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Conserved domains on  [gi|786014762|ref|WP_045725263|]
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MULTISPECIES: spore protease YyaC [Clostridium]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YyaC COG5878
Uncharacterized sporulation protein YyaC,contains DUF1256 domain [Cell cycle control, cell ...
4-184 5.88e-82

Uncharacterized sporulation protein YyaC,contains DUF1256 domain [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444580  Cd Length: 195  Bit Score: 241.27  E-value: 5.88e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   4 SFSIDGIEYDSFNDIGNYIYKILKPiVDVNRTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQ 83
Cdd:COG5878    9 KLRIHYDDPNAVEKLSEALLSLLPK-LSSNREIVILCIGTDRSTGDSLGPLVGTLLKEKNIPPLHVYGTLEEPVHALNLK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762  84 DTIDKIYNNFNDPYIIAIDASLGSFNNIGKIFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVN 163
Cdd:COG5878   88 ETLEKIKKKHPNPFIIAIDACLGRLENVGYITIGNGPLKPGAGVNKDLPPVGDISITGIVNVGGFMEYFVLQNTRLSLVM 167
                        170       180
                 ....*....|....*....|.
gi 786014762 164 ALAETIAKGISYSIDKLSDND 184
Cdd:COG5878  168 KMADIIARGLVLALHRLSKKK 188
 
Name Accession Description Interval E-value
YyaC COG5878
Uncharacterized sporulation protein YyaC,contains DUF1256 domain [Cell cycle control, cell ...
4-184 5.88e-82

Uncharacterized sporulation protein YyaC,contains DUF1256 domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444580  Cd Length: 195  Bit Score: 241.27  E-value: 5.88e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   4 SFSIDGIEYDSFNDIGNYIYKILKPiVDVNRTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQ 83
Cdd:COG5878    9 KLRIHYDDPNAVEKLSEALLSLLPK-LSSNREIVILCIGTDRSTGDSLGPLVGTLLKEKNIPPLHVYGTLEEPVHALNLK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762  84 DTIDKIYNNFNDPYIIAIDASLGSFNNIGKIFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVN 163
Cdd:COG5878   88 ETLEKIKKKHPNPFIIAIDACLGRLENVGYITIGNGPLKPGAGVNKDLPPVGDISITGIVNVGGFMEYFVLQNTRLSLVM 167
                        170       180
                 ....*....|....*....|.
gi 786014762 164 ALAETIAKGISYSIDKLSDND 184
Cdd:COG5878  168 KMADIIARGLVLALHRLSKKK 188
spore_YyaC TIGR02841
putative sporulation protein YyaC; A comparative genome analysis of all sequenced genomes of ...
34-173 6.46e-73

putative sporulation protein YyaC; A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, also called YyaC, is a member of that panel and is otherwise uncharacterized. The second round of PSI-BLAST shows many similarities to the germination protease GPR, which is found in exactly the same set of organisms and has a known role in the sporulation/germination process. [Cellular processes, Sporulation and germination]


Pssm-ID: 131888  Cd Length: 140  Bit Score: 216.41  E-value: 6.46e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   34 RTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQDTIDKIYNNFNDPYIIAIDASLGSFNNIGK 113
Cdd:TIGR02841   1 REIVLLCIGTDRSTGDALGPLVGMKLKFLLLNNFHVFGTLEEPVHAKNLEEKLKIIKKKHPNPFIIAIDACLGRTKSVGH 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762  114 IFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVNALAETIAKGI 173
Cdd:TIGR02841  81 ITIGKGPLKPGAAVNKDLPPVGDLSITGIVNVSGFMEFMVLQNTRLSTVMKMADVISAGL 140
DUF1256 pfam06866
Protein of unknown function (DUF1256); This family consists of several uncharacterized ...
11-172 2.68e-62

Protein of unknown function (DUF1256); This family consists of several uncharacterized bacterial proteins which seem to be specific to the orders Clostridia and Bacillales. Family members are typically around 180 residues in length. The function of this family is unknown. These proteins are related to peptidase family M63 and so may be peptidases.


Pssm-ID: 115518  Cd Length: 164  Bit Score: 190.56  E-value: 2.68e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   11 EYDSFNDIGNYIYKILKPivdVNRTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQDTIDKIY 90
Cdd:pfam06866   6 DKNAYEELSNFLSSHIGK---VKREIVILCIGTDRSTGDSLGPLVGTLLKEKNIPNLNVYGTLEEPVHAVNLKEKLKEIK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   91 NNFNDPYIIAIDASLGSFNNIGKIFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVNALAETIA 170
Cdd:pfam06866  83 KKHKNPFIIAIDACLGASNNIGHIVIRNGPIKPGKGVGKSLPPVGDLSITGIVNSSGSMEYFVLQNTRLNTVMKMAKIIS 162

                  ..
gi 786014762  171 KG 172
Cdd:pfam06866 163 KG 164
 
Name Accession Description Interval E-value
YyaC COG5878
Uncharacterized sporulation protein YyaC,contains DUF1256 domain [Cell cycle control, cell ...
4-184 5.88e-82

Uncharacterized sporulation protein YyaC,contains DUF1256 domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444580  Cd Length: 195  Bit Score: 241.27  E-value: 5.88e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   4 SFSIDGIEYDSFNDIGNYIYKILKPiVDVNRTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQ 83
Cdd:COG5878    9 KLRIHYDDPNAVEKLSEALLSLLPK-LSSNREIVILCIGTDRSTGDSLGPLVGTLLKEKNIPPLHVYGTLEEPVHALNLK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762  84 DTIDKIYNNFNDPYIIAIDASLGSFNNIGKIFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVN 163
Cdd:COG5878   88 ETLEKIKKKHPNPFIIAIDACLGRLENVGYITIGNGPLKPGAGVNKDLPPVGDISITGIVNVGGFMEYFVLQNTRLSLVM 167
                        170       180
                 ....*....|....*....|.
gi 786014762 164 ALAETIAKGISYSIDKLSDND 184
Cdd:COG5878  168 KMADIIARGLVLALHRLSKKK 188
spore_YyaC TIGR02841
putative sporulation protein YyaC; A comparative genome analysis of all sequenced genomes of ...
34-173 6.46e-73

putative sporulation protein YyaC; A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, also called YyaC, is a member of that panel and is otherwise uncharacterized. The second round of PSI-BLAST shows many similarities to the germination protease GPR, which is found in exactly the same set of organisms and has a known role in the sporulation/germination process. [Cellular processes, Sporulation and germination]


Pssm-ID: 131888  Cd Length: 140  Bit Score: 216.41  E-value: 6.46e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   34 RTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQDTIDKIYNNFNDPYIIAIDASLGSFNNIGK 113
Cdd:TIGR02841   1 REIVLLCIGTDRSTGDALGPLVGMKLKFLLLNNFHVFGTLEEPVHAKNLEEKLKIIKKKHPNPFIIAIDACLGRTKSVGH 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762  114 IFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVNALAETIAKGI 173
Cdd:TIGR02841  81 ITIGKGPLKPGAAVNKDLPPVGDLSITGIVNVSGFMEFMVLQNTRLSTVMKMADVISAGL 140
DUF1256 pfam06866
Protein of unknown function (DUF1256); This family consists of several uncharacterized ...
11-172 2.68e-62

Protein of unknown function (DUF1256); This family consists of several uncharacterized bacterial proteins which seem to be specific to the orders Clostridia and Bacillales. Family members are typically around 180 residues in length. The function of this family is unknown. These proteins are related to peptidase family M63 and so may be peptidases.


Pssm-ID: 115518  Cd Length: 164  Bit Score: 190.56  E-value: 2.68e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   11 EYDSFNDIGNYIYKILKPivdVNRTVIFLCVGSDRCTGDSLGPLVGYHLKNIKKKNIYVYGSLEYPVHSQNLQDTIDKIY 90
Cdd:pfam06866   6 DKNAYEELSNFLSSHIGK---VKREIVILCIGTDRSTGDSLGPLVGTLLKEKNIPNLNVYGTLEEPVHAVNLKEKLKEIK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 786014762   91 NNFNDPYIIAIDASLGSFNNIGKIFIENKPLYPGLALDKDLPCVGDLSITGIVNVSGKFEFMVLQNTRLYTVNALAETIA 170
Cdd:pfam06866  83 KKHKNPFIIAIDACLGASNNIGHIVIRNGPIKPGKGVGKSLPPVGDLSITGIVNSSGSMEYFVLQNTRLNTVMKMAKIIS 162

                  ..
gi 786014762  171 KG 172
Cdd:pfam06866 163 KG 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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