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autotransporter outer membrane beta-barrel domain-containing protein [Escherichia coli]
Protein Classification
PL1_Passenger_AT domain-containing protein ( domain architecture ID 13503335 )
PL1_Passenger_AT domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
autotrans_barl
TIGR01414 outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
512-955
8.21e-78
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273608 [Multi-domain]
Cd Length: 431
Bit Score: 260.78
E-value: 8.21e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 512 TA G T F T TL N V EN L - S GN ST F I M RA D V vgeg N G V N NKG D L L NIS G SSA G NHVLAIR N Q G S E ATTGNEVL T V V KT - TDGT A S 589
Cdd:TIGR01414 1 PG G A F N TL T V NG L y T GN GG F V M NT D L ---- G G D N SQT D R L VVN G NAS G TTGVVVN N I G G E GAQTGDGI T L V TV n GGSD A A 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 590 F SAS - SQ V EL G G Y L Y DVR KNGT ---- NW E L YA S GT vpeptpnpeptpap AQP P IVNPDPTPAP A P tpkptttad AG GNYL 664
Cdd:TIGR01414 77 F TLA n GK V DA G A Y T Y TLY KNGT ednn NW Y L TS S LP -------------- DLT P PGQQLSPTYR A E --------- AG SYAA 133
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 665 N VGYL L NYV E NR TL M QRMGDLR NQSK D GN -- I W L R SY GG SLDSFASGKLS G F D MGYS G I Q F GGD KR L S -- DEMP L Y VGL Y 740
Cdd:TIGR01414 134 N ANAA L FLA E LD TL R QRMGDLR SAAR D AG ng V W A R IF GG DNHLDGDAGAA G Y D QNTT G V Q L GGD IL L A gn ADGD L H VGL M 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 741 I G STH A SPDYS ---- GG D G TARSDYM G M Y ASYMAHN G F Y S D L V VKA SR QK N SFHVLD S q N NG V NANGTAK G MSI SLEAG Q 816
Cdd:TIGR01414 214 A G YAK A DIKTR syky GG K G KVDGYGL G L Y GTWLQDS G A Y V D G V LQY SR FR N DVSSTG S - N GK V SGKYNSN G FTA SLEAG Y 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 817 R L NL S pt G Y G F Y I EPQ T QL T Y SHQNEMAM K A SNG LNIHLNHYE SL L GR ASMIL GY DITA G N - SQLNV Y V K TGAIR EF S G D 895
Cdd:TIGR01414 293 R Y NL G -- G N G W Y V EPQ A QL S Y FGVSGDDY K E SNG TRVLGGGGD SL Q GR LGLRV GY QFDL G T g RAVKP Y L K ANVLH EF K G G 370
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016498295 896 T EYLL N NSREKYS F K G NGWNN GVGV S A QYNKQHTF Y LEA DY TQ G - NLFDQK Q V N G G Y R F SF 955
Cdd:TIGR01414 371 T GVRV N GVTIRND F S G TRAEY GVGV N A KIKDNLSL Y ADV DY QK G g KKYTDN Q G N L G V R Y SF 431
PL1_Passenger_AT
cd01343 Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of ...
377-620
6.30e-39
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases, SPATEs (serine protease autotransporters secreted by Enterobacteriaceae), Bordetella pertacins, and nonprotease autotransporters, TibA and similar AIDA-like proteins.
Pssm-ID: 238653 [Multi-domain]
Cd Length: 233
Bit Score: 144.81
E-value: 6.30e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 377 GR ITG D SLA IT GAAG A RGIYAMT --- N S QID LT SDL V I D mst PDQMAIATQHDDGYAAS r I N AS G RMLINGSV l SKGG L I 453
Cdd:cd01343 1 GR LVS D GGN IT AGDN A QLTLGGG aly G S SVT LT NGA V L D --- AGNANLSAAASYATLSG - S N IR G TVVLGAGQ - PLQA L A 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 454 N L DMHPGSV WTG S slsdn VN G GKLD V AM N - NSVW NV T SN SN LDT L A L SHS TVDF A sh G ST AG T F T TL N V EN LSGN S TF I M 532
Cdd:cd01343 76 E L LLGGNAA WTG A ----- IQ G LNAT V SL N l NSVW TL T GD SN VNN L T L NGG TVDF N -- G PS AG K F N TL T V NT LSGN G TF V M 148
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 533 R A D VV G egngvn NK GD L L NIS GS SA G NHV L AIR N Q G S E A T T G NEVLT V VKTTD G T A S F S - A SSQ V E LG G Y L Y DVR K N - GT 610
Cdd:cd01343 149 R T D LA G ------ GQ GD K L VVT GS AT G DFN L LVV N T G K E P T S G LNLTL V STPKG G D A E F T l A NGT V D LG A Y R Y TLV K D g NG 222
250
....*....|
gi 1016498295 611 NW E L YASGTV 620
Cdd:cd01343 223 NW T L TGPKKE 232
PRK15313 super family
cl36477 intestinal colonization autotransporter adhesin MisL;
54-614
5.66e-16
intestinal colonization autotransporter adhesin MisL;
PRK15313 :Pssm-ID: 237940 [Multi-domain]
Cd Length: 955
Bit Score: 82.92
E-value: 5.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 54 GT NITIND G DRIT G DT A DPSGNLYG V MTPA G NTPGNINL GND V T VNVND A SGY ----- AK GI IIQ G K N SS ------ L T AN 122
Cdd:PRK15313 76 GT IPVYGN G LTLN G PG A EAFEHTVT V IQNS G TGSPGVIF GND L T IRTQS A NAA nngrd VD GI RTH G A N TP dnpvfi I T GD 155
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 123 R LTVD V V GQ TSA i GIN L igdy THAD LG T G S T IKS N ddg I II G HSSTLTA T qftie N S N G I G L T I N DY ------ GTSVDL G 196
Cdd:PRK15313 156 R TRIY V D GQ DGD - GIN A ---- GYNS LG Q G W T GSA N --- I YV G DDLYIKT T ----- G S Q G R G I T A N AM rdasra KNTIVV G 222
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 197 SGSK I K T D G STGVYIGGLNGNNANG aarf TAT D L TI DVQ G Y S AM GI NVQKN S VVD LG T N S TI KT NG DN AH GLWS fgqvsa 276
Cdd:PRK15313 223 NRAH I V T T G DSSEGLRTGQSGSLIR ---- LGD D A TI ETS G A S ST GI YAASS S RTE LG N N A TI TV NG AS AH AVYA ------ 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 277 naltvdv T G A AA N gvevrggtttigadshissaqggglvt S G SD ATI N fsgtaaqrnsi FS S G S YG AS AQT A T A vinmqn 356
Cdd:PRK15313 293 ------- T N A TV N --------------------------- L G EN ATI S ----------- VN S A S KA AS YSK A P A ------ 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 357 tditvdrngslal GL W ALS G G R I tgd S LA ITG A AGAR G IYAMTNSQ I DLTSDLVI D M S TPDQMA I atqhd DG yaas R I N A 436
Cdd:PRK15313 322 ------------- GL Y ALS R G A I --- N LA GGA A ITMA G DNSSESYA I STETGGIV D G S SGGRFV I ----- DG ---- D I R A 376
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 437 S G RMLIN G SVLSKGGL I N L D M HPG S V W T G S S L -- S DNVNG G KLD V A M NNSV WN V TS N S N L DT L A L - S HS T VD F ASHGSTA 513
Cdd:PRK15313 377 A G ATAAS G TLPQQNST I K L N M TDN S R W D G A S Y it S ATAGT G VIS V Q M SDAT WN M TS S S T L TD L T L n S GA T IN F SHEDGEP 456
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 514 GTFT T L N v E NLS GN STFIMRAD V V geg N GVNNKG D L L NIS G SSA GN HVL A IR N --- Q G SEATT G N E VLT V VKTTD GT as F 590
Cdd:PRK15313 457 WQTL T I N - E DYV GN GGKLVFNT V L --- N DDDSET D R L QVL G NTS GN TFV A VN N igg A G AQTIE G I E IVN V AGNSN GT -- F 530
570 580
....*....|....*....|....
gi 1016498295 591 SAS S QVEL G G Y L Y D V RKN G T NW E L 614
Cdd:PRK15313 531 EKA S RIVA G A Y D Y N V VQK G K NW Y L 554
Name
Accession
Description
Interval
E-value
autotrans_barl
TIGR01414 outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
512-955
8.21e-78
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273608 [Multi-domain]
Cd Length: 431
Bit Score: 260.78
E-value: 8.21e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 512 TA G T F T TL N V EN L - S GN ST F I M RA D V vgeg N G V N NKG D L L NIS G SSA G NHVLAIR N Q G S E ATTGNEVL T V V KT - TDGT A S 589
Cdd:TIGR01414 1 PG G A F N TL T V NG L y T GN GG F V M NT D L ---- G G D N SQT D R L VVN G NAS G TTGVVVN N I G G E GAQTGDGI T L V TV n GGSD A A 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 590 F SAS - SQ V EL G G Y L Y DVR KNGT ---- NW E L YA S GT vpeptpnpeptpap AQP P IVNPDPTPAP A P tpkptttad AG GNYL 664
Cdd:TIGR01414 77 F TLA n GK V DA G A Y T Y TLY KNGT ednn NW Y L TS S LP -------------- DLT P PGQQLSPTYR A E --------- AG SYAA 133
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 665 N VGYL L NYV E NR TL M QRMGDLR NQSK D GN -- I W L R SY GG SLDSFASGKLS G F D MGYS G I Q F GGD KR L S -- DEMP L Y VGL Y 740
Cdd:TIGR01414 134 N ANAA L FLA E LD TL R QRMGDLR SAAR D AG ng V W A R IF GG DNHLDGDAGAA G Y D QNTT G V Q L GGD IL L A gn ADGD L H VGL M 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 741 I G STH A SPDYS ---- GG D G TARSDYM G M Y ASYMAHN G F Y S D L V VKA SR QK N SFHVLD S q N NG V NANGTAK G MSI SLEAG Q 816
Cdd:TIGR01414 214 A G YAK A DIKTR syky GG K G KVDGYGL G L Y GTWLQDS G A Y V D G V LQY SR FR N DVSSTG S - N GK V SGKYNSN G FTA SLEAG Y 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 817 R L NL S pt G Y G F Y I EPQ T QL T Y SHQNEMAM K A SNG LNIHLNHYE SL L GR ASMIL GY DITA G N - SQLNV Y V K TGAIR EF S G D 895
Cdd:TIGR01414 293 R Y NL G -- G N G W Y V EPQ A QL S Y FGVSGDDY K E SNG TRVLGGGGD SL Q GR LGLRV GY QFDL G T g RAVKP Y L K ANVLH EF K G G 370
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016498295 896 T EYLL N NSREKYS F K G NGWNN GVGV S A QYNKQHTF Y LEA DY TQ G - NLFDQK Q V N G G Y R F SF 955
Cdd:TIGR01414 371 T GVRV N GVTIRND F S G TRAEY GVGV N A KIKDNLSL Y ADV DY QK G g KKYTDN Q G N L G V R Y SF 431
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
93-955
4.14e-42
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 166.28
E-value: 4.14e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 93 GNDVTVNVNDAS G YAKGIIIQ G KNSSLTA N RLTVDVV G QTSAIGINLIGDYTHADL G T G STIKSNDD G IIIGHSSTLT A T 172
Cdd:COG3468 1 TASGGGGGATGL G GGGTGGGG G LGGTGGG N AGLGIGN G GGGGAASGSGAGGVAGNG G G G GGGAGGGG G GAGSGGGLAG A G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 173 QFTIENSNGI G LTI N DYGTSVDL G S G S kik TDGST G VYI GG LN G NNAN G AARFTA T DLTIDVQ G YSAM G IN V QKNSVVDL 252
Cdd:COG3468 81 SGGTGGNSTG G GGG N SGTGGTGG G G G G --- GGSGN G GGG GG GG G GGGT G GGGGGG T GSAGGGG G GGGG G TG V GGTGAAAA 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 253 G TNSTIKTN G DNAH G LWSF G QVSANALTVDVTGAAANGVEVR GG TTTI G ADS h ISSAQ GGG LVTS G SDATINF SG TAAQR 332
Cdd:COG3468 158 G GGTGSGGG G SGGG G GAGG G GGGGAGGSGGAGSTGSGAGGGG GG SGGG G GAA - GTGGG GGG GGGA G GATGGAG SG GNTGG 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 333 NSIFSS GS Y G ASAQTATAVINMQN T DITVDRN G SLAL G LWALSGGRITGDSLAITGAA G AR G IYAMTNSQIDLTSDLVID 412
Cdd:COG3468 237 GVGGGG GS A G GTGGGGLTGGGAAG T GGGGGGT G TGSG G GGGGGANGGGSGGGGGASGT G GG G TASTGGGGGGGGGNGGGG 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 413 MSTPDQMAIATQHDD G YAASRINASGRMLINGSVLSK G GLINLDMHP GS VWT G SSL S DNVN G GKLDV A MNN S VWNV T SNS 492
Cdd:COG3468 317 GGGSNAGGGSGGGGG G GGGGGGGGTTLNGAGSAGGGT G AALAGTGGS GS GGG G GGG S GGGG G AGGGG A NTG S DGVG T GLT 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 493 NLD T LALSHST V DFASH G STAG T FT TL N V - E N LS G - N S T FIMRADV vgeg NGV N NKG D L L NIS G SSA G NHVLAIR N Q G SE 570
Cdd:COG3468 397 TGG T GNNGGGG V GGGGG G GLTL T GG TL T V n G N YT G n N G T LVLNTVL ---- GDD N SPT D R L VVN G NTS G TTGVRVN N A G GL 472
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 571 --- ATT G N EV LT V VKTT DG T as F SASSQ V EL G G Y L Y DVRKN G T ----- NW E L yasgtvpeptpnpeptpapaqppivnpd 642
Cdd:COG3468 473 gaq TVN G I EV VE V NGAS DG A -- F TLGGR V VA G A Y E Y TLYQG G S ggddg NW Y L ---------------------------- 522
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 643 PTPAPA P T P KPTTTADAGGN YL NVGYLL N - YV E NR TL MQ R M G DL R N ---- Q S KDGNI WLR SY GG SLD S FA S GKLSGF D MG 717
Cdd:COG3468 523 RSTLTP P D P PTPVYRPEVPS YL ANPAAA N g LF E LG TL HD R L G ER R Y tdtg E S DNSGA WLR VE GG HNR S RD S SGQLDY D SN 602
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 718 YS G I Q F GGD KRL -- SDEMP L Y VG LYI G STHASP D YSG ----- G D G TARSDYM G M Y ASYMAH NGFY S D L V VKA S RQK N SFH 790
Cdd:COG3468 603 RY G L Q L GGD LLQ we DGGGR L H VG VMA G YGNGDS D VRS ratgt G K G DVDGYSL G L Y GTWYGN NGFY V D G V LQY S WFD N DVS 682
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 791 VL D S qn N GV NANGTAK G M S I SLEAG QRLN L SP tgy G FYI EPQ T QL T Y SHQNEMAMKA SNG LNIHLNHYE SL L GR ASMI LG 870
Cdd:COG3468 683 SD D L -- G GV TGSYDGN G Y S A SLEAG YPFK L GE --- G WSL EPQ A QL I Y QGVDFDDFTD SNG TRVSGDDGD SL Q GR LGLR LG 757
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 871 Y DITAGN - SQ L NV Y VKTGAIR EF S GD TEYLL N NSREKYSFK G NGWNN G V GV SA Q Y NK QHTF Y LEAD Y TQ G N --- LFDQKQ 946
Cdd:COG3468 758 Y EFHWDD g RA L QP Y LEANWLH EF L GD NSVTV N GVSFSQDGS G TWGEL G L GV TG Q L NK NLSL Y GDVG Y QT G L dgy DSSDTS 837
....*....
gi 1016498295 947 V N G G Y R F SF 955
Cdd:COG3468 838 G N L G V R Y SF 846
PL1_Passenger_AT
cd01343 Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of ...
377-620
6.30e-39
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases, SPATEs (serine protease autotransporters secreted by Enterobacteriaceae), Bordetella pertacins, and nonprotease autotransporters, TibA and similar AIDA-like proteins.
Pssm-ID: 238653 [Multi-domain]
Cd Length: 233
Bit Score: 144.81
E-value: 6.30e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 377 GR ITG D SLA IT GAAG A RGIYAMT --- N S QID LT SDL V I D mst PDQMAIATQHDDGYAAS r I N AS G RMLINGSV l SKGG L I 453
Cdd:cd01343 1 GR LVS D GGN IT AGDN A QLTLGGG aly G S SVT LT NGA V L D --- AGNANLSAAASYATLSG - S N IR G TVVLGAGQ - PLQA L A 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 454 N L DMHPGSV WTG S slsdn VN G GKLD V AM N - NSVW NV T SN SN LDT L A L SHS TVDF A sh G ST AG T F T TL N V EN LSGN S TF I M 532
Cdd:cd01343 76 E L LLGGNAA WTG A ----- IQ G LNAT V SL N l NSVW TL T GD SN VNN L T L NGG TVDF N -- G PS AG K F N TL T V NT LSGN G TF V M 148
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 533 R A D VV G egngvn NK GD L L NIS GS SA G NHV L AIR N Q G S E A T T G NEVLT V VKTTD G T A S F S - A SSQ V E LG G Y L Y DVR K N - GT 610
Cdd:cd01343 149 R T D LA G ------ GQ GD K L VVT GS AT G DFN L LVV N T G K E P T S G LNLTL V STPKG G D A E F T l A NGT V D LG A Y R Y TLV K D g NG 222
250
....*....|
gi 1016498295 611 NW E L YASGTV 620
Cdd:cd01343 223 NW T L TGPKKE 232
Pertactin
pfam03212 Pertactin;
494-616
2.05e-38
Pertactin;
Pssm-ID: 460848 [Multi-domain]
Cd Length: 121
Bit Score: 139.07
E-value: 2.05e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 494 LDT LALS HS TVDFAS HGST AG T F T TL NVEN LSG NS TF I M R ADV V gegngv NNK GD L L NI SG SSA G N HVL AI RN Q GSE ATT 573
Cdd:pfam03212 1 VAA LALS GG TVDFAS PAEP AG A F K TL TTQT LSG SG TF V M N ADV A ------ SGT GD Q L VV SG NAS G Q HVL LV RN T GSE PAS 74
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1016498295 574 GN EV LT V V K T TD G T A S F SASS --- Q V EL G G Y L Y DVRKN G - T NW E L Y A 616
Cdd:pfam03212 75 GN TK LT L V E T GG G D A A F TLGN kgg K V DA G T Y R Y RLTAD G n G NW S L T A 121
Autotransporter
smart00869 Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
701-940
6.17e-21
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.
Pssm-ID: 214872 [Multi-domain]
Cd Length: 268
Bit Score: 93.79
E-value: 6.17e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 701 GSL DS FA SG KLS GFD MGYS G I Q F G G D K RLSD EMP L YV G LYI G STHASP D Y SG GD G TARS D ---- YM G M YA S Y MAH NG F Y S 776
Cdd:smart00869 8 LRQ DS SG SG GSA GFD YDSY G L Q L G A D Y RLSD NGN L SL G FAA G YGNSKV D F SG NK G SGKG D vdsy GL G L YA G Y SLG NG L Y L 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 777 D LVVKAS R QK N SFHVLDSQNNGVN A N G -- TAK G MSI SLEAG Q R LN L spt G Y G FYIE P QTQ L T YS HQNEMAMKA S N G ---- 850
Cdd:smart00869 88 D AQLGYG R SD N DTKRKVTLGGAGR A K G sy DGT G YGA SLEAG Y R FY L --- G G G LTLT P FAG L A YS RVRQDGFTE S G G gafg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 851 L NIHLNHYE SL LGRASMI L G Y DITA G - NSQ L NV Y VKTGAIRE F SG D TEYLLNN -------- SREKYSFKG N GWNN G V G V S 921
Cdd:smart00869 165 L SVDSQSLD SL SLPLGLR L E Y RLAL G d GAT L TP Y LRLAYVHD F YD D NPVVTAS llgsgasf TTSGTDLDR N AAEL G L G L S 244
250
....*....|....*....
gi 1016498295 922 A QYNKQHTFY L EA D YTQ G N 940
Cdd:smart00869 245 A KLSNGLSLS L NY D GEF G G 263
PL_Passenger_AT
cd00253 Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V ...
450-620
4.73e-20
Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V secretion system. Autotransporters are proteins used by Gram-negative bacteria to transport proteins across their outer membranes. The C-terminal (beta) domain of autotransporters forms a pore in the outer membrane through which the N-terminal passenger domain is transported. Following transport, the passenger domain is generally cleaved by an outer membrane protease with the passenger domain either remaining in contact with the surface via a noncovalent interaction with the beta domain or cleaved to release a soluble protein. These proteins are highly diverse and perform a variety of functions that promote virulence, including catalyzing proteolysis, serving as an adhesin, mediating actin-promoted motility, or serving as a cytotoxin. Proteins in this family share similarity in the C-terminal region of the passenger domain as seen in the pertactin structure P.69, a Bordetella pertussis agglutinogen responsible for human pertussis. The P.69 protein consists of a 16-stranded parallel beta-helix with a V-shaped cross-section, and is one of the largest beta-helix known to date.
Pssm-ID: 238156 [Multi-domain]
Cd Length: 186
Bit Score: 88.96
E-value: 4.73e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 450 GG LIN L DMHPG SVW T G S slsdn VNG G KLD V AM N - NS V W NV T SN S NLD - T L AL S HS TVDF A S HGSTAG T F T T l N VEN L S GN 527
Cdd:cd00253 18 GG GGA L TLTGN SVW L G T ----- LQA G GGT V SL N s NS L W TL T GD S TVN g N L TN S GG TVDF G S ASGAFN T L T V - N GNY L G GN 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 528 S TF IMRA D V vgeg N G V N NKG D L L NIS G SSA G NHVL A IR N Q G S E ATTGNEVLTV V KTTD G T - A S FS ASSQ V EL G G Y L Y DVR 606
Cdd:cd00253 92 G TF VLNT D L ---- G G D N SPT D K L VVT G NAS G TTNV A VV N A G G E GASTGDGIEL V EVNG G S d A A FS LAGR V DA G A Y E Y TLY 167
170
....*....|....*...
gi 1016498295 607 K N G ---- T NW E L YASGTV 620
Cdd:cd00253 168 K G G vgnn G NW Y L RSTLAP 185
PRK15313
PRK15313 intestinal colonization autotransporter adhesin MisL;
236-864
1.15e-17
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain]
Cd Length: 955
Bit Score: 88.32
E-value: 1.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 236 GY SAM G INVQKNSVVDL G TNST IKT N G DNAH G lwsfgq VS ANA LTVDVTGAAANG V EV R GGTT T I G AD S H - ISSA Q G G G L 314
Cdd:PRK15313 172 GY NSL G QGWTGSANIYV G DDLY IKT T G SQGR G ------ IT ANA MRDASRAKNTIV V GN R AHIV T T G DS S E g LRTG Q S G S L 245
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 315 VTS G S DATI NF SG TA aqrnsif S S G S Y G AS A ------ QT AT AVI N MQNTDITVDR N GSLA LG LW A LSG gr ITGD S L A ITG 388
Cdd:PRK15313 246 IRL G D DATI ET SG AS ------- S T G I Y A AS S srtelg NN AT ITV N GASAHAVYAT N ATVN LG EN A TIS -- VNSA S K A ASY 316
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 389 AAGAR G I YA MTNSQ I D L TSDLV I D M S --- TPDQM AI A T QHD --- DG YAAS R ------ I N A S G RMLIN G SVLSKGGL I N L D 456
Cdd:PRK15313 317 SKAPA G L YA LSRGA I N L AGGAA I T M A gdn SSESY AI S T ETG giv DG SSGG R fvidgd I R A A G ATAAS G TLPQQNST I K L N 396
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 457 M HPG S V W T G S S L -- S DNVNG G KLD V A M NNSV WN V TS N S N L DT L A L - S HS T VD F ASHGSTAGTFT T L N v E NLS GN STFIMR 533
Cdd:PRK15313 397 M TDN S R W D G A S Y it S ATAGT G VIS V Q M SDAT WN M TS S S T L TD L T L n S GA T IN F SHEDGEPWQTL T I N - E DYV GN GGKLVF 475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 534 AD V V geg N GVNNKG D L L NIS G SSA GN HVL A IR N --- Q G SEATT G N E VLT V VKTTD GT as F SAS S QVEL G G Y L Y D V RKN G T 610
Cdd:PRK15313 476 NT V L --- N DDDSET D R L QVL G NTS GN TFV A VN N igg A G AQTIE G I E IVN V AGNSN GT -- F EKA S RIVA G A Y D Y N V VQK G K 550
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 611 NW E L YA ------------------ SGTV P E P TPNPEPT P APAQ P P I --- V N ------------------ PD PTPAPA P TP 651
Cdd:PRK15313 551 NW Y L TS yiepdepiipdpvdpvip DPVI P D P VDPDPVD P VIPD P V I pdp V D pdpvdpepvdpvipdpti PD IGQSDT P PI 630
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 652 KPTTTADAG G N YL NVG Y LL N YVENRT L MQ R M G D ------ L RNQS K DGNI W L R SY G GSLD - SFA SG K L SGFDMG Y S g I Q F G 724
Cdd:PRK15313 631 TEHQFRPEV G S YL ANN Y AA N TLFMTR L HD R L G E tqytdm L TGEK K VTSL W M R NV G AHTR f NDG SG Q L KTRINS Y V - L Q L G 709
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 725 GD -- KRLS D EMPLY vgl Y IG STHASPDYSGGDGTAR SDY ---------- M G M Y ASYM A H N GFY S DLV V KASRQK N S F HVL 792
Cdd:PRK15313 710 GD la QWST D GLDRW --- H IG AMAGYANSQNRTLSSV SDY hsrgqvtgys V G L Y GTWY A N N IDR S GAY V DTWMLY N W F DNK 786
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1016498295 793 DSQNNGVNANGTA KG MSI S L EAG QRLN L SPTGY - GFYIE P QT Q LTYSHQNEMAMKAS NG LNIHLNHYES LL G R 864
Cdd:PRK15313 787 VMGQDQAAEKYKS KG ITA S V EAG YSFR L GESAH q SYWLQ P KA Q VVWMGVQADDNREA NG TLVKDDTAGN LL T R 859
PRK15313
PRK15313 intestinal colonization autotransporter adhesin MisL;
54-614
5.66e-16
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain]
Cd Length: 955
Bit Score: 82.92
E-value: 5.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 54 GT NITIND G DRIT G DT A DPSGNLYG V MTPA G NTPGNINL GND V T VNVND A SGY ----- AK GI IIQ G K N SS ------ L T AN 122
Cdd:PRK15313 76 GT IPVYGN G LTLN G PG A EAFEHTVT V IQNS G TGSPGVIF GND L T IRTQS A NAA nngrd VD GI RTH G A N TP dnpvfi I T GD 155
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 123 R LTVD V V GQ TSA i GIN L igdy THAD LG T G S T IKS N ddg I II G HSSTLTA T qftie N S N G I G L T I N DY ------ GTSVDL G 196
Cdd:PRK15313 156 R TRIY V D GQ DGD - GIN A ---- GYNS LG Q G W T GSA N --- I YV G DDLYIKT T ----- G S Q G R G I T A N AM rdasra KNTIVV G 222
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 197 SGSK I K T D G STGVYIGGLNGNNANG aarf TAT D L TI DVQ G Y S AM GI NVQKN S VVD LG T N S TI KT NG DN AH GLWS fgqvsa 276
Cdd:PRK15313 223 NRAH I V T T G DSSEGLRTGQSGSLIR ---- LGD D A TI ETS G A S ST GI YAASS S RTE LG N N A TI TV NG AS AH AVYA ------ 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 277 naltvdv T G A AA N gvevrggtttigadshissaqggglvt S G SD ATI N fsgtaaqrnsi FS S G S YG AS AQT A T A vinmqn 356
Cdd:PRK15313 293 ------- T N A TV N --------------------------- L G EN ATI S ----------- VN S A S KA AS YSK A P A ------ 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 357 tditvdrngslal GL W ALS G G R I tgd S LA ITG A AGAR G IYAMTNSQ I DLTSDLVI D M S TPDQMA I atqhd DG yaas R I N A 436
Cdd:PRK15313 322 ------------- GL Y ALS R G A I --- N LA GGA A ITMA G DNSSESYA I STETGGIV D G S SGGRFV I ----- DG ---- D I R A 376
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 437 S G RMLIN G SVLSKGGL I N L D M HPG S V W T G S S L -- S DNVNG G KLD V A M NNSV WN V TS N S N L DT L A L - S HS T VD F ASHGSTA 513
Cdd:PRK15313 377 A G ATAAS G TLPQQNST I K L N M TDN S R W D G A S Y it S ATAGT G VIS V Q M SDAT WN M TS S S T L TD L T L n S GA T IN F SHEDGEP 456
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 514 GTFT T L N v E NLS GN STFIMRAD V V geg N GVNNKG D L L NIS G SSA GN HVL A IR N --- Q G SEATT G N E VLT V VKTTD GT as F 590
Cdd:PRK15313 457 WQTL T I N - E DYV GN GGKLVFNT V L --- N DDDSET D R L QVL G NTS GN TFV A VN N igg A G AQTIE G I E IVN V AGNSN GT -- F 530
570 580
....*....|....*....|....
gi 1016498295 591 SAS S QVEL G G Y L Y D V RKN G T NW E L 614
Cdd:PRK15313 531 EKA S RIVA G A Y D Y N V VQK G K NW Y L 554
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
53-600
2.99e-08
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 57.85
E-value: 2.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 53 N G TNI TI NDGDRI TG D T ADPSGNLYGVMTPAGN T PGNINLGNDVTVNVND A SGYAKGIIIQGKNSSLTANRLTVDVVGQT 132
Cdd:COG3210 815 T G SGG TI TINTAT TG L T GTGDTTSGAGGSNTTD T TTGTTSDGASGGGTAG A NSGSLAATAASITVGSGGVATSTGTANAG 894
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 133 SAIGINLIGDYTHADLGTGS T IKSNDD G IIIGHSSTLT A TQFTIE N SNGIGLTINDYGTSVDLGSGSKIKTD G STGVYIG 212
Cdd:COG3210 895 TLTNLGTTTNAASGNGAVLA T VTATGT G GGGLTGGNAA A GGTGAG N GTTALSGTQGNAGLSAASASDGAGDT G ASSAAGS 974
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 213 GLN G NN AN G A ARFTATDLTIDVQGYSAM G INVQKNSVVDLGTNSTIKTN G DNAHGLWSFGQVS A N A LTVDVT G AA A N G VE 292
Cdd:COG3210 975 SAV G TS AN S A GSTGGVIAATGILVAGNS G TTASTTGGSGAIVAGGNGVT G TTGTASATGTGTA A T A GGQNGV G VN A S G IS 1054
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 293 VRGGTTTIGADSHISSAQGGGLVTS G SD A TINFS GT AAQRNS I FSS G SY G A S AQ T A T AVINMQNTDITVDRNGSLALGLW 372
Cdd:COG3210 1055 GGNAAALTASGTAGTTGGTAASNGG G GT A QASGA GT THTLGG I TNG G AT G T S GG T T T STGGVTASKVGGTTTVGATGTST 1134
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 373 A LSGGRIT G DSLAITGAAGAR G IYAMTNSQIDLTSDLVIDMS T PDQMAIATQHDDGYAASRINAS G RMLIN GS VLSK G GL 452
Cdd:COG3210 1135 A STEAAGA G TLTGLVAVSAVA G GASSASAGDTTAVAAATTTT T GSAINGGADSAATEGTAGTDLK G GDSTG GS TTTI G TT 1214
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 453 INLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLD T L A LSHSTVDF A SHGSTAGTFT T LNVENLSGN ST FIM 532
Cdd:COG3210 1215 NVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDAT T G A TAGAVSNG A TSTVAGNAGA T ATGSTVDIG ST SAT 1294
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1016498295 533 R A DVVGEGN G VNNKGDLLNISGSSA G NHVLAIRNQGSEATTG N EVLTVVK TT DGTASFSASSQVELGG 600
Cdd:COG3210 1295 S A GGSLDTT G NTAGANGATVGTGIG G TTATGTAVAAVNSGGV N AGGGTIN TT AANTGLNGGNGATDSA 1362
Name
Accession
Description
Interval
E-value
autotrans_barl
TIGR01414 outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
512-955
8.21e-78
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273608 [Multi-domain]
Cd Length: 431
Bit Score: 260.78
E-value: 8.21e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 512 TA G T F T TL N V EN L - S GN ST F I M RA D V vgeg N G V N NKG D L L NIS G SSA G NHVLAIR N Q G S E ATTGNEVL T V V KT - TDGT A S 589
Cdd:TIGR01414 1 PG G A F N TL T V NG L y T GN GG F V M NT D L ---- G G D N SQT D R L VVN G NAS G TTGVVVN N I G G E GAQTGDGI T L V TV n GGSD A A 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 590 F SAS - SQ V EL G G Y L Y DVR KNGT ---- NW E L YA S GT vpeptpnpeptpap AQP P IVNPDPTPAP A P tpkptttad AG GNYL 664
Cdd:TIGR01414 77 F TLA n GK V DA G A Y T Y TLY KNGT ednn NW Y L TS S LP -------------- DLT P PGQQLSPTYR A E --------- AG SYAA 133
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 665 N VGYL L NYV E NR TL M QRMGDLR NQSK D GN -- I W L R SY GG SLDSFASGKLS G F D MGYS G I Q F GGD KR L S -- DEMP L Y VGL Y 740
Cdd:TIGR01414 134 N ANAA L FLA E LD TL R QRMGDLR SAAR D AG ng V W A R IF GG DNHLDGDAGAA G Y D QNTT G V Q L GGD IL L A gn ADGD L H VGL M 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 741 I G STH A SPDYS ---- GG D G TARSDYM G M Y ASYMAHN G F Y S D L V VKA SR QK N SFHVLD S q N NG V NANGTAK G MSI SLEAG Q 816
Cdd:TIGR01414 214 A G YAK A DIKTR syky GG K G KVDGYGL G L Y GTWLQDS G A Y V D G V LQY SR FR N DVSSTG S - N GK V SGKYNSN G FTA SLEAG Y 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 817 R L NL S pt G Y G F Y I EPQ T QL T Y SHQNEMAM K A SNG LNIHLNHYE SL L GR ASMIL GY DITA G N - SQLNV Y V K TGAIR EF S G D 895
Cdd:TIGR01414 293 R Y NL G -- G N G W Y V EPQ A QL S Y FGVSGDDY K E SNG TRVLGGGGD SL Q GR LGLRV GY QFDL G T g RAVKP Y L K ANVLH EF K G G 370
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016498295 896 T EYLL N NSREKYS F K G NGWNN GVGV S A QYNKQHTF Y LEA DY TQ G - NLFDQK Q V N G G Y R F SF 955
Cdd:TIGR01414 371 T GVRV N GVTIRND F S G TRAEY GVGV N A KIKDNLSL Y ADV DY QK G g KKYTDN Q G N L G V R Y SF 431
AidA
COG3468 Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
93-955
4.14e-42
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain]
Cd Length: 846
Bit Score: 166.28
E-value: 4.14e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 93 GNDVTVNVNDAS G YAKGIIIQ G KNSSLTA N RLTVDVV G QTSAIGINLIGDYTHADL G T G STIKSNDD G IIIGHSSTLT A T 172
Cdd:COG3468 1 TASGGGGGATGL G GGGTGGGG G LGGTGGG N AGLGIGN G GGGGAASGSGAGGVAGNG G G G GGGAGGGG G GAGSGGGLAG A G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 173 QFTIENSNGI G LTI N DYGTSVDL G S G S kik TDGST G VYI GG LN G NNAN G AARFTA T DLTIDVQ G YSAM G IN V QKNSVVDL 252
Cdd:COG3468 81 SGGTGGNSTG G GGG N SGTGGTGG G G G G --- GGSGN G GGG GG GG G GGGT G GGGGGG T GSAGGGG G GGGG G TG V GGTGAAAA 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 253 G TNSTIKTN G DNAH G LWSF G QVSANALTVDVTGAAANGVEVR GG TTTI G ADS h ISSAQ GGG LVTS G SDATINF SG TAAQR 332
Cdd:COG3468 158 G GGTGSGGG G SGGG G GAGG G GGGGAGGSGGAGSTGSGAGGGG GG SGGG G GAA - GTGGG GGG GGGA G GATGGAG SG GNTGG 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 333 NSIFSS GS Y G ASAQTATAVINMQN T DITVDRN G SLAL G LWALSGGRITGDSLAITGAA G AR G IYAMTNSQIDLTSDLVID 412
Cdd:COG3468 237 GVGGGG GS A G GTGGGGLTGGGAAG T GGGGGGT G TGSG G GGGGGANGGGSGGGGGASGT G GG G TASTGGGGGGGGGNGGGG 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 413 MSTPDQMAIATQHDD G YAASRINASGRMLINGSVLSK G GLINLDMHP GS VWT G SSL S DNVN G GKLDV A MNN S VWNV T SNS 492
Cdd:COG3468 317 GGGSNAGGGSGGGGG G GGGGGGGGTTLNGAGSAGGGT G AALAGTGGS GS GGG G GGG S GGGG G AGGGG A NTG S DGVG T GLT 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 493 NLD T LALSHST V DFASH G STAG T FT TL N V - E N LS G - N S T FIMRADV vgeg NGV N NKG D L L NIS G SSA G NHVLAIR N Q G SE 570
Cdd:COG3468 397 TGG T GNNGGGG V GGGGG G GLTL T GG TL T V n G N YT G n N G T LVLNTVL ---- GDD N SPT D R L VVN G NTS G TTGVRVN N A G GL 472
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 571 --- ATT G N EV LT V VKTT DG T as F SASSQ V EL G G Y L Y DVRKN G T ----- NW E L yasgtvpeptpnpeptpapaqppivnpd 642
Cdd:COG3468 473 gaq TVN G I EV VE V NGAS DG A -- F TLGGR V VA G A Y E Y TLYQG G S ggddg NW Y L ---------------------------- 522
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 643 PTPAPA P T P KPTTTADAGGN YL NVGYLL N - YV E NR TL MQ R M G DL R N ---- Q S KDGNI WLR SY GG SLD S FA S GKLSGF D MG 717
Cdd:COG3468 523 RSTLTP P D P PTPVYRPEVPS YL ANPAAA N g LF E LG TL HD R L G ER R Y tdtg E S DNSGA WLR VE GG HNR S RD S SGQLDY D SN 602
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 718 YS G I Q F GGD KRL -- SDEMP L Y VG LYI G STHASP D YSG ----- G D G TARSDYM G M Y ASYMAH NGFY S D L V VKA S RQK N SFH 790
Cdd:COG3468 603 RY G L Q L GGD LLQ we DGGGR L H VG VMA G YGNGDS D VRS ratgt G K G DVDGYSL G L Y GTWYGN NGFY V D G V LQY S WFD N DVS 682
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 791 VL D S qn N GV NANGTAK G M S I SLEAG QRLN L SP tgy G FYI EPQ T QL T Y SHQNEMAMKA SNG LNIHLNHYE SL L GR ASMI LG 870
Cdd:COG3468 683 SD D L -- G GV TGSYDGN G Y S A SLEAG YPFK L GE --- G WSL EPQ A QL I Y QGVDFDDFTD SNG TRVSGDDGD SL Q GR LGLR LG 757
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 871 Y DITAGN - SQ L NV Y VKTGAIR EF S GD TEYLL N NSREKYSFK G NGWNN G V GV SA Q Y NK QHTF Y LEAD Y TQ G N --- LFDQKQ 946
Cdd:COG3468 758 Y EFHWDD g RA L QP Y LEANWLH EF L GD NSVTV N GVSFSQDGS G TWGEL G L GV TG Q L NK NLSL Y GDVG Y QT G L dgy DSSDTS 837
....*....
gi 1016498295 947 V N G G Y R F SF 955
Cdd:COG3468 838 G N L G V R Y SF 846
PL1_Passenger_AT
cd01343 Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of ...
377-620
6.30e-39
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases, SPATEs (serine protease autotransporters secreted by Enterobacteriaceae), Bordetella pertacins, and nonprotease autotransporters, TibA and similar AIDA-like proteins.
Pssm-ID: 238653 [Multi-domain]
Cd Length: 233
Bit Score: 144.81
E-value: 6.30e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 377 GR ITG D SLA IT GAAG A RGIYAMT --- N S QID LT SDL V I D mst PDQMAIATQHDDGYAAS r I N AS G RMLINGSV l SKGG L I 453
Cdd:cd01343 1 GR LVS D GGN IT AGDN A QLTLGGG aly G S SVT LT NGA V L D --- AGNANLSAAASYATLSG - S N IR G TVVLGAGQ - PLQA L A 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 454 N L DMHPGSV WTG S slsdn VN G GKLD V AM N - NSVW NV T SN SN LDT L A L SHS TVDF A sh G ST AG T F T TL N V EN LSGN S TF I M 532
Cdd:cd01343 76 E L LLGGNAA WTG A ----- IQ G LNAT V SL N l NSVW TL T GD SN VNN L T L NGG TVDF N -- G PS AG K F N TL T V NT LSGN G TF V M 148
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 533 R A D VV G egngvn NK GD L L NIS GS SA G NHV L AIR N Q G S E A T T G NEVLT V VKTTD G T A S F S - A SSQ V E LG G Y L Y DVR K N - GT 610
Cdd:cd01343 149 R T D LA G ------ GQ GD K L VVT GS AT G DFN L LVV N T G K E P T S G LNLTL V STPKG G D A E F T l A NGT V D LG A Y R Y TLV K D g NG 222
250
....*....|
gi 1016498295 611 NW E L YASGTV 620
Cdd:cd01343 223 NW T L TGPKKE 232
Pertactin
pfam03212 Pertactin;
494-616
2.05e-38
Pertactin;
Pssm-ID: 460848 [Multi-domain]
Cd Length: 121
Bit Score: 139.07
E-value: 2.05e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 494 LDT LALS HS TVDFAS HGST AG T F T TL NVEN LSG NS TF I M R ADV V gegngv NNK GD L L NI SG SSA G N HVL AI RN Q GSE ATT 573
Cdd:pfam03212 1 VAA LALS GG TVDFAS PAEP AG A F K TL TTQT LSG SG TF V M N ADV A ------ SGT GD Q L VV SG NAS G Q HVL LV RN T GSE PAS 74
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1016498295 574 GN EV LT V V K T TD G T A S F SASS --- Q V EL G G Y L Y DVRKN G - T NW E L Y A 616
Cdd:pfam03212 75 GN TK LT L V E T GG G D A A F TLGN kgg K V DA G T Y R Y RLTAD G n G NW S L T A 121
Autotransporter
pfam03797 Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
694-935
8.68e-30
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.
Pssm-ID: 461054 [Multi-domain]
Cd Length: 255
Bit Score: 119.03
E-value: 8.68e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 694 I W L R SY GG SLDSFAS G KLS G F D MGYS G I Q F G G D K RL S D E mp L YV G LYI G STHASP D YS G GD G TAR SD -- YM G M Y AS Y MAH 771
Cdd:pfam03797 1 V W A R GF GG RGKQDGD G GAA G Y D ADTG G L Q V G A D Y RL G D N -- L RL G VAF G YSRSDA D VD G RG G SGD SD sy SL G L Y GT Y YGD 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 772 N G F Y S D LVVKASRQK N SFH --- V L DSQNNGVNANGTAK G MSI SLEAG Q R LN L SP tgy G FYI EP QTQ L T Y SHQNEMAMKA S 848
Cdd:pfam03797 79 G G W Y L D GGLGYGWHD N DTR rsv D L GGFSETAKGDYDGN G FGA SLEAG Y R FA L GG --- G WTL EP FAG L A Y VRLRLDGFTE S 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 849 N G --- L NIHLNH Y E SL L GR ASMI L G Y DITA G NSQ L NV Y VKT G AIR EF SG D TEYLLN ---------- NSREKYSFKGNGWN 915
Cdd:pfam03797 156 G G aaa L SVDSQS Y D SL T GR LGLR L S Y TFDL G GGT L TP Y ARL G WRH EF GD D DPVTTA afaglsgags FTVAGADLARDSLE 235
250 260
....*....|....*....|
gi 1016498295 916 N G V G V SAQ YNKQHTF Y LEA D 935
Cdd:pfam03797 236 L G A G L SAQ LSDNLSL Y ANY D 255
Autotransporter
smart00869 Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
701-940
6.17e-21
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.
Pssm-ID: 214872 [Multi-domain]
Cd Length: 268
Bit Score: 93.79
E-value: 6.17e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 701 GSL DS FA SG KLS GFD MGYS G I Q F G G D K RLSD EMP L YV G LYI G STHASP D Y SG GD G TARS D ---- YM G M YA S Y MAH NG F Y S 776
Cdd:smart00869 8 LRQ DS SG SG GSA GFD YDSY G L Q L G A D Y RLSD NGN L SL G FAA G YGNSKV D F SG NK G SGKG D vdsy GL G L YA G Y SLG NG L Y L 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 777 D LVVKAS R QK N SFHVLDSQNNGVN A N G -- TAK G MSI SLEAG Q R LN L spt G Y G FYIE P QTQ L T YS HQNEMAMKA S N G ---- 850
Cdd:smart00869 88 D AQLGYG R SD N DTKRKVTLGGAGR A K G sy DGT G YGA SLEAG Y R FY L --- G G G LTLT P FAG L A YS RVRQDGFTE S G G gafg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 851 L NIHLNHYE SL LGRASMI L G Y DITA G - NSQ L NV Y VKTGAIRE F SG D TEYLLNN -------- SREKYSFKG N GWNN G V G V S 921
Cdd:smart00869 165 L SVDSQSLD SL SLPLGLR L E Y RLAL G d GAT L TP Y LRLAYVHD F YD D NPVVTAS llgsgasf TTSGTDLDR N AAEL G L G L S 244
250
....*....|....*....
gi 1016498295 922 A QYNKQHTFY L EA D YTQ G N 940
Cdd:smart00869 245 A KLSNGLSLS L NY D GEF G G 263
PL_Passenger_AT
cd00253 Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V ...
450-620
4.73e-20
Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V secretion system. Autotransporters are proteins used by Gram-negative bacteria to transport proteins across their outer membranes. The C-terminal (beta) domain of autotransporters forms a pore in the outer membrane through which the N-terminal passenger domain is transported. Following transport, the passenger domain is generally cleaved by an outer membrane protease with the passenger domain either remaining in contact with the surface via a noncovalent interaction with the beta domain or cleaved to release a soluble protein. These proteins are highly diverse and perform a variety of functions that promote virulence, including catalyzing proteolysis, serving as an adhesin, mediating actin-promoted motility, or serving as a cytotoxin. Proteins in this family share similarity in the C-terminal region of the passenger domain as seen in the pertactin structure P.69, a Bordetella pertussis agglutinogen responsible for human pertussis. The P.69 protein consists of a 16-stranded parallel beta-helix with a V-shaped cross-section, and is one of the largest beta-helix known to date.
Pssm-ID: 238156 [Multi-domain]
Cd Length: 186
Bit Score: 88.96
E-value: 4.73e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 450 GG LIN L DMHPG SVW T G S slsdn VNG G KLD V AM N - NS V W NV T SN S NLD - T L AL S HS TVDF A S HGSTAG T F T T l N VEN L S GN 527
Cdd:cd00253 18 GG GGA L TLTGN SVW L G T ----- LQA G GGT V SL N s NS L W TL T GD S TVN g N L TN S GG TVDF G S ASGAFN T L T V - N GNY L G GN 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 528 S TF IMRA D V vgeg N G V N NKG D L L NIS G SSA G NHVL A IR N Q G S E ATTGNEVLTV V KTTD G T - A S FS ASSQ V EL G G Y L Y DVR 606
Cdd:cd00253 92 G TF VLNT D L ---- G G D N SPT D K L VVT G NAS G TTNV A VV N A G G E GASTGDGIEL V EVNG G S d A A FS LAGR V DA G A Y E Y TLY 167
170
....*....|....*...
gi 1016498295 607 K N G ---- T NW E L YASGTV 620
Cdd:cd00253 168 K G G vgnn G NW Y L RSTLAP 185
PRK15313
PRK15313 intestinal colonization autotransporter adhesin MisL;
236-864
1.15e-17
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain]
Cd Length: 955
Bit Score: 88.32
E-value: 1.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 236 GY SAM G INVQKNSVVDL G TNST IKT N G DNAH G lwsfgq VS ANA LTVDVTGAAANG V EV R GGTT T I G AD S H - ISSA Q G G G L 314
Cdd:PRK15313 172 GY NSL G QGWTGSANIYV G DDLY IKT T G SQGR G ------ IT ANA MRDASRAKNTIV V GN R AHIV T T G DS S E g LRTG Q S G S L 245
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 315 VTS G S DATI NF SG TA aqrnsif S S G S Y G AS A ------ QT AT AVI N MQNTDITVDR N GSLA LG LW A LSG gr ITGD S L A ITG 388
Cdd:PRK15313 246 IRL G D DATI ET SG AS ------- S T G I Y A AS S srtelg NN AT ITV N GASAHAVYAT N ATVN LG EN A TIS -- VNSA S K A ASY 316
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 389 AAGAR G I YA MTNSQ I D L TSDLV I D M S --- TPDQM AI A T QHD --- DG YAAS R ------ I N A S G RMLIN G SVLSKGGL I N L D 456
Cdd:PRK15313 317 SKAPA G L YA LSRGA I N L AGGAA I T M A gdn SSESY AI S T ETG giv DG SSGG R fvidgd I R A A G ATAAS G TLPQQNST I K L N 396
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 457 M HPG S V W T G S S L -- S DNVNG G KLD V A M NNSV WN V TS N S N L DT L A L - S HS T VD F ASHGSTAGTFT T L N v E NLS GN STFIMR 533
Cdd:PRK15313 397 M TDN S R W D G A S Y it S ATAGT G VIS V Q M SDAT WN M TS S S T L TD L T L n S GA T IN F SHEDGEPWQTL T I N - E DYV GN GGKLVF 475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 534 AD V V geg N GVNNKG D L L NIS G SSA GN HVL A IR N --- Q G SEATT G N E VLT V VKTTD GT as F SAS S QVEL G G Y L Y D V RKN G T 610
Cdd:PRK15313 476 NT V L --- N DDDSET D R L QVL G NTS GN TFV A VN N igg A G AQTIE G I E IVN V AGNSN GT -- F EKA S RIVA G A Y D Y N V VQK G K 550
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 611 NW E L YA ------------------ SGTV P E P TPNPEPT P APAQ P P I --- V N ------------------ PD PTPAPA P TP 651
Cdd:PRK15313 551 NW Y L TS yiepdepiipdpvdpvip DPVI P D P VDPDPVD P VIPD P V I pdp V D pdpvdpepvdpvipdpti PD IGQSDT P PI 630
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 652 KPTTTADAG G N YL NVG Y LL N YVENRT L MQ R M G D ------ L RNQS K DGNI W L R SY G GSLD - SFA SG K L SGFDMG Y S g I Q F G 724
Cdd:PRK15313 631 TEHQFRPEV G S YL ANN Y AA N TLFMTR L HD R L G E tqytdm L TGEK K VTSL W M R NV G AHTR f NDG SG Q L KTRINS Y V - L Q L G 709
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 725 GD -- KRLS D EMPLY vgl Y IG STHASPDYSGGDGTAR SDY ---------- M G M Y ASYM A H N GFY S DLV V KASRQK N S F HVL 792
Cdd:PRK15313 710 GD la QWST D GLDRW --- H IG AMAGYANSQNRTLSSV SDY hsrgqvtgys V G L Y GTWY A N N IDR S GAY V DTWMLY N W F DNK 786
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1016498295 793 DSQNNGVNANGTA KG MSI S L EAG QRLN L SPTGY - GFYIE P QT Q LTYSHQNEMAMKAS NG LNIHLNHYES LL G R 864
Cdd:PRK15313 787 VMGQDQAAEKYKS KG ITA S V EAG YSFR L GESAH q SYWLQ P KA Q VVWMGVQADDNREA NG TLVKDDTAGN LL T R 859
PRK15313
PRK15313 intestinal colonization autotransporter adhesin MisL;
54-614
5.66e-16
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain]
Cd Length: 955
Bit Score: 82.92
E-value: 5.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 54 GT NITIND G DRIT G DT A DPSGNLYG V MTPA G NTPGNINL GND V T VNVND A SGY ----- AK GI IIQ G K N SS ------ L T AN 122
Cdd:PRK15313 76 GT IPVYGN G LTLN G PG A EAFEHTVT V IQNS G TGSPGVIF GND L T IRTQS A NAA nngrd VD GI RTH G A N TP dnpvfi I T GD 155
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 123 R LTVD V V GQ TSA i GIN L igdy THAD LG T G S T IKS N ddg I II G HSSTLTA T qftie N S N G I G L T I N DY ------ GTSVDL G 196
Cdd:PRK15313 156 R TRIY V D GQ DGD - GIN A ---- GYNS LG Q G W T GSA N --- I YV G DDLYIKT T ----- G S Q G R G I T A N AM rdasra KNTIVV G 222
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 197 SGSK I K T D G STGVYIGGLNGNNANG aarf TAT D L TI DVQ G Y S AM GI NVQKN S VVD LG T N S TI KT NG DN AH GLWS fgqvsa 276
Cdd:PRK15313 223 NRAH I V T T G DSSEGLRTGQSGSLIR ---- LGD D A TI ETS G A S ST GI YAASS S RTE LG N N A TI TV NG AS AH AVYA ------ 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 277 naltvdv T G A AA N gvevrggtttigadshissaqggglvt S G SD ATI N fsgtaaqrnsi FS S G S YG AS AQT A T A vinmqn 356
Cdd:PRK15313 293 ------- T N A TV N --------------------------- L G EN ATI S ----------- VN S A S KA AS YSK A P A ------ 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 357 tditvdrngslal GL W ALS G G R I tgd S LA ITG A AGAR G IYAMTNSQ I DLTSDLVI D M S TPDQMA I atqhd DG yaas R I N A 436
Cdd:PRK15313 322 ------------- GL Y ALS R G A I --- N LA GGA A ITMA G DNSSESYA I STETGGIV D G S SGGRFV I ----- DG ---- D I R A 376
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 437 S G RMLIN G SVLSKGGL I N L D M HPG S V W T G S S L -- S DNVNG G KLD V A M NNSV WN V TS N S N L DT L A L - S HS T VD F ASHGSTA 513
Cdd:PRK15313 377 A G ATAAS G TLPQQNST I K L N M TDN S R W D G A S Y it S ATAGT G VIS V Q M SDAT WN M TS S S T L TD L T L n S GA T IN F SHEDGEP 456
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 514 GTFT T L N v E NLS GN STFIMRAD V V geg N GVNNKG D L L NIS G SSA GN HVL A IR N --- Q G SEATT G N E VLT V VKTTD GT as F 590
Cdd:PRK15313 457 WQTL T I N - E DYV GN GGKLVFNT V L --- N DDDSET D R L QVL G NTS GN TFV A VN N igg A G AQTIE G I E IVN V AGNSN GT -- F 530
570 580
....*....|....*....|....
gi 1016498295 591 SAS S QVEL G G Y L Y D V RKN G T NW E L 614
Cdd:PRK15313 531 EKA S RIVA G A Y D Y N V VQK G K NW Y L 554
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
53-600
2.99e-08
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 57.85
E-value: 2.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 53 N G TNI TI NDGDRI TG D T ADPSGNLYGVMTPAGN T PGNINLGNDVTVNVND A SGYAKGIIIQGKNSSLTANRLTVDVVGQT 132
Cdd:COG3210 815 T G SGG TI TINTAT TG L T GTGDTTSGAGGSNTTD T TTGTTSDGASGGGTAG A NSGSLAATAASITVGSGGVATSTGTANAG 894
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 133 SAIGINLIGDYTHADLGTGS T IKSNDD G IIIGHSSTLT A TQFTIE N SNGIGLTINDYGTSVDLGSGSKIKTD G STGVYIG 212
Cdd:COG3210 895 TLTNLGTTTNAASGNGAVLA T VTATGT G GGGLTGGNAA A GGTGAG N GTTALSGTQGNAGLSAASASDGAGDT G ASSAAGS 974
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 213 GLN G NN AN G A ARFTATDLTIDVQGYSAM G INVQKNSVVDLGTNSTIKTN G DNAHGLWSFGQVS A N A LTVDVT G AA A N G VE 292
Cdd:COG3210 975 SAV G TS AN S A GSTGGVIAATGILVAGNS G TTASTTGGSGAIVAGGNGVT G TTGTASATGTGTA A T A GGQNGV G VN A S G IS 1054
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 293 VRGGTTTIGADSHISSAQGGGLVTS G SD A TINFS GT AAQRNS I FSS G SY G A S AQ T A T AVINMQNTDITVDRNGSLALGLW 372
Cdd:COG3210 1055 GGNAAALTASGTAGTTGGTAASNGG G GT A QASGA GT THTLGG I TNG G AT G T S GG T T T STGGVTASKVGGTTTVGATGTST 1134
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 373 A LSGGRIT G DSLAITGAAGAR G IYAMTNSQIDLTSDLVIDMS T PDQMAIATQHDDGYAASRINAS G RMLIN GS VLSK G GL 452
Cdd:COG3210 1135 A STEAAGA G TLTGLVAVSAVA G GASSASAGDTTAVAAATTTT T GSAINGGADSAATEGTAGTDLK G GDSTG GS TTTI G TT 1214
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 453 INLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLD T L A LSHSTVDF A SHGSTAGTFT T LNVENLSGN ST FIM 532
Cdd:COG3210 1215 NVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDAT T G A TAGAVSNG A TSTVAGNAGA T ATGSTVDIG ST SAT 1294
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1016498295 533 R A DVVGEGN G VNNKGDLLNISGSSA G NHVLAIRNQGSEATTG N EVLTVVK TT DGTASFSASSQVELGG 600
Cdd:COG3210 1295 S A GGSLDTT G NTAGANGATVGTGIG G TTATGTAVAAVNSGGV N AGGGTIN TT AANTGLNGGNGATDSA 1362
COG4625
COG4625 Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
50-955
4.66e-08
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain]
Cd Length: 900
Bit Score: 57.10
E-value: 4.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 50 G SQN G TNITIND G DRIT G DTADPS G NLY G VMTPAGNTP G NINL G NDVTVNVNDAS G YAK G IIIQ G KNSSLT A NRLTVDVV 129
Cdd:COG4625 3 G GGG G GGGGGGG G GTGG G GAGGGG G AGG G AGGGGAGGG G GGGG G GGGAGGGGGGG G TGG G GGGG G GGGGGG A GGGGGGGG 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 130 G QTSAI G INLI G DYTHADL G T G STIKSNDD G III G HSSTLTATQFTIENSN G I G LTINDY G TSVDLGS G SKIKTD G ST G V 209
Cdd:COG4625 83 G GGGGG G TGGV G GGGGGGG G G G GGGGGGGG G GGG G SAGGGGGGAGGAGGGG G G G AGGGGG G GGGGGAG G GGGGGA G GA G G 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 210 YI GG LN G NNAN G AARFTATDLTIDVQ G YSAM G INVQKNSVVDL G TNSTIKTN G DNAH G LWSF G QVSANALTVDVT G AAAN 289
Cdd:COG4625 163 GG GG GG G GGGG G GGGGGGGGGGGGGG G GGGN G GGGGGGGGGGG G GGGGGGGA G GGGG G GGGG G GGGGGGGGGGGG G GGGG 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 290 G VEVRG G TTTI G ADSHISSAQG GG LVTS G SDATINFS G TAAQRN S IFSS G SY G ASAQTATAVINMQNTDITVDRN G SLAL 369
Cdd:COG4625 243 G GGGGA G GGGG G GGGNGGGGGA GG GGGG G GGGSGGGG G GGGGGG S GGGG G GG G GGGGGGGGGGGGGGGGGGGGGG G GGGG 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 370 G LWALS GG RITGDSLAIT G A AGA R G IY A MTNSQIDLTSDLVIDMSTPDQMAIATQHDD G Y - AASRINAS G RMLIN G SVLS 448
Cdd:COG4625 323 G GGGGG GG GGGAGGGGGS G G AGA G G GG A GGGGAGGGGGGGTGGGGGGGGGGGGGSGGG G A g GGGGSGGG G GGGAG G GGGG 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 449 K G GLINLDMHP G SVWTGSSLSDNVN G GKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFASH G STA G TFTTLNVEN L S GN S 528
Cdd:COG4625 403 G G AGGTGGGGA G GGGGAAGGGGGGT G AGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGA G AGG G SGSGAGTLT L T GN N 482
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 529 T FI mradvvg EGNG VN NK G DLLNIS GS SA gnhvlairnqgse A TTGNEVLTVVKTTD GTA SFSASSQ V E L G G YL ydvr KN 608
Cdd:COG4625 483 T YT ------- GTTT VN GG G NYTQSA GS TL ------------- A VEVDAANSDRLVVT GTA TLNGGTV V V L A G GY ---- AP 538
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 609 GT NWELY A SGTVPEPTPNPEPTP A PAQPPIVNPDPTPAP A PTPKPTTTADAGGNY L -- NVGY L LNYVE NR TLMQ R MGDL - 685
Cdd:COG4625 539 GT TYTIL A VAAALDALAGNGDLS A LYNALAALDAAAARA A LDQLSGEIHASAAAA L lq ASRA L RDALS NR LRAL R GAGA a 618
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 686 - RNQSKDGNI W LRSY G GSL D SFAS G KLS G F D MGYS G IQF G G D K RL S D EMP L Y V G L YIGSTHASP D YS G GD G TAR S DYM G M 764
Cdd:COG4625 619 g DAAAEGWGV W AQGF G SWG D QDGD G GAA G Y D SSTG G LLV G A D Y RL G D NWR L G V A L GYSRSDVDV D DR G SS G DSD S YHL G L 698
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 765 Y AS Y MA h NGF Y S D LVVKASRQKNSFH --- VLDSQNNGVN A NGTAKGM S IS LEAG Q R LN L S ptgy G FYIE P QTQ L T Y SHQN 841
Cdd:COG4625 699 Y GG Y QF - GAL Y L D GGLGYGWNDYDTD rti AFGGLSRTAT A DYDGDTA S AF LEAG Y R FD L G ---- G LTLT P FAG L A Y VRLR 773
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 842 EMAMKASN G --- L NIHLNHYE SL LGRASMILGYDI - TA G NSQ L NVYVKT G AIR EF SG D ---- T EYLLNNSREKYSFK G -- 911
Cdd:COG4625 774 TDGFTETG G aaa L SVDSQSTD SL RSTLGLRASRTF s LG G GVT L TPSGRL G WRH EF GD D dpst T ASFAGAPGAAFTVA G ap 853
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 1016498295 912 --- NGWNN G V G V SA QYNKQHTFY L EA D YTQ G NLFDQKQVNG G Y R FS F 955
Cdd:COG4625 854 lar DALVL G A G L SA RLSDGLSLG L GY D GEF G SGYTDHGGSA G L R YR F 900
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
31-580
1.21e-07
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 55.93
E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 31 GAIGLNAIIFSPLLIAADL G SQNGTNITIND G DRIT G DTADPSGNLYGVMTPA G NTP G NINLGNDV T VN V ND A SGY A KG I 110
Cdd:COG3210 162 TNTNNSSSGTNIGNSIPTT G GSLNVVAANPT G VTGV G GALINATAGVLANAGG G TAG G VASANSTL T GG V VA A GTG A GV I 241
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 111 IIQ G KNS S LTANRLTVDVV G QTSAIGINLIGDY T HADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSNGI G L T INDYG 190
Cdd:COG3210 242 STG G TDI S SLSVAAGAGTG G AGGTGNAGNTTIG T TVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLG G G T AAGIT 321
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 191 T SVDL G SGSKI ---- KTD G STG V YI G GLNG N NAN G AARFTATDL T IDVQ G YSAM G INVQKNS V VDLGTNSTIKTNGDNAH 266
Cdd:COG3210 322 T TNTV G GNGDG nntt ANS G AGL V SG G TGGN N GTT G TGAGSGLTG T GNGG G LTTA G AGTVAST V GTATASTGNASSTTVLG 401
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 267 GLWSFGQVSANALTVDVTG A A A N G VEVR GG TTT I GADSHISSAQG GGL VT SG SDATINF SG TAAQRNSIFSSG S Y G ASAQ 346
Cdd:COG3210 402 SGSLATGNTGTTIAGNGGS A N A G G FTTT GG VLG I TGNGTVTGGTI GGL TG SG TTNGAGL SG NTDVSGTGTVTN S A G NTTS 481
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 347 TA T AVINMQN T DI T VDRNGSL A L G LWALSGGRI TG DSLAIT G AAG A RGIYAMTNSQIDLT S D L VIDM S TPDQMAI A TQHD 426
Cdd:COG3210 482 AT T LAGGGIG T VT T NATISNN A G G DANGIATGL TG ITAGGG G GGN A TSGGTGGDGTTLSG S G L TTTV S GGASGTT A ASGS 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 427 DGYAASRIN A SGRMLI N GSVLSKGGLINLDMHPG S VW T GS S LSDNVN G GKLDVAMNNSVWNVTS N SNLDTLA L SH S T V DF 506
Cdd:COG3210 562 NTANTLGVL A ATGGTS N ATTAGNSTSATGGTGTN S GG T VL S IGTGSA G ATGTITLGAGTSGAGA N ATGGGAG L TG S A V GA 641
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1016498295 507 A SH G STA GT FT T LNVENLSGNSTFIMRADVV G EGNG V NNKGDLLNISGSSAGNHVLAIR N Q G SEA T TGNEVL TV 580
Cdd:COG3210 642 A LS G TGS GT TG T ASANGSNTTGVNTAGGTGG G TTGT V TSGATGGTTGTTLNAATGGTLN N A G NTL T ISTGSI TV 715
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
51-600
1.53e-06
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 52.46
E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 51 SQN G TNI T I N D G DR I - T G DTADP S GN L YGVM T PA G N T PG - NINL GN DVTVNVN D AS G YAKG I I I QGKNSSLT A NRLTVD V 128
Cdd:COG3210 735 LGT G ATL T L N A G VT I t S G NAGTL S IG L TANT T AS G T T LT l ANAN GN TSAGATL D NA G AEIS I D I TADGTITA A GTTAIN V 814
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 129 V G QTSA I G IN ligdyt H A DL G TGS T IKSNDDGIIIGHSS T L T A T QFTIENSN G IGLTINDYGTSVDLGSGSKIKTDGSTG 208
Cdd:COG3210 815 T G SGGT I T IN ------ T A TT G LTG T GDTTSGAGGSNTTD T T T G T TSDGASGG G TAGANSGSLAATAASITVGSGGVATST 888
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 209 VYIGGLNGN N ANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAH G LWSFGQV SA NALTVDVTGAA A 288
Cdd:COG3210 889 GTANAGTLT N LGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALS G TQGNAGL SA ASASDGAGDTG A 968
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 289 NGVEVRGGTT T IGADSHISSAQGGGLVTSGSDATINFSG T AAQRNS I FSS G SYGASAQTATAVINMQNTDITVDR NG SLA 368
Cdd:COG3210 969 SSAAGSSAVG T SANSAGSTGGVIAATGILVAGNSGTTAS T TGGSGA I VAG G NGVTGTTGTASATGTGTAATAGGQ NG VGV 1048
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 369 LGLWALS G GRITGDSLAIT G AA G ARGIYAMTNSQIDLTSDLVIDMSTPDQMAI AT QHDD G YAA S RINASGRMLINGSVLS 448
Cdd:COG3210 1049 NASGISG G NAAALTASGTA G TT G GTAASNGGGGTAQASGAGTTHTLGGITNGG AT GTSG G TTT S TGGVTASKVGGTTTVG 1128
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 449 KG G LINLDMHPGSVW T GSS L SDNVNGGKLDVAMNNSVWNVTSNSNLD T LALSHSTVDFASHGSTAGTFTTLNVENLS G NS 528
Cdd:COG3210 1129 AT G TSTASTEAAGAG T LTG L VAVSAVAGGASSASAGDTTAVAAATTT T TGSAINGGADSAATEGTAGTDLKGGDSTG G ST 1208
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016498295 529 T F I MRAD V VGEGNGVNNKGDLLNIS G S S AGNHVLAIRNQ GS EAT TG NEVLTVVKTTDGTASF S ASSQVELGG 600
Cdd:COG3210 1209 T T I GTTN V TTTTTLTASDTGNTTAT G G S SAGQTGSFVAA GS ASG TG DATTGATAGAVSNGAT S TVAGNAGAT 1280
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
30-667
8.61e-06
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 50.15
E-value: 8.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 30 Y G AI G LNAIIFSPLLIAADLGSQ NGT NITIND G DRITGD T ADPS G NLYGVMTPAGN T PG N INLGNDVTVNVNDASGYAKG 109
Cdd:COG3210 415 A G NG G SANAGGFTTTGGVLGITG NGT VTGGTI G GLTGSG T TNGA G LSGNTDVSGTG T VT N SAGNTTSATTLAGGGIGTVT 494
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 110 IIIQGK N SSLTANRLTVDVVGQTS A I G INLIGDYTHADL G T G S T IKSNDDGIIIGHSSTL T ATQFTIENS N GI G LTINDY 189
Cdd:COG3210 495 TNATIS N NAGGDANGIATGLTGIT A G G GGGGNATSGGTG G D G T T LSGSGLTTTVSGGASG T TAASGSNTA N TL G VLAATG 574
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 190 GTS VDLGS G SKIKTD G S TG VYI GG LNGNNAN G A A RF T A T DLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTN G DNAH G LW 269
Cdd:COG3210 575 GTS NATTA G NSTSAT G G TG TNS GG TVLSIGT G S A GA T G T ITLGAGTSGAGANATGGGAGLTGSAVGAALSGT G SGTT G TA 654
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 270 S FGQVSANALTVDVTGAAANGVE V RG G T T TIGADSHISS A Q GG G L VTS G SDA TI NFSGTAAQRNSIFSSGSY G ASAQTAT 349
Cdd:COG3210 655 S ANGSNTTGVNTAGGTGGGTTGT V TS G A T GGTTGTTLNA A T GG T L NNA G NTL TI STGSITVTGQIGALANAN G DTVTFGN 734
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 350 AVINMQN T --- DI T VDRNGSLA L GLWALSGGRIT G DS L AITG A A G ARGIY A MTNSQIDLT S DLVIDMS T PDQMAIATQHD 426
Cdd:COG3210 735 LGTGATL T lna GV T ITSGNAGT L SIGLTANTTAS G TT L TLAN A N G NTSAG A TLDNAGAEI S IDITADG T ITAAGTTAINV 814
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 427 D G YAASRINASGRMLIN G SVLSKG G LINLD mhp GSVW T GSSL SD NVN GG KLDV A MNN S VWNVTSNSNLDTLALSH ST VDF 506
Cdd:COG3210 815 T G SGGTITINTATTGLT G TGDTTS G AGGSN --- TTDT T TGTT SD GAS GG GTAG A NSG S LAATAASITVGSGGVAT ST GTA 891
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 507 ASHGS T AGTF TT LNVENLSGNSTFIMRADVV G E G NGVN N KGDLLNIS G SSAGNHVLAIR N Q G SE A TTGNEVLTVVKTTDG 586
Cdd:COG3210 892 NAGTL T NLGT TT NAASGNGAVLATVTATGTG G G G LTGG N AAAGGTGA G NGTTALSGTQG N A G LS A ASASDGAGDTGASSA 971
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 587 TA S FSASSQVELG G YLYD V RKNGTNWELYA SGT VPEP T PNPEPTP A PAQPPIVNPDPTP A PAPTPKP T TTADA G GNYLNV 666
Cdd:COG3210 972 AG S SAVGTSANSA G STGG V IAATGILVAGN SGT TAST T GGSGAIV A GGNGVTGTTGTAS A TGTGTAA T AGGQN G VGVNAS 1051
.
gi 1016498295 667 G 667
Cdd:COG3210 1052 G 1052
PL2_Passenger_AT
cd01344 Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ...
441-614
2.85e-05
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.
Pssm-ID: 238654 [Multi-domain]
Cd Length: 188
Bit Score: 45.75
E-value: 2.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 441 LINGSVLSK GG LIN L DMHPGSVW T GSS L SDNVNG G KLDVAMNN -- S V WN V T SN S N L DTLA L SHS - T V D FASHGSTA GT F T 517
Cdd:cd01344 3 ITGNGGWKL GG DLT L GGGALTLT T SLT L TGTLLT G GAGTLTLD st S T WN I T GT S T L NVGN L TNA g T I D LGNGSPAG GT L T 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 518 T ln VE N LS GN S - T FIMRADV vgeg NGVNNKG D L L N I S G SSA G NHVL A IR N Q - GS E ATTGN -- EV LT V VK T TDGT A s FS AS 593
Cdd:cd01344 83 I -- TG N YT GN G g T LRLNTVL ---- GDDDSPT D R L V I D G DAS G TTRV A VN N A g GS G ATTGN gi EV VE V GG T SSNG A - FS LA 155
170 180
....*....|....*....|....*.
gi 1016498295 594 SQ V EL G G Y L Y DVRKN G T ----- NW E L 614
Cdd:cd01344 156 GR V VA G A Y E Y RLYRG G V sgndg NW Y L 181
FhaB
COG3210 Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
28-826
1.55e-04
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain]
Cd Length: 1698
Bit Score: 45.91
E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 28 IKY G AIGLNAIIFSPLLIAADLGSQN GT NITINDGDRIT G DTADPSGNLYGVMTPAGNTPG N INL G NDVTVNVNDASGYA 107
Cdd:COG3210 565 NTL G VLAATGGTSNATTAGNSTSATG GT GTNSGGTVLSI G TGSAGATGTITLGAGTSGAGA N ATG G GAGLTGSAVGAALS 644
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 108 KGIIIQGKNS S LTANRL T VDVVGQTSAI G INLIGDYTHADLG TG S T IKSNDD G IIIGHSS TLT ATQFT I ENSNG IG LTI N 187
Cdd:COG3210 645 GTGSGTTGTA S ANGSNT T GVNTAGGTGG G TTGTVTSGATGGT TG T T LNAATG G TLNNAGN TLT ISTGS I TVTGQ IG ALA N 724
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 188 DY G TS V DL G SGSK - IKTDGST GV Y I GGL N GNNANGAARFTA T DLTIDVQGYS A M G INVQKNSVVDL G TNST I KTNG D NAH 266
Cdd:COG3210 725 AN G DT V TF G NLGT g ATLTLNA GV T I TSG N AGTLSIGLTANT T ASGTTLTLAN A N G NTSAGATLDNA G AEIS I DITA D GTI 804
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 267 glwsfgq VS A NALTVD VTG AAAN g VEVRGG TT TIGADSHIS S AQ GG GLV T SGSDA T INFSGTAAQRNSIF S SGSYGAS A Q 346
Cdd:COG3210 805 ------- TA A GTTAIN VTG SGGT - ITINTA TT GLTGTGDTT S GA GG SNT T DTTTG T TSDGASGGGTAGAN S GSLAATA A S 876
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 347 TATAVINMQNTDI T VDRNGSLA LG LWALSGGRITGDSLAI T GAAGAR G IYAMT N SQIDL T SDLVIDMSTPDQMAI A TQHD 426
Cdd:COG3210 877 ITVGSGGVATSTG T ANAGTLTN LG TTTNAASGNGAVLATV T ATGTGG G GLTGG N AAAGG T GAGNGTTALSGTQGN A GLSA 956
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 427 DGYAASRINASGRMLING S VLSKGGLINLDMHPGSVW TG SSLSD N VNGGKLDVAMNNSVWNVTSNSNLD T LAL S HSTVDF 506
Cdd:COG3210 957 ASASDGAGDTGASSAAGS S AVGTSANSAGSTGGVIAA TG ILVAG N SGTTASTTGGSGAIVAGGNGVTGT T GTA S ATGTGT 1036
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 507 A SHGSTAGTFTTLNVENLS GN STFIMRADVV G EGN G VNNKGDLLNISGS S AGNHVLAIRNQGSEAT TG NEVL T VVK T TDG 586
Cdd:COG3210 1037 A ATAGGQNGVGVNASGISG GN AAALTASGTA G TTG G TAASNGGGGTAQA S GAGTTHTLGGITNGGA TG TSGG T TTS T GGV 1116
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 587 TAS FSASSQVELGGYLYDVRKNGTNWELYASGTVPEPTPNPEPTPAPAQPPI V NPDP T PAPAPTPKPTTTAD A GGNYLNV 666
Cdd:COG3210 1117 TAS KVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTA V AAAT T TTTGSAINGGADSA A TEGTAGT 1196
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 667 GYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFAS G KLSG F DMGY S GIQF G GDKRLSDEMPLYV G LYIGSTHA 746
Cdd:COG3210 1197 DLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSA G QTGS F VAAG S ASGT G DATTGATAGAVSN G ATSTVAGN 1276
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 747 SPDYSG G DGTARSDYMGMY A SYMAHNGFYSDLVVK A SRQKNSFHVLDSQNNGVNA N GTAKGMSISLEAGQRL N LSPT G YG 826
Cdd:COG3210 1277 AGATAT G STVDIGSTSATS A GGSLDTTGNTAGANG A TVGTGIGGTTATGTAVAAV N SGGVNAGGGTINTTAA N TGLN G GN 1356
PRK15319
PRK15319 fibronectin-binding autotransporter adhesin ShdA;
661-853
4.50e-03
fibronectin-binding autotransporter adhesin ShdA;
Pssm-ID: 185219 [Multi-domain]
Cd Length: 2039
Bit Score: 41.22
E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 661 G N Y LNVGYLLNYVENR TL MQ R M G D l RNQSK DG NI W L R SYG G SLD S F A SGKLSGF D MG YS GI Q F GGD KRL -- SDEMPLY VG 738
Cdd:PRK15319 1732 G A Y MGNQWMARNLQMQ TL YD R E G S - QYRNA DG SV W A R FKA G KAE S E A VSGNIDM D SN YS QF Q L GGD ILA wg NGQQSVT VG 1810
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016498295 739 LYIGSTH A SP D YS G GD G TAR S DY ---------- M G M YA SYM A ---- H N G F Y S D LVVKASRQK NS FHVL D SQNNGVNANGT 804
Cdd:PRK15319 1811 VMASYIN A DT D ST G NR G ADG S QF tssgnvdgyn L G V YA TWF A daqt H S G A Y V D SWYQYGFYN NS VESG D AGSESYDSTAN 1890
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1016498295 805 A kgms I SLE A G Q R LNLS - PT G YGFYIE PQ T Q LTYSHQNEMAM K ASN G LN I 853
Cdd:PRK15319 1891 A ---- V SLE T G Y R YDIA l SN G NTVSLT PQ A Q VVWQNYSADSV K DNY G TR I 1936
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
