 TTVRNQTVLMFGDHTLSVGAQYRYEELKDEGNKLKAS---NKLDRYSWALFAEDEWAMTNDFALTGGLRMDKDENFGTHW 395
Cdd:PRK13513 317 TIFNTQTSFLLDDHTLSLGGQYRYEELYDKGNQLPSAsdlNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHW 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 396 TPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNYDAVIYGNPSLKPEKSVTEEISIIWDNRENLTASLG 475
Cdd:PRK13513 397 TPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNWGQLTGGGGLPALILGNSDLKPEKSISQEIGILWDNQENLNASVT 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 476 LFNTDFKDKIMEVRRCDSrTNKDGSKMApgirdcnlsdgvsnGGDAYDFVSDRTNVDKANMRGVEATFNWTISPEWNLAA 555
Cdd:PRK13513 477 LFNTDFKDKITEVRNCDT-TNTDGQCVF--------------NGINYDFISDRINVDKANMRGVEATFNWDINQAWSLAT 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 556 NYTFTDTEQKSGDFKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTSDYLARTSMSHGTPSYAFVDIGTSYSLTK 635
Cdd:PRK13513 542 NYTFTQSEQKSGAFAGQPLNQMPKHMANATLNWQTTEDFATWIRINYRGKTSEYLNRTSMGSGTPSYTFVDLGASYQLTK 621
|
650 660 670
....*....|....*....|....*....|....*...
gi 1114044825 636 QLNVIGGVYNVLDRRIDQEHFNTTLEGRRYNIGLNYNF 673
Cdd:PRK13513 622 ELRLMGGVYNLLDKRVDIDVNDKVLDGRRYMVGASYDF 659
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
10-673 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 803.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 10 ALGVVAAIASSFVMTATAENVE-KLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTGGGSSSD 88
Cdd:PRK13483 11 ALCLLPAVFVTHALAQAAPDKTmETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVTGGGDRTD 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 89 ISIRGMDAKYTMILVDGKRVASRETRPNSDNAGIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWN 168
Cdd:PRK13483 91 ISLRGMGSQYTLILVDGKRQSSRETRPNSDGPGVEQAWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNEWQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 169 FSLRADSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDKIVNGYN----RQITAtgggTLSWTPDEQNTI 244
Cdd:PRK13483 171 GEVRLDTTLQENSDSGNVYQANFFVNGPLIKDLLGLQLYGQYTQREEDDIEGGYRdkdaRSLTA----KLALTPNEDHDI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 245 DFEFKKDNQHRDSRVWHSKSGLPS-----RGKAPESSFTDYELTHYALTHDGIYDFGTMNTYVQRDESRNPSRKMDYDDT 319
Cdd:PRK13483 247 MLEVGTSNQERDSTVGKTVAPLAPgescgRRGCPESSTTEYERSTVSLSHTGRWDFGTSDTYIQHEEFDNKSREMKIKNT 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 320 TVRNQTVLMFG-DHTLSVGAQYRYEELKDE-GNKLKASNKLDRYSWALFAEDEWAMTNDFALTGGLRMDKDENFGTHWTP 397
Cdd:PRK13483 327 DFQSSLVAPLGqEHTLTFGAAYNHQDLTDEtSNQISDLTDISRTQWAVFSEDEWRIADDFALTGGLRLDHDENFGGHVSP 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 398 RVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNydavIYGNPSLKPEKSVTEEISIIWDNRENLTASLGLF 477
Cdd:PRK13483 407 RVYGVWNLAPSWTVKGGVSTGFRAPSLRQTTPDWGQVSRGGN----IYGNPDLKPETSLNKELGLYYDLGSGLTASLTVF 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 478 NTDFKDKIMEV----RRCDSRTNKDGSkmAPgirdcnlsdgvsnggdaydfvSDRTNVDKANMRGVEATFNWTISPEWNL 553
Cdd:PRK13483 483 YNEFKDKITRVacpaTQCTDGPNQFGA--DP---------------------TTYVNIDEAVTQGVEASLSYPITSTLSL 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 554 AANYTFTDTEQKSGDFKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTSDylARTSMSHGT---PSYAFVDIGTS 630
Cdd:PRK13483 540 SGNYTYTDSEQKSGAYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQ--PTTGPSSSSfiaPSYTFLDLGAN 617
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1114044825 631 YSLTKQLNVIGGVYNVLDRRIDQEHFNTTLEGRRYNIGLNYNF 673
Cdd:PRK13483 618 YQLTDNLKLSAGIYNLFDKEINYEEYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
5-673 |
6.75e-168 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 496.84 E-value: 6.75e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 5 NKNKIALGVvAAIASSFVMT--ATAENVEKLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTG 82
Cdd:PRK13484 3 NKYIIAPGI-AVMCSAVISSgyASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 83 GGSSSDISIRGMDAKYTMILVDGKRVASRETRPNSdNAGIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRK 162
Cdd:PRK13484 82 GNEKPDISIRGLSGDYTLILVDGRRQSGRESRPNG-SGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 163 AQKE-WNFSLRADSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDKIVNGY----NRQITAtgggTLSWT 237
Cdd:PRK13484 161 VNNQtWDGVLGLGGIIQEHGKFGNSTTNDFYLSGPLIKDKLGLQLYGGMNYRKEDSISQGTpakdNKNITA----TLQFT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 238 PDEQNTIDFEFKKDNQHRDSRVWHSKSGLPSRG--KAPESSF-TDYELTHYALTHDGIYDF--GTMNTY------VQRDE 306
Cdd:PRK13484 237 PTESQKFVFEYGKNNQVHTLTPGESLDAWTMRGnlKQPNSKReTHNSRSHWVAAWNAQGEIlhPEIAVYqekvirEVKSG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 307 SRNP---------SRKMDYDDTTVRNQTVLMFGDHTLSVGAQYRYEELKDE---GNKLKASNKLDRYSWALFAEDEWAMT 374
Cdd:PRK13484 317 KKDKynhwdlnyeSRKPEITNTIIDAKVTAFLPENVLTIGGQFQHAELRDDsatGKKTTETQSVSIKQKAVFIENEYAAT 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 375 NDFALTGGLRMDKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNydAVIYGNPSLKPEK 454
Cdd:PRK13484 397 DSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSPGFGTLTQGGA--SIMYGNRDLKPET 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 455 SVTEEISIIWDNRENLTASLGLFNTDFKDKImevrrcdsrTNKDGSKMAPgIRDCNLsdgvsnggdaydFVSDrtNVDKA 534
Cdd:PRK13484 475 SVTEEIGIIYSNDSGFSASATLFNTDFKNKL---------TSYDIGTKDP-VTGLNT------------FIYD--NVGEA 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 535 NMRGVEATFNWTISPEWNLAANYTFTDTEQKSGD-------FKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTS 607
Cdd:PRK13484 531 NIRGVELATQIPVYDKWHVSANYTFTDSRRKSDDeslngksLKGEPLERTPRHAANAKLEWDYTQDITFYSSLNYTGKQI 610
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1114044825 608 dYLARTSMSHGT---PSYAFVDIGTSYSLTKQLNVIGGVYNVLDRR---IDQEHFNTTL-EGRRYNIGLNYNF 673
Cdd:PRK13484 611 -WAAQRNGAKVPrvrNGFTSMDIGLNYQILPDTLINFAVLNVTDRKsedIDTIDGNWQVdEGRRYWANVRVSF 682
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
12-673 |
4.37e-143 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 432.39 E-value: 4.37e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 12 GVVAAIASSFVMTATAENVEKLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTGGGSS-SDIS 90
Cdd:PRK10064 11 GLCASAISCAWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNrKGVS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 91 IRGMDAKYTMILVDGKRVASRET--RPNSdnagIEQGWLPpLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWN 168
Cdd:PRK10064 91 IRGLDSSYTLILIDGKRVNSRNAvfRHND----FDLNWIP-VDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWH 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 169 FSLRADSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDKIVNgynrQITATGGGT--------------L 234
Cdd:PRK10064 166 GTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQN----STTTDTGETpriegftsrdgnveF 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 235 SWTPDEQNTIDFEFKKDNQHRDSRvwhsksglpsrgkapESSFTDYELTHYALTHDGIYDFGT--MNTYVQRDESRNP-- 310
Cdd:PRK10064 242 AWTPNQNHDFTAGYGFDRQDRDSD---------------SLDKNRLERQNYSLSHNGRWDYGNseLKYYGEKVENKNPgn 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 311 SRKMDYDDTTVRNQTVLMFG--DHTLSVGAQYRYEELKDEGNKLKA-SNKLDRYSWALFAEDEWAMTNDFALTGGLRMDK 387
Cdd:PRK10064 307 SSPITSESNSIDGKYTLPLTaiNQFLTFGGEWRHDKLSDAVNLTGGtSSKTSASQYALFVEDEWRIFEPLALTTGVRMDD 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 388 DENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNydAVIYGNPSLKPEKSVTEEISIIWDNR 467
Cdd:PRK10064 387 HETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGA--CKIVGSPDLKPETSESWELGLYYMGE 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 468 E----NLTASLGLFNTDFKDKIMEVRRCDsrtnkdgSKMAPGIRdcNLSDGVSNGGDAYDFVSDRTNVDKANMRGVEATF 543
Cdd:PRK10064 465 EgwleGVESSVTVFRNDVDDRISISRTSD-------VNAAPGYQ--NFVGFETNGRGRRVPVFRYYNVNKARIQGVETEL 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 544 NWTISPEWNLAANYTFTDTEQKSGDfKGKPLNKQPRHMANATLNWETTpEMETWA---RINFRGKTSDylarTSMSHGTP 620
Cdd:PRK10064 536 KIPFNDEWKLSLNYTYNDGRDVSNG-ENKPLSDLPFHTANGTLDWKPL-ALEDWSfyvSGNYTGQKRA----DSATAKTP 609
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1114044825 621 S-YAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDQEHFNTTLEGRRYNIGLNYNF 673
Cdd:PRK10064 610 GgYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF 663
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
9-639 |
2.97e-130 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 397.31 E-value: 2.97e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 9 IALGVVAAIASSFVMTATAENVEKLlVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVT---GGGS 85
Cdd:COG4771 6 LLLLLALAAQAADALAEDATELEEV-VVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTrsgGRGG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 86 SSDISIRGMDAKYTMILVDGKRVASRetrpnSDNAGIEQGWLPPLpAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQK 165
Cdd:COG4771 85 SSGISIRGLGGDRVLVLIDGVPVNNP-----ALGGGGDLSYIPPD-DIERIEVIRGPASALYGSDAIGGVINIITKKPTD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 166 EWNFSLRADSTITERkdsgNTNQGSFYAAGPliDNVLGLKIQGQYSHRSE-----DKIVNGYNRQITATGGGTLSWTPDE 240
Cdd:COG4771 159 ELEGSVSLGYGSNGN----GTYSGSLSLGGP--GDKLSFLLSGSYRDRDGyldyrNGGFVGNSGYERYNLNAKLGYRLSD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 241 QNTIDFEFKKDNQHRDSRVWHSKSGLPSRGKAPESSFTdYELTHYALTHDGIYDfGTMNTYVQRDESRNPS--------- 311
Cdd:COG4771 233 NHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTT-TDRGNYSLRYNGDLG-DNLDLSLYYSRTDRDStngslggst 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 312 ---RKMDYDDTTVRNQTVLMFGD-HTLSVGAQYRYEELKDEGnkLKASNKLDRYSWALFAEDEWAMTNDFALTGGLRMDK 387
Cdd:COG4771 311 gsfSDSDDTTYGLELDLTYPLGGnHTLTLGAEYRYDDLDSSS--FLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDY 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 388 DENFG----THWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGggnydAVIYGNPSLKPEKSVTEEISII 463
Cdd:COG4771 389 YSTFGasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPG-----RYVLGNPDLKPETSDNYELGLE 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 464 WD-NRENLTASLGLFNTDFKDKImevrrcdsrtnkdgskmapgirdcnlsdGVSNGGDAYDFVSDRTNVDKANMRGVEAT 542
Cdd:COG4771 464 YRlGNGGLSLSLTGFYTDIKDLI----------------------------VLVPVGPGPGDVLQYENVGKARTYGLELE 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 543 FNWTISPEWNLAANYTFTDTEQKSGDfKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTSDYLARTSMSHGTPSY 622
Cdd:COG4771 516 LKYRLGKGLTLTASYTYLDSKIDDGD-TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPGY 594
|
650
....*....|....*..
gi 1114044825 623 AFVDIGTSYSLTKQLNV 639
Cdd:COG4771 595 TLLDLRASYKLTKNLTL 611
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
18-673 |
7.76e-126 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 388.61 E-value: 7.76e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 18 ASSFVMtATAENVeklLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLV---TGGGSSSDISIRGM 94
Cdd:PRK13486 16 FSASSI-AAAEDV---MIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVesgTGKTGGLEISIRGM 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 95 DAKYTMILVDGKRV-ASRETRPNSDNAgIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRA 173
Cdd:PRK13486 92 PASYTLILIDGVRQgGSSDVTPNGFSA-MNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 174 DSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDKIVNGYNRQITA----------TGGGTLSWTPDEQNT 243
Cdd:PRK13486 171 GLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRipyptesqnyNLGARLDWKASEQDV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 244 IDFEFKKDNQHRDSRvwhsKSGLPSRGKAPESSFTdYELTHYALTHDGIYDFGTMNTYVQRDESRNPSRKM--------- 314
Cdd:PRK13486 251 LWFDMDTTRQRYDNR----DGQLGSLTGGYDRTLR-YERNKISAGYDHTFTFGTWKSYLNWNETENKGRELvrsvlkrdk 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 315 ---DYDDTTVRNQTVLM-------FGD-HTLSVGAQYRYEELKDEGNKLKASNKLDRYSWALFAEDEWAMTNDFALTGGL 383
Cdd:PRK13486 326 wglAGQPRELKESNLILnsllltpLGEsHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDEWHLTDALALTAGS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 384 RMDKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNYDAViyGNPSLKPEKSVTEEISII 463
Cdd:PRK13486 406 RYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQGKTNLL--GNPDLKPEESVSYEAGVY 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 464 WDNRENLTASLGLFNTDFKDKImevrrcdsrtnkdgskmapgirdcnlsdgVSNGGDayDFVSDRTNVDKANMRGVE-AT 542
Cdd:PRK13486 484 YDNPAGLNANVTGFMTDFSNKI-----------------------------VSYSIN--DNTNSYVNSGKARLHGVEfAG 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 543 FNWTISPEWNLAANYTFTDTEQKSGDFKGKPLNKQPRHMANATLNWETTPEMETWARINFRGK----TSDYLARTSMSHG 618
Cdd:PRK13486 533 TLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSYTPEHMVNAKLNWQITEEVASWLGARYRGKtprfTQNYSSLSAVQKK 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 619 T--------PSYAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDQ--------------EHFNT-------TLEGRRYNIGL 669
Cdd:PRK13486 613 VydekgeylKAWTVVDAGLSWKMTDALTLNAAVNNLLNKDYSDvslysagkstlyagDYFQTgssttgyVIPERNYWMSL 692
|
....
gi 1114044825 670 NYNF 673
Cdd:PRK13486 693 NYQF 696
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
51-673 |
2.16e-106 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 336.35 E-value: 2.16e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 51 SVSVVTREQLETKSYRDVTDALKDVPGVLVT--GGGSSSDISIRGMDAKYTMILVDGKRVASRETRPNSDNagieqgWLP 128
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTrgGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVDL------NTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 129 PLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRADSTITERKDSGNTNqgsFYAAGPLIDN-VLGLKIQ 207
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGG---FDVSGALADDgAFGARLY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 208 GQYSHRSEDKIVNGY---NRQITATGGGTLSWTPDEQNTIDF--EFKKDNQHRDSRVWHSKSGLPSRGKAPESSFT---- 278
Cdd:cd01347 152 GAYRDGDGTIDGDGQaddSDEERYNVAGKLDWRPDDDTRLTLdaGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNgdrd 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 279 ------DYELTHYALTHDGIYDFGTMN---TYVQRDESRNP-------------------SRKMDYDDTTVRNQTVLMFG 330
Cdd:cd01347 232 wdyrdrYRKRASLGLEHDLNDTGWTLRanlSYSYTDNDGDPlilnggnnaaggdlgrsgySSERDTTQLGFDAGLNAPFG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 331 D----HTLSVGAQYRYEelkdegnklkasnKLDRYSWALFAEDEWAMTNDFALTGGLRMDK--------------DENFG 392
Cdd:cd01347 312 TgpvaHTLTLGVEYRRE-------------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHydqdskdtiaggttAKKSY 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 393 THWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGggnydaVIYGNPSLKPEKSVTEEISIIWDNRENLTA 472
Cdd:cd01347 379 SHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGT------AAVGNPNLKPEKSKQYELGLKYDPGDGLTL 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 473 SLGLFNTDFKDKIMEVRRCDSRTNKDGSkmapgirdcnlsdgvsnggdaydfvsdrTNVDKANMRGVEATFNWTISPEWN 552
Cdd:cd01347 453 SAALFRIDIKNEIVSTPTNTGLGLVTVY----------------------------VNGGKARIRGVELEASYDLTDGLG 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 553 LAANYTFTDTEQK--SGDFKGKPLNKQPRHMANATLNWETTPE-METWARINFRGKTSDYLARTSMSHGTPSYAFVDIGT 629
Cdd:cd01347 505 LTGSYTYTDTEVKrtDGATTGNRLPGIPKHTANLGLDYELPDEgLTAGGGVRYRGKQYADTANGNNTVKVPGYTLVDLSA 584
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1114044825 630 SYSLTKQLNVIGGVYNVLDRRIDQ-------EHFNTTLEGRRYNIGLNYNF 673
Cdd:cd01347 585 SYQFTKNLTLRLGVNNLFDKDYYTslsvrgsGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
35-650 |
3.79e-84 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 277.86 E-value: 3.79e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 35 VTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVT-GGGSSSDISIRGMDAKYT--MILVDGKRVasr 111
Cdd:COG1629 5 VVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTsAGGGAGQISIRGFGGGGNrvLVLVDGVPL--- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 112 etrpNSDNAGIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRADStiterkDSGNTNQGSF 191
Cdd:COG1629 82 ----NDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASY------GSYGTYRASL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 192 YAAGPliDNVLGLKIQGQYSHRSEDKIVNGYNRQitaTGGGTLSWTPDEQNTIDFEFKKDNQHRDSRVWHSKSGLPSRGK 271
Cdd:COG1629 152 SLSGG--NGKLAYRLSASYRDSDGYRDNSDSDRY---NLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 272 APE--------SSFTDYELTHYALTHDGIYDFGTMN---------TYVQRDESRNPSRKMDYDDTTVRNQTV-------- 326
Cdd:COG1629 227 MDDgtnpysndTDDNTRDRYSLSLEYEHLGDGLKLSasayyryddTDLDSDFTPTPADGGTLEQTDFDNRTYglelrlty 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 327 -LMFGD-HTLSVGAQYRYEELKDEGNKLK------------ASNKLDRYSWALFAEDEWAMTNDFALTGGLRMDKDENFG 392
Cdd:COG1629 307 dLGFGGkHTLLVGLDYQRQDLDGSGYPLDlgsgslptltsgADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDV 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 393 ----------------THWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASwgqgtgggNYDAVIYGNPSLKPEKSV 456
Cdd:COG1629 387 ddtvtgtdsasgsrsySAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYAN--------GTDPYSVGNPDLKPETST 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 457 TEEISIIWD-NRENLTASLGLFNTDFKDKIMEVRrcdsrtnkdgskmapgirdcnlsDGVSNGGDAYdfvsdRTNVDKAN 535
Cdd:COG1629 459 NYELGLRYRlLDGRLSLSLALFYSDVDNEILSVP-----------------------LPNDSGFSTY-----YTNAGKAR 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 536 MRGVEATFNWTISPEWNLAANYTFTDTEQKSG-----DFKGKPLNKQPRHMANATLNWETTPEMETWARINFRGKTsdYL 610
Cdd:COG1629 511 SYGVELELSYQLTPGLSLNASYSYTDAKFDDDtdgsaDLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDR--YL 588
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 1114044825 611 ARTSMSHGTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRR 650
Cdd:COG1629 589 DDANTQGAPGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKK 628
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
15-672 |
1.58e-81 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 273.44 E-value: 1.58e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 15 AAIASSFVMTATAENVEKLLVTTAsgfKQTVEDAPAsVSVVTREQLETKS-YRDVTDALKDVPGVLVTGGGSSS------ 87
Cdd:PRK13524 22 AAEAEDAKTDDTPASHEDTIVVTA---AEQNLQAPG-VSTITAEDIRKRPpANDVSEIIRTMPGVNLTGNSTSGqrgnnr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 88 DISIRGMDAKYTMILVDGKRVASRET-----RPNSDNAGiEQGWLPPlPAIERIEVVRGPMSSLYGSDAMGGVINIITRK 162
Cdd:PRK13524 98 QIDIRGMGPENTLILIDGKPVSSRNSvrygwRGERDTRG-DTNWVPP-EMIERIEVLRGPAAARYGNGAAGGVVNIITKK 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 163 AQKEWNFSLRADSTITERKDSGNTNQGSFYAAGPLIDNvLGLKIQGQYSHRSEDK--IVNGYNRQITATGGGT------- 233
Cdd:PRK13524 176 PTGEWHGSWNTYFNAPEHKAEGATKRTNFSLSGPLGDE-LSFRLYGNLNKTQADAwdINQGHQSARTGSYAGTlpagreg 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 234 ---------LSWTPDEQNTIDFE---------FKKDNQHRDSrvwhskSGLPSRGKAPESSfTDYELThYALTHDGIYDF 295
Cdd:PRK13524 255 vinkdinglLRWDFAPLQSLELEagysrqgnlYAGDTQNTNS------DALVKSLYGKETN-RMYRQN-YALTHRGGWDN 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 296 G-TMNTYVQRDESRNpSR---------------------KMDYDDTTVRNQTVLMFG---DHTLSVGAQYRYEELKDEGN 350
Cdd:PRK13524 327 GvSTSNYAQYEHTRN-SRlpeglaggtegifnekatqfsTIDLDDVMLHSEVNLPFDllvNQTLTLGTEWNQQRMKDPSS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 351 KLKA---------------SNKLDRYSWALFAEDEWAMTNDFALTGGLRMDKDENFGTHWTPRVYGVWHLTDEWTLKGGV 415
Cdd:PRK13524 406 NTQAltsggaipgvsatgrSPYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGI 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 416 STGYRSPDLRQAT-----ASWGQG-TGGGNYDAVIYGNPSLKPEKSVTEEISIIWDnRENLTASLGLFNTDFKDKImevr 489
Cdd:PRK13524 486 ARAYKAPNLYQTNpnyilYSKGQGcYASAGNGCYLQGNDDLKAETSVNKEIGLEFK-RDGWLAGLTWFRNDYRNKI---- 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 490 rcdsrtnkdGSKMAPGirdcnlsdGVSNGGDAYdfVSDRTNVDKANMRGVEATFNWTISPEWNLAANYTFT-DTEQKSgd 568
Cdd:PRK13524 561 ---------EAGYVPV--------GTNSVGKTD--IYQWENVPKAVVEGLEGTLNVPVSETVNWTNNLTYMlQSKNKT-- 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 569 fKGKPLNKQPRHMANATLNWETTPEME-----TW------ARINFRGKTSDYLARTSMShgtpSYAFVDIGTSYSLTKQL 637
Cdd:PRK13524 620 -TGDPLSIIPEYTLNSTLSWQATEDLSlqstfTWygkqkpKKYNYKGQPVTGSATKEVS----PYSIVGLSATYDVTKNV 694
|
730 740 750
....*....|....*....|....*....|....*.
gi 1114044825 638 NVIGGVYNVLDRRIDQEHFNTTLEGRRYNIGLN-YN 672
Cdd:PRK13524 695 SLTGGVDNLFDKRLWREGNAQTTGDLIAGAGAYtYN 730
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
9-673 |
3.50e-81 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 272.01 E-value: 3.50e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 9 IALGVVAAIASSFVMTATAENVEKLLV-TTAsgfKQTVEDAPaSVSVVTREQLE-TKSYRDVTDALKDVPGVLVTGG--- 83
Cdd:PRK13528 13 TVLLVGLNSPVSAAESSDDDNGETMVVeATA---EQELKQQP-GVSIITAEDIKkRPPVNDLSDIIRKMPGVNLTGNsas 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 84 ---GSSSDISIRGMDAKYTMILVDGKRVASRET-----RPNSDNAGiEQGWLPPlPAIERIEVVRGPMSSLYGSDAMGGV 155
Cdd:PRK13528 89 gtrGNNRQIDIRGMGPENTLILIDGVPVTSRNSvryswRGERDTRG-DTNWVPP-EMVERIEVIRGPAAARYGSGAAGGV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 156 INIITRKAQKEWNFSLRADSTITERKDSGNTNQGSFYAAGPLIDNVLGLKIQGQYSHRSEDK--IVNGYNRQITATGGGT 233
Cdd:PRK13528 167 VNIITKRPTNDWHGSLSLYTNQPESSKEGATRRANFSLSGPLAGDALTMRLYGNLNKTDADSwdINSSAGTKNAAGREGV 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 234 --------LSWTPDEQNTIDFE---------FKKDNQHRDSRVwhSKSGLPSRGKAPESSFTDyeltHYALTHDGIYDFG 296
Cdd:PRK13528 247 rnkdingvLSWKMTPQQILDFEagysrqgniYAGDTQNSNSSA--VTESLAKSGKETNRLYRQ----NYGLTHNGIWDWG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 297 TMNTYVQRDESRNPSRK------------MDYDDTTVR----------NQTVLMFGDHTLSVGAQYRYEELKD------- 347
Cdd:PRK13528 321 QSRLGFYYEKTNNTRMNeglagggegritADQTFTTSRlesyrtsgelNVPLNWLFEQTLTVGAEWNRDELNDpsstslt 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 348 ---------EGNKLKASNKLDRYSWALFAEDEWAMTNDFALTGGLRMDKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTG 418
Cdd:PRK13528 401 vkdgdiggiSGSAADRSSKNKSEISALYVEDNIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARA 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 419 YRSPDLRQAT-----ASWGQG-----TGGGNYdavIYGNPSLKPEKSVTEEISIIWDnRENLTASLGLFNTDFKDKIMEV 488
Cdd:PRK13528 481 FKAPNLYQSSegyllYSRGNGcpkdiTSGGCY---LVGNKNLDPEISVNKEIGLEFT-VDDYHASVTYFRNDYQNKIVAG 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 489 RRCDSRTnkdgskmapgirdcnlsdgvSNGgdAYdfVSDRTNVDKANMRGVEATFNWTISPE---WNLAANYTFTDTEQK 565
Cdd:PRK13528 557 DDVIGRT--------------------ASG--AY--ILQWQNGGKAVVEGLEGNLLVPLMKDrlnWNTNATYMITSEQKD 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 566 SGDfkgkPLNKQPRHMANATLNWETTPEMETWARINFRGKTSDYLARTSMSHGTP--------SYAFVDIGTSYSLTKQL 637
Cdd:PRK13528 613 TGN----PLSVIPKYTINSTLDWQITQALSANVNWTLYGKQKPRTHAESRSEETGglsgkelgAYSLVGVNVNYDINKNL 688
|
730 740 750
....*....|....*....|....*....|....*....
gi 1114044825 638 NVIGGVYNVLDRRIDQEH--FNTTLE-GRRYNIGLNYNF 673
Cdd:PRK13528 689 RLNVGVSNLFDKQIYREGegANTYNEpGRAYYAGVTASF 727
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
8-673 |
3.19e-71 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 244.07 E-value: 3.19e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 8 KIALGVVAAIASSFVMTATAEnVEKLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLV---TGGG 84
Cdd:COG4772 2 RRALAAALLLAAAAAAEAATT-LETVVVTGSRAAEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVqeeDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 85 SSSDISIRGMDAKYT---MILVDGKRVAsreTRPNSDNAGIEQgwlPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITR 161
Cdd:COG4772 81 LRPNIGIRGLGPRRSrgiTLLEDGIPIA---PAPYGDPAAYYF---PDLERMERIEVLRGAAALRYGPQTVGGAINFVTR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 162 KAQKEWNFSLRADSTiterkdSGNTNQGSFYAAGPlIDNvLGLKIQGQYSHRSEDKIVNGYNRQitaTGGGTLSWTPDEQ 241
Cdd:COG4772 155 TIPTAFGGELRVTGG------SFGYRRTHASVGGT-VGN-FGYLVEYSRKRGDGFRDNSGFDIN---DFNAKLGYRLSDR 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 242 NTIDFEFkkdnQHRDSRVwHSKSGL--------PSRGKAPESSFtDYELTHYALTHDgiYDFG-----TMNTYVQ----- 303
Cdd:COG4772 224 QELTLKF----QYYDEDA-NTPGGLtdaqfdadPRQSYRPADQF-DTRRTQLSLRYE--HQLSdnttlTTTAYYNdfsrn 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 304 ---RDESRNPSRKMDYDDTTVRNQTVL-----------MFG-DHTLSVGAQYRYEELKD-----------EGNKLKASNK 357
Cdd:COG4772 296 wyiRQNTADPNTPGLGLRGNPRGYRSYgieprlthrfeLGGvPHTLEVGLRYHREEEDRkqyvntygqgrSGAGLRRDRR 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 358 LDRYSWALFAEDEWAMTNDFALTGGLRM------------------DKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTGY 419
Cdd:COG4772 376 FSADALAAYAQNRFELTGRLTLTPGLRYehirrdrtdrystrtggdDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGF 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 420 RSPDLRQATASWGqgtgggnydaviyGNPSLKPEKSVTEEISIIWDNRENLTASLGLFNTDFKDKImevrrcdsrtnkdg 499
Cdd:COG4772 456 EPPTFGDLAYGNG-------------GNPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDNEL-------------- 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 500 skmapgirdcnLSDGVSNGGDaydfvSDRTNVDKANMRGVEATFNWTISPE----WNLAANYTFTDTEQKSG---DFKGK 572
Cdd:COG4772 509 -----------GSCSAAGGDR-----STFTNAGETRHQGLELALDYDLLKGgglgLPLFAAYTYTDAEFTSDfgpVFAGN 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 573 PLNKQPRHMANATLNWETtpemETW-ARINFR--GKT-SDYL-ARTSMSHG-TPSYAFVDIGTSYSLTKQLNVIGGVYNV 646
Cdd:COG4772 573 RLPYVPRHQLTAGLGYEH----GGWtANLNGRyvSEQfTDAAnTVADGSFGkIPSYTVLDLSASYDFGKNLSLFAGVNNL 648
|
730 740 750
....*....|....*....|....*....|....*..
gi 1114044825 647 LDRRidqeHFNTTL----------EGRRYNIGLNYNF 673
Cdd:COG4772 649 FDKR----YIASRApnyaagirpgPPRTVYAGLRLKF 681
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
35-673 |
4.52e-64 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 224.19 E-value: 4.52e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 35 VTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTGGGSSS--DISIRGMDAKYTMILVDGkrvasre 112
Cdd:TIGR01785 5 TVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPgqSINIRGLQDNRVLVVVDG------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 113 TRPNSDNAGIEQGWLPPLPA-IERIEVVRGPMSSLYGSDAMGGVINIITRKA----QKEWNFSLRADSTiteRKDSGNTN 187
Cdd:TIGR01785 78 ARQNYQRGGAHNGSLFVDPElLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAadllRPGQLFGGLAKLS---YGSNNNSF 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 188 QGSFYAAGPLIDNVLGLkIQGQYSHRSEDKIVNGYNRQITAT----GGGTLSWTPDEQNTIDFEFKKDNQHRD------- 256
Cdd:TIGR01785 155 GGSVAVAGRLDDNLDAL-VAATYRDGGNYRNGNKEEATNSAYvqknLLAKLGWQLDDAQRLEFSYFTTEGSLDeaqnsgp 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 257 --SRVWHSKSGLPSRGKAPESsftdYELTHYALTHDGIYDFGTMNTYVQRDESRN------PSRKMDYDDTT----VRNQ 324
Cdd:TIGR01785 234 gtEYVLGSSSTLLASSTRDRS----ATLTYNWTPEDNPWLDATASLYYNRTENDNdrsargVGREEGYQYTTygatLQNT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 325 TVLMFGDH-TLSVGAQYRYEELKDEGNKLKASNKL-------DRYSWALFAEDEWAMTND-FALTGGLRMDK-----DEN 390
Cdd:TIGR01785 310 SRFDVASWsTLTYGVDWMKDKRRTESFDPNSVTTIvpnppsaKEYFFGLFLQDNIPLLDDrLTLSAGLRYDHyklspKTT 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 391 FGT--------HWTPRVYGVWHLTDEWTLKGGVSTGYRSPD-LRQATASWGQGTGGGNYdavIYGNPSLKPEKSVTEEIS 461
Cdd:TIGR01785 390 ADTeavdrsysRWSPSLGLSYKPVDWLTLYASYSQGFRAPSiDELYGTGDHPGTPGGYT---FAPNPNLKPETSKTWELG 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 462 I------IWDNRENLTASLGLFNTDFKDKIMEVRrcdsrtnkdgskmapgIRDCNLSDGVSNggdAYDFVsdrtNVDKAN 535
Cdd:TIGR01785 467 AnlsfdnLLLDNDQLQFKVAYFYNDVKDFIDLTI----------------GVTDNVTAGMNN---ITQYV----NIDGAR 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 536 MRGVEATFNWTiSPEWNLAANYTFTDTEQKSgdfKGKPLNKQPRHMANATLNWETTPE-METWARINFRGKTSDYLARTS 614
Cdd:TIGR01785 524 IRGIEASASYD-AGLWATGLSYGYTIGKDQN---TNQWLSNIPPLKLVVTVGYRFPDRrLDLGAKAAYYERQSESPTTED 599
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1114044825 615 MSHG----TPSYAFVDIGTSYSLT--KQLNVIGGVYNVLDRRIdQEHFN--TTLEGRRYNIGLNYNF 673
Cdd:TIGR01785 600 VAANglltTPGYTVVDLYATYQPNavKGLTVRFGVNNLTDRKY-TPAQSvpGAGPGRNFKGSVKYQF 665
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
41-673 |
7.10e-61 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 215.13 E-value: 7.10e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 41 FKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVT--GGGSSSDISIRGMDAkYTMILVDGKRVASRETRPNSd 118
Cdd:COG4774 2 TDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGagEGGNGDSFSIRGFSA-SGDIYVDGLRDPGQYRRDTF- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 119 nagieqgwlpplpAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRAdstiteRKDSGNTNQGSFYAAGPLI 198
Cdd:COG4774 80 -------------NLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTL------TYGSDGQRRATLDVNGPLG 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 199 DNvLGLKIQGqySHRSEDKIVNGYNRQITAtGGGTLSWTPDEQN--TIDFEFKKDNQHRDSRVWHSKSGLPSRGKA---- 272
Cdd:COG4774 141 DD-LAYRLNG--MYRDSDSYRDGVDNDRWG-IAPSLTWRLGDRTrlTLDYEYQDDDRTPDYGVPAVANGRPVDVDRstfy 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 273 -PESSFTDYELTH--YALTHD-------------GIYDFGTMNTYVQRDE-----SRNPSRKmDYDDTTVRNQTVL---- 327
Cdd:COG4774 217 gQPDDYSDSETDSatLRLEHDfndnwtlrnalrySDYDRDYRNTYPTGGNatgtvTRSAYRR-DQDNDTLSNQTDLtgkf 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 328 MFG--DHTLSVGAQYRYEELKDEG------------------------NKLKASNKLDRYSWALFAEDEWAMTNDFALTG 381
Cdd:COG4774 296 DTGgvKHTLLAGVEYSREDSDNARysgggtaptvnlynpvygapvtgpTLGGADNDSRTDTTGLYLQDTISLTDRWSLLA 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 382 GLRMD----KDENFGT----------HWTPRVYGVWHLTDEWTLkggvstgYrspdlrqatASWGQG--TGGGNYDAVIY 445
Cdd:COG4774 376 GLRYDrfdtDYTDRTTgattssyddsAFSPRAGLVYKPTPNLSL-------Y---------ASYSTSfnPGGGAPSLSNA 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 446 GNPsLKPEKSVTEEISIIWD-NRENLTASLGLFNTDfkdkimevrrcdsRTNkdgskmapgIRdcnlsdgVSNGGDAYDF 524
Cdd:COG4774 440 GQA-LDPEKSRQYEVGVKWDlLDGRLSLTAALFRIE-------------KTN---------VR-------TTDPANPGVY 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 525 VsdrtNVDKANMRGVEATFNWTISPEWNLAANYTFTDTEQK---SGDFKGKPLNKQPRHMANATLNWETTPE-METWARI 600
Cdd:COG4774 490 V----QTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITksaNAANVGNRLPNVPRHSASLWTTYDLPLPgLTLGGGV 565
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1114044825 601 NFRGKTSDYLARTSMshgTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRR----IDQEHFNTTLEGRRYNIGLNYNF 673
Cdd:COG4774 566 RYVGSRYADAANTVK---LPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRyyasAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
24-673 |
6.71e-54 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 196.65 E-value: 6.71e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 24 TATAENVEKLLVT---TASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLV--TGGGSSSDISIRGMDAky 98
Cdd:COG4773 38 TGTAEGTGGYTAKsssTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVssYDGGGRDSFSIRGFSI-- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 99 TMILVDGKRVASRetrpnsdnagieQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRAdstit 178
Cdd:COG4773 116 DNYLRDGLPLGGF------------GGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSL----- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 179 eRKDSGNTNQGSFYAAGPLIDNV-LGLKIQGqySHRSEDKIVNGYNRQiTATGGGTLSWTPDEQNTIDFEFkkDNQHRDS 257
Cdd:COG4773 179 -SAGSWDTYRATADVGGPLNEDGtLRYRLNA--AYEDGDSFRDGVDNR-RTLIAPSLDWDLTDDTTLTLGA--EYQDDDS 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 258 RVWHSksGLPSRG---KAPESSFTD--------------YELTH-----------YALTHDGIYDFGTMNTYVQRDESRN 309
Cdd:COG4773 253 TGDRG--FLPLDGtllDLPRSTNLGepwdyydtetttlfAELEHrfnddwslranARYSDSDRDGRSAYAYGAPDAATGT 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 310 PSRKMDYDDTTVRNQTV-------LMFG--DHTLSVGAQYRYEELKDEGNKLKASN-------------------KLDRY 361
Cdd:COG4773 331 LTRYASARDGDSRSDSLdanlngkFETGglEHTLLVGADYSRYDSDSDSATAGTINiynpvygnlpepdfdasdtDTTTR 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 362 SWALFAEDEWAMTNDFALTGGLRMDKDENFG-------------THWTPRVYGVWHLTDEWTLkggvstgYrspdlrqat 428
Cdd:COG4773 411 QTGLYAQDQISLTDRLSLLLGGRYDWYETDStnrlggsttsyddSAFTPRAGLVYDLTPGLSL-------Y--------- 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 429 ASWGQGTGGGNYdAVIYGNPsLKPEKSVTEEISI---IWDNRenLTASLGLFntdfkdkimevrrcdsRTNKDgskmapg 505
Cdd:COG4773 475 ASYSESFEPQSG-ADNNGNP-LDPETGKQYEAGVkgeLFDGR--LNATLAVF----------------DITQK------- 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 506 irdcNLSDGVSNGGDAYdfvsdrTNVDKANMRGVEATFNWTISPEWNLAANYTFTDTEQKSGD--FKGKPLNKQPRHMAN 583
Cdd:COG4773 528 ----NVATTDPDNPNFY------VQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDAdaLEGKRLTNVPRHTAS 597
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 584 ATLNWE-TTPEMETW---ARINFRGKTSDYLARTSMshgTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRR----IDQEH 655
Cdd:COG4773 598 LWTTYRfPSGALKGLglgGGVRYVGERYGDAANTFT---LPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKyyasSGSRG 674
|
730
....*....|....*...
gi 1114044825 656 FNTTLEGRRYNIGLNYNF 673
Cdd:COG4773 675 YVYYGAPRNVRLSLSYKF 692
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
44-673 |
4.89e-53 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 194.55 E-value: 4.89e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 44 TVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTGGG--SSSDISIRGMDAKYTMILVDGKRVASRETRPNSDNAG 121
Cdd:TIGR01786 17 DLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGrgGSQGINIRGLDKNRVAVLVDGIRQNTSYGGQGSTFYA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 122 IEQgWLPPLpaIERIEVVRGPMSSLYGSDAMGGVINIITRKAQ------KEWNFSLRADStiterkdSGNTNQGSF-YAA 194
Cdd:TIGR01786 97 INS-IDPEL--IKSIEIVKGASSSLYGSGALGGVVAFRTKDAAdllkpgKDLGGLSKLGY-------SSANNRFTQsVAA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 195 GPLIDNVLGL-----KIQGQYSHRSEDKIVNGYNRQI-------TATGGGTLSWTPDEQNTIDFEFKKDNQHRDSRVWHS 262
Cdd:TIGR01786 167 AGRNDDVDALvqatyRRGHELKNGNKANIGNESKRSKpnpsdykSQSFLAKLGWQLNDAHRLGLSLEYTQTDYDEPEMTN 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 263 KSGLPSRGKA--------------------------PESSFTDYELTHYALTHDGIY-DFGTMNTYVQRDESRNPSRKMD 315
Cdd:TIGR01786 247 TSYLTKPLGApllsstvvlgdsktrdrrtgldyelnPDNSWLDTVKLALDKQYIQLYnYLNATSASDYPGVDKNGRYKDK 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 316 YDDTT----VRNQTVLMFGDHTLSVGAQYRYEELK--DEGNKLKASN-----------KLDRYSWALFAEDEWAMTNDFA 378
Cdd:TIGR01786 327 YDYYTlgfdTNNKIEFSVHSLSLTYGLDRFKDKVStgDSRRNLPTAAynlygyegenrPVKGSNFGLFLQDNIKLGDWLS 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 379 LTGGLRMD-----------KDENF----GTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDlrqATASWGQGTGGGNYDAV 443
Cdd:TIGR01786 407 LSAGLRYDhyktdpkadesKDYGAisktYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPS---FDELYGTGAHPGGGPYT 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 444 IYGNPSLKPEKSVTEEISIIWDNrENLTASLGLFNTDFKDKIMEVRRCDSRTNKDGskmapgirDCNLSDgvsnggdaYD 523
Cdd:TIGR01786 484 FLPNPNLKPETSKNWEIGINLHF-DQLDFKVSYFRNDYKDFIDLGIGVTAKGNMAQ--------VGSNTI--------TN 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 524 FVsdrtNVDKANMRGVEATFNWTISP--------EWNLAANYTftdteqKSGDFKGKP-LNKQPRHMANATLNWETtpEM 594
Cdd:TIGR01786 547 YV----NIDNARIRGIELSGRYDLGSffsgpdgwTTTLKYGYT------KGKDSDTNPwLNAITPLKVVLGLGYDH--PD 614
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 595 ETW---ARINFRGKTSDYLARTSMSHG----------TPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRR---------ID 652
Cdd:TIGR01786 615 EKWgvgLTLTFSGAKDAVDAYATYYENgeaakagplrTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDRKyttwesarqAG 694
|
730 740
....*....|....*....|.
gi 1114044825 653 QEHFNTTLEGRRYNIGLNYNF 673
Cdd:TIGR01786 695 PLATGYTAPGRNYKASVEYKF 715
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
220-672 |
7.18e-47 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 172.65 E-value: 7.18e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 220 NGYNRQITATGGGTLSWTPDEQNTIDFEFkkdnQHRDSRVWHSKSGLpsrgkapessFTDYELTHYALTHDGIYDFGTmN 299
Cdd:pfam00593 41 GGYLGDRPLYYGRDYSDTDRKRLSLGYDY----DLGDGLSWLSTLRL----------GLRYSSLDGDYTSNSSGLSGA-G 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 300 TYVQRDESRNPSRKMDYDDTTVRNQTVLMFGDHTLSVGAQYR------YEELKDEGNKLKASNKLDRYSWALFAEDEWAM 373
Cdd:pfam00593 106 DYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRrldddaYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 374 TNDFALTGGLRMDKDENFGT--------------HWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGgn 439
Cdd:pfam00593 186 TDRLTLTLGLRYDHYSTDGDdgngggdnfsrsysAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGG-- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 440 ydAVIYGNPSLKPEKSVTEEISIIWDNReNLTASLGLFNTDFKDKIMevrrcdsrtnkdgskmapgirdcNLSDGVSNGG 519
Cdd:pfam00593 264 --AVAGGNPDLKPETSDNYELGLKYDDG-RLSLSLALFYIDIKNLIT-----------------------SDPDGPGLGG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 520 DAYDFvsdrTNVDKANMRGVEATFNWTISPEWNLAANYTFTDTE-QKSGDFKGKPLNKQPRHMANATLNWEttPEMETW- 597
Cdd:pfam00593 318 TVYTY----TNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADdDADADDTGNPLPNVPRHTANLGLTYD--FPLGGWg 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 598 --ARINFRGKTSDYLARTSMSHGTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDQ-------EHFNTTLEGRRYNIG 668
Cdd:pfam00593 392 arLGARYVGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRyyssgggNLGGYPGPGRTFYLG 471
|
....
gi 1114044825 669 LNYN 672
Cdd:pfam00593 472 LSYK 475
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
10-673 |
8.25e-46 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 172.36 E-value: 8.25e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 10 ALGVVAAIASSfvmtATAENVEKLLVTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVT---GGGSS 86
Cdd:TIGR01779 11 ASLLTLCSALH----ANEAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAqngGRGQN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 87 SDISIRGMDAKYTMILVDGKRVASretrPNSDNAGIEQgwlPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKE 166
Cdd:TIGR01779 87 TSLFLRGTESDHVLVLIDGIRFGS----AAAGAADFQQ---LPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 167 wnfslrADSTITERKDSGNTNQGSFYAAGPLIDNvlglkiqGQYSHRSEDKIVNGYNrqitATGGGTLSWTPDEQNtidf 246
Cdd:TIGR01779 160 ------QGTTLSAGLGSLDYQEYSIASGVAIGEN-------GWYSVALGTESTKGIN----VRPGGPGVYDPDRDG---- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 247 eFKKDN-----QHRDSRVWHsksgLPSRGKAPESSfTDYELTHYalthdGIYDFGTMNTYVQ-------RDESRNPS--- 311
Cdd:TIGR01779 219 -FRSDSlllggGHRFDESWS----LFVNALRYENR-NDYDNYSF-----GTRLYKEAEKGDQsftggrqRQSERDVSelt 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 312 ----RKMDYDDT----------------TVRNQTVLMFGD-HTLSVGAQYRYEELKDeGNKLKASNKLDRYSWALFAEdE 370
Cdd:TIGR01779 288 lstgKSKDWDYAyskgrysstsdtreqrNIQWQNDLLVGDgWVLAGGVDWQKDSIIS-STADKEDDRSNTAAFAQVLQ-Q 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 371 WAmtnDFALTGGLRMDKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQAtaswgqgtgggnYDAViYGNPSL 450
Cdd:TIGR01779 366 WG---QQLLEASLRRDDNQQFGSHTTGSIAWGYQFIEELRFTASYGTAFKAPNLNQL------------YYPS-YGNPNL 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 451 KPEKSVTEEISIiwdnrENLTASLGLFNTDFKDKIMEVRRCDSRTNKdgskmapgirdcnlsdgvsnggdaydfvsDRTN 530
Cdd:TIGR01779 430 QPETSKSAELGF-----YGLFSGGKWSISGYRTKINDLIDYDSHPKG-----------------------------YPNN 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 531 VDKANMRGVEATFNWTISPeWNLAANYTFTDTEQKSgdfKGKPLNKQPRHMANATLNWETtpEMETW-ARINFRGKTSDY 609
Cdd:TIGR01779 476 IGEARIKGVEATAEFATGG-WTHQLSVDLLDAQNVN---TGNTLPRRARQMYKWNADRAF--EQFDWgASYQYVGKRYDD 549
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1114044825 610 LARTSMSHGTP--SYAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDQEHFNTTlEGRRYNIGLNYNF 673
Cdd:TIGR01779 550 DYNTYPTQNVRlgGYSLLDLRVSYYVTDSWTVQGRIANLFDKDYETAYGYPQ-AGRAYYLSIRYQF 614
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
47-673 |
3.78e-45 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 171.06 E-value: 3.78e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 47 DAPASVSVVTREQLETKSYRDVTDALKDVPGVLVTGGGSSSD---ISIRGMDAK--YTMILVDGKRVASRETRPNSDnag 121
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQfgnITIRGFGLEvdIDNVYLDGVPLLSRGNLAIVD--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 122 ieqgwlpplPA-IERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRADStiterkDSGNTNQGSFYAAGPLI-D 199
Cdd:TIGR01783 78 ---------PAmVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGA------GTRSGYRTAFDLGGPLGaD 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 200 NVLGLKIQGQYshRSEDKIVNGYNRQITAtGGGTLSWTPDEQ--NTIDFEFKKDNQHRDSRVW-HSKSGLPSR------- 269
Cdd:TIGR01783 143 GTFRGRLNGAR--QDGDSFYDGAGEETRL-GATATDWQLDDRtlLRLGAYYQKERDRGGYGGLpASGGTSGRDlssdryl 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 270 GKAPESSFTDYELTHYALTHDGIYD-------------FGTMNTYVQRDESRNPSRKMDYDDTTV-----RNQTVLMFG- 330
Cdd:TIGR01783 220 GTSSNRNYDDREYLSYGLSLEYQFNdvwtgkqnlrysyFDTDSNQVQASGYSSDGGLFGRSLTVVnvkqdRVQIDAGLDg 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 331 -------DHTLSVGAQYRY-------------EELKDEGNKLKAS---------NKLDRYSWAL--FAEDEWAMTNDFAL 379
Cdd:TIGR01783 300 efetgpiEHDLLLGVSYGQrttnrfnntgypsDNIYSLTATSSARtdigdspkdRALSSTTKALngVALQRILLADKWTL 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 380 TGGLRMDK-------------DENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPdlrqATASWGQGTGGGNydaviyg 446
Cdd:TIGR01783 380 TLGGRYDSvdvksnngvagstGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPG----GYYPKGAGNSGDI------- 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 447 npsLKPEKSVTEEISIIWDNRENLTASLGLFNTDFKDKIMEvrrcdsrtnkdgskmapgirdcnlsdgVSNGGDAYdfvs 526
Cdd:TIGR01783 449 ---LEPEKGKNYELGVRYDLGDSLLATAALFRITKDNQLVQ---------------------------DPVNGTFS---- 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 527 drTNVDKANMRGVEATFNWTISPEWNLAANYTFTD---TEQKSGDFKGKPLNKQPRHMANATLNWETTP---EMETWARI 600
Cdd:TIGR01783 495 --VNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDaefTEDTNGDTQGNTVPFVPKHTASLWASYAPPVgdnGLTLGGGV 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 601 NFRGKTSDYLARTSmshGTPSYAFVDIGTSYSLTKQ--LNVIGGVYNVLDRRIDQEHFNTTL-------EGRRYNIGLNY 671
Cdd:TIGR01783 573 QYTGKAYVDGGNTG---KVPSYTVVDLSVRYDLTKKknLTLALNVNNLFDRDYYTSGYRWGPsayiypgAPRTVGLSVSY 649
|
..
gi 1114044825 672 NF 673
Cdd:TIGR01783 650 DF 651
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
35-309 |
2.66e-42 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 154.26 E-value: 2.66e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 35 VTTASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLVT---GGGSSSDISIRGMDAKYTMILVDGKRVasr 111
Cdd:COG4206 2 VVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSssgGPGSAASISIRGLGSNQTLVLIDGVPL--- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 112 etrpNSDNAGIEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKEWNFSLRADSTiterkdSGNTNQGSF 191
Cdd:COG4206 79 ----NDPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYG------SFGTRRLSA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 192 YAAGPLIDNVLGLKIQGQYS--HRSEDKIVNGYNRQITATGGGTLSWTPDEQNTIDFEF---KKDNQHRDSRVWHSKSGL 266
Cdd:COG4206 149 SLSGGAGKFSYSLSASYRRSdgYRYNDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGgysDSERGYPGAVGSDRNLRL 228
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1114044825 267 PSRGKAPESSFTDYELTHYALTHDGIYDFGTMNTYVQRDESRN 309
Cdd:COG4206 229 SLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
7-673 |
1.52e-38 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 151.30 E-value: 1.52e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 7 NKIALgVVAAIASSFVMTATAENVEKLLVTtASGFKQTVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLV--TGG- 83
Cdd:PRK10641 3 KKASL-LTALSVTAFSGWAQDTSPDTLVVT-ANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIaqNGGl 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 84 GSSSDISIRGMDAKYTMILVDGKRVASRETRPNSDNAGIeqgwlpPLPAIERIEVVRGPMSSLYGSDAMGGVINIITRKA 163
Cdd:PRK10641 81 GQLSSLFIRGTNSSHVLVLIDGVRLNQAGISGSADLSQI------PISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRD 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 164 QK--------------EWNFSLR---ADSTITERKDSGNTNQG--------SFYAAGPLIDNVLGLKIQGQYSHRSEDKI 218
Cdd:PRK10641 155 KPgttlsagwgsngyqNYDGSTQqqlGDNTRVTLAGDYTYTKGfdvvaygnTGTQAQPDRDGFMSKTLWGGLEHQFNDQW 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 219 ---VNGY---NRQITATGGGTLSWTPDEQntidfefKKDNQHRDSRVWHSKSGLPSRGKAPESSFTDYELTHyaltHDGI 292
Cdd:PRK10641 235 sgfVRGYgydNRTDYDAYYSPGSPLIDTR-------QLYSQSWDAGLRYNGGIYSSQLIASYSHSKDYNYDP----HYGR 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 293 YDFGTmntyvqrdesrnpsrkmDYDDTTVRN---QTVLMFGDHTLSVGAQYRYEELKDEGNKLkaSNKLDRYSWALFAED 369
Cdd:PRK10641 304 YDSSA-----------------TLDDMKQYNvqwGNTVQVGHGNISAGVDWQKQTTTPGTGYV--PDGYDQRNTGIYLTG 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 370 EWAMtNDFALTGGLRMDKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLrqataswGQGTGggnydavIYGNPS 449
Cdd:PRK10641 365 QQQI-GDVTLEGAARSDDNSQFGWHGTWQTSAGWEFIDGYRFIASYGTAFKAPNL-------GQLYG-------FYGNPN 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 450 LKPEKSVTEEISIiwdnrENLTASLGLFNTDFKDKIMevrrcdsrtnkdgskmapgirdcNLSDGVSNGGDAYdfvsdrt 529
Cdd:PRK10641 430 LKPEESKQWEGGF-----EGLTGPVNWRLSGYRNDID-----------------------NLIDYDDHTLKYY------- 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 530 NVDKANMRGVEATFNWTISPewnLAANYTFTDTEQKSGDfKGKPLNKQPRHMANATLNWETTP-EME-TWARINFRGKTs 607
Cdd:PRK10641 475 NVGKATIKGVEWTGNFDTGP---LTHQVTLDYVDPRNAI-TDEPLARRAKQQVKYQLDWQLYDfDWGvTYQYLGTRYDK- 549
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1114044825 608 DYLARTSMSHGTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRriDQEH---FNTTleGRRYNIGLNYNF 673
Cdd:PRK10641 550 DYSTYPYQTVKLGGVSLWDLAVSYPVTSHLTVRGKIANLFDK--DYETvygYQTA--GREYTLSGSYTF 614
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
44-155 |
1.20e-30 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 115.83 E-value: 1.20e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 44 TVEDAPASVSVVTREQLETKSYRDVTDALKDVPGVLV--TGGGSSSDISIRGMDAKYTMILVDGKRVasretrpNSDNAG 121
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVssGGGGGGSSISIRGFGSNRVLVLVDGVPL-------NSGGGG 73
|
90 100 110
....*....|....*....|....*....|....
gi 1114044825 122 IEQGWLPPLPAIERIEVVRGPMSSLYGSDAMGGV 155
Cdd:pfam07715 74 SVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
393-673 |
1.82e-20 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 96.25 E-value: 1.82e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 393 THWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQ--ATASWGQGTGGGNYDAVIyGNPSLKPEKSVTEEISIIWDNRENL 470
Cdd:TIGR01782 563 TDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDlaANTSLSDDGTGGTVTVSG-GNPDLKPYESDNLDLSLEWYFGPGG 641
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 471 TASLGLFNTDFKDKIMEVRRCDSRTNKDGSKmapgirdcnlSDGVSnggdaydfVSDRTNVDKA-NMRGVEATF--NWTI 547
Cdd:TIGR01782 642 LLSAAVFYKDIKNFIVTTTSTETNDGGGGLV----------VAGVL--------VSRPVNGGKAgKIRGVELGYqqTFDF 703
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 548 SPEW----NLAANYTFTDTE----QKSGDFKGKPLNKQPRHMANATLNWETTPeMETWARINFRGK---TSDYLARTSMS 616
Cdd:TIGR01782 704 LPGPlsgfGVQANYTYVDSEadpsVDGVQRRKLPLPGLSKNTANATLYYEKGG-FSARLSYNYRSDyllDVGGSNINRLD 782
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1114044825 617 HGTPSYAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDQEH------FNTTLEGRRYNIGLNYNF 673
Cdd:TIGR01782 783 RYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTggkqrpREYVETGRTYMLGLRYKF 845
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
8-582 |
1.56e-15 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 80.57 E-value: 1.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 8 KIALGVVAAIA--SSFVMTATAENVEKLLVTTASGFKQT----------------------VEDAPASVSVVTREQLETK 63
Cdd:PRK10044 15 KIAVVVATAVSgmSVYAQAAVEPKEETITVTAAPAPQESawgpaatiaakrsatgtktdtpIEKTPQSISVVTAEEMALH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 64 SYRDVTDALKDVPGVLVTGGGSSSDI---SIRGMDAK--YTMILVDGKRVASRetrpNSDNAGIEQGWLpplpaiERIEV 138
Cdd:PRK10044 95 QPKSVKEALSYTPGVSVGTRGASNTYdhlIIRGFAASgqSQNNYLDGLKLQGN----FYNDAVIDPYML------ERAEL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 139 VRGPMSSLYGSDAMGGVINIITRKAQ----KEWNFSLRADstiterkdsgNTNQGSFYAAGPLIDNvlglkiqGQYSHR- 213
Cdd:PRK10044 165 MRGPVSVLYGKSNPGGLLNMVSKRPTteplKEVQFKMGTD----------NLFQTGFDFSDALDDD-------GVYSYRl 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 214 -----SEDKIVNGyNRQITATGGGTLSWTPDEQNTIDF--EFKKDNQhRDSRVWHSKSG----LPSRGKAPeSSFTDYEL 282
Cdd:PRK10044 228 tglarSANAQQKG-SEEQRYAIAPSFTWRPDDKTNFTFlsYFQNEPE-TGYYGWLPKEGtvepLPNGKRLP-TDFNEGAK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 283 ThyalthdgiydfgtmNTYvqrdeSRNpsRKM-------DYDDT-TVRNQtvLMFGDHTLSVGAQYRYEELKDEGNKLKA 354
Cdd:PRK10044 305 N---------------NTY-----SRN--EKMvgysfdhEFNDTfTVRQN--LRYAENKTSQRSVYGYGVCSDKGHYLNR 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 355 SNKLDRYSWALFAEDEWAMtNDFA--------LTG----GLRMDKDENFGTHWTPRVYGVWHLTDEWTLKGGVSTGYRSP 422
Cdd:PRK10044 361 GYVVDDEKLQNFSVDTQLQ-SKFAtgdvdhtlLTGvdfmRMRNDINAWFGYADSVPLLNLYGPVNTDFDFNANSGPYQIL 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 423 DLRQAT-------ASWGQG--TGGGNYDAV-------IYGNPSLKPEKSVTEE--ISIIWDN--------RENLTASLGl 476
Cdd:PRK10044 440 NKQKQTglyvqdqAEWDKWlvTLGGRYDWAdqsslnrVNGTTDKRDDKQFTWRggVNYLFDNgitpyfsySESFEPSSG- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 477 fnTDFKDKIMEVRRcdSRTNKDGSKMAPGIRDCNLSDGVSNGGDAYDFVSDRTNV------DKANMRGVEATFNWTISPE 550
Cdd:PRK10044 519 --TGKDGNIFAPSK--GKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSffsvqgGEIRARGVELEAKAALSAN 594
|
650 660 670
....*....|....*....|....*....|...
gi 1114044825 551 WNLAANYTFTDTE-QKSGDFKGKPLNKQPRHMA 582
Cdd:PRK10044 595 VNVTGSYTYTDAEyTTDTTYKGNTPAQVPKHMA 627
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
7-649 |
1.43e-10 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 64.44 E-value: 1.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 7 NKIALGVVAAIASSFVMTATAENVEKLLVTT----------------ASG-FKQTVEDAPASVSVVTREQLETKSYRDVT 69
Cdd:PRK09840 13 HSLAFFAGLCIGITPVAQALAAEGQTNADDTlvveastpslyapdqsADPkFSQPLADTTQTITVISEQVIKDQGATNLT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 70 DALKDVPGVLV-----TGGGSSSD-ISIRGMDAKYTmILVDGKRVASRETRpnsDNAGIEQgwlpplpaierIEVVRGPM 143
Cdd:PRK09840 93 EALRNVPGVGTffageNGNTTTGDaIYMRGFDTSNS-IYVDGIRDIGSISR---DTFNTEQ-----------VEVIKGPS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 144 SSLYGSDAMGGVINIITRKAqkewnfslRADSTITerkDSGNTNQGSFYAAGPLIDNVLG------LKIQGQYSHRS-ED 216
Cdd:PRK09840 158 GTDYGRSAPTGSINMISKQP--------RNDSGID---ASASIGSAWFRRGTLDVNQVIGdttavrLNVMGEKTHDAgRD 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 217 KIVNgyNRQITATgggTLSWTPDEQNTIDFEFKKDNQHR--DSRVwhSKSGLPSRgKAPESSFTDYELTHYALTH----- 289
Cdd:PRK09840 227 KVKN--ERYGVAP---SVAFGLGTANRLYLNYLHVTQNNtpDGGI--PTIGLPGY-SAPSAGRAALNHAGKVDTHnfygt 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 290 DGIYDFGTMNTYVQRDES--------RNPSR----KMDYDDTTVR----------------------------------N 323
Cdd:PRK09840 299 DSDYDDSTTDTATMRFEHdindnttlRNTTRwsrvKQDYLLTAIMggasnittptpsdvntwtwsrtantkdvsnkiltN 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 324 QTVLMFG------DHTLSVGAQYRYEELKDEG---NKLKASN------KLDRYSW--------------ALFAEDEWAMT 374
Cdd:PRK09840 379 QTNLTSTfytgsiGHDVSTGVEFTRETQTNYGvnpVTLPAVNlyhpdsSIHPGGLtrnganangqtdtfAIYAFDTLQLT 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 375 NDFALTGGLRMDkdeNFGTHWTPRVYGVWHLTDEWTLKGGVSTGyrSPDLRQATA------SWGQGT------------- 435
Cdd:PRK09840 459 RDWELNGGIRLD---NYHTEYDSATACGGSGRGAITCPAGVAKG--SPVTTVDTAksgnlvNWKAGAlykltengnvyin 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 436 --------GGGNYDAVIYG------NPSLKPEKSVTEEISIIW---DNRENLTASlgLFNTDFKDKIMevrrcdsrTNKD 498
Cdd:PRK09840 534 yavsqqppGGSNFALAQSGsgnsanRTDFKPQKANTSEIGTKWqvlDKRLLLTAA--LFRTDIENEVE--------QNDD 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 499 GskmapgirdcnlsdGVSNGGdaydfvsdrtnvdKANMRGVEATFNWTISPEWNLAANYTFTDTEQKSGDFKGK----PL 574
Cdd:PRK09840 604 G--------------TYSQYG-------------KKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNGKDVAQdgssSL 656
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 575 NKQPRHMANATLNWETTPEMETWARINFRGKtsdyLAR-TSMSHGTP----SYAFVDIGTSYSLTKQLNVIGGVYNVLDR 649
Cdd:PRK09840 657 PYTPEHAFTLWSQYQATDDLSVGGGARYIGS----MHRgSDGAVGTPafteGYWVADAKLGYRVNRNLDLQLNVYNLFDT 732
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
36-166 |
1.85e-10 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 64.05 E-value: 1.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 36 TTASGFKQTVEDAPASVSVVTREQLETKSYRD-VTDALKDVPGVLVTGGGSSSDIS---IRGMDAKYTMILVDGKRVASr 111
Cdd:PRK14050 67 ATGSKTDTPITEIPQSVSVVGRQEMDDRGVTNkVDEALRYTPGVLSQPFGTDGDTDwfyIRGFDATQTGVFLDGLNLFS- 145
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1114044825 112 etrpnsdnAGIEQGWLPPLpAIERIEVVRGPMSSLYGSDAMGGVINIITRKAQKE 166
Cdd:PRK14050 146 --------YGFGGFQIDPF-MLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDE 191
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
10-166 |
2.25e-10 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 63.77 E-value: 2.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 10 ALGVVAAIASSFVMTATAEN-----VEKLLVTTASGFKQTVE------------------DAPASVSVVTREQLETKSYR 66
Cdd:PRK14049 18 ALALVATAQAQDAGQESVSNeastaLETLVVNGGSGGVITADgyvatssatgakvdtpflETPQSISSVTEQQLKDRNPQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 67 DVTDALKDVPGVLVTGGGSSS---DISIRGMDAKYTMILVDGKRvasretRPNSDNAgieqgWLPPLP-AIERIEVVRGP 142
Cdd:PRK14049 98 TLLETLAYTPGARVGAFGFDPrfdAFFVRGFDVTYTGVFRDNLR------QPGASSS-----IFKTEPyGLEGVSILRGP 166
|
170 180
....*....|....*....|....
gi 1114044825 143 MSSLYGSDAMGGVINIITRKAQKE 166
Cdd:PRK14049 167 SSALYGASGAGGLFNLITKRPTEE 190
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
443-671 |
9.91e-07 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 51.51 E-value: 9.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 443 VIYGNPSLKPEKSVTEEISIIWDNreNLTASLGLFNTdfKDKIMEVRRCDSRTNKdgskmapgirdcnlsdgvsnggday 522
Cdd:pfam14905 205 YSQGNPNLKPEYTNSFELGYTYKW--KLSLSLSYRYT--NDVIQQTFITDDNDNV------------------------- 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 523 dFVSDRTNVDKANMRGVEATFNWTISPEWNLAANYTFTDTEQKSGDFKGKPLNkQPRHMANATLNWETTPEMETWARINF 602
Cdd:pfam14905 256 -TYTTYENLGKSNSYGLELSASFNPTKWWSLNGNLNGYYNKYKIDGSLNSDFS-NFGFNWNLNNTFTLPKGWSLQLNGNY 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 603 RGKTSDYLARTSmshgtpSYAFVDIGTSYS-LTKQLNVIGGVYNVLDRRIDQE----------HFNTTLEGRRYNIGLNY 671
Cdd:pfam14905 334 RSPRVTGQGKIK------PFYSLDLGLSKSfLKKKLTLSLNVNDIFNTRKFRSttnydngfiqSYNNKWDSRSVRLSLSY 407
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
374-673 |
8.41e-05 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 46.01 E-value: 8.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 374 TNDFALTGGLRMDKDenfgtHWTPRVYGVWHLTDEWTLKGGVSTGYRSPDLRQATASWGQGTGGGNYDAviygnpSLKPE 453
Cdd:PRK10003 476 TNWRVDTLTYSMEKN-----HTTPYAGLVYDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYEL------GLKSD 544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 454 ksvteeisiiWDNrENLTASLGLFntdfkdKIMEvrrcDSRTNKDGSKMaPGirdcnlsdgvSNGGDAYDfvsdrtNVDK 533
Cdd:PRK10003 545 ----------WMN-SRLTTTLAIF------RIEQ----DNVAQSTGTPI-PG----------SNGETAYK------AVDG 586
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114044825 534 ANMRGVEATFNWTISPEWNLaanyTFTDTEQKSGDFKGKPLN-KQPRHMANATLNWE--TTPEMETWARINFRGKT-SDY 609
Cdd:PRK10003 587 TVSKGVEFELNGAITDNWQL----TFGATRYIAEDNEGNAVNpNLPRTTVKLFTRYRlpVMPELTVGGGVNWQNRVyTDT 662
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1114044825 610 LARTSMSHGTP-SYAFVDIGTSYSLTKQLNVIGGVYNVLDRRIDqehfnTTLEG-------RRYNIGLNYNF 673
Cdd:PRK10003 663 VTPYGTFRAEQgSYALVDLFTRYQVTKNFSVQGNVNNLFDKTYD-----TNVEGsivygapRNFSITATYQF 729
|
|
| |
