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Conserved domains on  [gi|1051682263|ref|WP_065924017|]
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MULTISPECIES: type III secretion system HrpP C-terminal domain-containing protein [Pseudomonas]

Protein Classification

type III secretion system HrpP C-terminal domain-containing protein( domain architecture ID 13024613)

type III secretion system (T3SS) HrpP C-terminal domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
T3SS_HrpP_C cd17468
C-terminal domain of type III secretion protein HrpP and similar domains; This subfamily ...
 61-148 6.24e-31

C-terminal domain of type III secretion protein HrpP and similar domains; This subfamily contains Pseudomonas syringae HrpP, a type III secretion system (T3SS) substrate specificity switch-domain protein that has has an atypical T3SS translocation signal. HrpP is required for the export of pathogenicity factors into plant cells. HrpP contains a C-terminal domain similar to the globular C-terminal substrate-switching (SS) domain, also called the type III secretion substrate specificity switch (T3S4) domain, of Yersinia pestis YscP.


:

Pssm-ID: 350656  Cd Length: 89  Bit Score: 106.48  E-value: 6.24e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051682263  61 AGIALIEALAEQLAPRVQAASQWPLQAVLYLPRLGRINASVRREQGAWTIELEAEQDATARWLCGVRQQCEGRFAGALGL 140
Cdd:cd17468     1 AAAALWQALIEQLAPRLPAQAQWPLQFTLLLPRLGRVDVRARRRPGGWDIELRFERADTLQWLRGQRQRCQRRLSRALGQ 80


                  ....*...
gi 1051682263 141 PVNLLMPS 148
Cdd:cd17468    81 PVRLRLEQ 88
 
Name Accession Description Interval E-value
T3SS_HrpP_C cd17468
C-terminal domain of type III secretion protein HrpP and similar domains; This subfamily ...
 61-148 6.24e-31

C-terminal domain of type III secretion protein HrpP and similar domains; This subfamily contains Pseudomonas syringae HrpP, a type III secretion system (T3SS) substrate specificity switch-domain protein that has has an atypical T3SS translocation signal. HrpP is required for the export of pathogenicity factors into plant cells. HrpP contains a C-terminal domain similar to the globular C-terminal substrate-switching (SS) domain, also called the type III secretion substrate specificity switch (T3S4) domain, of Yersinia pestis YscP.


Pssm-ID: 350656  Cd Length: 89  Bit Score: 106.48  E-value: 6.24e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051682263  61 AGIALIEALAEQLAPRVQAASQWPLQAVLYLPRLGRINASVRREQGAWTIELEAEQDATARWLCGVRQQCEGRFAGALGL 140
Cdd:cd17468     1 AAAALWQALIEQLAPRLPAQAQWPLQFTLLLPRLGRVDVRARRRPGGWDIELRFERADTLQWLRGQRQRCQRRLSRALGQ 80


                  ....*...
gi 1051682263 141 PVNLLMPS 148
Cdd:cd17468    81 PVRLRLEQ 88
 
Name Accession Description Interval E-value
T3SS_HrpP_C cd17468
C-terminal domain of type III secretion protein HrpP and similar domains; This subfamily ...
 61-148 6.24e-31

C-terminal domain of type III secretion protein HrpP and similar domains; This subfamily contains Pseudomonas syringae HrpP, a type III secretion system (T3SS) substrate specificity switch-domain protein that has has an atypical T3SS translocation signal. HrpP is required for the export of pathogenicity factors into plant cells. HrpP contains a C-terminal domain similar to the globular C-terminal substrate-switching (SS) domain, also called the type III secretion substrate specificity switch (T3S4) domain, of Yersinia pestis YscP.


Pssm-ID: 350656  Cd Length: 89  Bit Score: 106.48  E-value: 6.24e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051682263  61 AGIALIEALAEQLAPRVQAASQWPLQAVLYLPRLGRINASVRREQGAWTIELEAEQDATARWLCGVRQQCEGRFAGALGL 140
Cdd:cd17468     1 AAAALWQALIEQLAPRLPAQAQWPLQFTLLLPRLGRVDVRARRRPGGWDIELRFERADTLQWLRGQRQRCQRRLSRALGQ 80


                  ....*...
gi 1051682263 141 PVNLLMPS 148
Cdd:cd17468    81 PVRLRLEQ 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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