NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|923032550|ref|WP_053426525|]
View 

sporulation protein YqfC [Rossellomorea marisflavi]

Protein Classification

YabP/YqfC family sporulation protein( domain architecture ID 10021546)

YabP/YqfC family sporulation protein is involved in spore coat assembly during the process of sporulation

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
YqfC COG5871
Spore cortex protein YqfC, YabP family [Cell cycle control, cell division, chromosome ...
 3-94 2.46e-39

Spore cortex protein YqfC, YabP family [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444573  Cd Length: 93  Bit Score: 125.66  E-value: 2.46e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 923032550  3 KNWLQEMRKWMTEKMDLPEDVMMDLPRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILL 82
Cdd:COG5871   2 KKRKKKLKKWLAELLDLPKDVVLDLPRITMIGNLQLYIENHRGIVEYSPEEVRINTTEGELIITGKDLVIKTILPEEILI 81

                        90
                ....*....|..
gi 923032550 83 QGKVVEVIYLDE 94
Cdd:COG5871  82 EGRITSIEFLEG 93
 
Name Accession Description Interval E-value
YqfC COG5871
Spore cortex protein YqfC, YabP family [Cell cycle control, cell division, chromosome ...
 3-94 2.46e-39

Spore cortex protein YqfC, YabP family [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444573  Cd Length: 93  Bit Score: 125.66  E-value: 2.46e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 923032550  3 KNWLQEMRKWMTEKMDLPEDVMMDLPRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILL 82
Cdd:COG5871   2 KKRKKKLKKWLAELLDLPKDVVLDLPRITMIGNLQLYIENHRGIVEYSPEEVRINTTEGELIITGKDLVIKTILPEEILI 81

                        90
                ....*....|..
gi 923032550 83 QGKVVEVIYLDE 94
Cdd:COG5871  82 EGRITSIEFLEG 93
spore_yqfC TIGR02856
sporulation protein YqfC; This small protein, designated YqfC in Bacillus subtilis, is both ...
 9-93 2.64e-34

sporulation protein YqfC; This small protein, designated YqfC in Bacillus subtilis, is both restricted to and universal in sporulating species of the Firmcutes, such as Bacillus subtilis and Clostridium perfringens. It is part of the sigma(E)-controlled regulon, and its mutation leads to a sporulation defect. [Cellular processes, Sporulation and germination]


Pssm-ID: 131903  Cd Length: 85  Bit Score: 112.78  E-value: 2.64e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 923032550   9 MRKWMTEKMDLPEDVMMDLPRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILLQGKVVE 88
Cdd:TIGR02856  1 MKEWLAEKLDLPGDIILDLPRITLIGNEHIYIENHRGLVVFSPEEVKLNSTNGKITIEGKNFVIKFILPEEILLEGKIKS 80


                 ....*
gi 923032550  89 VIYLD 93
Cdd:TIGR02856 81 VRYEE 85
YabP pfam07873
YabP family; This family of proteins is involved in spore coat assembly during the process of ...
 28-91 9.96e-17

YabP family; This family of proteins is involved in spore coat assembly during the process of sporulation.


Pssm-ID: 462297  Cd Length: 64  Bit Score: 67.39  E-value: 9.96e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 923032550  28 PRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILLQGKVVEVIY 91
Cdd:pfam07873  1 HKITLTGRRELTIEGVKGVLSFDEEEIRLETKLGILTIKGENLHIKYLTKGELKIEGKIDSLEY 64
 
Name Accession Description Interval E-value
YqfC COG5871
Spore cortex protein YqfC, YabP family [Cell cycle control, cell division, chromosome ...
 3-94 2.46e-39

Spore cortex protein YqfC, YabP family [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444573  Cd Length: 93  Bit Score: 125.66  E-value: 2.46e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 923032550  3 KNWLQEMRKWMTEKMDLPEDVMMDLPRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILL 82
Cdd:COG5871   2 KKRKKKLKKWLAELLDLPKDVVLDLPRITMIGNLQLYIENHRGIVEYSPEEVRINTTEGELIITGKDLVIKTILPEEILI 81

                        90
                ....*....|..
gi 923032550 83 QGKVVEVIYLDE 94
Cdd:COG5871  82 EGRITSIEFLEG 93
spore_yqfC TIGR02856
sporulation protein YqfC; This small protein, designated YqfC in Bacillus subtilis, is both ...
 9-93 2.64e-34

sporulation protein YqfC; This small protein, designated YqfC in Bacillus subtilis, is both restricted to and universal in sporulating species of the Firmcutes, such as Bacillus subtilis and Clostridium perfringens. It is part of the sigma(E)-controlled regulon, and its mutation leads to a sporulation defect. [Cellular processes, Sporulation and germination]


Pssm-ID: 131903  Cd Length: 85  Bit Score: 112.78  E-value: 2.64e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 923032550   9 MRKWMTEKMDLPEDVMMDLPRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILLQGKVVE 88
Cdd:TIGR02856  1 MKEWLAEKLDLPGDIILDLPRITLIGNEHIYIENHRGLVVFSPEEVKLNSTNGKITIEGKNFVIKFILPEEILLEGKIKS 80


                 ....*
gi 923032550  89 VIYLD 93
Cdd:TIGR02856 81 VRYEE 85
YabP pfam07873
YabP family; This family of proteins is involved in spore coat assembly during the process of ...
 28-91 9.96e-17

YabP family; This family of proteins is involved in spore coat assembly during the process of sporulation.


Pssm-ID: 462297  Cd Length: 64  Bit Score: 67.39  E-value: 9.96e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 923032550  28 PRITMIGQIHIYIENHRGLLTFADDEVRLLLKQGQLLIKGEQFVIKIILPEEILLQGKVVEVIY 91
Cdd:pfam07873  1 HKITLTGRRELTIEGVKGVLSFDEEEIRLETKLGILTIKGENLHIKYLTKGELKIEGKIDSLEY 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH