|
Name |
Accession |
Description |
Interval |
E-value |
| SdrH_fam_CTERM |
NF039170 |
SdrH family protein C-terminal domain; The founding member of this family of staphylococcal ... |
454-612 |
4.54e-76 |
|
SdrH family protein C-terminal domain; The founding member of this family of staphylococcal proteins, SdrH from Staphylococcus epidermidis, is one of three MSCRAMM family proteins, but is atypical in lacking a recognizable LPXTG-like C-terminal recognition sequence for cell wall anchoring. This HMM represents the entire region C-terminal to the repetitive, low-complexity region that is a feature of all members of this family. That repetitive region consists mostly of Ser-Asp dipeptides in S. epidermidis but has radically different compositions in other species.
Pssm-ID: 468504 Cd Length: 163 Bit Score: 239.44 E-value: 4.54e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 454 NRLNDLANGSYKYNPYIINQVNRLGNNNEYISNQDFYRLFRKQSF-NNQYLDYLQKGSNYFRFEYFNPLNSKKYYKNLDE 532
Cdd:NF039170 1 NRFNQLATGSFKYNPFVINQVNRLSEDDGNVSDQDIYNLLRKQNFsDNSYLNSLQQSTNYFRFQYFNPLNADQYYKNLDK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 533 QVLALITGEIGSMPDLKKPSDRDKEEEADIQSHDEDKIIDSKEESKEAENN--DKYKNINIALITSIIVIFVGVTGRFIY 610
Cdd:NF039170 81 QVLALITGEIGSMPDLKKPKDKDKKSKGQYEKHKKDEQEGTKTEKKNMKTDtkLKFSRTLITLIGAIIVIFIGVIILYLY 160
|
..
gi 920628746 611 RK 612
Cdd:NF039170 161 KR 162
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
41-315 |
2.06e-11 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 67.24 E-value: 2.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 41 NAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTD---NSQPEND 117
Cdd:NF033609 612 SASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsdsDSDSDSD 691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 118 DDNDTEENSSKPGNSHPGNQEGeiNPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEG 197
Cdd:NF033609 692 SDSDSDSDSDSDSDSDSDSDSD--SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 769
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 198 QPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKP 277
Cdd:NF033609 770 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 849
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 920628746 278 GASGTDKPDEGNKPGESG--NPQQPPNHDGNTHSGSNQGE 315
Cdd:NF033609 850 SDSDSDSESDSNSDSESGsnNNVVPPNSPKNGTNASNKNE 889
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
116-316 |
2.31e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 66.15 E-value: 2.31e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 116 NDDDNDTEENSSKPGNSHpgNQEGEINPENQDvdkpnEEHKAGENETDKPDEGSNSDESDTAHPGDKdqsGENNSGNQEG 195
Cdd:PHA03169 49 PAPTTSGPQVRAVAEQGH--RQTESDTETAEE-----SRHGEKEERGQGGPSGSGSESVGSPTPSPS---GSAEELASGL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 196 EGQPGDSDTDKPDEGNKPGEGESNQPGDQEtdkPGDEDKPGASGKDQPGEGskpgndDSGQHNGGSKPGNQGTDKP---S 272
Cdd:PHA03169 119 SPENTSGSSPESPASHSPPPSPPSHPGPHE---PAPPESHNPSPNQQPSSF------LQPSHEDSPEEPEPPTSEPepdS 189
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 920628746 273 EGHKPGASGTDKPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEH 316
Cdd:PHA03169 190 PGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEH 233
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
45-323 |
1.20e-10 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 64.55 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 45 TDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTD-NSQPENDDDNDTE 123
Cdd:NF033609 592 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSD 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 124 ENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSD 203
Cdd:NF033609 672 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 204 TDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTD 283
Cdd:NF033609 752 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 831
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 920628746 284 KPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEHNTGSGQN 323
Cdd:NF033609 832 SDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNN 871
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
61-377 |
2.04e-09 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 60.69 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 61 DNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTD-NSQPENDDDNDTEENSSKPGNSHPGNQEG 139
Cdd:NF033609 572 DSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDsDSASDSDSASDSDSASDSDSDSDSDSDSD 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 140 EINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESN 219
Cdd:NF033609 652 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 220 QPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTDKPDEGNKPGESG-NPQ 298
Cdd:NF033609 732 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDSD 811
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 920628746 299 QPPNHDGNTHSGSNQGEHNTGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDEHSGhSDPNDMTNHNPQENNHGTNQGQ 377
Cdd:NF033609 812 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESG-SNNNVVPPNSPKNGTNASNKNE 889
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
35-327 |
4.53e-09 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 59.54 E-value: 4.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 35 TDEVNQNAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTDnSQP 114
Cdd:NF033609 576 SDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSD-SDS 654
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 115 ENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQE 194
Cdd:NF033609 655 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 195 GEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEG 274
Cdd:NF033609 735 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 814
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 920628746 275 HKPGASGTDKPDEGNKPGESGNPQQPPN---HDGNTHSGSNQGEHNTGSGQNGSNN 327
Cdd:NF033609 815 DSDSDSDSDSDSDSDSDSDSDSDSDSDSdsdSDSDSDSDSDSESDSNSDSESGSNN 870
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
143-351 |
2.93e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 56.93 E-value: 2.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 143 PENQDVDKPNEEHKAGENETDKPDEGsnsdESDTAHPGDKDQSGENNSgnqEGEgQPGDSDTDKPDEGNKPGEGESNQpG 222
Cdd:TIGR00927 638 AEHTGERTGEEGERPTEAEGENGEES----GGEAEQEGETETKGENES---EGE-IPAERKGEQEGEGEIEAKEADHK-G 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 223 DQETDKPGDEDKPGASGKDQPGEGSKPGnddsgqhnGGSKPGNQGTDKPSEGHKPGASGTDkpDEGNKPGESGNPQQPPN 302
Cdd:TIGR00927 709 ETEAEEVEHEGETEAEGTEDEGEIETGE--------EGEEVEDEGEGEAEGKHEVETEGDR--KETEHEGETEAEGKEDE 778
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 920628746 303 HDGNTHSGSNqGEHNTGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDE 351
Cdd:TIGR00927 779 DEGEIQAGED-GEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDT 826
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
29-329 |
1.42e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.92 E-value: 1.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 29 DKNQPATDEVNQNAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNS 108
Cdd:NF033609 560 DSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASD 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 109 TDnSQPENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGEN 188
Cdd:NF033609 640 SD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 189 NSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGT 268
Cdd:NF033609 719 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 798
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 920628746 269 DKPSEGHKPGASGTDKPDEGNKPGESGNpqqppNHDGNTHSGSNQGEHNTGSGQNGSNNGS 329
Cdd:NF033609 799 DSDSDSDSDSDSDSDSDSDSDSDSDSDS-----DSDSDSDSDSDSDSDSDSDSDSDSDSDS 854
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
83-391 |
1.97e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.14 E-value: 1.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 83 GEMKPTTENND-----DTQLDHDNTMNHDNSTDNSQPENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKA 157
Cdd:NF033609 552 GEIEPIPEDSDsdpgsDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 631
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 158 GENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGA 237
Cdd:NF033609 632 SDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 238 SGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTDKPDEGNKPGESgNPQQPPNHDGNTHSGSNQGEHN 317
Cdd:NF033609 712 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDS 790
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 920628746 318 TGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDEHSGHSDPNDMTNHNPQENNHGTNQGQQPTWSHHDHNVSDS 391
Cdd:NF033609 791 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDS 864
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
168-330 |
6.11e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 45.76 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 168 GSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEdkpGASGKDQPGEGS 247
Cdd:cd21118 195 GNNQNSGCTNPPPSGSHESFSNSGGSSSSGSSGSQGSHGSNGQGSSGSSGGQGNGGNNGSSSSNS---GNSGGSNGGSSG 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 248 KPGNDDSGQHNGGSkpgNQGTDKPSEGHKPGASGTDKPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEHNTGSGQNGSNN 327
Cdd:cd21118 272 NSGSGSGGSSSGGS---NGWGGSSSSGGSGGSGGGNKPECNNPGNDVRMAGGGGSQGSKESSGSHGSNGGNGQAEAVGGL 348
|
...
gi 920628746 328 GSQ 330
Cdd:cd21118 349 NTL 351
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
158-249 |
1.23e-04 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 45.17 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 158 GENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEgnkpGEGESnQPGDQETDKPGDEDkpGA 237
Cdd:COG4547 208 AEELGEDEDEEDEDDEDDSGEQEEDEEDGEDEDEESDEGAEAEDAEASGDDA----EEGES-EAAEAESDEMAEEA--EG 280
|
90
....*....|..
gi 920628746 238 SGKDQPGEGSKP 249
Cdd:COG4547 281 EDSEEPGEPWRP 292
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
124-438 |
1.15e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 42.20 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 124 ENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSD 203
Cdd:NF033609 546 EQPDEPGEIEPIPEDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 204 TDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTD 283
Cdd:NF033609 626 SDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 705
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 284 KPDEGNKPGES---GNPQQPPNHDGNTHSGSNQGEHNTGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDEHSGHSDPND 360
Cdd:NF033609 706 SDSDSDSDSDSdsdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 785
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 920628746 361 MTNHNPQENNHGTNQGQQPTWSHHDHNVSDSMIHHIYPNKRQNQSEMNGSTTTNQWYYGGRLQHNHNQNDTEVYTNND 438
Cdd:NF033609 786 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSD 863
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
193-301 |
1.32e-03 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 40.02 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 193 QEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPgEGSKPGNDDSGQHNGGSKPGNQGTDKPS 272
Cdd:pfam15240 35 EEGQSQQGGQGPQGPPPGGFPPQPPASDDPPGPPPPGGPQQPPPQGGKQKP-QGPPPQGGPRPPPGKPQGPPPQGGNQQQ 113
|
90 100
....*....|....*....|....*....
gi 920628746 273 EGHKPGASGTDKPDEGNKPGESGNPQQPP 301
Cdd:pfam15240 114 GPPPPGKPQGPPPQGGGPPPQGGNQQGPP 142
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SdrH_fam_CTERM |
NF039170 |
SdrH family protein C-terminal domain; The founding member of this family of staphylococcal ... |
454-612 |
4.54e-76 |
|
SdrH family protein C-terminal domain; The founding member of this family of staphylococcal proteins, SdrH from Staphylococcus epidermidis, is one of three MSCRAMM family proteins, but is atypical in lacking a recognizable LPXTG-like C-terminal recognition sequence for cell wall anchoring. This HMM represents the entire region C-terminal to the repetitive, low-complexity region that is a feature of all members of this family. That repetitive region consists mostly of Ser-Asp dipeptides in S. epidermidis but has radically different compositions in other species.
Pssm-ID: 468504 Cd Length: 163 Bit Score: 239.44 E-value: 4.54e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 454 NRLNDLANGSYKYNPYIINQVNRLGNNNEYISNQDFYRLFRKQSF-NNQYLDYLQKGSNYFRFEYFNPLNSKKYYKNLDE 532
Cdd:NF039170 1 NRFNQLATGSFKYNPFVINQVNRLSEDDGNVSDQDIYNLLRKQNFsDNSYLNSLQQSTNYFRFQYFNPLNADQYYKNLDK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 533 QVLALITGEIGSMPDLKKPSDRDKEEEADIQSHDEDKIIDSKEESKEAENN--DKYKNINIALITSIIVIFVGVTGRFIY 610
Cdd:NF039170 81 QVLALITGEIGSMPDLKKPKDKDKKSKGQYEKHKKDEQEGTKTEKKNMKTDtkLKFSRTLITLIGAIIVIFIGVIILYLY 160
|
..
gi 920628746 611 RK 612
Cdd:NF039170 161 KR 162
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
41-315 |
2.06e-11 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 67.24 E-value: 2.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 41 NAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTD---NSQPEND 117
Cdd:NF033609 612 SASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsdsDSDSDSD 691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 118 DDNDTEENSSKPGNSHPGNQEGeiNPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEG 197
Cdd:NF033609 692 SDSDSDSDSDSDSDSDSDSDSD--SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 769
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 198 QPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKP 277
Cdd:NF033609 770 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 849
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 920628746 278 GASGTDKPDEGNKPGESG--NPQQPPNHDGNTHSGSNQGE 315
Cdd:NF033609 850 SDSDSDSESDSNSDSESGsnNNVVPPNSPKNGTNASNKNE 889
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
116-316 |
2.31e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 66.15 E-value: 2.31e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 116 NDDDNDTEENSSKPGNSHpgNQEGEINPENQDvdkpnEEHKAGENETDKPDEGSNSDESDTAHPGDKdqsGENNSGNQEG 195
Cdd:PHA03169 49 PAPTTSGPQVRAVAEQGH--RQTESDTETAEE-----SRHGEKEERGQGGPSGSGSESVGSPTPSPS---GSAEELASGL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 196 EGQPGDSDTDKPDEGNKPGEGESNQPGDQEtdkPGDEDKPGASGKDQPGEGskpgndDSGQHNGGSKPGNQGTDKP---S 272
Cdd:PHA03169 119 SPENTSGSSPESPASHSPPPSPPSHPGPHE---PAPPESHNPSPNQQPSSF------LQPSHEDSPEEPEPPTSEPepdS 189
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 920628746 273 EGHKPGASGTDKPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEH 316
Cdd:PHA03169 190 PGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEH 233
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
45-323 |
1.20e-10 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 64.55 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 45 TDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTD-NSQPENDDDNDTE 123
Cdd:NF033609 592 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSD 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 124 ENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSD 203
Cdd:NF033609 672 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 204 TDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTD 283
Cdd:NF033609 752 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 831
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 920628746 284 KPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEHNTGSGQN 323
Cdd:NF033609 832 SDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNN 871
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
86-301 |
1.88e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 63.07 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 86 KPTTENNDDTQLDHDNTMNHDNSTDNSQPENDDDNDTEENSSKPGNSHPGNQEGEinpenqdvdkpNEEHKAGENETDKP 165
Cdd:PHA03169 47 APPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVG-----------SPTPSPSGSAEELA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 166 DEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKP--GEGESNQPGDQETDKPGDEDKPGASGkdqP 243
Cdd:PHA03169 116 SGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPssFLQPSHEDSPEEPEPPTSEPEPDSPG---P 192
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 920628746 244 GEGSKPGNDDSGQhNGGSKPGNQGTDKPSEGHKP-GASGTDKPDEGNKPGESGNPQQPP 301
Cdd:PHA03169 193 PQSETPTSSPPPQ-SPPDEPGEPQSPTPQQAPSPnTQQAVEHEDEPTEPEREGPPFPGH 250
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
61-377 |
2.04e-09 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 60.69 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 61 DNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTD-NSQPENDDDNDTEENSSKPGNSHPGNQEG 139
Cdd:NF033609 572 DSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDsDSASDSDSASDSDSASDSDSDSDSDSDSD 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 140 EINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESN 219
Cdd:NF033609 652 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 220 QPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTDKPDEGNKPGESG-NPQ 298
Cdd:NF033609 732 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDSD 811
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 920628746 299 QPPNHDGNTHSGSNQGEHNTGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDEHSGhSDPNDMTNHNPQENNHGTNQGQ 377
Cdd:NF033609 812 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESG-SNNNVVPPNSPKNGTNASNKNE 889
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
35-327 |
4.53e-09 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 59.54 E-value: 4.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 35 TDEVNQNAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTDnSQP 114
Cdd:NF033609 576 SDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSD-SDS 654
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 115 ENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQE 194
Cdd:NF033609 655 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 195 GEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEG 274
Cdd:NF033609 735 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 814
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 920628746 275 HKPGASGTDKPDEGNKPGESGNPQQPPN---HDGNTHSGSNQGEHNTGSGQNGSNN 327
Cdd:NF033609 815 DSDSDSDSDSDSDSDSDSDSDSDSDSDSdsdSDSDSDSDSDSESDSNSDSESGSNN 870
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
143-351 |
2.93e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 56.93 E-value: 2.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 143 PENQDVDKPNEEHKAGENETDKPDEGsnsdESDTAHPGDKDQSGENNSgnqEGEgQPGDSDTDKPDEGNKPGEGESNQpG 222
Cdd:TIGR00927 638 AEHTGERTGEEGERPTEAEGENGEES----GGEAEQEGETETKGENES---EGE-IPAERKGEQEGEGEIEAKEADHK-G 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 223 DQETDKPGDEDKPGASGKDQPGEGSKPGnddsgqhnGGSKPGNQGTDKPSEGHKPGASGTDkpDEGNKPGESGNPQQPPN 302
Cdd:TIGR00927 709 ETEAEEVEHEGETEAEGTEDEGEIETGE--------EGEEVEDEGEGEAEGKHEVETEGDR--KETEHEGETEAEGKEDE 778
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 920628746 303 HDGNTHSGSNqGEHNTGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDE 351
Cdd:TIGR00927 779 DEGEIQAGED-GEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDT 826
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
77-351 |
1.31e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 55.00 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 77 SDSQNHGEMKPttenNDDTQLDHDNTMNHDNSTDNSQPENDDDNDTEENSskpgnshpgnqEGEINPENQDvdkpnEEHK 156
Cdd:TIGR00927 636 AEAEHTGERTG----EEGERPTEAEGENGEESGGEAEQEGETETKGENES-----------EGEIPAERKG-----EQEG 695
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 157 AGENETDKPDEGSNSDESDTAHPGDKDQSGENNsgnqEGEGQPGDSDTDKPDEGNkpGEGESNQPGDQETDKPGDEDKPG 236
Cdd:TIGR00927 696 EGEIEAKEADHKGETEAEEVEHEGETEAEGTED----EGEIETGEEGEEVEDEGE--GEAEGKHEVETEGDRKETEHEGE 769
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 237 ASGKDQPGEGSkpGNDDSGQhnGGSKPGNQGTDKPSEGHKPGASGTDKPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEH 316
Cdd:TIGR00927 770 TEAEGKEDEDE--GEIQAGE--DGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEA 845
|
250 260 270
....*....|....*....|....*....|....*....
gi 920628746 317 NTGS----GQNGSNNGSQNHSNGSSNNHNLNNHGKHQDE 351
Cdd:TIGR00927 846 KQDEkgvdGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEE 884
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
29-329 |
1.42e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.92 E-value: 1.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 29 DKNQPATDEVNQNAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNS 108
Cdd:NF033609 560 DSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASD 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 109 TDnSQPENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGEN 188
Cdd:NF033609 640 SD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 189 NSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGT 268
Cdd:NF033609 719 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 798
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 920628746 269 DKPSEGHKPGASGTDKPDEGNKPGESGNpqqppNHDGNTHSGSNQGEHNTGSGQNGSNNGS 329
Cdd:NF033609 799 DSDSDSDSDSDSDSDSDSDSDSDSDSDS-----DSDSDSDSDSDSDSDSDSDSDSDSDSDS 854
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
83-391 |
1.97e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.14 E-value: 1.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 83 GEMKPTTENND-----DTQLDHDNTMNHDNSTDNSQPENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKA 157
Cdd:NF033609 552 GEIEPIPEDSDsdpgsDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 631
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 158 GENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGA 237
Cdd:NF033609 632 SDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 238 SGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTDKPDEGNKPGESgNPQQPPNHDGNTHSGSNQGEHN 317
Cdd:NF033609 712 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDS 790
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 920628746 318 TGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDEHSGHSDPNDMTNHNPQENNHGTNQGQQPTWSHHDHNVSDS 391
Cdd:NF033609 791 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDS 864
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
153-325 |
1.74e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 50.74 E-value: 1.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 153 EEHKAGENETDKPDEGSNSDESDTAHPGDkdqSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQetdkpGDE 232
Cdd:PHA03169 64 QGHRQTESDTETAEESRHGEKEERGQGGP---SGSGSESVGSPTPSPSGSAEELASGLSPENTSGSSPESPA-----SHS 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 233 DKPGASGKDQPGEGSKPGNDD-SGQHNGGSKPGNQGTDKPSEGHKPGASGTDK---PDEGNKPGESGNPQQPPNHDGNTH 308
Cdd:PHA03169 136 PPPSPPSHPGPHEPAPPESHNpSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDspgPPQSETPTSSPPPQSPPDEPGEPQ 215
|
170
....*....|....*..
gi 920628746 309 SGSNQGEHNTGSGQNGS 325
Cdd:PHA03169 216 SPTPQQAPSPNTQQAVE 232
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
5-252 |
8.64e-06 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 48.63 E-value: 8.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 5 LAQTSLILALSTSVIGH-------------EHEVKAADKNQPATDEVN------QNAVTTDTRTQNDLSNQNDYYDNHQS 65
Cdd:PRK08581 10 LLSTTLVLPTLTSPTAYaddpqkdstakttSHDSKKSNDDETSKDTSSkdtdkaDNNNTSNQDNNDKKFSTIDSSTSDSN 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 66 DTQDTAVSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHD-NSTDNSQPENDDDNDTEENS-SKPGNSHPGNQEGEINP 143
Cdd:PRK08581 90 NIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNsDISDYEQPRNSEKSTNDSNKnSDSSIKNDTDTQSSKQD 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 144 ENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQ---PGDSDTDKPDEGNKPGEGESNQ 220
Cdd:PRK08581 170 KADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSKDNQSMsdsALDSILDQYSEDAKKTQKDYAS 249
|
250 260 270
....*....|....*....|....*....|..
gi 920628746 221 PGDQETDKPGDEDKPGASGKDQPGEGSKPGND 252
Cdd:PRK08581 250 QSKKDKTETSNTKNPQLPTQDELKHKSKPAQS 281
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
201-300 |
1.69e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 48.15 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 201 DSDTDKPDEGNKpGEGESNQPGDQETDKPGDEDKPGAS-GKDQPGEGSKPGNDDSGQhnGGSKPGnqgtdkPSEGHKPGA 279
Cdd:PTZ00449 501 EEDSDKHDEPPE-GPEASGLPPKAPGDKEGEEGEHEDSkESDEPKEGGKPGETKEGE--VGKKPG------PAKEHKPSK 571
|
90 100
....*....|....*....|...
gi 920628746 280 --SGTDKPDEGNKPGESGNPQQP 300
Cdd:PTZ00449 572 ipTLSKKPEFPKDPKHPKDPEEP 594
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
26-266 |
2.18e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 47.27 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 26 KAADKNQPATDEVNQNAVTTDTRTQNDLSNQNDYYDNHQSDTQDTAVSEKNSDSQNHGEmkPTTENNDDTQLDhdntmnh 105
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGS--PTPSPSGSAEEL------- 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 106 dnsTDNSQPENDDDNDTEENSSKPGNSHPGNQEGEINPENqdvdkPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQS 185
Cdd:PHA03169 115 ---ASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAP-----PESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 186 GENNSGNQEGEGQPGDSDTDKPDEGNKPGEgesnqPGDQETDKPGDEDkpGASGKDQPGEGSKPGNDDSGQHN-----GG 260
Cdd:PHA03169 187 PDSPGPPQSETPTSSPPPQSPPDEPGEPQS-----PTPQQAPSPNTQQ--AVEHEDEPTEPEREGPPFPGHRShsytvVG 259
|
....*.
gi 920628746 261 SKPGNQ 266
Cdd:PHA03169 260 WKPSTR 265
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
168-330 |
6.11e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 45.76 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 168 GSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEdkpGASGKDQPGEGS 247
Cdd:cd21118 195 GNNQNSGCTNPPPSGSHESFSNSGGSSSSGSSGSQGSHGSNGQGSSGSSGGQGNGGNNGSSSSNS---GNSGGSNGGSSG 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 248 KPGNDDSGQHNGGSkpgNQGTDKPSEGHKPGASGTDKPDEGNKPGESGNPQQPPNHDGNTHSGSNQGEHNTGSGQNGSNN 327
Cdd:cd21118 272 NSGSGSGGSSSGGS---NGWGGSSSSGGSGGSGGGNKPECNNPGNDVRMAGGGGSQGSKESSGSHGSNGGNGQAEAVGGL 348
|
...
gi 920628746 328 GSQ 330
Cdd:cd21118 349 NTL 351
|
|
| PRK09418 |
PRK09418 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
107-247 |
6.58e-05 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 236504 [Multi-domain] Cd Length: 780 Bit Score: 46.24 E-value: 6.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 107 NSTDNSQPendddnDTEENSSKPGN-SHPGNQEGEINPENQDVDKPNEEHK--AGENETDKPDEGSNSDESDTAHPGDKD 183
Cdd:PRK09418 616 NTTFDSSP------NAQKYIKKDGNiSYVGPSENEFAKYAIDITKKNDDDKetGGENPTTPPTGEGDNGENPTTPPTGEG 689
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 920628746 184 QSGENNSGNQEGEGQPGDSDT-DKPDEGNKPGEGESNQpgDQETDKPGDEDKPGASGKDQPGEGS 247
Cdd:PRK09418 690 NNGENPTTPPTGEGNNGGNPTtPSTDEGNNAGSGQTTT--DNQNSKETTTVSENKEERDLPKTGT 752
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
157-300 |
1.11e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.97 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 157 AGENETDKPDEGSnSDESDTAHPGDKDQSGENNS--GNQEGEGQPGDSDTDKPDegnkpgeGESNQPGDQETDKPGDEDK 234
Cdd:PRK13108 318 VGPGEPNQPDDVA-EAVKAEVAEVTDEVAAESVVqvADRDGESTPAVEETSEAD-------IEREQPGDLAGQAPAAHQV 389
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 920628746 235 PGASGKDQPGEgskPGNDDSGQHNGgskpgnqgtDKPSEGHK-PGASGTDKPDEGNKPGESGNPQQP 300
Cdd:PRK13108 390 DAEAASAAPEE---PAALASEAHDE---------TEPEVPEKaAPIPDPAKPDELAVAGPGDDPAEP 444
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
158-249 |
1.23e-04 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 45.17 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 158 GENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSDTDKPDEgnkpGEGESnQPGDQETDKPGDEDkpGA 237
Cdd:COG4547 208 AEELGEDEDEEDEDDEDDSGEQEEDEEDGEDEDEESDEGAEAEDAEASGDDA----EEGES-EAAEAESDEMAEEA--EG 280
|
90
....*....|..
gi 920628746 238 SGKDQPGEGSKP 249
Cdd:COG4547 281 EDSEEPGEPWRP 292
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
106-230 |
3.61e-04 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 43.63 E-value: 3.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 106 DNSTDNSQPENDDDNDTEENSskpgnshpGNQEgeinpenqdvdkpnEEHKAGENETDKPDEGSNSDESDTAhpGDKDQS 185
Cdd:COG4547 206 DLAEELGEDEDEEDEDDEDDS--------GEQE--------------EDEEDGEDEDEESDEGAEAEDAEAS--GDDAEE 261
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 920628746 186 GENNSGNQEGEGQPGDSDTDKPDEGNKPgeGESNQPGDQETDKPG 230
Cdd:COG4547 262 GESEAAEAESDEMAEEAEGEDSEEPGEP--WRPNAPPPDDPADPD 304
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
124-438 |
1.15e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 42.20 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 124 ENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGEGQPGDSD 203
Cdd:NF033609 546 EQPDEPGEIEPIPEDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 204 TDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPGEGSKPGNDDSGQHNGGSKPGNQGTDKPSEGHKPGASGTD 283
Cdd:NF033609 626 SDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 705
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 284 KPDEGNKPGES---GNPQQPPNHDGNTHSGSNQGEHNTGSGQNGSNNGSQNHSNGSSNNHNLNNHGKHQDEHSGHSDPND 360
Cdd:NF033609 706 SDSDSDSDSDSdsdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 785
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 920628746 361 MTNHNPQENNHGTNQGQQPTWSHHDHNVSDSMIHHIYPNKRQNQSEMNGSTTTNQWYYGGRLQHNHNQNDTEVYTNND 438
Cdd:NF033609 786 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSD 863
|
|
| PTZ00482 |
PTZ00482 |
membrane-attack complex/perforin (MACPF) Superfamily; Provisional |
72-242 |
1.22e-03 |
|
membrane-attack complex/perforin (MACPF) Superfamily; Provisional
Pssm-ID: 240433 [Multi-domain] Cd Length: 844 Bit Score: 42.16 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 72 VSEKNSDSQNHGEMKPTTENNDDTQLDHDNTMNHDNSTDNSQPEN--DDDNDTEENSSKPGNSHPGNQEgEINPENQDVd 149
Cdd:PTZ00482 69 ILCNQKKHASFLNQRKSLDDDDDDEFDFLYEDDEDDAGNATSGESstDDDSLLELPDRDEDADTQANND-QTNDFDQDD- 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 150 kpneehkAGENETDKPDEGSNSDESDTAHPGDKDQSGENNSGNQEGegqpgdSDTDKPDEGNKPGEGESNQPGD-QETDK 228
Cdd:PTZ00482 147 -------SSNSQTDQGLKQSVNLSSAEKLIEEKKGQTENTFKFYNF------GNDGEEAAAKDGGKSKSSDPGPlNDSDG 213
|
170
....*....|....
gi 920628746 229 PGDEDKPGASGKDQ 242
Cdd:PTZ00482 214 QGDDGDPESAEEDK 227
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
193-301 |
1.32e-03 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 40.02 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 193 QEGEGQPGDSDTDKPDEGNKPGEGESNQPGDQETDKPGDEDKPGASGKDQPgEGSKPGNDDSGQHNGGSKPGNQGTDKPS 272
Cdd:pfam15240 35 EEGQSQQGGQGPQGPPPGGFPPQPPASDDPPGPPPPGGPQQPPPQGGKQKP-QGPPPQGGPRPPPGKPQGPPPQGGNQQQ 113
|
90 100
....*....|....*....|....*....
gi 920628746 273 EGHKPGASGTDKPDEGNKPGESGNPQQPP 301
Cdd:pfam15240 114 GPPPPGKPQGPPPQGGGPPPQGGNQQGPP 142
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
25-219 |
9.38e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 39.00 E-value: 9.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 25 VKAADKNQPATDEVNQNAVTTDTRTQNDLSNQNDYYDNHQSDTQDTavSEKNSDSQNHGEMKPTTENNDDTQLDHDNTmN 104
Cdd:PRK08581 99 LPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEK--STNDSNKNSDSSIKNDTDTQSSKQDKADNQ-K 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 920628746 105 HDNSTDNSQPENDDDNDTEENSSKPGNSHPGNQEGEINPENQDVDKPNEEHKAGENETDKPDEGSNSDESDTAHPGDKDQ 184
Cdd:PRK08581 176 APSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDK 255
|
170 180 190
....*....|....*....|....*....|....*
gi 920628746 185 SGENNSGNQEGEGQPGDSDTDKPDEGNKPGEGESN 219
Cdd:PRK08581 256 TETSNTKNPQLPTQDELKHKSKPAQSFENDVNQSN 290
|
|
| |
