|
Name |
Accession |
Description |
Interval |
E-value |
| AlaS |
COG0013 |
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA ... |
1-883 |
0e+00 |
|
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439784 [Multi-domain] Cd Length: 880 Bit Score: 1513.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 1 MPSLNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNDLDNV 80
Cdd:COG0013 1 MMTSAEIRQKFLDFFESKGHTIVPSSSLVPKNDPTLLFTNAGMVQFKPYFLGQEKPPYPRATTSQKCVRTGGKHNDLENV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 81 GYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWKK-VGVPEERIIRIATSDNF 159
Cdd:COG0013 81 GYTARHHTFFEMLGNFSFGDYFKEEAIAWAWELLTEVLGLPKERLWVTVYEDDDEAYDIWKKeIGVPEERIIRLGKKDNF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 160 WQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQG 239
Cdd:COG0013 161 WEMGDTGPCGPCSEIFYDRGPEYGGGPPGSPGEDGDRYIEIWNLVFMQFNRDEDGTLTPLPKKNIDTGMGLERIAAVLQG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 240 THDNYETDLFKYLIEASATVT--KSEPYGDQNVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGA 317
Cdd:COG0013 241 VHSNYETDLFRPLIEAAAELTgvKYGADEEDDVSLRVIADHIRAVAFLIADGVLPSNEGRGYVLRRILRRAVRHGRLLGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 318 TDPVMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEK--GDVLPGETAFKLYDTFG 395
Cdd:COG0013 321 KEPFLYKLVPVVVEEMGDAYPELKEKQELIEKVLKAEEERFLRTLERGLKLLDEAIAKLKAagGKVLSGEDAFKLYDTYG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 396 FPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGIGLGDATDVKVYFDIVDAEGTTEFLGYETEKAEGQIVALVKDG 475
Cdd:COG0013 401 FPLDLTEEIARERGLTVDEEGFEAAMEEQRERARAAAKFSGDAAVDGVWRELLEEGGPTEFVGYDTLEAEAKVLALVKDG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 476 ARVDSAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKK-VEGLFLHIAEVTEGEIAVGSGAAMEVDHVR 554
Cdd:COG0013 481 ELVDSAKAGEEVEVVLDRTPFYAESGGQVGDTGTIEGDGGVFEVTDTQKpPGGLIVHIGKVEEGELKVGDTVTAQVDAER 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 555 RSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDA 634
Cdd:COG0013 561 RRAIARNHSATHLLHAALREVLGEHVTQAGSLVAPDRLRFDFSHFEALTPEELAEIEDLVNEKIRENLPVETREMPLDEA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 635 RALGAQALFGEKYGEEVRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIEALTGAAAFA 714
Cdd:COG0013 641 KALGAMALFGEKYGDEVRVVSIG-----------DFSRELCGGTHVSRTGDIGLFKIVSESSVAAGVRRIEAVTGEAALE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 715 HLEREAGRMAEVAASLKAQPADVMERLKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQGVSGKD 794
Cdd:COG0013 710 YLREQEALLKELAELLKAPPEELPERVEALLEELKELEKELEQLKAKLASAAADDLLAQAEEIGGVKVLAARVEGVDAKD 789
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 795 LRGLIDAHKQKIGSGVILLIAEDDGKVAVAAGVTDDLTGE-ISAVDVLKAAVPAVggkggggRPDMAQGGGKDFSGADEA 873
Cdd:COG0013 790 LRDLADDLKDKLGSGVVVLASVADGKVSLVAGVTKDLVKKgLKAGDLVKEVAKIVggg-gggRPDMAQAGGKDPSKLDEA 868
|
890
....*....|
gi 763147431 874 IKAAEALLKG 883
Cdd:COG0013 869 LAAVKEWLAE 878
|
|
| alaS |
TIGR00344 |
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the ... |
6-864 |
0e+00 |
|
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the reaction (tRNAala + L-alanine + ATP = L-alanyl-tRNAala + pyrophosphate + AMP). [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273026 [Multi-domain] Cd Length: 845 Bit Score: 941.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 6 DIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAggkhNDLDNVGYTAR 85
Cdd:TIGR00344 1 EIRQTFLDFFKEKGHQVIPSAPLVPRNDPTLLLTNAGMAQFKPIFTGIVKPPSNRLTNAQPCIRL----NDLENVGRTAR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 86 HHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWKKVGVPEERIIRIATSDNFWQMGDt 165
Cdd:TIGR00344 77 HHTLFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLDKERLYVTVYEDDEEAYKIWEKIGIPADRIIKCDAKDNFWDMGD- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 166 GPCGPCTEIFYDHgdhiWGGPPGSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGTHDNYE 245
Cdd:TIGR00344 156 GPCGPCTEIYYDF----VGGKPGEPLEENDRYLEVWNLVFMQFNRDPDGNYTPLPKKNIDTGMGLERFVAVLQGVPTNYD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 246 TDLFKYLIEASATVTKSEPY-----------GDQNVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRRIMRRAMRHASL 314
Cdd:TIGR00344 232 TDIFLPLIEKIEEITGVKYDsnnagimdekrVEDLRSLRVIADHTRAIAFMLADGVVPSNEGRGYVLRRLIRRALRHGKK 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 315 LGATDPVMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEKgDVLPGETAFKLYDTF 394
Cdd:TIGR00344 312 LGLKEAFLYKLVPTLIEVLGDYYPELKEKQEFVEQILELEEERFAKTLERGLRLFEKLLKKTGK-KELDGEDAFKLYDTY 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 395 GFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAggiglgdATDVKV-YFDIVDAEGTTEFLGYETEKAEGQIVALVK 473
Cdd:TIGR00344 391 GFPVELTKEIAEERGLTVDMPGFEALMAEQRERSKQ-------NSQFQEqEIALVNVYPATEFLGYDDLEFEAKVIGLFD 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 474 DGARVDSAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGEIAVGSGAAMEVDHV 553
Cdd:TIGR00344 464 DGYLVEQALAGQSVYVILDQTPFYAESGGQIGDTGYLIANDGKFRVVDVQKPNGVVFHFGEVEGGSLKVGDKVIAVIDEK 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 554 RRSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDD 633
Cdd:TIGR00344 544 RRFRIMRNHSATHLLHAALQKVLGNHVWQAGSLVSFKKLRFDFSHFRALTREELEEIEDLANEQILANIPIKVIFMDLDE 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 634 ARALGAQALFGEKY--GEEVRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIEALTGAA 711
Cdd:TIGR00344 624 AKRKGAFALFGEKYvpGEKVRVVSVG-----------DFSVELCGGTHVRNTGEIGLFKIVKESGIAAGVRRIEAVTGEA 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 712 AFAHLEREAGRMAEVAASLKAQPADVMERLKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQGVS 791
Cdd:TIGR00344 693 AIEYLNEQEDKLKELADILKVTPNELPKKVERFFEEWKALQKELESLKLKIADQKIDELKDKAETINGVKVLVEVVDAKD 772
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 763147431 792 GKDLRGLIDAHKQKIGSGVILLIAEDDGKVAVAAGVTDDL-TGEISAVDVLKaAVPAVGGKGGGGRPDMAQGGG 864
Cdd:TIGR00344 773 MKSLKTMADRLKSKLGSAIYVLASFAEGKVKLVCGVSNDVlTKKIKAGELIN-QIAQVLGGKGGGRPDFAQGGG 845
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
3-882 |
0e+00 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 924.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 3 SLNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTG-----VDRRDYVRATTAQKCVRAGGKHNDL 77
Cdd:PLN02900 12 PGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGtadpnTPLRKLPRATNTQKCIRAGGKHNDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 78 DNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDD------EAFEIWKKVgVPEERII 151
Cdd:PLN02900 92 DDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEkqapddEARAIWLDY-LPEERVL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 152 RIATSDNFWQMGDTGPCGPCTEIFYD-HGDHiwgGPPGSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGL 230
Cdd:PLN02900 171 PFGCKDNFWEMGDTGPCGPCSEIHYDrIGER---DAADLVNNDDPRFIEIWNLVFIQFNREADGSLKPLPAKHVDTGMGL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 231 ERIAALLQGTHDNYETDLFKYLIEASATVTKSEPY----GDQNVHH-----RVIADHLRSCSFLIAEGVLPSNEGRGYVL 301
Cdd:PLN02900 248 ERLASILQNKPSNYDTDLFMPIFDAIQEATGARPYagkvGAEDDDRvdmayRVVADHIRTLSFAIADGVVPSNEGRGYVL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 302 RRIMRRAMRHASLLGATDPV-MHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGD--LEK 378
Cdd:PLN02900 328 RRLLRRAVRYGRLLLGAEEGfFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFKKALAAakANG 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 379 GDVLPGETAFKLYDTFGFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGIGLGDATDVkvyfdiVDAE------- 451
Cdd:PLN02900 408 GPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHLKAGGGAIE------LAAEatswlqk 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 452 ----GTTEFLGYET-EKAEGQIVALVKDGARVDSAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAA-RITDTKKV 525
Cdd:PLN02900 482 qgvaATDDFLKYDWlSDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLEGSGGAVvEVSDVQKA 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 526 EGLFLHIAEVTEGEIAVGSGAAMEVDHVRRSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAE 605
Cdd:PLN02900 562 GGFVLHIGTVTEGSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKPMTPE 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 606 DLSKISAEVNDFIRQNSAVSTRIMTPDDARAL-GAQALFGEKYGEEVRVVSMGRaptgkgadgeTYSIELCGGTHVKQTG 684
Cdd:PLN02900 642 ELREVESLVNEWIGDALPVEAKEMPLADAKRInGLRAVFGEKYPDPVRVVSVGG----------VYSMELCGGTHVSNTA 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 685 DIGTFVILGDSASSAGVRRIEALTGAAAFAHLEREAGRMAEVAASLK------------------------AQPADVMER 740
Cdd:PLN02900 712 EAEAFKLLSEEGIAKGIRRITAVTGGAAVEAINAADSLERELDSALKvegsdlekkvaslksrvdaavipaAKKEEIRAR 791
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 741 LKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQGVSGKDLRGLIDAHKQKIGSGVILLIA--EDD 818
Cdd:PLN02900 792 VSALQKELRAAQKEAAALRAKLAVAKATELASKALSAGKSVLVARLDVGVDAAALKEAAEKVIAKLGDPAAVVLSsdEEK 871
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 763147431 819 GKVAVAAGVTDDLT-GEISAVDVLKAAVPaVGGKGGGGRPDMAQGGGKDFSGADEAIKAAEALLK 882
Cdd:PLN02900 872 GKVSLVAAVPPGVVkKGLKAGKWLGAIAK-LCGGGGGGKPGFAQGQGRDAEKLDAALEKARAFAV 935
|
|
| tRNA-synt_2c |
pfam01411 |
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be ... |
6-554 |
0e+00 |
|
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Pssm-ID: 279719 [Multi-domain] Cd Length: 548 Bit Score: 760.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 6 DIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTG-VDRRDYVRATTAQKCVRAGgkhnDLDNVGYTA 84
Cdd:pfam01411 1 EIRQTFLDFFEKKGHTRVPSSPVVPRNDPTLLFTNAGMNQFKPIFLGgVAKPPYNRATNSQKCIRAG----DLENVGRTG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 85 RHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWKK-VGVPEERIIRIATSDNFWQMG 163
Cdd:pfam01411 77 RHHTFFEMLGNFSFGDYFKEEAIEYAWELLTKELGLPPERLYVTVFEWDDEAGPIWEKiVGGPEERILRFGDKDNFWEMG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 164 DTGPCGPCTEIFYDHGDHIWGGPPGSPEE-DGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGTHD 242
Cdd:pfam01411 157 DTGPCGPCSEIDYDRGEEIGGWDSGGTPTaDDDRFLEIWNLVFMQFNRENDGTLKPLPKKSIDTGMGLERLVAVLQDVRS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 243 NYETDLFKYLIEASATVTKSEPYGDQ--NVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGATDP 320
Cdd:pfam01411 237 NYDTDVFIPVIELIEEISGARYYTVDetDEAYRVIADHTRALTFALADGVVPSNEGRGYVLRRILRRAVRHAKKLGLKEP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 321 VMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEKG-DVLPGETAFKLYDTFGFPLD 399
Cdd:pfam01411 317 FLYDLVPTVVEVLGDAYPELKEDEDFIQEILELEEERFAKTLERGLRLLERLIAKLKKGkKTLPGEDAFKLYDTYGFPVD 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 400 LTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGIGLGDATDvkvYFDIVDAEGTTEFLGYETEKAEGQIVALVKDGARVD 479
Cdd:pfam01411 397 LTKEIAEERGLKVDMPGFEYAMVEQRERSKQAVKEKGEKLD---VSALKELPATTEFLGYDDLESEAKILALPKDGEFVA 473
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 763147431 480 SAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGEIAVGSGAAMEVDHVR 554
Cdd:pfam01411 474 EVLAGQEGGVILDRTPFYAESGGQIGDTGYIIGDGGEFRVTDVQKYGGVVVHKGKLESGKLKVGDKVIAVIDEDR 548
|
|
| AlaRS_core |
cd00673 |
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is ... |
4-240 |
6.48e-130 |
|
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.
Pssm-ID: 238360 [Multi-domain] Cd Length: 232 Bit Score: 389.03 E-value: 6.48e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 4 LNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNdldnVGYT 83
Cdd:cd00673 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVNSQKCIRAGDIDN----VGKT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 84 ARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWK-KVGVPEERIIRIATSDNFWQM 162
Cdd:cd00673 77 GRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKDRLYVSVFEGDDEEEAIWWwKIGLPGIRIERIGFKDNFWEM 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 763147431 163 GDTGPCGPCTEIFYDHGDHIWGGPpgSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGT 240
Cdd:cd00673 157 GGNGPCGPCSEIFYDRGEERDAAS--LPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVWVLQGV 232
|
|
| a_tRNA_ed_AlaXM |
NF040865 |
alanyl-tRNA editing protein AlaXM; |
476-705 |
5.38e-22 |
|
alanyl-tRNA editing protein AlaXM;
Pssm-ID: 468802 [Multi-domain] Cd Length: 234 Bit Score: 95.76 E-value: 5.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 476 ARVDSAKAGEsvqIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGEIaVGSGAAMEVDHVRR 555
Cdd:NF040865 16 ATVVRVKGNG---VVLDRTAFYPTGGGQPHDTGTLVRDDKEFRVVDVRKEGGEIAHVVDRAPGLK-PGDKVKGEIDWDRR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 556 SQIRANHSATHLLHEALRNALGDHVAqkGSLNAADRLRFDFSHnKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDAR 635
Cdd:NF040865 92 YRLMRYHTASHILSAVLYREYGALIT--GGQISPDKARVDFSL-ENFDRELLEEIIEEANEIIAEGIEVKIYWLPREEAL 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 763147431 636 ALGAQALFGEKYG---EEVRVVSMgraptgkgadgETYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIE 705
Cdd:NF040865 169 KIPGLVRLAKRLPpeiEEVRIVEI-----------EGVDIQADGGTHVKNTGEIGEIKILKRENKGKGNKRLY 230
|
|
| tRNA_SAD |
smart00863 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of ... |
651-704 |
2.37e-14 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 197931 [Multi-domain] Cd Length: 43 Bit Score: 67.79 E-value: 2.37e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 763147431 651 VRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRI 704
Cdd:smart00863 1 VRVVSIG-----------DFSVELCGGTHVPNTGEIGAFKILSVSGAYWGLQRI 43
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| AlaS |
COG0013 |
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA ... |
1-883 |
0e+00 |
|
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439784 [Multi-domain] Cd Length: 880 Bit Score: 1513.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 1 MPSLNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNDLDNV 80
Cdd:COG0013 1 MMTSAEIRQKFLDFFESKGHTIVPSSSLVPKNDPTLLFTNAGMVQFKPYFLGQEKPPYPRATTSQKCVRTGGKHNDLENV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 81 GYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWKK-VGVPEERIIRIATSDNF 159
Cdd:COG0013 81 GYTARHHTFFEMLGNFSFGDYFKEEAIAWAWELLTEVLGLPKERLWVTVYEDDDEAYDIWKKeIGVPEERIIRLGKKDNF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 160 WQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQG 239
Cdd:COG0013 161 WEMGDTGPCGPCSEIFYDRGPEYGGGPPGSPGEDGDRYIEIWNLVFMQFNRDEDGTLTPLPKKNIDTGMGLERIAAVLQG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 240 THDNYETDLFKYLIEASATVT--KSEPYGDQNVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGA 317
Cdd:COG0013 241 VHSNYETDLFRPLIEAAAELTgvKYGADEEDDVSLRVIADHIRAVAFLIADGVLPSNEGRGYVLRRILRRAVRHGRLLGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 318 TDPVMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEK--GDVLPGETAFKLYDTFG 395
Cdd:COG0013 321 KEPFLYKLVPVVVEEMGDAYPELKEKQELIEKVLKAEEERFLRTLERGLKLLDEAIAKLKAagGKVLSGEDAFKLYDTYG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 396 FPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGIGLGDATDVKVYFDIVDAEGTTEFLGYETEKAEGQIVALVKDG 475
Cdd:COG0013 401 FPLDLTEEIARERGLTVDEEGFEAAMEEQRERARAAAKFSGDAAVDGVWRELLEEGGPTEFVGYDTLEAEAKVLALVKDG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 476 ARVDSAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKK-VEGLFLHIAEVTEGEIAVGSGAAMEVDHVR 554
Cdd:COG0013 481 ELVDSAKAGEEVEVVLDRTPFYAESGGQVGDTGTIEGDGGVFEVTDTQKpPGGLIVHIGKVEEGELKVGDTVTAQVDAER 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 555 RSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDA 634
Cdd:COG0013 561 RRAIARNHSATHLLHAALREVLGEHVTQAGSLVAPDRLRFDFSHFEALTPEELAEIEDLVNEKIRENLPVETREMPLDEA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 635 RALGAQALFGEKYGEEVRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIEALTGAAAFA 714
Cdd:COG0013 641 KALGAMALFGEKYGDEVRVVSIG-----------DFSRELCGGTHVSRTGDIGLFKIVSESSVAAGVRRIEAVTGEAALE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 715 HLEREAGRMAEVAASLKAQPADVMERLKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQGVSGKD 794
Cdd:COG0013 710 YLREQEALLKELAELLKAPPEELPERVEALLEELKELEKELEQLKAKLASAAADDLLAQAEEIGGVKVLAARVEGVDAKD 789
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 795 LRGLIDAHKQKIGSGVILLIAEDDGKVAVAAGVTDDLTGE-ISAVDVLKAAVPAVggkggggRPDMAQGGGKDFSGADEA 873
Cdd:COG0013 790 LRDLADDLKDKLGSGVVVLASVADGKVSLVAGVTKDLVKKgLKAGDLVKEVAKIVggg-gggRPDMAQAGGKDPSKLDEA 868
|
890
....*....|
gi 763147431 874 IKAAEALLKG 883
Cdd:COG0013 869 LAAVKEWLAE 878
|
|
| alaS |
TIGR00344 |
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the ... |
6-864 |
0e+00 |
|
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the reaction (tRNAala + L-alanine + ATP = L-alanyl-tRNAala + pyrophosphate + AMP). [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273026 [Multi-domain] Cd Length: 845 Bit Score: 941.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 6 DIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAggkhNDLDNVGYTAR 85
Cdd:TIGR00344 1 EIRQTFLDFFKEKGHQVIPSAPLVPRNDPTLLLTNAGMAQFKPIFTGIVKPPSNRLTNAQPCIRL----NDLENVGRTAR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 86 HHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWKKVGVPEERIIRIATSDNFWQMGDt 165
Cdd:TIGR00344 77 HHTLFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLDKERLYVTVYEDDEEAYKIWEKIGIPADRIIKCDAKDNFWDMGD- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 166 GPCGPCTEIFYDHgdhiWGGPPGSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGTHDNYE 245
Cdd:TIGR00344 156 GPCGPCTEIYYDF----VGGKPGEPLEENDRYLEVWNLVFMQFNRDPDGNYTPLPKKNIDTGMGLERFVAVLQGVPTNYD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 246 TDLFKYLIEASATVTKSEPY-----------GDQNVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRRIMRRAMRHASL 314
Cdd:TIGR00344 232 TDIFLPLIEKIEEITGVKYDsnnagimdekrVEDLRSLRVIADHTRAIAFMLADGVVPSNEGRGYVLRRLIRRALRHGKK 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 315 LGATDPVMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEKgDVLPGETAFKLYDTF 394
Cdd:TIGR00344 312 LGLKEAFLYKLVPTLIEVLGDYYPELKEKQEFVEQILELEEERFAKTLERGLRLFEKLLKKTGK-KELDGEDAFKLYDTY 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 395 GFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAggiglgdATDVKV-YFDIVDAEGTTEFLGYETEKAEGQIVALVK 473
Cdd:TIGR00344 391 GFPVELTKEIAEERGLTVDMPGFEALMAEQRERSKQ-------NSQFQEqEIALVNVYPATEFLGYDDLEFEAKVIGLFD 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 474 DGARVDSAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGEIAVGSGAAMEVDHV 553
Cdd:TIGR00344 464 DGYLVEQALAGQSVYVILDQTPFYAESGGQIGDTGYLIANDGKFRVVDVQKPNGVVFHFGEVEGGSLKVGDKVIAVIDEK 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 554 RRSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDD 633
Cdd:TIGR00344 544 RRFRIMRNHSATHLLHAALQKVLGNHVWQAGSLVSFKKLRFDFSHFRALTREELEEIEDLANEQILANIPIKVIFMDLDE 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 634 ARALGAQALFGEKY--GEEVRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIEALTGAA 711
Cdd:TIGR00344 624 AKRKGAFALFGEKYvpGEKVRVVSVG-----------DFSVELCGGTHVRNTGEIGLFKIVKESGIAAGVRRIEAVTGEA 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 712 AFAHLEREAGRMAEVAASLKAQPADVMERLKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQGVS 791
Cdd:TIGR00344 693 AIEYLNEQEDKLKELADILKVTPNELPKKVERFFEEWKALQKELESLKLKIADQKIDELKDKAETINGVKVLVEVVDAKD 772
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 763147431 792 GKDLRGLIDAHKQKIGSGVILLIAEDDGKVAVAAGVTDDL-TGEISAVDVLKaAVPAVGGKGGGGRPDMAQGGG 864
Cdd:TIGR00344 773 MKSLKTMADRLKSKLGSAIYVLASFAEGKVKLVCGVSNDVlTKKIKAGELIN-QIAQVLGGKGGGRPDFAQGGG 845
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
3-882 |
0e+00 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 924.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 3 SLNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTG-----VDRRDYVRATTAQKCVRAGGKHNDL 77
Cdd:PLN02900 12 PGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGtadpnTPLRKLPRATNTQKCIRAGGKHNDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 78 DNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDD------EAFEIWKKVgVPEERII 151
Cdd:PLN02900 92 DDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEkqapddEARAIWLDY-LPEERVL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 152 RIATSDNFWQMGDTGPCGPCTEIFYD-HGDHiwgGPPGSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGL 230
Cdd:PLN02900 171 PFGCKDNFWEMGDTGPCGPCSEIHYDrIGER---DAADLVNNDDPRFIEIWNLVFIQFNREADGSLKPLPAKHVDTGMGL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 231 ERIAALLQGTHDNYETDLFKYLIEASATVTKSEPY----GDQNVHH-----RVIADHLRSCSFLIAEGVLPSNEGRGYVL 301
Cdd:PLN02900 248 ERLASILQNKPSNYDTDLFMPIFDAIQEATGARPYagkvGAEDDDRvdmayRVVADHIRTLSFAIADGVVPSNEGRGYVL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 302 RRIMRRAMRHASLLGATDPV-MHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGD--LEK 378
Cdd:PLN02900 328 RRLLRRAVRYGRLLLGAEEGfFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFKKALAAakANG 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 379 GDVLPGETAFKLYDTFGFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGIGLGDATDVkvyfdiVDAE------- 451
Cdd:PLN02900 408 GPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHLKAGGGAIE------LAAEatswlqk 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 452 ----GTTEFLGYET-EKAEGQIVALVKDGARVDSAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAA-RITDTKKV 525
Cdd:PLN02900 482 qgvaATDDFLKYDWlSDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLEGSGGAVvEVSDVQKA 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 526 EGLFLHIAEVTEGEIAVGSGAAMEVDHVRRSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAE 605
Cdd:PLN02900 562 GGFVLHIGTVTEGSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKPMTPE 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 606 DLSKISAEVNDFIRQNSAVSTRIMTPDDARAL-GAQALFGEKYGEEVRVVSMGRaptgkgadgeTYSIELCGGTHVKQTG 684
Cdd:PLN02900 642 ELREVESLVNEWIGDALPVEAKEMPLADAKRInGLRAVFGEKYPDPVRVVSVGG----------VYSMELCGGTHVSNTA 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 685 DIGTFVILGDSASSAGVRRIEALTGAAAFAHLEREAGRMAEVAASLK------------------------AQPADVMER 740
Cdd:PLN02900 712 EAEAFKLLSEEGIAKGIRRITAVTGGAAVEAINAADSLERELDSALKvegsdlekkvaslksrvdaavipaAKKEEIRAR 791
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 741 LKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQGVSGKDLRGLIDAHKQKIGSGVILLIA--EDD 818
Cdd:PLN02900 792 VSALQKELRAAQKEAAALRAKLAVAKATELASKALSAGKSVLVARLDVGVDAAALKEAAEKVIAKLGDPAAVVLSsdEEK 871
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 763147431 819 GKVAVAAGVTDDLT-GEISAVDVLKAAVPaVGGKGGGGRPDMAQGGGKDFSGADEAIKAAEALLK 882
Cdd:PLN02900 872 GKVSLVAAVPPGVVkKGLKAGKWLGAIAK-LCGGGGGGKPGFAQGQGRDAEKLDAALEKARAFAV 935
|
|
| tRNA-synt_2c |
pfam01411 |
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be ... |
6-554 |
0e+00 |
|
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Pssm-ID: 279719 [Multi-domain] Cd Length: 548 Bit Score: 760.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 6 DIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTG-VDRRDYVRATTAQKCVRAGgkhnDLDNVGYTA 84
Cdd:pfam01411 1 EIRQTFLDFFEKKGHTRVPSSPVVPRNDPTLLFTNAGMNQFKPIFLGgVAKPPYNRATNSQKCIRAG----DLENVGRTG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 85 RHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWKK-VGVPEERIIRIATSDNFWQMG 163
Cdd:pfam01411 77 RHHTFFEMLGNFSFGDYFKEEAIEYAWELLTKELGLPPERLYVTVFEWDDEAGPIWEKiVGGPEERILRFGDKDNFWEMG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 164 DTGPCGPCTEIFYDHGDHIWGGPPGSPEE-DGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGTHD 242
Cdd:pfam01411 157 DTGPCGPCSEIDYDRGEEIGGWDSGGTPTaDDDRFLEIWNLVFMQFNRENDGTLKPLPKKSIDTGMGLERLVAVLQDVRS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 243 NYETDLFKYLIEASATVTKSEPYGDQ--NVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGATDP 320
Cdd:pfam01411 237 NYDTDVFIPVIELIEEISGARYYTVDetDEAYRVIADHTRALTFALADGVVPSNEGRGYVLRRILRRAVRHAKKLGLKEP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 321 VMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEKG-DVLPGETAFKLYDTFGFPLD 399
Cdd:pfam01411 317 FLYDLVPTVVEVLGDAYPELKEDEDFIQEILELEEERFAKTLERGLRLLERLIAKLKKGkKTLPGEDAFKLYDTYGFPVD 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 400 LTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGIGLGDATDvkvYFDIVDAEGTTEFLGYETEKAEGQIVALVKDGARVD 479
Cdd:pfam01411 397 LTKEIAEERGLKVDMPGFEYAMVEQRERSKQAVKEKGEKLD---VSALKELPATTEFLGYDDLESEAKILALPKDGEFVA 473
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 763147431 480 SAKAGESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGEIAVGSGAAMEVDHVR 554
Cdd:pfam01411 474 EVLAGQEGGVILDRTPFYAESGGQIGDTGYIIGDGGEFRVTDVQKYGGVVVHKGKLESGKLKVGDKVIAVIDEDR 548
|
|
| PRK01584 |
PRK01584 |
alanyl-tRNA synthetase; Provisional |
4-707 |
1.52e-163 |
|
alanyl-tRNA synthetase; Provisional
Pssm-ID: 234962 [Multi-domain] Cd Length: 594 Bit Score: 489.67 E-value: 1.52e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 4 LNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGgkhnDLDNVGyT 83
Cdd:PRK01584 3 LDELRKKYIDFFKSKGHVEIAGKSLIPENDPTVLFTTAGMHPLVPYLLGEPHPSGTRLVDVQKCLRTG----DIDEVG-D 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 84 ARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGE--FDIPKDKLYTTVYHTDD------EAFEIWKKVGVPEERIIRIAT 155
Cdd:PRK01584 78 LSHLTFFEMLGNWSLGAYFKEESIKYSFEFLTSPdyLNIPKDKLYVTVFEGDEeiprdeETASVWESLGIPKDRIFYLSR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 156 SDNFW-QMGDTGPCGPCTEIFYDHGDhiwggPPGS----PEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGL 230
Cdd:PRK01584 158 EHNWWgPVGETGPCGPDTEIFVDTGK-----PKCSvncrPTCSCGKYFEIWNNVFMQYNKDEDGNYEELKRKCVDTGMGI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 231 ERIAALLQGTHDNYETDLFKYLIEASATVTkSEPYGDQNVHH---RVIADHLRSCSFLIAE--GVLPSNEGRGYVLRRIM 305
Cdd:PRK01584 233 ERTIAFLQGKSSVYDTEAFTPIIKRIEKIS-GKIYGQNEEDDrsiRIIADHIRAACFILGDpfVVLPSNVGQGYVLRRLI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 306 RRAMRHASLLGATDPVMHKLVPALVSQMGAAYPELGQGQALIEETFEQEETRFLKTLDRGLKLLDDASGDLEKGDVLPGE 385
Cdd:PRK01584 312 RRSIRHAKKLGIESHFLADLVDSVEEIYGSFYPELTEKKDFIKEELNKEEEKFFKTLRKGEQEFIKLIPNLGSSKIIPGD 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 386 TAFKLYDTFGFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGGiglgdatdvkvyfdivdaegtteflgyetekae 465
Cdd:PRK01584 392 IAFKLYDTYGFPYEITEELASEYGFTVDREGFDEHFKKHQKVSKKGA--------------------------------- 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 466 gqivalvkdgarvdsakagesvqiilnQTPFYGesggqvgdsgmltveggaaritdtkkveGLFLHIAEVTegeiavgsg 545
Cdd:PRK01584 439 ---------------------------DKVFKG----------------------------GLADHSYETT--------- 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 546 aamevdhvrrsqirANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEVNDFIRQNSAVS 625
Cdd:PRK01584 455 --------------KLHTATHLLHKALRLVLGDHVRQKGSNITAERLRFDFSHPEKMTDDEIKKVEDIVNLQIKNDLSVK 520
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 626 TRIMTPDDARALGAQALFGEKYGEEVRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIE 705
Cdd:PRK01584 521 KEVMSLEEAREKGAMALFGEKYEDIVKVYEID-----------GFSKEVCGGPHVENTGELGTFKIQKEQSSSSGVRRIR 589
|
..
gi 763147431 706 AL 707
Cdd:PRK01584 590 AI 591
|
|
| AlaRS_core |
cd00673 |
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is ... |
4-240 |
6.48e-130 |
|
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.
Pssm-ID: 238360 [Multi-domain] Cd Length: 232 Bit Score: 389.03 E-value: 6.48e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 4 LNDIRSTFLNYFAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNdldnVGYT 83
Cdd:cd00673 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVNSQKCIRAGDIDN----VGKT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 84 ARHHTFFEMLGNFSFGDYFKNEAIPFAWELITGEFDIPKDKLYTTVYHTDDEAFEIWK-KVGVPEERIIRIATSDNFWQM 162
Cdd:cd00673 77 GRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKDRLYVSVFEGDDEEEAIWWwKIGLPGIRIERIGFKDNFWEM 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 763147431 163 GDTGPCGPCTEIFYDHGDHIWGGPpgSPEEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGT 240
Cdd:cd00673 157 GGNGPCGPCSEIFYDRGEERDAAS--LPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVWVLQGV 232
|
|
| AlaX |
COG2872 |
Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis] ... |
476-705 |
7.84e-34 |
|
Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis];
Pssm-ID: 442119 [Multi-domain] Cd Length: 238 Bit Score: 129.93 E-value: 7.84e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 476 ARVDSAKagESVQIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGeIAVGSGAAMEVDHVRR 555
Cdd:COG2872 17 ATVTAVT--EEGGVVLDRTAFYPTGGGQPGDTGTLVWDGKEIRVVDVRKEDGEIVHVLEGAPL-PEVGDEVTGEIDWERR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 556 SQIRANHSATHLLHEALRNALGDHVAqKGSLNaADRLRFDFSHNkAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDAR 635
Cdd:COG2872 94 YRHMRLHTALHLLSAVVYREYGAPVT-GGQIG-EDRARIDFDLP-EFDEEDLEEIEAEANELIAADLPVRIYWITREELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 763147431 636 ALG-----AQALFGEKYGeEVRVVSMGraptgkGADgetysIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIE 705
Cdd:COG2872 171 AIPglvrtMSVLPPPGVG-RVRIVEIG------GVD-----LQPCGGTHVANTGEIGRIKITKIEKKGKGNRRVY 233
|
|
| a_tRNA_ed_AlaXM |
NF040865 |
alanyl-tRNA editing protein AlaXM; |
476-705 |
5.38e-22 |
|
alanyl-tRNA editing protein AlaXM;
Pssm-ID: 468802 [Multi-domain] Cd Length: 234 Bit Score: 95.76 E-value: 5.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 476 ARVDSAKAGEsvqIILNQTPFYGESGGQVGDSGMLTVEGGAARITDTKKVEGLFLHIAEVTEGEIaVGSGAAMEVDHVRR 555
Cdd:NF040865 16 ATVVRVKGNG---VVLDRTAFYPTGGGQPHDTGTLVRDDKEFRVVDVRKEGGEIAHVVDRAPGLK-PGDKVKGEIDWDRR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 556 SQIRANHSATHLLHEALRNALGDHVAqkGSLNAADRLRFDFSHnKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDAR 635
Cdd:NF040865 92 YRLMRYHTASHILSAVLYREYGALIT--GGQISPDKARVDFSL-ENFDRELLEEIIEEANEIIAEGIEVKIYWLPREEAL 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 763147431 636 ALGAQALFGEKYG---EEVRVVSMgraptgkgadgETYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIE 705
Cdd:NF040865 169 KIPGLVRLAKRLPpeiEEVRIVEI-----------EGVDIQADGGTHVKNTGEIGEIKILKRENKGKGNKRLY 230
|
|
| DHHA1 |
pfam02272 |
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called ... |
741-881 |
1.81e-14 |
|
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members. This domains is also found in alanyl tRNA synthetase, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Pssm-ID: 396724 [Multi-domain] Cd Length: 139 Bit Score: 71.32 E-value: 1.81e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 741 LKALMDERKALQNEIATLKQQIAMGGGAGGGAEAKEIGGKTFLGQALQ-GVSGKDLRGLIDAHKQKIGSGVILLIAEDDG 819
Cdd:pfam02272 1 LESLNEELKELEKELEELKEALALLKAKELLEKAEEINGVKVLVAEVGeGWDAGALGIAADRLKKKLGDPVIVLVAKEDG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 763147431 820 -KVAVAAGVTDDltGEISAVDVLKAAVPAVGGkggggR---PDMAQGGGKDFSGADEAIKAAEALL 881
Cdd:pfam02272 81 dKVKVSARSSKD--KGVDAGELLKEVAAILGG-----GgggHDLAAGAGIDAEKLDEALELLEEAI 139
|
|
| tRNA_SAD |
smart00863 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of ... |
651-704 |
2.37e-14 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 197931 [Multi-domain] Cd Length: 43 Bit Score: 67.79 E-value: 2.37e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 763147431 651 VRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRI 704
Cdd:smart00863 1 VRVVSIG-----------DFSVELCGGTHVPNTGEIGAFKILSVSGAYWGLQRI 43
|
|
| tRNA_SAD |
pfam07973 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of ... |
651-704 |
3.20e-13 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 429764 [Multi-domain] Cd Length: 43 Bit Score: 64.39 E-value: 3.20e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 763147431 651 VRVVSMGraptgkgadgeTYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRI 704
Cdd:pfam07973 1 VRVVSIG-----------DFDVDLCGGTHVPNTGEIGAFKILKGESKNKGLRRI 43
|
|
| class_II_aaRS-like_core |
cd00768 |
Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA ... |
15-233 |
3.98e-12 |
|
Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Pssm-ID: 238391 [Multi-domain] Cd Length: 211 Bit Score: 66.37 E-value: 3.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 15 FAKQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNDLdnvgytaRHHTFFEMLG 94
Cdd:cd00768 32 LEKAGHEPKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAEIGPAFRNEGGRRGL-------RRVREFTQLE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 95 NFSFGDYF-----KNEAIPFAWELitgefdipkdklyttvyhtddeafeiWKKVGVPEERIIRIATSDNFWqmgdTGPCG 169
Cdd:cd00768 105 GEVFGEDGeeaseFEELIELTEEL--------------------------LRALGIKLDIVFVEKTPGEFS----PGGAG 154
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 763147431 170 PCTEIFYDHGDHiwggppgspeedgdRFIEIWNLVFMQNE--RFADGSMVDLDMQS-----IDTGMGLERI 233
Cdd:cd00768 155 PGFEIEVDHPEG--------------RGLEIGSGGYRQDEqaRAADLYFLDEALEYrypptIGFGLGLERL 211
|
|
| PLN02961 |
PLN02961 |
alanine-tRNA ligase |
489-693 |
1.23e-09 |
|
alanine-tRNA ligase
Pssm-ID: 178546 [Multi-domain] Cd Length: 223 Bit Score: 59.33 E-value: 1.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 489 IILNQTPFYGESGGQVGDSGMLTVEGGAARI--TDTKKVEGLFLHIAEVTEGEIAVGSGAA------MEVDHVRRSQIRA 560
Cdd:PLN02961 5 LVLDRTIFHPQGGGQPSDTGRIVISGGDTKFsvQDVRRKDGVVYHYGVFEGSNPESASPFEagdevtVTVDESRRKLHSR 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 561 NHSATHLLHEALRN--------ALGDH------VAQKGSLNAADRLRFdfshnkavsaedLSKISAEVNDFIRQNSAVST 626
Cdd:PLN02961 85 LHSAGHLLDVCMARvglgplepGKGYHfpdgpfVEYKGKIPQGELDSK------------QDELEAEANELIAEGGKVSA 152
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 763147431 627 RIMTPDDARALGAQAL--FGEKyGEEVRVVSMGRAPTGKgadgetysielCGGTHVKQTGDIGTFVILG 693
Cdd:PLN02961 153 AVLPYDEAAELCGGSLpdYIAK-DSTPRIVKIGDSPGCP-----------CGGTHVADVSEITSVKVTQ 209
|
|
| ThrS |
COG0441 |
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA ... |
561-700 |
1.03e-03 |
|
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440210 [Multi-domain] Cd Length: 639 Bit Score: 42.71 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 561 NHSATHLLHEALRnalgdhvaqkgslnaadRLR----------------FDFSHNKAVSAEDLSKISAEVNDFIRQNSAV 624
Cdd:COG0441 72 RHSAAHLLAQAVK-----------------RLYpdakltigpviengfyYDFDLERPFTPEDLEKIEKEMKEIIKEDLPI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 763147431 625 STRIMTPDDARalgaqALFGEKyGEEVRVVSMGRAPtgkgaDGETYSI-------ELCGGTHVKQTGDIGTFVILgdsaS 697
Cdd:COG0441 135 EREEVSREEAI-----ELFKEK-GEPYKVELIEDIP-----EDEEISLyrqgefvDLCRGPHVPSTGKIKAFKLL----S 199
|
...
gi 763147431 698 SAG 700
Cdd:COG0441 200 VAG 202
|
|
| |
