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Conserved domains on  [gi|974586468|ref|WP_059176767|]
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ATP synthase F1 subunit gamma [Thermodesulfovibrio aggregans]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10000722)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-290 1.74e-137

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 439994  Cd Length: 288  Bit Score: 389.89  E-value: 1.74e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP--EYDHPLLEEREVKRVGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  81 LVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELIN 160
Cdd:COG0224   79 IVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLD 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 161 SYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQA 240
Cdd:COG0224  159 AFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 974586468 241 AEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:COG0224  239 SEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-290 1.74e-137

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 389.89  E-value: 1.74e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP--EYDHPLLEEREVKRVGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  81 LVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELIN 160
Cdd:COG0224   79 IVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLD 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 161 SYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQA 240
Cdd:COG0224  159 AFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 974586468 241 AEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:COG0224  239 SEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-290 2.82e-128

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 366.36  E-value: 2.82e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVETRgdlPPLLIRRPIKTVEV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD---HPLLVEREVKRVGY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  81 LVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELIN 160
Cdd:PRK05621  78 IVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLD 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 161 SYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIpftYEPRAPELFAMLLPIYIEIQIYRALLESQA 240
Cdd:PRK05621 158 AYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYE---YEPDAEEILDALLPRYVESQIYQALLENKA 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 974586468 241 AEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:PRK05621 235 SEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
ATP-synt pfam00231
ATP synthase;
3-289 5.37e-127

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 363.00  E-value: 5.37e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468    3 SLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEVLV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASP--EDSHPLLERREVKKVGLIV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   83 ITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTG-ISGKLQYTHAQMIAQELINS 161
Cdd:pfam00231  79 ITSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  162 YVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISsESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQAA 241
Cdd:pfam00231 159 FLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEE-EEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 974586468  242 EEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEA 289
Cdd:pfam00231 238 EQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-286 7.17e-111

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 322.22  E-value: 7.17e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   2 PSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEVL 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLD--DEDPPLLEKREVKKVLLI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  82 VITSDKGLCGAFNTNILRVAAKEIDriKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELINS 161
Cdd:cd12151   79 VITSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILD 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 162 YVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQAA 241
Cdd:cd12151  157 FLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLAS 236

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 974586468 242 EEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGG 286
Cdd:cd12151  237 EQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSG 281
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-290 9.44e-110

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 319.62  E-value: 9.44e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468    2 PSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAveTRGDLPPLLIRRPIKTVEVL 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATK--LLNVDHPLLKSREVKKVGIL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   82 VITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELINS 161
Cdd:TIGR01146  79 VITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  162 YVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIpFTYEPRAPELFAMLLPIYIEIQIYRALLESQAA 241
Cdd:TIGR01146 159 FDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQD-YIFEPDEEEILDDLLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 974586468  242 EEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:TIGR01146 238 EQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-290 1.74e-137

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 389.89  E-value: 1.74e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP--EYDHPLLEEREVKRVGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  81 LVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELIN 160
Cdd:COG0224   79 IVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLD 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 161 SYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQA 240
Cdd:COG0224  159 AFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 974586468 241 AEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:COG0224  239 SEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-290 2.82e-128

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 366.36  E-value: 2.82e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVETRgdlPPLLIRRPIKTVEV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD---HPLLVEREVKRVGY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  81 LVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELIN 160
Cdd:PRK05621  78 IVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLD 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 161 SYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIpftYEPRAPELFAMLLPIYIEIQIYRALLESQA 240
Cdd:PRK05621 158 AYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYE---YEPDAEEILDALLPRYVESQIYQALLENKA 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 974586468 241 AEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:PRK05621 235 SEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
ATP-synt pfam00231
ATP synthase;
3-289 5.37e-127

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 363.00  E-value: 5.37e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468    3 SLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEVLV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASP--EDSHPLLERREVKKVGLIV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   83 ITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTG-ISGKLQYTHAQMIAQELINS 161
Cdd:pfam00231  79 ITSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  162 YVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISsESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQAA 241
Cdd:pfam00231 159 FLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEE-EEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 974586468  242 EEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEA 289
Cdd:pfam00231 238 EQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-291 2.32e-125

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 358.99  E-value: 2.32e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEV 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAG--EDAHPLLVPREVKKALL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  81 LVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELIN 160
Cdd:PRK13423  79 VVVTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIE 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 161 SYVSEAVDEVLVIYNEFKSVISQRVVINRILPIgrISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQA 240
Cdd:PRK13423 159 GYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPI--DPPEAADDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVA 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 974586468 241 AEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEALK 291
Cdd:PRK13423 237 SEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEALK 287
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-286 7.17e-111

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 322.22  E-value: 7.17e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   2 PSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLLIRRPIKTVEVL 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLD--DEDPPLLEKREVKKVLLI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  82 VITSDKGLCGAFNTNILRVAAKEIDriKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELINS 161
Cdd:cd12151   79 VITSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILD 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 162 YVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQAA 241
Cdd:cd12151  157 FLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLAS 236

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 974586468 242 EEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGG 286
Cdd:cd12151  237 EQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSG 281
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-290 9.44e-110

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 319.62  E-value: 9.44e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468    2 PSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAveTRGDLPPLLIRRPIKTVEVL 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATK--LLNVDHPLLKSREVKKVGIL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   82 VITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELINS 161
Cdd:TIGR01146  79 VITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  162 YVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIpFTYEPRAPELFAMLLPIYIEIQIYRALLESQAA 241
Cdd:TIGR01146 159 FDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQD-YIFEPDEEEILDDLLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 974586468  242 EEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:TIGR01146 238 EQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-291 7.19e-99

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 292.03  E-value: 7.19e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVEtrGDLPPLL-IRRPIKTVE 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRAD--SSAHPLLeVREEIKTCG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  80 VLVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELI 159
Cdd:PRK13424  79 IVLITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQLANSIGLEVI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 160 NSYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRALLESQ 239
Cdd:PRK13424 159 DGYLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTS 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 974586468 240 AAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEALK 291
Cdd:PRK13424 239 ASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALK 290
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-292 1.94e-83

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 252.81  E-value: 1.94e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVETrgDLPPLL-IRRPIKTVE 79
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDT--SLNPLLsPRSEVNKVL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  80 VLVITSDKGLCGAFNTNILRVAAKEIDR----IKKEGlNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIA 155
Cdd:PRK13425  79 VILITSDRGLCGAFNTNIIKLAQKVIHEdyaaLHAKG-GVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIA 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 156 QELINSYVSEAVDEVLVIYNEFKSVISQRVVINRILPIgriSSESSEQPTFIPFTYEPRAPELFAMLLPIYIEIQIYRAL 235
Cdd:PRK13425 158 ETASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPI---TPEKPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMM 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 974586468 236 LESQAAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEALKQ 292
Cdd:PRK13425 235 LESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQG 291
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-292 9.81e-83

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 250.87  E-value: 9.81e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVETRGDLPPLLIRRP-IKTVE 79
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVGAARVGPLLEKRPtVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  80 VLVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQELI 159
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 160 NSYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIpftYEPRAPELFAMLLPIYIEIQIYRALLESQ 239
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVVDYT---YEPSPEEVLRALLPRFVEVQLYQAVLESI 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 974586468 240 AAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEALKQ 292
Cdd:PRK14111 238 ASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALGS 290
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-291 4.53e-81

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 246.60  E-value: 4.53e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSL--RDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAVETrgDLPPLLIRRPIKTV 78
Cdd:PRK14110   1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDR--ESHPLLERREEKNV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  79 EVLVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGK-LQYTHAQMIAQE 157
Cdd:PRK14110  79 DLVIITADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDVFRKeINFSVVKEVGGI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 158 LINSYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIpFTYEPRAPELFAMLLPIYIEIQIYRALLE 237
Cdd:PRK14110 159 LASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEKKLDELSV-YNIEVSEEEFLDKLLQLYLNYQLYRALVE 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 974586468 238 SQAAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEALK 291
Cdd:PRK14110 238 SNAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-290 3.21e-67

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 211.18  E-value: 3.21e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGA---VETrgdlpPLLIRRPIKT 77
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSAdldVES-----PFTVERPVKR 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  78 VEVLVITSDKGLCGAFNTNILRVAAKEIDRIKKEGL-NVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIAQ 156
Cdd:PRK13426  76 VAIVVFSSNTSLCGGFNANIIKLLLQTIGEYRTLGQdNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAM 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 157 ELINSYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSESSEQPTFIPFTY--EPRAPELFAMLLPIYIEIQIYRA 234
Cdd:PRK13426 156 RLMELFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAEHAGGVANDYiiEPSADTVLNDLIPKLLSLKIYTA 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 974586468 235 LLESQAAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:PRK13426 236 LLDSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-290 3.71e-64

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 203.63  E-value: 3.71e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQV---LADLAGAVETrgdlpPLLiRRP--I 75
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELvssLASLEGVVHS-----PYL-RRPekI 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  76 KTVEVLVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYFKRRDIPVKNVWTGISGKLQYTHAQMIA 155
Cdd:PRK13427  75 RTVALLIITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELA 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 156 QELINSYVSEAVDEVLVIYNEFKSVISQRVVINRILPI--GRISSESSEQPTFIpftYEPRAPELFAMLLPIYIEIQIYR 233
Cdd:PRK13427 155 NLFMERFANESVDAVEIASTVYYSAASQKPETTRVLPLepPTAAAEGSVQDDVV---YEPSPEAILESLLPLVVKTAFLK 231

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 974586468 234 ALLESQAAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:PRK13427 232 AILEANASEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-290 6.56e-38

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 135.95  E-value: 6.56e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468   1 MPSLRDIRKKIKAIQGTKKITSAMKMVAAAKLRKVQDSMLRYRPYASKMQQVLADLAGAvetRGDLP-PLLIRRPIKTVE 79
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAA---SIDYPnPYLFDRDVKRVG 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468  80 VLVITSDKGLCGAFNTNILRVAAKEIDRIKKEGLNVSISVVGRKARDYF-KRRDIPVKNV--WTGISGKLQYTHAQMIAQ 156
Cdd:PRK13422  78 YIVTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFaKLKDVNIVATahYNDKDKEGSIRAIGGAVK 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974586468 157 ELINSYVSEAVDEVLVIYNEFKSVISQRVVINRILPIGRISSE-----SSEQPT--FIPFTYEPRAPELFAMLLPIYIEI 229
Cdd:PRK13422 158 VMLDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAeeikaNKEKATkgHWDYIYERDIEEVLNALCIRYIEA 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 974586468 230 QIYRALLESQAAEEAARMTAMDNATKNCDELIKKTTLIANKVRQASITKELMDIVGGVEAL 290
Cdd:PRK13422 238 QVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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