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Conserved domains on  [gi|851903931|ref|WP_048212799|]
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MULTISPECIES: DUF2955 domain-containing protein [Citrobacter]

Protein Classification

DUF2955 domain-containing protein( domain architecture ID 10567697)

DUF2955 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2955 pfam11168
Protein of unknown function (DUF2955); Some members in this family of proteins with unknown ...
 25-163 2.09e-21

Protein of unknown function (DUF2955); Some members in this family of proteins with unknown function annotate the proteins as membrane protein. However, this cannot be confirmed.


:

Pssm-ID: 431697  Cd Length: 140  Bit Score: 88.85  E-value: 2.09e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 851903931   25 QTLRISVAGTIALSISTFYNVQYGVFFVVYPLMLLSLVPVFNRHVAKQFVFSAAVNCVEMVLIVGYLSQWPLIMTLVVFG 104
Cdd:pfam11168   1 RALRIAFGCTLGLAVSKLFGWPYGMFAPVFPVLLLGLVPPLNLHALRQLLLSVVVTAGTVLLLVGLLQHHPLLMTLIVGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 851903931  105 LYVVRFRLMSKGPLFLFGSMGVVCQSTMLNFMSYPTTNWHTLMFSNMEACVMAVALSAL 163
Cdd:pfam11168  81 LLFYKFRAMLRGPKFLFGTMLVLGLSILLHFASYPTTDAVDLILGLAVAGLLAVVIAAL 139
 
Name Accession Description Interval E-value
DUF2955 pfam11168
Protein of unknown function (DUF2955); Some members in this family of proteins with unknown ...
 25-163 2.09e-21

Protein of unknown function (DUF2955); Some members in this family of proteins with unknown function annotate the proteins as membrane protein. However, this cannot be confirmed.


Pssm-ID: 431697  Cd Length: 140  Bit Score: 88.85  E-value: 2.09e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 851903931   25 QTLRISVAGTIALSISTFYNVQYGVFFVVYPLMLLSLVPVFNRHVAKQFVFSAAVNCVEMVLIVGYLSQWPLIMTLVVFG 104
Cdd:pfam11168   1 RALRIAFGCTLGLAVSKLFGWPYGMFAPVFPVLLLGLVPPLNLHALRQLLLSVVVTAGTVLLLVGLLQHHPLLMTLIVGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 851903931  105 LYVVRFRLMSKGPLFLFGSMGVVCQSTMLNFMSYPTTNWHTLMFSNMEACVMAVALSAL 163
Cdd:pfam11168  81 LLFYKFRAMLRGPKFLFGTMLVLGLSILLHFASYPTTDAVDLILGLAVAGLLAVVIAAL 139
 
Name Accession Description Interval E-value
DUF2955 pfam11168
Protein of unknown function (DUF2955); Some members in this family of proteins with unknown ...
 25-163 2.09e-21

Protein of unknown function (DUF2955); Some members in this family of proteins with unknown function annotate the proteins as membrane protein. However, this cannot be confirmed.


Pssm-ID: 431697  Cd Length: 140  Bit Score: 88.85  E-value: 2.09e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 851903931   25 QTLRISVAGTIALSISTFYNVQYGVFFVVYPLMLLSLVPVFNRHVAKQFVFSAAVNCVEMVLIVGYLSQWPLIMTLVVFG 104
Cdd:pfam11168   1 RALRIAFGCTLGLAVSKLFGWPYGMFAPVFPVLLLGLVPPLNLHALRQLLLSVVVTAGTVLLLVGLLQHHPLLMTLIVGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 851903931  105 LYVVRFRLMSKGPLFLFGSMGVVCQSTMLNFMSYPTTNWHTLMFSNMEACVMAVALSAL 163
Cdd:pfam11168  81 LLFYKFRAMLRGPKFLFGTMLVLGLSILLHFASYPTTDAVDLILGLAVAGLLAVVIAAL 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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