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Conserved domains on  [gi|1114032884|ref|WP_072051083|]
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MULTISPECIES: tlde1 domain-containing protein [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2778 super family cl12489
Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.
 24-101 4.47e-17

Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.


The actual alignment was detected with superfamily member pfam10908:

Pssm-ID: 431533  Cd Length: 120  Bit Score: 71.26  E-value: 4.47e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114032884  24 YAGASGYKNDPSQECVKNSGPLPRGTYTIGSPHNSAHTGKYT------------LSLTPYST-NDMCGRDSFKIHGkSSL 90
Cdd:pfam10908   6 FSGNGAYRNDPRCVAVKNVGPIPPGTYYIVDRESGGHLGPIRdprsewfalyraDRLIDDWTfINGVGRGGFRLHP-YML 84

                          90
                  ....*....|.
gi 1114032884  91 HPDDSSEGCII 101
Cdd:pfam10908  85 GPRGDSNGCIT 95
 
Name Accession Description Interval E-value
DUF2778 pfam10908
Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.
 24-101 4.47e-17

Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.


Pssm-ID: 431533  Cd Length: 120  Bit Score: 71.26  E-value: 4.47e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114032884  24 YAGASGYKNDPSQECVKNSGPLPRGTYTIGSPHNSAHTGKYT------------LSLTPYST-NDMCGRDSFKIHGkSSL 90
Cdd:pfam10908   6 FSGNGAYRNDPRCVAVKNVGPIPPGTYYIVDRESGGHLGPIRdprsewfalyraDRLIDDWTfINGVGRGGFRLHP-YML 84

                          90
                  ....*....|.
gi 1114032884  91 HPDDSSEGCII 101
Cdd:pfam10908  85 GPRGDSNGCIT 95
 
Name Accession Description Interval E-value
DUF2778 pfam10908
Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.
 24-101 4.47e-17

Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.


Pssm-ID: 431533  Cd Length: 120  Bit Score: 71.26  E-value: 4.47e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1114032884  24 YAGASGYKNDPSQECVKNSGPLPRGTYTIGSPHNSAHTGKYT------------LSLTPYST-NDMCGRDSFKIHGkSSL 90
Cdd:pfam10908   6 FSGNGAYRNDPRCVAVKNVGPIPPGTYYIVDRESGGHLGPIRdprsewfalyraDRLIDDWTfINGVGRGGFRLHP-YML 84

                          90
                  ....*....|.
gi 1114032884  91 HPDDSSEGCII 101
Cdd:pfam10908  85 GPRGDSNGCIT 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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