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Conserved domains on  [gi|983103072|ref|WP_060441103|]
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MULTISPECIES: fimbrial protein [Enterobacterales]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-179 3.58e-49

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 156.74  E-value: 3.58e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   1 MLKTRLGLCLLFIAPLSIAgnkwnvTLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHL 80
Cdd:COG3539    1 MKKLLLALLLALALSAAAA------AAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  81 QDCNPNVSDRVGIVFHGVADGKNPDVLSVgEGEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATG 160
Cdd:COG3539   75 TNCDAGTSNSVKVTFTGTADSANPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 983103072 161 NTVIGGAANAQAWFSLTYQ 179
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-179 3.58e-49

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 156.74  E-value: 3.58e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   1 MLKTRLGLCLLFIAPLSIAgnkwnvTLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHL 80
Cdd:COG3539    1 MKKLLLALLLALALSAAAA------AAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  81 QDCNPNVSDRVGIVFHGVADGKNPDVLSVgEGEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATG 160
Cdd:COG3539   75 TNCDAGTSNSVKVTFTGTADSANPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 983103072 161 NTVIGGAANAQAWFSLTYQ 179
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
10-179 6.10e-33

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 115.82  E-value: 6.10e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  10 LLFIAPLSIAGNKWNVTLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSD 89
Cdd:PRK15194  13 LLFVAGAAYAADPTPVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCDPVVAA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  90 RVGIVFHGVADGKNPDVLSVGEGEG--IASGVGIALFDEQGQ-LIPINSEPQSWKPLTKGTRILQFVAKYRATGNTVIGG 166
Cdd:PRK15194  93 TAAVAFSGQADATNDNLLAVASSTNttTATGVGIEILDNTSSiLKPDGATFSANQNLIEGTNTLHFSARYKATGTSASAG 172

                        170
                 ....*....|...
gi 983103072 167 AANAQAWFSLTYQ 179
Cdd:PRK15194 173 QANADATFIMKYE 185
Fimbrial pfam00419
Fimbrial protein;
34-179 5.04e-26

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 97.12  E-value: 5.04e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   34 FQGEL--IAEACTVEAGDrQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSDRVGIVFHGVADGKNPDVLSVGE 111
Cdd:pfam00419   3 FTGTVtrVPATCKITAGT-PIEVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLLTGN 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 983103072  112 GEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGT--RILQFVAKYRAT-GNTVIGGAANAQAWFSLTYQ 179
Cdd:pfam00419  82 GAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAvaTGITFTASLVATtGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-179 3.58e-49

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 156.74  E-value: 3.58e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   1 MLKTRLGLCLLFIAPLSIAgnkwnvTLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHL 80
Cdd:COG3539    1 MKKLLLALLLALALSAAAA------AAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  81 QDCNPNVSDRVGIVFHGVADGKNPDVLSVgEGEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATG 160
Cdd:COG3539   75 TNCDAGTSNSVKVTFTGTADSANPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 983103072 161 NTVIGGAANAQAWFSLTYQ 179
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
10-179 6.10e-33

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 115.82  E-value: 6.10e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  10 LLFIAPLSIAGNKWNVTLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSD 89
Cdd:PRK15194  13 LLFVAGAAYAADPTPVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCDPVVAA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  90 RVGIVFHGVADGKNPDVLSVGEGEG--IASGVGIALFDEQGQ-LIPINSEPQSWKPLTKGTRILQFVAKYRATGNTVIGG 166
Cdd:PRK15194  93 TAAVAFSGQADATNDNLLAVASSTNttTATGVGIEILDNTSSiLKPDGATFSANQNLIEGTNTLHFSARYKATGTSASAG 172

                        170
                 ....*....|...
gi 983103072 167 AANAQAWFSLTYQ 179
Cdd:PRK15194 173 QANADATFIMKYE 185
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
1-178 2.93e-32

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 113.80  E-value: 2.93e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   1 MLKTRLGLCLLFIAPLSIAGNkwnVTLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDAD-PVPFSLH 79
Cdd:PRK15200   1 MIRKGAALVGLVLMSPVIAQP---VMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLR 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  80 LQDCNPNVSDRVGIVFHGVADGKNPDV-LSVGEGEGiASGVGIALFDEQG-QLIPiNSEPQSWKPLTKGTRILQFVAKYR 157
Cdd:PRK15200  78 LISCSAEVWRHVGIAFAGVTPAEDPHVfLASGEGIG-NAGIGLALFDDQQrQIIP-NTLPLHYAPILTSEMTLHFTARYR 155

                        170       180
                 ....*....|....*....|.
gi 983103072 158 ATGNTVIGGAANAQAWFSLTY 178
Cdd:PRK15200 156 AISENMTPGRIHSEVWFTLVY 176
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 30-179 2.13e-30

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 108.90  E-value: 2.13e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  30 GQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSDRVGIVFHGVADGKNPDVLSV 109
Cdd:PRK15209  26 GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVGDADDSTLVSV 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072 110 GEGEGIASGVGIALFDEQGQLIPINSePQSWKPLTKGTRILQFVAKYRATGNTVIGGAANAQAWFSLTYQ 179
Cdd:PRK15209 106 STEAGAATGVGIGIYDNANTLVELNT-GKSTTTLAAGQTVLYFTANYVSTKDTVTTGYGNAEVDFNLSYE 174
Fimbrial pfam00419
Fimbrial protein;
34-179 5.04e-26

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 97.12  E-value: 5.04e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   34 FQGEL--IAEACTVEAGDrQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSDRVGIVFHGVADGKNPDVLSVGE 111
Cdd:pfam00419   3 FTGTVtrVPATCKITAGT-PIEVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLLTGN 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 983103072  112 GEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGT--RILQFVAKYRAT-GNTVIGGAANAQAWFSLTYQ 179
Cdd:pfam00419  82 GAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAvaTGITFTASLVATtGGTPTAGDFNATATIVVDYQ 152
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 30-179 3.27e-23

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 90.55  E-value: 3.27e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  30 GQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSDrVGIVFHGVADGKNPDVLSV 109
Cdd:PRK15191  23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASG-VTVSFSGAADSRNTDLLAL 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 983103072 110 GEGEGIASGVGIALFDEQGQLIPINSEPQ--SWKPlTKGTRILQFVAKYRATGNTVIGGAANAQAWFSLTYQ 179
Cdd:PRK15191 102 TAGESDASGIGIALYDQNKTLIPLGQESDvvTLSP-GQASAHLQFYARYLADGGAVTPGDANASATFILAYE 172
PRK09934 PRK09934
fimbriae assembly protein;
8-178 9.14e-18

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 76.08  E-value: 9.14e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   8 LCLLFIAPLSIAGNkwnvtlPGGQMRFQ--GELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNP 85
Cdd:PRK09934   9 FCGLLWSPLSWAAD------PLGEINIElhGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  86 NvsdRVGIVFHGVaDGKNPDVLSVGEGeGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATGNTVIG 165
Cdd:PRK09934  83 G---SASITFTGT-PASDTNLLALDDP-AMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQP 157

                        170
                 ....*....|...
gi 983103072 166 GAANAQAWFSLTY 178
Cdd:PRK09934 158 GVAKADATFMINY 170
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 32-179 3.19e-17

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 75.12  E-value: 3.19e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  32 MRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCNPNVSDrVGIVFHGVADGKNPDVLSV-- 109
Cdd:PRK15190  30 LEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAG-AKIWFTGEPDPDNPALLAItd 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 983103072 110 ---GEGEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATGNTVIGGAANAQAWFSLTYQ 179
Cdd:PRK15190 109 tgmGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK09733 PRK09733
fimbrial-like protein;
30-179 9.69e-17

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 73.83  E-value: 9.69e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  30 GQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKdAGDDADPVPFSLHLQDC----NPNVSDRVGIVFHGVA-DGKNP 104
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCmlsqGGTTYSKAKVTFTTANtMTGQS 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 983103072 105 DVL-SVGEGE-GIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATGNTVIGGAANAQAWFSLTYQ 179
Cdd:PRK09733 105 DLLkNTKETEiGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE 181
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 26-178 1.18e-16

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 73.70  E-value: 1.18e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  26 TLPGGQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVP-FSLHLQDCNPNVSDRVGIVFHGVADGKNP 104
Cdd:PRK15187  28 TVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEdFTIKLEDCDTQTSQNAAVIFNGQQDANQP 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 983103072 105 DVLSVGEGEGIASGVGIALFDEQGQLIPInSEPQSWKPLTKGTRILQFVAKYRATGnTVIGGAANAQAWFSLTY 178
Cdd:PRK15187 108 GSLANTAGAGSATNVALQLYGPDGQALNI-GESSSTVTLNDGENVIPLSVDYIATG-TATAGNVTATATFSMVY 179
lpfA PRK15289
fimbrial protein; Provisional
 30-179 7.57e-16

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 71.53  E-value: 7.57e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  30 GQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCnPNVSDRVGIVFHGV----------- 98
Cdd:PRK15289  26 GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENC-PATYTQAAVRFDGTeapggdgdlkv 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  99 ---ADGKNPDVLSvGEGEGI-ASGVGIALFDEQGQLIPINSEPQSWKPL-TKGTRILQFVAKYRATGNTVIGGAANAQAW 173
Cdd:PRK15289 105 gtpLTAGNPGDFT-GTGQAIaATGVGIRIFNQSDNSQVKLYNDSAYTAIdAEGKAEMKFIARYVATNATVTAGTANADSQ 183


                 ....*.
gi 983103072 174 FSLTYQ 179
Cdd:PRK15289 184 FTVEYK 189
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 23-179 2.25e-15

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 70.11  E-value: 2.25e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  23 WNV--TLPGG--QMRFQGELIAEACT-VEAGDRQLVVRMGQVSSNRFkDAGDDADPVPFSLHLQDCNPNVSDRVGIVFHG 97
Cdd:PRK15260  18 WAVcnTLPAAtpNVHYSGKLVAGACNlVVDNDTMATVDFHTIGSDNF-DASGQTTPVPFTLSLQDCKTALANGVLVTFQG 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  98 VADGKNPDVLSVgEGEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRAT-GNTVIGGAANAQAWFSL 176
Cdd:PRK15260  97 VEDSTLPGLLAL-EPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYaGEEVMPGEFSGSATVSF 175


                 ...
gi 983103072 177 TYQ 179
Cdd:PRK15260 176 EYQ 178
PRK15296 PRK15296
fimbrial protein SthA;
34-179 2.38e-14

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 67.42  E-value: 2.38e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  34 FQGELIAEACTVEA-GDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDC---NPNVSDRVGIVFHGVADGKNPDVL-S 108
Cdd:PRK15296  28 FNGKIYDQACTVQVnGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCpeaGTGVPTQAMFRFHGATDDSNPTYFkN 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 983103072 109 VGEG-EGIASGVGIALFDEQGQLIPINSEPQSWK-PLTKGTRILQFVAKYRATGN-TVIGGAANAQAWFSLTYQ 179
Cdd:PRK15296 108 ADEGsETGAAGVGISIQNASHSDVTDNTDDAAVNlPTDGSTADFTYYAAMANDGSaTVTGGDVSTQVTYTVSYQ 181
PRK15210 PRK15210
fimbrial protein;
30-178 3.23e-14

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 67.42  E-value: 3.23e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  30 GQMRFQGELIAEACTVEAGDRQLVVRMGQVSSNRFKDAGDDADPVPFSLHLQDC--NPNVSD---------RVGIVFHGV 98
Cdd:PRK15210  35 GKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafDPNIPDtagsagkmsKVTVSFSGT 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  99 ADGKNPDVLSvgegEGIASGVGIALFDEQGQLIpinSEPQSWKP------LTKGTRILQFVAKYRATGNTVIGGAANAQA 172
Cdd:PRK15210 115 ANTSKKAYTT----SGSAQHVGVQLLKSDNTSI---IEPNTPMPdgdaqqLQAGNNELNFFARLIALDNGVTPGDFNASV 187


                 ....*.
gi 983103072 173 WFSLTY 178
Cdd:PRK15210 188 TYTLKY 193
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 1-179 3.63e-12

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 61.41  E-value: 3.63e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   1 MLKTRLGLCLLfiaPLSIAGNKWNVTL-PGGQMRFQGELIAEACTVEAGDrqLVVRMGQVSSNRFKDAGDDADPVPFSLH 79
Cdd:PRK15205   3 NKRALLPLALL---LLTASGMAAPTDLgPAGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKPVKVGTELNQKNFSIG 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  80 LQDCNPNVsdRVGIVFHGVADGKNPDVLSVGEGEgiASGVGIALFDEQG-QLIPINSE--PQSWKPLTKGTRILQFVAKY 156
Cdd:PRK15205  78 LKDCDGIS--KASVTMDGSPDPDDPSLFALDAGG--ATGVALKIKTSKGtQQYPKSTDgtPVEWAINGDGTTQLNYIASY 153

                        170       180
                 ....*....|....*....|...
gi 983103072 157 RATGNTVIGGAANAQAWFSLTYQ 179
Cdd:PRK15205 154 VPVNADATVGTANATVNFSVTYE 176
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 2-178 1.28e-11

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 60.11  E-value: 1.28e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   2 LKT-RLGLCLLFIAPLSIAGnkwnvTLPGGQMRFQGELIAEACTVEAGDRQlvVRMGQVSSNRFKDAGDDADPVPFSLHL 80
Cdd:PRK15300   5 LKTlTVALAAITLSPAALAD-----TAKDGTVHITGLIKQNACTVKTDSVE--VTLQEEFASLFTAAGQTAGDTDFTIEL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  81 QDCNPNVSDRVGIVFHGVADGKNPDVLsvgEGEGIASGVGIALFDEQGQLIPINsEPQSWK-----PLTKGTRILQ--FV 153
Cdd:PRK15300  78 ENCDANVYSSVQARFEGTLDGTDATIL---KNEDDAENIGVQILDKTSTPMTFN-DLQAWSaavalPTAEGVTELSmpFT 153

                        170       180
                 ....*....|....*....|....*
gi 983103072 154 AKYRATGNTVIGGAANAQAWFSLTY 178
Cdd:PRK15300 154 ARYIATAVPVKSGTVDATATFYLQY 178
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 8-178 3.60e-05

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 42.33  E-value: 3.60e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072   8 LCLLFIAPLSIAGNkwnvtlpggqMRFQGELIAEACTVEAGDRQLV-VRMGQVSSNRFKDAGDDADPvPFSLHLQDCNPN 86
Cdd:PRK15288  15 LCGALILPVSAADN----------LHFSGSLVASPCTLTMQGTGIAeVDFSSLDSSDFTPDGQSARK-PLVFELTDCDSA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  87 VSDRVGIVFHGVADGKNPDVLSVGEGEGiASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVA-KYRATGNTVIG 165
Cdd:PRK15288  84 LSNGVQVTFTGTEATGMRGILAIDSYSG-ASGIGIGIETLSGVPVGMNDEEGAIFTLVTGKNTLSLNAwVQRLPGEDLIP 162

                        170
                 ....*....|...
gi 983103072 166 GAANAQAWFSLTY 178
Cdd:PRK15288 163 GRFSASALATFEY 175
PRK15220 PRK15220
fimbrial protein YehD;
30-170 6.39e-04

fimbrial protein YehD;


Pssm-ID: 237928  Cd Length: 178  Bit Score: 38.64  E-value: 6.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  30 GQMRFQGELIAEACTVEaGDRQLVVRMGQVSSNRFKD--AGDDADPV--PFSLHLQ-DCNPNVSDRvgIVFHGVADGKNP 104
Cdd:PRK15220  28 GELKINGKVVGTTCQFL-GTNSATIELNQVGVDRLANlnPGQIYTGYtnPTAMPLKvKCTQGAAPR--ISFSRSQFVDNM 104

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 983103072 105 DVlSVGEGEGIASGVGIALFDEQGQLIPINSEPQSWKPLTKGTRILQFVAKYRATGNTVIGGAANA 170
Cdd:PRK15220 105 DI-TKNNGSANGAGFAVYYDGTDVKPDPETGVTLNPNKFENGVYTLNFSARYARVDNDVTSGDVES 169
PRK15293 PRK15293
fimbrial protein SthD;
36-139 7.39e-04

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 38.50  E-value: 7.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 983103072  36 GELIAEACTVEAGDrqlVVRMGQVSSNRFKDAGDDADPVPFSLHLQDCnPNVSDRVGIVFHGVA--DGKNPDVLSVGEGE 113
Cdd:PRK15293  41 GLIYADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFTIKMTNC-PATTTKAAISFNGVPypDPNYASAIYANSAA 116

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 983103072 114 GIASGVGIALFDEQGQ-----------LIPINSEPQS 139
Cdd:PRK15293 117 NPAQDLGLQLFNLDGKslvnlannvtyTVDINSNTHE 153
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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