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Conserved domains on  [gi|763313223|ref|WP_044171673|]
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pentapeptide repeat-containing protein [Oscillatoria sp. PCC 10802]

Protein Classification

pentapeptide repeat-containing protein( domain architecture ID 11442852)

pentapeptide repeat-containing protein (PRP) adopts a beta-helical structure and may have a targeting or structural function

CATH:  2.160.20.10
PubMed:  33925937|9655353

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
33-158 2.00e-31

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 111.57  E-value: 2.00e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  33 LETKECRMCNLSGAQLSGVNLSKADLRGSYLEGADLSGADLsgAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGAN 112
Cdd:COG1357   46 LTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGAD 123

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 763313223 113 LKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANL 158
Cdd:COG1357  124 LSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANL 169
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
33-158 2.00e-31

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 111.57  E-value: 2.00e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  33 LETKECRMCNLSGAQLSGVNLSKADLRGSYLEGADLSGADLsgAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGAN 112
Cdd:COG1357   46 LTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGAD 123

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 763313223 113 LKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANL 158
Cdd:COG1357  124 LSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANL 169
PRK15197 PRK15197
type III secretion system effector PipB;
48-165 7.93e-18

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 78.43  E-value: 7.93e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  48 LSGVNLSKADLRGSYLEGADLSGADLSGA-----ILIRTNLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRAF 122
Cdd:PRK15197 156 LRGVNLAHKDFQGEDLSDIDASNADFRETtlsnvNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAI 235

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 763313223 123 LLQANLSNADLNGASLFQSNLREA-NLNGANLTSANLNATILPD 165
Cdd:PRK15197 236 LFGSDLTDTKLNGAKLDKIALTLAkALTGADLTGSQHTPTPLPD 279
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 66-105 3.71e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 47.33  E-value: 3.71e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 763313223   66 ADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNG 105
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
33-158 2.00e-31

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 111.57  E-value: 2.00e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  33 LETKECRMCNLSGAQLSGVNLSKADLRGSYLEGADLSGADLsgAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGAN 112
Cdd:COG1357   46 LTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGAD 123

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 763313223 113 LKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANL 158
Cdd:COG1357  124 LSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANL 169
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
43-163 3.49e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 108.10  E-value: 3.49e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  43 LSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADL---ENSYLNGADLSGANLKNVRLD 119
Cdd:COG1357   31 LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANLanlSGANLSGANLSGANLRGANLS 110

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 763313223 120 RAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATIL 163
Cdd:COG1357  111 GANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADL 154
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
41-172 1.33e-29

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 106.95  E-value: 1.33e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  41 CNLSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLA---GADLENSYLNGADLSGANLKNVR 117
Cdd:COG1357   34 ANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANLAnlsGANLSGANLSGANLRGANLSGAN 113

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 763313223 118 LDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATILPDGKVSQPN 172
Cdd:COG1357  114 LSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGAN 168
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
41-163 1.09e-27

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 101.94  E-value: 1.09e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  41 CNLSGAQLSGVNLSKADLRGSYLEG---------ADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGA 111
Cdd:COG1357    5 ADLSGADLSGADLSGADLSGANLSGalsganlsgANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGA 84

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 763313223 112 NLknVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATIL 163
Cdd:COG1357   85 NL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADL 134
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
41-154 1.50e-23

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 91.16  E-value: 1.50e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  41 CNLSGAQLSGVNLSKADL---RGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGANLKNVR 117
Cdd:COG1357   69 ADLSGANLTGADLSGANLanlSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGAD 148

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 763313223 118 LDRAFLLQANLSNADLNGASLfqsnlreANLNGANLT 154
Cdd:COG1357  149 LSGADLSGANLSGANLSGANL-------ANLEGADLK 178
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
37-134 9.99e-22

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 86.53  E-value: 9.99e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  37 ECRMCNLSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGANLKNV 116
Cdd:COG1357   83 GANLANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGA 162

                         90
                 ....*....|....*...
gi 763313223 117 RLDRAFLlqANLSNADLN 134
Cdd:COG1357  163 NLSGANL--ANLEGADLK 178
PRK15197 PRK15197
type III secretion system effector PipB;
48-165 7.93e-18

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 78.43  E-value: 7.93e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  48 LSGVNLSKADLRGSYLEGADLSGADLSGA-----ILIRTNLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRAF 122
Cdd:PRK15197 156 LRGVNLAHKDFQGEDLSDIDASNADFRETtlsnvNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAI 235

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 763313223 123 LLQANLSNADLNGASLFQSNLREA-NLNGANLTSANLNATILPD 165
Cdd:PRK15197 236 LFGSDLTDTKLNGAKLDKIALTLAkALTGADLTGSQHTPTPLPD 279
PRK15196 PRK15196
type III secretion system effector PipB2;
42-174 1.79e-17

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 78.12  E-value: 1.79e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  42 NLSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADL------------- 108
Cdd:PRK15196 168 NLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLqhasllgcsmiec 247

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 763313223 109 --SGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATILPDGKVSQPNKK 174
Cdd:PRK15196 248 ncSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLN 315
PRK15196 PRK15196
type III secretion system effector PipB2;
11-165 2.54e-17

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 77.74  E-value: 2.54e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  11 LLTGISLTAPAAAQNDAHVKRL----LETKECRMCNLSGAQLSGVNLSKADLRGSYLE-----GADLSGADLSGAILIRT 81
Cdd:PRK15196 158 VLTGANLTAENLCDADLSGANLegavLFMADCEGANFKGANLSGTSLGDSNFKNACLEdsimcGATLDHANLTGANLQHA 237

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  82 NLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNAT 161
Cdd:PRK15196 238 SLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNT 317


                 ....
gi 763313223 162 ILPD 165
Cdd:PRK15196 318 CFKD 321
PRK15196 PRK15196
type III secretion system effector PipB2;
42-163 1.66e-16

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 75.43  E-value: 1.66e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  42 NLSGAQLSGVNLSKADLRGsylegADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRA 121
Cdd:PRK15196 153 NLKGAVLTGANLTAENLCD-----ADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHA 227

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 763313223 122 FLLQANLSNADLNGASLFQS-----NLREANLNGANLTSANLNATIL 163
Cdd:PRK15196 228 NLTGANLQHASLLGCSMIECncsgaNMDHTNLSGATLIRADMSGATL 274
PRK15196 PRK15196
type III secretion system effector PipB2;
43-172 1.06e-15

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 73.12  E-value: 1.06e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  43 LSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGA-----DLSGANLKNVR 117
Cdd:PRK15196 159 LTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGAtldhaNLTGANLQHAS 238

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 763313223 118 LDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATILPDGKVSQPN 172
Cdd:PRK15196 239 LLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRAN 293
PRK15196 PRK15196
type III secretion system effector PipB2;
38-121 6.38e-13

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 65.41  E-value: 6.38e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  38 CRM--CNLSGAQ-----LSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSG 110
Cdd:PRK15196 242 CSMieCNCSGANmdhtnLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKD 321

                         90
                 ....*....|.
gi 763313223 111 ANLKNVRLDRA 121
Cdd:PRK15196 322 CTLTHLRTEDA 332
PRK15197 PRK15197
type III secretion system effector PipB;
82-163 4.08e-12

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 62.64  E-value: 4.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  82 NLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNAT 161
Cdd:PRK15197 155 NLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAA 234


                 ..
gi 763313223 162 IL 163
Cdd:PRK15197 235 IL 236
PRK15196 PRK15196
type III secretion system effector PipB2;
40-157 1.61e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 61.18  E-value: 1.61e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  40 MC--NLSGAQLSGVNLSKADLRG-----SYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGAN 112
Cdd:PRK15196 219 MCgaTLDHANLTGANLQHASLLGcsmieCNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKAS 298

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 763313223 113 LKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSAN 157
Cdd:PRK15196 299 FISTNLDGADLAEANLNNTCFKDCTLTHLRTEDATMSTSTQTLFN 343
PRK15196 PRK15196
type III secretion system effector PipB2;
70-158 2.40e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 60.79  E-value: 2.40e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  70 GADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLN 149
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLT 230


                 ....*....
gi 763313223 150 GANLTSANL 158
Cdd:PRK15196 231 GANLQHASL 239
PRK15196 PRK15196
type III secretion system effector PipB2;
65-163 3.96e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 60.41  E-value: 3.96e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  65 GADLSGADLSGAILIRTNLRKANLSNTNLAG-----ADLENSYLNGADLSGA-----NLKNVRLDR-----AFLLQANLS 129
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGavlfmADCEGANFKGANLSGTslgdsNFKNACLEDsimcgATLDHANLT 230

                         90       100       110
                 ....*....|....*....|....*....|....
gi 763313223 130 NADLNGASLFQSNLREANLNGANLTSANLNATIL 163
Cdd:PRK15196 231 GANLQHASLLGCSMIECNCSGANMDHTNLSGATL 264
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
10-172 1.47e-10

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 58.92  E-value: 1.47e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  10 TLLTGISLTAPAAAQNDAHVKRL----LETKECRMCNLSGAQLSGVNLSKADLRGSYLEGADLsgadlsgailirtnLRK 85
Cdd:PRK15377 160 SLQATSSPSSPADWAKKLTDARLrqeaGEELTYADRDFSNADFRNINFSKINPSGFMLRDGDI--------------IKG 225

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  86 ANLSNTNLAGADLENSYLNGADLSGANLKNVRLDRAFLLQANLSNADLNGASL--FQSNLREANLNGANLT-SANLNATI 162
Cdd:PRK15377 226 FNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEASLKYSITtqQQPSFIETTLKNTIIIhKANLSGVI 305

                        170
                 ....*....|
gi 763313223 163 LPDGKVSQPN 172
Cdd:PRK15377 306 LNEPDNSSPP 315
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
92-163 7.60e-09

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 52.25  E-value: 7.60e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 763313223  92 NLAGADLENSYLNGADLSGANLKNVRLDRAFllqanlSNADLNGASLFQSNLREANLNGANLTSANLNATIL 163
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGAL------SGANLSGANLSGANLTGANLSGADLSGADLSGANL 66
PRK15197 PRK15197
type III secretion system effector PipB;
42-136 9.61e-09

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 53.01  E-value: 9.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763313223  42 NLSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGAdlensYLNGADLSGANLKNVRLDRA 121
Cdd:PRK15197 180 DFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAA-----ILFGSDLTDTKLNGAKLDKI 254

                         90
                 ....*....|....*.
gi 763313223 122 FL-LQANLSNADLNGA 136
Cdd:PRK15197 255 ALtLAKALTGADLTGS 270
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 66-105 3.71e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 47.33  E-value: 3.71e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 763313223   66 ADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNG 105
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 41-78 4.33e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.95  E-value: 4.33e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 763313223   41 CNLSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAIL 78
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
56-128 8.54e-08

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 47.27  E-value: 8.54e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 763313223   56 ADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADL-----SGANLKNVRLDRAFLLQANL 128
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLknaqfSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 52-90 1.17e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.79  E-value: 1.17e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 763313223   52 NLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSN 90
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
90-158 3.97e-07

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 45.34  E-value: 3.97e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 763313223   90 NTNLAGADLENSYLNGADLSGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANL 158
Cdd:pfam13599  10 GCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 61-100 4.07e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 44.64  E-value: 4.07e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 763313223   61 SYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLEN 100
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 56-93 6.57e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 43.87  E-value: 6.57e-07
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 763313223   56 ADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNL 93
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 81-118 1.07e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 43.48  E-value: 1.07e-06
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 763313223   81 TNLRKANLSNTNLAGADLENSYLNGADLSGANLKNVRL 118
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
96-167 3.48e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 43.03  E-value: 3.48e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 763313223   96 ADLENSYLNGADLSGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATILPDGK 167
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVK 72
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 106-144 3.63e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.94  E-value: 3.63e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 763313223  106 ADLSGANLKNVRLDRAFLLQANLSNADLNGASLFQSNLR 144
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 41-75 3.78e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.94  E-value: 3.78e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 763313223   41 CNLSGAQLSGVNLSKADLRGSYLEGADLSGADLSG 75
Cdd:pfam00805   6 ANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 86-135 5.15e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.56  E-value: 5.15e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 763313223   86 ANLSNTNLAGADLENSYLNGADLSGANLKNvrldrafllqANLSNADLNG 135
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSG----------ADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 126-163 6.88e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.17  E-value: 6.88e-06
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 763313223  126 ANLSNADLNGASLFQSNLREANLNGANLTSANLNATIL 163
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 126-159 9.76e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.79  E-value: 9.76e-06
                          10        20        30
                  ....*....|....*....|....*....|....
gi 763313223  126 ANLSNADLNGASLFQSNLREANLNGANLTSANLN 159
Cdd:pfam00805   6 ANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
41-108 1.98e-05

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 41.11  E-value: 1.98e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 763313223   41 CNLSGAQLSGVNLSKADLRGSYLEGADLSGADLSGAILIRTNLRKANLSNTNLAGADLENSYLNGADL 108
Cdd:pfam13599  11 CKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 91-138 3.09e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 39.25  E-value: 3.09e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 763313223   91 TNLAGADLENSYLNGADLSGANLKNvrldrafllqANLSNADLNGASL 138
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTG----------ANLSGADLSGANL 38
PRK15196 PRK15196
type III secretion system effector PipB2;
110-165 1.64e-03

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 38.06  E-value: 1.64e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 763313223 110 GANLKNVRLDRAFLLQANLSNADLNGASLFQSNLREANLNGANLTSANLNATILPD 165
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGD 206
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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