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Conserved domains on  [gi|762206547|ref|WP_043877333|]
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phosphoadenylyl-sulfate reductase [Vibrio vulnificus]

Protein Classification

adenylyl/phosphoadenylyl-sulfate reductase( domain architecture ID 10792199)

adenylyl/phosphoadenylyl-sulfate reductase catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS)/phosphoadenosine 5'-phosphosulfate (PAPS) using thioredoxin as the electron donor

CATH:  3.40.50.620
EC:  1.8.4.-
SCOP:  4003838

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK02090 PRK02090
phosphoadenylyl-sulfate reductase;
11-252 6.37e-143

phosphoadenylyl-sulfate reductase;


:

Pssm-ID: 234997  Cd Length: 241  Bit Score: 399.98  E-value: 6.37e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  11 LSELLSLTKAEQSIRLAEINVELEMLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPE 90
Cdd:PRK02090   1 LNALNALPKADLALDLAELNAELEGASAQERLAWALENFGGRLALVSSFGAEDAVLLHLVAQVDPDIPVIFLDTGYLFPE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  91 TYQFIDELTKSLNLNLKVYRANESANWQEARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELNVktWFSGLRREQSQSRA 170
Cdd:PRK02090  81 TYRFIDELTERLLLNLKVYRPDASAAEQEARYGGLWEQSVEDRDECCRIRKVEPLNRALAGLDA--WITGLRREQSGTRA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 171 GLPILSIQNGVFKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFG-LKRECGLHEE 249
Cdd:PRK02090 159 NLPVLEIDGGRFKINPLADWTNEDVWAYLKEHDLPYHPLVDQGYPSIGCEPCTRPVEPGEDERAGRWWGgLKKECGLHEG 238

                 ...
gi 762206547 250 DNE 252
Cdd:PRK02090 239 NLP 241
 
Name Accession Description Interval E-value
PRK02090 PRK02090
phosphoadenylyl-sulfate reductase;
11-252 6.37e-143

phosphoadenylyl-sulfate reductase;


Pssm-ID: 234997  Cd Length: 241  Bit Score: 399.98  E-value: 6.37e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  11 LSELLSLTKAEQSIRLAEINVELEMLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPE 90
Cdd:PRK02090   1 LNALNALPKADLALDLAELNAELEGASAQERLAWALENFGGRLALVSSFGAEDAVLLHLVAQVDPDIPVIFLDTGYLFPE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  91 TYQFIDELTKSLNLNLKVYRANESANWQEARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELNVktWFSGLRREQSQSRA 170
Cdd:PRK02090  81 TYRFIDELTERLLLNLKVYRPDASAAEQEARYGGLWEQSVEDRDECCRIRKVEPLNRALAGLDA--WITGLRREQSGTRA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 171 GLPILSIQNGVFKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFG-LKRECGLHEE 249
Cdd:PRK02090 159 NLPVLEIDGGRFKINPLADWTNEDVWAYLKEHDLPYHPLVDQGYPSIGCEPCTRPVEPGEDERAGRWWGgLKKECGLHEG 238

                 ...
gi 762206547 250 DNE 252
Cdd:PRK02090 239 NLP 241
PAPS_reductase TIGR02057
phosphoadenosine phosphosulfate reductase, thioredoxin dependent; Requiring thioredoxin as an ...
26-247 2.58e-105

phosphoadenosine phosphosulfate reductase, thioredoxin dependent; Requiring thioredoxin as an electron donor, phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylylsulfate (PAPS) to sulfite and phospho-adenosine-phosphate (PAP). Found in enterobacteria, cyanobacteria, and yeast, PAPS reductase is related to a group of plant (TIGR00424) and bacterial (TIGR02055) enzymes preferring 5'-adenylylsulfate (APS) over PAPS as a substrate for reduction to sulfite. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 131112  Cd Length: 226  Bit Score: 304.45  E-value: 2.58e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   26 LAEINVELEMLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSK-QQADIPVILTDTGYLFPETYQFIDELTKSLN- 103
Cdd:TIGR02057   1 LDELNEQLEKLTPQEIIAWSIVTFPHGLVQTSAFGIQALVTLHLLSSiSEPMIPVIFIDTLYHFPQTLTLKDELTKKYYq 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  104 -LNLKVYRANESANWQEARYGKLWEQGieGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSI--QNG 180
Cdd:TIGR02057  81 tLNLYKYDGCESEADFEAKYGKLLWQK--DIEKYDYIAKVEPMQRALKELNASAWFTGRRRDQGSARANLPVIEIdeQNG 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 762206547  181 VFKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFG-LKRECGLH 247
Cdd:TIGR02057 159 ILKVNPLIDWTFEQVYQYLDAHNVPYNPLLDQGYRSIGDYHSTRKVKEGEDERAGRWKGkLKTECGIH 226
CysD COG0175
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or ...
25-246 6.49e-91

3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme [Amino acid transport and metabolism, Coenzyme transport and metabolism]; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439945 [Multi-domain]  Cd Length: 232  Bit Score: 268.25  E-value: 6.49e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  25 RLAEINVELEmLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNL 104
Cdd:COG0175    9 LLEELNAELE-AEAIEILREAAAEFGGRVVVSSSGGKDSTVLLHLAAKFKPPIPVLFLDTGYEFPETYEFRDRLAERLGL 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 105 NLKVYRANESANWQEARYG-KLWEQgieGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSI--QNGV 181
Cdd:COG0175   88 DLIVVRPEDAFAEQLAEFGpPLFYR---DPRWCCKIRKVEPLKRALAGYDFDAWITGLRRDESPTRAKEPVVEWdpVGGL 164
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 762206547 182 FKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFGL---KRECGL 246
Cdd:COG0175  165 IKVNPLADWTELDVWAYIRREDLPYNPLYDQGYPSIGCAPCTRAVESGEDERAGRWWDEekeRKECGL 232
PAPS_reductase cd23945
Phosphoadenylyl-sulfate reductase (thioredoxin); Phosphoadenosine phosphosulfate (PAPS) ...
38-218 2.08e-85

Phosphoadenylyl-sulfate reductase (thioredoxin); Phosphoadenosine phosphosulfate (PAPS) reductase (or PAPS sulfotransferase EC 1.8.4.8) is part of the adenine nucleotide alpha hydrolase superfamily that also includes N-type ATP PPases and ATP sulfurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP).


Pssm-ID: 467510 [Multi-domain]  Cd Length: 183  Bit Score: 252.13  E-value: 2.08e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  38 AQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESANW 117
Cdd:cd23945    1 PLEILLWAAEEFGPKLVFATSFGAEDAVILDLLSKVRPDIPVVFLDTGYLFPETYDLIDEVEARYGLNIEVYFPEGTEAE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 118 QEARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPI--LSIQNGVFKFLPVVDWSNKDV 195
Cdd:cd23945   81 EEALEGGLNEFYLEDEERYDCCRKRKPFPLALALLGVKAWITGRRRDQSPTRANLPIveVDEEGGLVKINPLADWTWEDV 160
                        170       180
                 ....*....|....*....|...
gi 762206547 196 HYYLKEHGLSYHPLWEQGYLSVG 218
Cdd:cd23945  161 WAYIREHDLPYNPLHDQGYPSIG 183
PAPS_reduct pfam01507
Phosphoadenosine phosphosulfate reductase family; This domain is found in phosphoadenosine ...
53-225 2.54e-68

Phosphoadenosine phosphosulfate reductase family; This domain is found in phosphoadenosine phosphosulfate (PAPS) reductase enzymes or PAPS sulfotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP). It is also found in NodP nodulation protein P from Rhizobium which has ATP sulfurylase activity (sulfate adenylate transferase).


Pssm-ID: 396201 [Multi-domain]  Cd Length: 173  Bit Score: 208.69  E-value: 2.54e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   53 HAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESANWQEARYGKLWEQGieg 132
Cdd:pfam01507   2 LVVSFSGGKDSLVLLHLASKAFPPGPVIFIDTGYEFPETYEFVDELEEKYGLNLKVYLPEDSFAEGINPEGIPSSLY--- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  133 iEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSIQNG---VFKFLPVVDWSNKDVHYYLKEHGLSYHPL 209
Cdd:pfam01507  79 -RRCCRLRKVEPLKRALKELGFDAWFTGLRRDESPSRAKLPIVSIDGDfpkVIKVFPLLNWTETDVWQYILANNVPYNPL 157
                         170
                  ....*....|....*.
gi 762206547  210 WEQGYLSVGDTHTTQK 225
Cdd:pfam01507 158 YDQGYRSIGCYPCTGP 173
 
Name Accession Description Interval E-value
PRK02090 PRK02090
phosphoadenylyl-sulfate reductase;
11-252 6.37e-143

phosphoadenylyl-sulfate reductase;


Pssm-ID: 234997  Cd Length: 241  Bit Score: 399.98  E-value: 6.37e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  11 LSELLSLTKAEQSIRLAEINVELEMLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPE 90
Cdd:PRK02090   1 LNALNALPKADLALDLAELNAELEGASAQERLAWALENFGGRLALVSSFGAEDAVLLHLVAQVDPDIPVIFLDTGYLFPE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  91 TYQFIDELTKSLNLNLKVYRANESANWQEARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELNVktWFSGLRREQSQSRA 170
Cdd:PRK02090  81 TYRFIDELTERLLLNLKVYRPDASAAEQEARYGGLWEQSVEDRDECCRIRKVEPLNRALAGLDA--WITGLRREQSGTRA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 171 GLPILSIQNGVFKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFG-LKRECGLHEE 249
Cdd:PRK02090 159 NLPVLEIDGGRFKINPLADWTNEDVWAYLKEHDLPYHPLVDQGYPSIGCEPCTRPVEPGEDERAGRWWGgLKKECGLHEG 238

                 ...
gi 762206547 250 DNE 252
Cdd:PRK02090 239 NLP 241
PAPS_reductase TIGR02057
phosphoadenosine phosphosulfate reductase, thioredoxin dependent; Requiring thioredoxin as an ...
26-247 2.58e-105

phosphoadenosine phosphosulfate reductase, thioredoxin dependent; Requiring thioredoxin as an electron donor, phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylylsulfate (PAPS) to sulfite and phospho-adenosine-phosphate (PAP). Found in enterobacteria, cyanobacteria, and yeast, PAPS reductase is related to a group of plant (TIGR00424) and bacterial (TIGR02055) enzymes preferring 5'-adenylylsulfate (APS) over PAPS as a substrate for reduction to sulfite. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 131112  Cd Length: 226  Bit Score: 304.45  E-value: 2.58e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   26 LAEINVELEMLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSK-QQADIPVILTDTGYLFPETYQFIDELTKSLN- 103
Cdd:TIGR02057   1 LDELNEQLEKLTPQEIIAWSIVTFPHGLVQTSAFGIQALVTLHLLSSiSEPMIPVIFIDTLYHFPQTLTLKDELTKKYYq 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  104 -LNLKVYRANESANWQEARYGKLWEQGieGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSI--QNG 180
Cdd:TIGR02057  81 tLNLYKYDGCESEADFEAKYGKLLWQK--DIEKYDYIAKVEPMQRALKELNASAWFTGRRRDQGSARANLPVIEIdeQNG 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 762206547  181 VFKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFG-LKRECGLH 247
Cdd:TIGR02057 159 ILKVNPLIDWTFEQVYQYLDAHNVPYNPLLDQGYRSIGDYHSTRKVKEGEDERAGRWKGkLKTECGIH 226
cysH TIGR00434
phosophoadenylyl-sulfate reductase (thioredoxin); This enzyme, involved in the assimilation of ...
38-248 4.98e-101

phosophoadenylyl-sulfate reductase (thioredoxin); This enzyme, involved in the assimilation of inorganic sulfate, is designated cysH in Bacteria and MET16 in Saccharomyces cerevisiae. Synonyms include phosphoadenosine phosphosulfate reductase, PAPS reductase, and PAPS reductase, thioredoxin-dependent. In a reaction requiring reduced thioredoxin and NADPH, it converts 3(prime)-phosphoadenylylsulfate (PAPS) to sulfite and adenosine 3(prime),5(prime) diphosphate (PAP). A related family of plant enzymes, scoring below the trusted cutoff, differs in having a thioredoxin-like C-terminal domain, not requiring thioredoxin, and in having a preference for 5(prime)-adenylylsulfate (APS) over PAPS. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 129526  Cd Length: 212  Bit Score: 293.23  E-value: 4.98e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   38 AQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESANW 117
Cdd:TIGR00434   1 AQEIIAWAYVTFGGHLVYSTSFGIQGAVLLDLVSKISPDIPVIFLDTGYHFPETYELIDELTERYPLNIKVYKPDLSLAE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  118 QEARYG-KLWEQgieGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSIQ--NGVFKFLPVVDWSNKD 194
Cdd:TIGR00434  81 QAAKYGdKLWEQ---DPNKYDYLRKVEPMHRALKELHASAWFTGLRRDQGPSRANLSILNIDekFGILKVLPLIDWTWKD 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 762206547  195 VHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFG-LKRECGLHE 248
Cdd:TIGR00434 158 VYQYIDAHNLPYNPLHDQGYPSIGDYHSTRPVKEGEDERAGRWKGkAKTECGLHE 212
CysD COG0175
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or ...
25-246 6.49e-91

3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme [Amino acid transport and metabolism, Coenzyme transport and metabolism]; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439945 [Multi-domain]  Cd Length: 232  Bit Score: 268.25  E-value: 6.49e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  25 RLAEINVELEmLSAQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNL 104
Cdd:COG0175    9 LLEELNAELE-AEAIEILREAAAEFGGRVVVSSSGGKDSTVLLHLAAKFKPPIPVLFLDTGYEFPETYEFRDRLAERLGL 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 105 NLKVYRANESANWQEARYG-KLWEQgieGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSI--QNGV 181
Cdd:COG0175   88 DLIVVRPEDAFAEQLAEFGpPLFYR---DPRWCCKIRKVEPLKRALAGYDFDAWITGLRRDESPTRAKEPVVEWdpVGGL 164
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 762206547 182 FKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETRFFGL---KRECGL 246
Cdd:COG0175  165 IKVNPLADWTELDVWAYIRREDLPYNPLYDQGYPSIGCAPCTRAVESGEDERAGRWWDEekeRKECGL 232
PAPS_reductase cd23945
Phosphoadenylyl-sulfate reductase (thioredoxin); Phosphoadenosine phosphosulfate (PAPS) ...
38-218 2.08e-85

Phosphoadenylyl-sulfate reductase (thioredoxin); Phosphoadenosine phosphosulfate (PAPS) reductase (or PAPS sulfotransferase EC 1.8.4.8) is part of the adenine nucleotide alpha hydrolase superfamily that also includes N-type ATP PPases and ATP sulfurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP).


Pssm-ID: 467510 [Multi-domain]  Cd Length: 183  Bit Score: 252.13  E-value: 2.08e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  38 AQERVAWALQNLEGAHAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESANW 117
Cdd:cd23945    1 PLEILLWAAEEFGPKLVFATSFGAEDAVILDLLSKVRPDIPVVFLDTGYLFPETYDLIDEVEARYGLNIEVYFPEGTEAE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 118 QEARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPI--LSIQNGVFKFLPVVDWSNKDV 195
Cdd:cd23945   81 EEALEGGLNEFYLEDEERYDCCRKRKPFPLALALLGVKAWITGRRRDQSPTRANLPIveVDEEGGLVKINPLADWTWEDV 160
                        170       180
                 ....*....|....*....|...
gi 762206547 196 HYYLKEHGLSYHPLWEQGYLSVG 218
Cdd:cd23945  161 WAYIREHDLPYNPLHDQGYPSIG 183
PAPS_reduct pfam01507
Phosphoadenosine phosphosulfate reductase family; This domain is found in phosphoadenosine ...
53-225 2.54e-68

Phosphoadenosine phosphosulfate reductase family; This domain is found in phosphoadenosine phosphosulfate (PAPS) reductase enzymes or PAPS sulfotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP). It is also found in NodP nodulation protein P from Rhizobium which has ATP sulfurylase activity (sulfate adenylate transferase).


Pssm-ID: 396201 [Multi-domain]  Cd Length: 173  Bit Score: 208.69  E-value: 2.54e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   53 HAVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESANWQEARYGKLWEQGieg 132
Cdd:pfam01507   2 LVVSFSGGKDSLVLLHLASKAFPPGPVIFIDTGYEFPETYEFVDELEEKYGLNLKVYLPEDSFAEGINPEGIPSSLY--- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  133 iEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSIQNG---VFKFLPVVDWSNKDVHYYLKEHGLSYHPL 209
Cdd:pfam01507  79 -RRCCRLRKVEPLKRALKELGFDAWFTGLRRDESPSRAKLPIVSIDGDfpkVIKVFPLLNWTETDVWQYILANNVPYNPL 157
                         170
                  ....*....|....*.
gi 762206547  210 WEQGYLSVGDTHTTQK 225
Cdd:pfam01507 158 YDQGYRSIGCYPCTGP 173
PAPS_reductase-like_YbdN cd23947
uncharacterized phosphoadenosine phosphosulfate reductase-like proteins, similar to ...
38-214 5.75e-19

uncharacterized phosphoadenosine phosphosulfate reductase-like proteins, similar to Escherichia coli YbdN; This subgroup contains Escherichia coli YbdN and other phosphoadenosine phosphosulfate (PAPS) reductase (or PAPS sulfotransferase EC 1.8.4.8)-like proteins. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N-type ATP PPases and ATP sulfurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP).


Pssm-ID: 467512 [Multi-domain]  Cd Length: 206  Bit Score: 82.05  E-value: 5.75e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  38 AQERVAWALQNLEgAHAVSSSFGIQAAVMLHL----LSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANE 113
Cdd:cd23947    1 ALERIRKVFEEFD-PVIVSFSGGKDSLVLLHLaleaLRRLRKDVYVVFIDTGIEFPETIDFVEKLAETLGLDVEAARPPL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 114 SANWqEARYGKLWEQGIEGIE----KYNKLN---KVEPMRRALNEL---NVKTWFsGLRREQSQSRAGLPIL-------- 175
Cdd:cd23947   80 FLEW-LTSNFQPQWDPIWDNPppprDYRWCCdelKLEPFTKWLKEKkpeGVLLLV-GIRADESLNRAKRPRVyrkygwrn 157
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 762206547 176 SIQNGVFKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGY 214
Cdd:cd23947  158 STLPGQIVAYPIKDWSVEDVWLYILRHGLPYNPLYDLGF 196
APS_reduc TIGR00424
5'-adenylylsulfate reductase, thioredoxin-independent; This enzyme, involved in the ...
26-256 8.36e-19

5'-adenylylsulfate reductase, thioredoxin-independent; This enzyme, involved in the assimilation of inorganic sulfate, is closely related to the thioredoxin-dependent PAPS reductase of Bacteria (CysH) and Saccharomyces cerevisiae. However, it has its own C-terminal thioredoxin-like domain and is not thioredoxin-dependent. Also, it has a substrate preference for 5'-adenylylsulfate (APS) over 3'-phosphoadenylylsulfate (PAPS) so the pathway does not require an APS kinase (CysC) to convert APS to PAPS. Arabidopsis thaliana appears to have three isozymes, all able to complement E. coli CysH mutants (even in backgrounds lacking thioredoxin or APS kinase) but likely localized to different compartments in Arabidopsis. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 273072 [Multi-domain]  Cd Length: 463  Bit Score: 85.07  E-value: 8.36e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   26 LAEINVELEMLSAQ--ERVAWALQN---LEGAHAVSSSFGIQAAVML------------HLLSKQqadIPVILTDTGYLF 88
Cdd:TIGR00424  76 TVAPEVEEKVVEVEdfEKLAKKLENaspLEIMDKALEKFGNDIAIAFsgaedvalieyaHLTGRP---FRVFSLDTGRLN 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547   89 PETYQFIDELTKSLNLNLKvYRANESANWQE-ARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELnvKTWFSGLRREQSQ 167
Cdd:TIGR00424 153 PETYRFFDAVEKQYGIRIE-YMFPDAVEVQAlVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGL--KAWITGQRKDQSP 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  168 -SRAGLPILSIQ-------NGV---FKFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPGMSEEETR 236
Cdd:TIGR00424 230 gTRSEIPVVQVDpvfegldGGVgslVKWNPVANVEGKDVWNFLRTMDVPVNTLHAQGYVSIGCEPCTRPVLPGQHEREGR 309
                         250       260
                  ....*....|....*....|....*.
gi 762206547  237 FF---GLKRECGLHE---EDNEQDGS 256
Cdd:TIGR00424 310 WWwedAKAKECGLHKgniKEETLDGA 335
PLN02309 PLN02309
5'-adenylylsulfate reductase
83-257 5.99e-17

5'-adenylylsulfate reductase


Pssm-ID: 215175 [Multi-domain]  Cd Length: 457  Bit Score: 79.83  E-value: 5.99e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  83 DTGYLFPETYQFIDELTKSLNLNLKvYRANESANWQE-ARYGKLWEQGIEGIEKYNKLNKVEPMRRALNELnvKTWFSGL 161
Cdd:PLN02309 142 DTGRLNPETYRLFDAVEKHYGIRIE-YMFPDAVEVQAlVRNKGLFSFYEDGHQECCRVRKVRPLRRALKGL--RAWITGQ 218
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 162 RREQSQ-SRAGLPILSIqNGVF-----------KFLPVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQKWEPG 229
Cdd:PLN02309 219 RKDQSPgTRAEVPVVQV-DPVFegldggpgslvKWNPLANVTGNEVWNFLRTMDVPVNSLHAQGYVSIGCEPCTRPVLPG 297
                        170       180       190
                 ....*....|....*....|....*....|.
gi 762206547 230 MSEEETRFF---GLKRECGLHEEDNEQDGSG 257
Cdd:PLN02309 298 QHEREGRWWwedAKAKECGLHKGNIKEEDNG 328
PRK13794 PRK13794
hypothetical protein; Provisional
64-218 2.37e-11

hypothetical protein; Provisional


Pssm-ID: 237509 [Multi-domain]  Cd Length: 479  Bit Score: 63.15  E-value: 2.37e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  64 AVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESanWQearygKLWEQGIEGIEKY--NKLNK 141
Cdd:PRK13794 262 ATLLLALKALGINFPVLFNDTGLEFPETLENVEDVEKHYGLEIIRTKSEEF--WE-----KLEEYGPPARDNRwcSEVCK 334
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 142 VEPMRRALNElnvkTW------FSGLRREQSQSRAGLP-----------ILSiqngvfkfLPVVDWSNKDVHYYLKEHGL 204
Cdd:PRK13794 335 LEPLGKLIDE----KYegeclsFVGQRKYESFNRSKKPriwrnpyikkqILA--------APILHWTAMHVWIYLFREKA 402
                        170
                 ....*....|....
gi 762206547 205 SYHPLWEQGYLSVG 218
Cdd:PRK13794 403 PYNKLYEQGFDRIG 416
Sulfate_adenylyltransferase_2 cd23946
Sulfate adenylyltransferase subunit 2; Sulfate adenylyltransferase subunits 1 and 2 form ATP ...
58-179 3.26e-11

Sulfate adenylyltransferase subunit 2; Sulfate adenylyltransferase subunits 1 and 2 form ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in the sulfur assimilation pathway. APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN, coupled to ATP hydrolysis by CysD. CysD belongs to the ATP pyrophosphatase (ATP PPase) family of proteins, members of which include PAPS reductase, GMP synthetase, asparagine synthetase, and NAD(+) synthetase. This subunit is responsible for directly forming APS under control of the G protein. A modified version of the P loop (PP-loop), the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues.


Pssm-ID: 467511  Cd Length: 214  Bit Score: 60.97  E-value: 3.26e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  58 SFGIQAAVMLHLLSKQ----QADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRanesaNWqearygKLWEQGI--- 130
Cdd:cd23946   28 SIGKDSSVMLHLARKAfypgKPPFPLLHVDTTWKFREMIEFRDRVAKEYGLDLIVHV-----NP------DGVEAGInpf 96
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 762206547 131 -EGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSIQN 179
Cdd:cd23946   97 tHGSAKHTDIMKTEGLKQALDKYGFDAAFGGARRDEEKSRAKERVYSFRD 146
PRK13795 PRK13795
hypothetical protein; Provisional
54-218 9.47e-11

hypothetical protein; Provisional


Pssm-ID: 237510 [Multi-domain]  Cd Length: 636  Bit Score: 61.55  E-value: 9.47e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  54 AVSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESanwqearygkLWEQgiegI 133
Cdd:PRK13795 247 SVSFSGGKDSLVVLDLAREALKDFKAFFNNTGLEFPETVENVKEVAEEYGIELIEADAGDA----------FWRA----V 312
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 134 EKYN----------KLNKVEPMRRALNELNVKTW--FSGLRREQSQSRAGLPILSiQN-------GVFkflPVVDWSNKD 194
Cdd:PRK13795 313 EKFGppardyrwccKVCKLGPITRAIKENFPKGCltFVGQRKYESFSRAKSPRVW-RNpwvpnqiGAS---PIQDWTALE 388
                        170       180
                 ....*....|....*....|....
gi 762206547 195 VHYYLKEHGLSYHPLWEQGYLSVG 218
Cdd:PRK13795 389 VWLYIFWRKLPYNPLYERGFDRIG 412
PRK08557 PRK08557
hypothetical protein; Provisional
55-218 3.51e-10

hypothetical protein; Provisional


Pssm-ID: 181465 [Multi-domain]  Cd Length: 417  Bit Score: 59.38  E-value: 3.51e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  55 VSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESanWQEarygkLWEQGIEGIE 134
Cdd:PRK08557 186 ASFSGGKDSSVSTLLAKEVIPDLEVIFIDTGLEYPETINYVKDFAKKYDLNLDTLDGDNF--WEN-----LEKEGIPTKD 258
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 135 KY--NKLNKVEPMRRALNELN----VKTwFSGLRREQSQSRAGLP------ILSIQNGVFkflPVVDWSNKDVHYYLKEH 202
Cdd:PRK08557 259 NRwcNSACKLMPLKEYLKKKYgnkkVLT-IDGSRKYESFTRANLDyerksgFIDFQTNVF---PILDWNSLDIWSYIYLN 334
                        170
                 ....*....|....*.
gi 762206547 203 GLSYHPLWEQGYLSVG 218
Cdd:PRK08557 335 DILYNPLYDKGFERIG 350
FAD_synthase cd23948
FAD synthase; FAD synthase (FMN:ATP adenylyl transferase (FMNAT); FAD pyrophosphorylase; ...
41-225 1.15e-07

FAD synthase; FAD synthase (FMN:ATP adenylyl transferase (FMNAT); FAD pyrophosphorylase; Flavin adenine dinucleotide synthase (FADS); EC 2.7.7.2) is involved in the biochemical pathway for converting riboflavin into FAD. By sequence comparison, bacterial and eukaryotic FMNAT enzymes belong to two different protein superfamilies and apparently utilize different sets of active-site residues to accomplish the same chemistry. This subfamily includes eukaryotic FMNATs, which are members of the 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase-like family belonging to the adenine nucleotide alpha hydrolase superfamily, which has conserved motifs different from those of nucleotidylyl transferases.


Pssm-ID: 467513 [Multi-domain]  Cd Length: 179  Bit Score: 50.21  E-value: 1.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  41 RVAWALQNLEGA------HAVSSSF--GIQAAVMLHLL--------SKQQADIPVILTDTGYLFPETYQFIDELTKSLNL 104
Cdd:cd23948    1 KVKSALEVIEEAldkygpEEIAISFngGKDCTVLLHLLraalkrkyPSPLTPLKALYIKSPDPFPEVEEFVEDTAKRYNL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 105 NLKVYRanesanwqearygklweqgiegiekynklnkvEPMRRALNEL-----NVKTWFSGLRR---------EQSQSRA 170
Cdd:cd23948   81 DLITID--------------------------------GPMKEGLEELlkehpIIKAVFMGTRRtdphgenlkPFSPTDP 128
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 762206547 171 GLPilsiqngvfKFL---PVVDWSNKDVHYYLKEHGLSYHPLWEQGYLSVGDTHTTQK 225
Cdd:cd23948  129 GWP---------QFMrvnPILDWSYHDVWEFLRTLNLPYCSLYDQGYTSLGSVDNTLP 177
PRK08576 PRK08576
hypothetical protein; Provisional
25-218 2.84e-07

hypothetical protein; Provisional


Pssm-ID: 236300 [Multi-domain]  Cd Length: 438  Bit Score: 50.85  E-value: 2.84e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  25 RLAEINVELemLSAQERVAWA-LQNLEGAHA-VSSSFGIQAAVMLHLLSKQQADIPVILTDTGYLFPETYQFIDELTKSL 102
Cdd:PRK08576 209 KLIEANREV--LEAFEKASIKfLRKFEEWTViVPWSGGKDSTAALLLAKKAFGDVTAVYVDTGYEMPLTDEYVEKVAEKL 286
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547 103 NLNLkvYRANESANWQearygklweqgiegIEKY----------NKLnKVEPMRRALNELNVKTWFSGLRREQSQSRAGL 172
Cdd:PRK08576 287 GVDL--IRAGVDVPMP--------------IEKYgmpthsnrwcTKL-KVEALEEAIRELEDGLLVVGDRDGESARRRLR 349
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 762206547 173 PILSIQNGVFKFLPVVD----WSNKDVHYYLKEHGLSYHPLWEQGYLSVG 218
Cdd:PRK08576 350 PPVVERKTNFGKILVVMpikfWSGAMVQLYILMNGLELNPLYYKGFYRLG 399
PRK12563 PRK12563
sulfate adenylyltransferase subunit CysD;
58-178 4.03e-07

sulfate adenylyltransferase subunit CysD;


Pssm-ID: 237138  Cd Length: 312  Bit Score: 50.17  E-value: 4.03e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  58 SFGIQAAVMLHLLSKQ----QADIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRANESAnwqearygklwEQGI--- 130
Cdd:PRK12563  45 SIGKDSVVMLHLAMKAfrptRPPFPLLHVDTTWKFREMIDFRDRRAKELGLDLVVHHNPDGI-----------ARGIvpf 113
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 762206547 131 -EGIEKYNKLNKVEPMRRALNELNVKTWFSGLRREQSQSRAGLPILSIQ 178
Cdd:PRK12563 114 rHGSALHTDVAKTQGLKQALDHHGFDAAIGGARRDEEKSRAKERIFSFR 162
PRK05253 PRK05253
sulfate adenylyltransferase subunit CysD;
64-170 4.67e-07

sulfate adenylyltransferase subunit CysD;


Pssm-ID: 235375  Cd Length: 301  Bit Score: 49.75  E-value: 4.67e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 762206547  64 AVMLHLLSKqqA------DIPVILTDTGYLFPETYQFIDELTKSLNLNLKVYRanesaNWQEARYGKLWEQGieGIEKYN 137
Cdd:PRK05253  41 SVMLHLARK--AfypgklPFPLLHVDTGWKFPEMIEFRDRRAKELGLELIVHS-----NPEGIARGINPFRH--GSAKHT 111
                         90       100       110
                 ....*....|....*....|....*....|...
gi 762206547 138 KLNKVEPMRRALNELNVKTWFSGLRREQSQSRA 170
Cdd:PRK05253 112 NAMKTEGLKQALEKYGFDAAFGGARRDEEKSRA 144
AANH-like cd01986
adenine nucleotide alpha hydrolase (AANH)-like proteins; This group of adenine nucleotide ...
53-98 3.15e-04

adenine nucleotide alpha hydrolase (AANH)-like proteins; This group of adenine nucleotide alpha hydrolase (AANH)-like proteins includes N-type ATP PPases and ATP sulfurylases. The domain forms an alpha/beta/alpha fold which binds to adenosine nucleotide.


Pssm-ID: 467490 [Multi-domain]  Cd Length: 74  Bit Score: 38.20  E-value: 3.15e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 762206547  53 HAVSSSFGIQAAVMLHLLSKQQADIPVILT--DTGYLFPETYQFIDEL 98
Cdd:cd01986    1 VVVGYSGGKDSSVALHLASRLGRKAEVAVVhiDHGIGFKEEAESVASI 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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