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Conserved domains on  [gi|1096007219|ref|WP_071162294|]
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RaxX family RiPP [Xanthomonas oryzae]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RaxX_RiPP NF038382
RaxX family RiPP; RaxX (Required for Activation of XA21-mediated immunity X), produced by many ...
1-58 3.60e-23

RaxX family RiPP; RaxX (Required for Activation of XA21-mediated immunity X), produced by many strains of Xanthomonas, is a RiPP microbial peptide family. Characterized members have a sulfated tyrosine and interact with the rice immune receptor XA21.


:

Pssm-ID: 439675  Cd Length: 58  Bit Score: 82.15  E-value: 3.60e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 1096007219  1 MNLLKKSPTKGAASLQRPAGAKGRPEPLDQRLWKHVGGGDYPPSGPNTKHDPPPPNNG 58
Cdd:NF038382   1 MNLLNKSPANGARSLQREAGAKGRLEPLDERLWKHVGGGDYPPPGPNTRHDPPPPGNG 58
 
Name Accession Description Interval E-value
RaxX_RiPP NF038382
RaxX family RiPP; RaxX (Required for Activation of XA21-mediated immunity X), produced by many ...
1-58 3.60e-23

RaxX family RiPP; RaxX (Required for Activation of XA21-mediated immunity X), produced by many strains of Xanthomonas, is a RiPP microbial peptide family. Characterized members have a sulfated tyrosine and interact with the rice immune receptor XA21.


Pssm-ID: 439675  Cd Length: 58  Bit Score: 82.15  E-value: 3.60e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 1096007219  1 MNLLKKSPTKGAASLQRPAGAKGRPEPLDQRLWKHVGGGDYPPSGPNTKHDPPPPNNG 58
Cdd:NF038382   1 MNLLNKSPANGARSLQREAGAKGRLEPLDERLWKHVGGGDYPPPGPNTRHDPPPPGNG 58
 
Name Accession Description Interval E-value
RaxX_RiPP NF038382
RaxX family RiPP; RaxX (Required for Activation of XA21-mediated immunity X), produced by many ...
1-58 3.60e-23

RaxX family RiPP; RaxX (Required for Activation of XA21-mediated immunity X), produced by many strains of Xanthomonas, is a RiPP microbial peptide family. Characterized members have a sulfated tyrosine and interact with the rice immune receptor XA21.


Pssm-ID: 439675  Cd Length: 58  Bit Score: 82.15  E-value: 3.60e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 1096007219  1 MNLLKKSPTKGAASLQRPAGAKGRPEPLDQRLWKHVGGGDYPPSGPNTKHDPPPPNNG 58
Cdd:NF038382   1 MNLLNKSPANGARSLQREAGAKGRLEPLDERLWKHVGGGDYPPPGPNTRHDPPPPGNG 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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