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Conserved domains on  [gi|970319603|ref|WP_058686758|]
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MULTISPECIES: LPD7 domain-containing protein [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LPD7 pfam18821
Large polyvalent protein-associated domain 7; This domain contains conserved aspartate and ...
 220-300 4.15e-06

Large polyvalent protein-associated domain 7; This domain contains conserved aspartate and phenylalanine residues. It is widely present in polyvalent proteins and gene neighbourhoods of conjugative elements. This domain is also known as PTox1.


:

Pssm-ID: 465879 [Multi-domain]  Cd Length: 92  Bit Score: 44.55  E-value: 4.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970319603  220 KRIVYFKDNTQLLE-KTDSIVVMARNQIDSARRLVLVAKEKgWNTVTFQGNSSFLENAYLQAVQNGVGVKPLSEEQRQFY 298
Cdd:pfam18821  10 DGTVYYRDGRPAFRdRGDRLTVTSSDDPEAIRAALRLAQAK-WGSIRVTGSEEFKRRAWRAAAERGLEVTFEDPDLEALR 88


                  ..
gi 970319603  299 RE 300
Cdd:pfam18821  89 QA 90
 
Name Accession Description Interval E-value
LPD7 pfam18821
Large polyvalent protein-associated domain 7; This domain contains conserved aspartate and ...
 220-300 4.15e-06

Large polyvalent protein-associated domain 7; This domain contains conserved aspartate and phenylalanine residues. It is widely present in polyvalent proteins and gene neighbourhoods of conjugative elements. This domain is also known as PTox1.


Pssm-ID: 465879 [Multi-domain]  Cd Length: 92  Bit Score: 44.55  E-value: 4.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970319603  220 KRIVYFKDNTQLLE-KTDSIVVMARNQIDSARRLVLVAKEKgWNTVTFQGNSSFLENAYLQAVQNGVGVKPLSEEQRQFY 298
Cdd:pfam18821  10 DGTVYYRDGRPAFRdRGDRLTVTSSDDPEAIRAALRLAQAK-WGSIRVTGSEEFKRRAWRAAAERGLEVTFEDPDLEALR 88


                  ..
gi 970319603  299 RE 300
Cdd:pfam18821  89 QA 90
 
Name Accession Description Interval E-value
LPD7 pfam18821
Large polyvalent protein-associated domain 7; This domain contains conserved aspartate and ...
 220-300 4.15e-06

Large polyvalent protein-associated domain 7; This domain contains conserved aspartate and phenylalanine residues. It is widely present in polyvalent proteins and gene neighbourhoods of conjugative elements. This domain is also known as PTox1.


Pssm-ID: 465879 [Multi-domain]  Cd Length: 92  Bit Score: 44.55  E-value: 4.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 970319603  220 KRIVYFKDNTQLLE-KTDSIVVMARNQIDSARRLVLVAKEKgWNTVTFQGNSSFLENAYLQAVQNGVGVKPLSEEQRQFY 298
Cdd:pfam18821  10 DGTVYYRDGRPAFRdRGDRLTVTSSDDPEAIRAALRLAQAK-WGSIRVTGSEEFKRRAWRAAAERGLEVTFEDPDLEALR 88


                  ..
gi 970319603  299 RE 300
Cdd:pfam18821  89 QA 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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