|
Name |
Accession |
Description |
Interval |
E-value |
| PTS-IIBC-alpha |
TIGR02005 |
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused ... |
2-524 |
0e+00 |
|
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273925 [Multi-domain] Cd Length: 524 Bit Score: 842.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 2 LSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEaLTAPDHLFAQIVHIIEEGGWAVFRNMPLIFAVGLPIGLAK 81
Cdd:TIGR02005 1 MNAIQRFGGAMFVPVLLFAFAGIVVGFAILFKNPDIMGS-LADQNTFWYKFWSVIEEGGWTVFRQMPLIFVVGLPIGLAK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 82 QAQGRACLAVLISFLTWNYFINAMGMTWGHFFGVDFSAEP-TAGSGLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFDK 160
Cdd:TIGR02005 80 KAQGRACLAALMGYLTFNYFINAILTQWGSSFGVNFTQGVgVGVSGLTSIAGIKTLDTSIIGAIIISGIITYIHNRFFDK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 161 PLPVFLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFVYGPFI 240
Cdd:TIGR02005 160 RLPVFLGIFQGTTFVVTIAFFVMLPCAAITCLVWPKVQMGIGSLQAFLISSGYIGVWLYTFLERILIPTGLHHFIYGPFI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 241 FGPAAVEGGIQVYWAQHLQAFSQSTLPLKTLFPEGGFALHGNSKVFGSVGIAFAIWYTASPENRVKVAGLLVPATLTAVL 320
Cdd:TIGR02005 240 FGPAVVNHGIQAYWAQHLNEFAKSTKPLKELFPYGGFALHGNSKVFGCLGIALAMYATAPPENRKKVAGLLIPATLTAVV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 321 VGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVGNMGGGLLDQFLPqNWIPMFHNHASTVFTQIGIGVCFTGIY 400
Cdd:TIGR02005 320 VGITEPLEFTFLFIAPYLFVVHAVLAASMATVMYAFGVVGNMGGGLIDFIAT-NWLPLFKNHWGTYVTQIIIGLCFTAIY 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 401 FVVFKTLIERLNLKTPGRE--ESEIKLYSKADYKAARGQTTAPAAASQQVGQAAGFLQALGGAANIESINNCATRLRIAL 478
Cdd:TIGR02005 399 FLVFRFLILKFNIPTPGREdtEEEVKLYSKADYKAKKGDSVESKRASSGNDKAAYFLQALGGKENIKDVTNCATRLRISV 478
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 757160253 479 VDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLM 524
Cdd:TIGR02005 479 KDESKVLDDEVFKKAGAHGVVRSGKAIQVIVGLSVPQVREAFEQLV 524
|
|
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
3-510 |
8.20e-72 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 236.92 E-value: 8.20e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 3 SQIQRFGGAMFTPVLLFPFAGIVVGiaimlrnplfVGEALTApdHLFAQIVHIIEEGGWAVFRNMPLIFAVGLPIGLAKQ 82
Cdd:PRK11089 7 ANLQKVGKSLMLPVSVLPIAGILLG----------VGSANFS--WLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 83 aQGRACLAVLISfltwnYFINAMGMTwghffgvdFSAEPTAGSGLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFDKPL 162
Cdd:PRK11089 75 -DGVSALAAVVA-----YGIMVKTMA--------VVAPLVLHLPAEEIAAKHLADTGVLGGIIAGAIAAYMFNRFYRIKL 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 163 PVFLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVQMGIESLQ---AFLRSAGALGVwvYTFLERILIPTGLHHFVYGPF 239
Cdd:PRK11089 141 PEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSqwaAYQNPVVAFGI--YGFVERSLVPFGLHHIWNVPF 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 240 IF--------GPAAVEGGIQVYWAQHLQAFSQStlplktlfpeGGFALhgnsKVFGSVGIAFAIWYTASPENRVKVAGLL 311
Cdd:PRK11089 219 QMqigeytnaAGQVFHGDIPRYMAGDPTAGKLS----------GGFLF----KMYGLPAAAIAIWHSAKPENRAKVGGIM 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 312 VPATLTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVG--NMGGGLLDqFLPQNwipmfhNHASTVFTQ 389
Cdd:PRK11089 285 ISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDgtSFSHGLID-FIVLS------GNSSKLWLF 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 390 IGIGVCFTGIYFVVFKTLIERLNLKTPGREESeiklyskadykaargqtTAPAAASQQVGQAAGFLQALGGAANIESINN 469
Cdd:PRK11089 358 PIVGIGYAIVYYTIFRVLIKALDLKTPGREDE-----------------TEDAKATGTSEMAPALVAAFGGKENITNLDA 420
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 757160253 470 CATRLRIALVDMAKTQSDDVfKALGAHGVVRRGNGIQVIVG 510
Cdd:PRK11089 421 CITRLRVSVADVSKVDQAGL-KKLGAAGVVVAGSGVQAIFG 460
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
1-526 |
6.86e-71 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 234.07 E-value: 6.86e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 1 MLSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEAltapdHLFAQIVHIIEEGGWAVFRNMPLIFAVGLPIGLA 80
Cdd:COG1263 8 LFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEG-----SFLSGTYQILNAAGDAVFYFLPLLFAIGAAKGFG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 81 kqaqGRACLAVLISFLTWNYFINAMGmtwghffgvdfsaepTAGSGLAMIAGIKTL---DTSIIGAIvISGIVTAIHNRY 157
Cdd:COG1263 83 ----GNPALAAVIGYLLVHPTLLNAY---------------AVAGGYISFLGIPTLigyQGGVFPGI-LAGWLAAYLEKF 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 158 FDKPLPVFLGIFqgssFVVILAFFVMIPCAwLTLLG--WPKVQMGI-ESLQAFLRSAGALGVWVYTFLERILIPTGLHHF 234
Cdd:COG1263 143 LKKKLPDALGFF----FVPILTLLIMVPLA-LLVIGpiWPPIGNGIaAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 235 VYGPFIFgPAAVEGGIqvywaqhlqafsqstlplktlfpeGGFALHGnSKVFGSVGIAFAIWYTASPenRVKVAGLLVPA 314
Cdd:COG1263 218 LNPIFWF-LLGGTGDD------------------------GLFPILA-AAMFGQPGAALAVYLKAKP--NKKVKGLAISA 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 315 TLTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVGNM--GGGLLDqflpqnwIPMFHNHASTVFTQIGI 392
Cdd:COG1263 270 ALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFSfgVGGLID-------FPSILNPGATNLLLYLI 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 393 GVCFTGIYFVVFKTLIERlnlktpGREESEIKLYSKADYKAARGQTTAPAAasqqvgqaagflqalGGAANIESINNCAT 472
Cdd:COG1263 343 GLVIAFVYYFVFTFLIGR------EDEEEEEKLATKADAKKEEAEAAAAAL---------------GGGGGLLLLEADIT 401
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 757160253 473 RLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLMKT 526
Cdd:COG1263 402 VLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIIILV 455
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
9-347 |
8.56e-51 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 176.38 E-value: 8.56e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 9 GGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEALTAPDHLFAqivHIIEEGGWAVFRNMPLIFAVGLPIGLAkQAQGRAC 88
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNLPNDTTGLPAGGFTGDSPLA---EILKQAGSAAFGILPILFAIGIAYGLA-GGDGVAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 89 LAVLISFLTWNYFInamgmtwghffGVDFSAEPTAGSGLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFD---KPLPVF 165
Cdd:pfam02378 77 AAGLIGLLSFNLAA-----------AISVALTAAGLSGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKnitIKLPDS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 166 LGIFQGSSFVVIL-AFFVMIPCAWLTLLGWPKVQMGIESLQAFLRSAG-ALGVWVYTFLERILIPTGLHHFVYGPFIF-- 241
Cdd:pfam02378 146 LPFFVGKRFVPIItGFVTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGgILGGLIFGFLERLLWPFGLHGAFIAIFWFlp 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 242 -GPAAVEGGIQVYWAqhlqafsqstlplktlfpEGGFALHGN-SKVFGSVGIAFAIWYTASPENRVKVAGLLVPATLTAV 319
Cdd:pfam02378 226 iGGSNPIANQQAYGA------------------GAAHILTGGfDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPF 287
|
330 340
....*....|....*....|....*...
gi 757160253 320 LVGITEPLEFTFLFISPLLFAVHAVLAA 347
Cdd:pfam02378 288 LFGITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
450-524 |
2.74e-24 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 96.45 E-value: 2.74e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 757160253 450 QAAGFLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQV-RDQLESLM 524
Cdd:cd00212 3 LAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVADVyKEAIKLLG 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTS-IIBC-alpha |
TIGR02005 |
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused ... |
2-524 |
0e+00 |
|
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273925 [Multi-domain] Cd Length: 524 Bit Score: 842.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 2 LSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEaLTAPDHLFAQIVHIIEEGGWAVFRNMPLIFAVGLPIGLAK 81
Cdd:TIGR02005 1 MNAIQRFGGAMFVPVLLFAFAGIVVGFAILFKNPDIMGS-LADQNTFWYKFWSVIEEGGWTVFRQMPLIFVVGLPIGLAK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 82 QAQGRACLAVLISFLTWNYFINAMGMTWGHFFGVDFSAEP-TAGSGLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFDK 160
Cdd:TIGR02005 80 KAQGRACLAALMGYLTFNYFINAILTQWGSSFGVNFTQGVgVGVSGLTSIAGIKTLDTSIIGAIIISGIITYIHNRFFDK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 161 PLPVFLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFVYGPFI 240
Cdd:TIGR02005 160 RLPVFLGIFQGTTFVVTIAFFVMLPCAAITCLVWPKVQMGIGSLQAFLISSGYIGVWLYTFLERILIPTGLHHFIYGPFI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 241 FGPAAVEGGIQVYWAQHLQAFSQSTLPLKTLFPEGGFALHGNSKVFGSVGIAFAIWYTASPENRVKVAGLLVPATLTAVL 320
Cdd:TIGR02005 240 FGPAVVNHGIQAYWAQHLNEFAKSTKPLKELFPYGGFALHGNSKVFGCLGIALAMYATAPPENRKKVAGLLIPATLTAVV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 321 VGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVGNMGGGLLDQFLPqNWIPMFHNHASTVFTQIGIGVCFTGIY 400
Cdd:TIGR02005 320 VGITEPLEFTFLFIAPYLFVVHAVLAASMATVMYAFGVVGNMGGGLIDFIAT-NWLPLFKNHWGTYVTQIIIGLCFTAIY 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 401 FVVFKTLIERLNLKTPGRE--ESEIKLYSKADYKAARGQTTAPAAASQQVGQAAGFLQALGGAANIESINNCATRLRIAL 478
Cdd:TIGR02005 399 FLVFRFLILKFNIPTPGREdtEEEVKLYSKADYKAKKGDSVESKRASSGNDKAAYFLQALGGKENIKDVTNCATRLRISV 478
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 757160253 479 VDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLM 524
Cdd:TIGR02005 479 KDESKVLDDEVFKKAGAHGVVRSGKAIQVIVGLSVPQVREAFEQLV 524
|
|
| pts-Glc |
TIGR00852 |
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ... |
60-358 |
8.77e-83 |
|
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273299 Cd Length: 289 Bit Score: 259.56 E-value: 8.77e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 60 GWAVFRNMPLIFAVGLPIGLAKQAQGRACLAVLISFLTWNYFINAMGMTWGHFFGVDFSAEPtagsglamiagiktlDTS 139
Cdd:TIGR00852 1 GSAAFFFLPLLFAIGAAKGFGGNPYLGAALAGILVHPVLNNAMGVGAQAVGNFFGFEIAKVG---------------YTG 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 140 IIGAIVISGIVTAIHNRYFDKPLPVFLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVqmGIESLQAFLRSAG-ALGVWV 218
Cdd:TIGR00852 66 VVGPIIVGAIALALHERFLDKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGRVWPPV--GISALLHWLYSAGgALGGAI 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 219 YTFLERILIPTGLHHFVYGPFIF--GPAAVEGGIQVYWAQHLQAFSQSTLPLKTLFPEGGFALHG----NSKVFGSVGIA 292
Cdd:TIGR00852 144 FGFLYRLLVPTGLHHIFYAIFIQliAGGTVIGGGQVIPGDALANMAQGGAALAVFFTAGDAKFKSiglpAAFSAGLGITE 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 757160253 293 FAIWYTASPENRVKVAGLLVPATLTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGV 358
Cdd:TIGR00852 224 PAMYGVALRERRPFVAGLIGSALLTAFLTGITEPLEFLFLFGAPGLYSIHAVLAGSIFTVAIGMGI 289
|
|
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
3-510 |
8.20e-72 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 236.92 E-value: 8.20e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 3 SQIQRFGGAMFTPVLLFPFAGIVVGiaimlrnplfVGEALTApdHLFAQIVHIIEEGGWAVFRNMPLIFAVGLPIGLAKQ 82
Cdd:PRK11089 7 ANLQKVGKSLMLPVSVLPIAGILLG----------VGSANFS--WLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 83 aQGRACLAVLISfltwnYFINAMGMTwghffgvdFSAEPTAGSGLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFDKPL 162
Cdd:PRK11089 75 -DGVSALAAVVA-----YGIMVKTMA--------VVAPLVLHLPAEEIAAKHLADTGVLGGIIAGAIAAYMFNRFYRIKL 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 163 PVFLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVQMGIESLQ---AFLRSAGALGVwvYTFLERILIPTGLHHFVYGPF 239
Cdd:PRK11089 141 PEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSqwaAYQNPVVAFGI--YGFVERSLVPFGLHHIWNVPF 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 240 IF--------GPAAVEGGIQVYWAQHLQAFSQStlplktlfpeGGFALhgnsKVFGSVGIAFAIWYTASPENRVKVAGLL 311
Cdd:PRK11089 219 QMqigeytnaAGQVFHGDIPRYMAGDPTAGKLS----------GGFLF----KMYGLPAAAIAIWHSAKPENRAKVGGIM 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 312 VPATLTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVG--NMGGGLLDqFLPQNwipmfhNHASTVFTQ 389
Cdd:PRK11089 285 ISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDgtSFSHGLID-FIVLS------GNSSKLWLF 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 390 IGIGVCFTGIYFVVFKTLIERLNLKTPGREESeiklyskadykaargqtTAPAAASQQVGQAAGFLQALGGAANIESINN 469
Cdd:PRK11089 358 PIVGIGYAIVYYTIFRVLIKALDLKTPGREDE-----------------TEDAKATGTSEMAPALVAAFGGKENITNLDA 420
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 757160253 470 CATRLRIALVDMAKTQSDDVfKALGAHGVVRRGNGIQVIVG 510
Cdd:PRK11089 421 CITRLRVSVADVSKVDQAGL-KKLGAAGVVVAGSGVQAIFG 460
|
|
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
6-527 |
8.58e-72 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 238.48 E-value: 8.58e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 6 QRFGGAMFTPVLLFPFAGIVVGIAIMLRNPLfVGEALTAPDHLFAQIVHI-IEEGGWAVFRNMPLIFAVGLPIGLAKQAQ 84
Cdd:PRK10110 16 QQLGKTFMLPVALLSFCGIMLGIGSSLSSHD-VITLIPFLGNPVLQAIFTwMSKIGSFAFSFLPVMFCIAIPLGLARENK 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 85 GRACLAVLISFLTWNYFINAMGMTWGHFFGVDFSAEPTAGsgLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFDKPLPV 164
Cdd:PRK10110 95 GVAAFAGFVGYAVMNLAVNFWLTNKGILPTTDAAVLKANN--IQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 165 FLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFVYGPFIFGPA 244
Cdd:PRK10110 173 ALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 245 A---------VEGGIQVYWAQHLQAFSQSTLPLKTLFPEGGfalHGNSKVFGSVGIAFAIWYTASPENRVKVAGLLVPAT 315
Cdd:PRK10110 253 GgtqevcgqtVSGALTIFQAQLSCPTTHGFSESATRFLSQG---KMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGV 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 316 LTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGV-VGNMGGGLLDQFLpqnwIPMFHNHASTVFTQIGIGV 394
Cdd:PRK10110 330 IACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVtIGNTDGNIIDFVV----FGILHGLSTKWYMVPVVAA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 395 CFTGIYFVVFKTLIERLNLKTPGREESEIKLYSKAdykaargqttAPAAASQQVGQAAGFLQALGGAANIESINNCATRL 474
Cdd:PRK10110 406 IWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKA----------VAGAPGKSGYNVPAILEALGGADNIVSLDNCITRL 475
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 757160253 475 RIALVDMAKTqSDDVFKALGAHGVVR-RGNGIQVIVGLHVPQVRDQLESLMKTP 527
Cdd:PRK10110 476 RLSVKDMSLV-DVQALKDNRAIGVVQlNQHNLQVVIGPQVQSVKDEMAGLMHTV 528
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
1-526 |
6.86e-71 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 234.07 E-value: 6.86e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 1 MLSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEAltapdHLFAQIVHIIEEGGWAVFRNMPLIFAVGLPIGLA 80
Cdd:COG1263 8 LFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEG-----SFLSGTYQILNAAGDAVFYFLPLLFAIGAAKGFG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 81 kqaqGRACLAVLISFLTWNYFINAMGmtwghffgvdfsaepTAGSGLAMIAGIKTL---DTSIIGAIvISGIVTAIHNRY 157
Cdd:COG1263 83 ----GNPALAAVIGYLLVHPTLLNAY---------------AVAGGYISFLGIPTLigyQGGVFPGI-LAGWLAAYLEKF 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 158 FDKPLPVFLGIFqgssFVVILAFFVMIPCAwLTLLG--WPKVQMGI-ESLQAFLRSAGALGVWVYTFLERILIPTGLHHF 234
Cdd:COG1263 143 LKKKLPDALGFF----FVPILTLLIMVPLA-LLVIGpiWPPIGNGIaAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 235 VYGPFIFgPAAVEGGIqvywaqhlqafsqstlplktlfpeGGFALHGnSKVFGSVGIAFAIWYTASPenRVKVAGLLVPA 314
Cdd:COG1263 218 LNPIFWF-LLGGTGDD------------------------GLFPILA-AAMFGQPGAALAVYLKAKP--NKKVKGLAISA 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 315 TLTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVGNM--GGGLLDqflpqnwIPMFHNHASTVFTQIGI 392
Cdd:COG1263 270 ALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFSfgVGGLID-------FPSILNPGATNLLLYLI 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 393 GVCFTGIYFVVFKTLIERlnlktpGREESEIKLYSKADYKAARGQTTAPAAasqqvgqaagflqalGGAANIESINNCAT 472
Cdd:COG1263 343 GLVIAFVYYFVFTFLIGR------EDEEEEEKLATKADAKKEEAEAAAAAL---------------GGGGGLLLLEADIT 401
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 757160253 473 RLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLMKT 526
Cdd:COG1263 402 VLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIIILV 455
|
|
| PRK09702 |
PRK09702 |
PTS sugar transporter subunit IIB; |
378-539 |
7.31e-67 |
|
PTS sugar transporter subunit IIB;
Pssm-ID: 77355 [Multi-domain] Cd Length: 161 Bit Score: 213.42 E-value: 7.31e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 378 MFHNHASTVFTQIGIGVCFTGIYFVVFKTLIERLNLKTPGREESEIKLYSKADYKAARGQTTApAAASQQVGQAAGFLQA 457
Cdd:PRK09702 1 MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTA-AEPKKELDQAAGILQA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 458 LGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLMKTPLTNEQTTLTE 537
Cdd:PRK09702 80 LGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITE 159
|
..
gi 757160253 538 AI 539
Cdd:PRK09702 160 AV 161
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
1-524 |
3.16e-52 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 188.54 E-value: 3.16e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 1 MLSQIQRFGGAMFTPVLLFPFAgivvgiAIMLRnplfvgeaLTAPDHLFaqiVHIIEEGGWAVFRNMPLIFAVGLPIGLA 80
Cdd:PRK10255 3 ILGFFQRLGRALQLPIAVLPVA------ALLLR--------FGQPDLLN---VAFIAQAGGAIFDNLALIFAIGVASSWS 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 81 KQAQGRACLAVLISfltwnYFINAMGMTwghffgvdfSAEPTAGSGLamIAGIktldtsiigaivISGIVT-AIHNRYFD 159
Cdd:PRK10255 66 KDSAGAAALAGAVG-----YFVLTKAMV---------TINPEINMGV--LAGI------------ITGLVGgAAYNRWSD 117
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 160 KPLPVFLGIFQGSSFVVILAFFVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHH------ 233
Cdd:PRK10255 118 IKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQvlntia 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 234 -FVYGPFIFGPAAV-EGGIQVYWAQHLQAfsqstlplkTLFPEGGFALhgnsKVFGSVGIAFAIWYTASPENRVKVAGLL 311
Cdd:PRK10255 198 wFQIGEFTNAAGTVfHGDINRFYAGDGTA---------GMFMSGFFPI----MMFGLPGAALAMYFAAPKERRPMVGGML 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 312 VPATLTAVLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYAFGVVG--NMGGGLLDQFLPQNWIPMFHNhastVFTQ 389
Cdd:PRK10255 265 LSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAgfSFSAGAIDYALMYNLPAASQN----VWML 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 390 IGIGVCFTGIYFVVFKTLIERLNLKTPGREESEiklyskADYKAARGQTTAPAAASQqvgQAAGFLQALGGAANIESINN 469
Cdd:PRK10255 341 LVMGVVFFAIYFVLFSAVIRMFNLKTPGREDKE------DEIVTEEANSNTEEGLTQ---LATNYIAAVGGTDNLKAIDA 411
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 757160253 470 CATRLRIALVDMAKTqSDDVFKALGAHGVVR-RGNGIQVIVGLHVPQVRDQLESLM 524
Cdd:PRK10255 412 CITRLRLTVADSARV-NDAMCKRLGASGVVKlNKQTIQVIVGAKAESIGDAMKKVV 466
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
9-347 |
8.56e-51 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 176.38 E-value: 8.56e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 9 GGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEALTAPDHLFAqivHIIEEGGWAVFRNMPLIFAVGLPIGLAkQAQGRAC 88
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNLPNDTTGLPAGGFTGDSPLA---EILKQAGSAAFGILPILFAIGIAYGLA-GGDGVAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 89 LAVLISFLTWNYFInamgmtwghffGVDFSAEPTAGSGLAMIAGIKTLDTSIIGAIVISGIVTAIHNRYFD---KPLPVF 165
Cdd:pfam02378 77 AAGLIGLLSFNLAA-----------AISVALTAAGLSGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKnitIKLPDS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 166 LGIFQGSSFVVIL-AFFVMIPCAWLTLLGWPKVQMGIESLQAFLRSAG-ALGVWVYTFLERILIPTGLHHFVYGPFIF-- 241
Cdd:pfam02378 146 LPFFVGKRFVPIItGFVTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGgILGGLIFGFLERLLWPFGLHGAFIAIFWFlp 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 242 -GPAAVEGGIQVYWAqhlqafsqstlplktlfpEGGFALHGN-SKVFGSVGIAFAIWYTASPENRVKVAGLLVPATLTAV 319
Cdd:pfam02378 226 iGGSNPIANQQAYGA------------------GAAHILTGGfDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPF 287
|
330 340
....*....|....*....|....*...
gi 757160253 320 LVGITEPLEFTFLFISPLLFAVHAVLAA 347
Cdd:pfam02378 288 LFGITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PtsG2 |
COG1264 |
Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; |
450-524 |
3.38e-26 |
|
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
Pssm-ID: 440876 [Multi-domain] Cd Length: 76 Bit Score: 101.73 E-value: 3.38e-26
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 757160253 450 QAAGFLQALGGAANIESINNCATRLRIALVDMAKTQsDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLM 524
Cdd:COG1264 3 LAKDILEALGGKENIVSVDHCATRLRVTVKDPSKVD-EAALKKLGVKGVVKNGGQVQVIIGPGVDKVADEIEKLL 76
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
450-524 |
2.74e-24 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 96.45 E-value: 2.74e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 757160253 450 QAAGFLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQV-RDQLESLM 524
Cdd:cd00212 3 LAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVADVyKEAIKLLG 78
|
|
| EIIB_glc |
TIGR00826 |
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ... |
410-510 |
7.97e-23 |
|
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273288 [Multi-domain] Cd Length: 88 Bit Score: 92.42 E-value: 7.97e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 410 RLNLKTPGREEseiklyskadykaARGQTTAPAAASQQVGQAAGFLQALGGAANIESINNCATRLRIALVDMAKTQsDDV 489
Cdd:TIGR00826 2 RLRLKTPGREK-------------ADEEAIAAGEGVKGVFTAAGQIQALGGTGNVNKVDACITRLRVGVADVSKVD-DAV 67
|
90 100
....*....|....*....|.
gi 757160253 490 FKALGAHGVVRRGNGIQVIVG 510
Cdd:TIGR00826 68 LKKLGAHGVNPLQRAVQVISG 88
|
|
| PTS_EIIB |
pfam00367 |
phosphotransferase system, EIIB; |
455-483 |
2.50e-10 |
|
phosphotransferase system, EIIB;
Pssm-ID: 459785 [Multi-domain] Cd Length: 32 Bit Score: 55.45 E-value: 2.50e-10
10 20
....*....|....*....|....*....
gi 757160253 455 LQALGGAANIESINNCATRLRIALVDMAK 483
Cdd:pfam00367 4 LEALGGKENIKSVDHCATRLRLTVKDESK 32
|
|
| PTS-II-ABC-beta |
TIGR01995 |
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS ... |
451-523 |
5.82e-09 |
|
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.
Pssm-ID: 273919 [Multi-domain] Cd Length: 610 Bit Score: 58.52 E-value: 5.82e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 757160253 451 AAGFLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESL 523
Cdd:TIGR01995 5 AKAIIENVGGKENIESVTHCATRLRFTLKDDAKADTEKLKKISGVITVVKSGGQYQVVIGNDVNDVYQALMDV 77
|
|
| PRK09796 |
PRK09796 |
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional |
442-535 |
1.66e-07 |
|
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
Pssm-ID: 182081 Cd Length: 472 Bit Score: 53.65 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 442 AAASQQVgqaagfLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLE 521
Cdd:PRK09796 6 AALARSV------IAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVV 79
|
90 100
....*....|....*....|
gi 757160253 522 SLM------KTPLTNEQTTL 535
Cdd:PRK09796 80 SLLpgdmqpAQPVGKPKLTL 99
|
|
| PRK09824 |
PRK09824 |
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional |
451-516 |
2.60e-05 |
|
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Pssm-ID: 236627 [Multi-domain] Cd Length: 627 Bit Score: 47.01 E-value: 2.60e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 757160253 451 AAGFLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQV 516
Cdd:PRK09824 7 AREIVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKNPGVIMVVESGGQFQVVIGNHVADV 72
|
|
| murP |
PRK09586 |
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed |
455-510 |
5.28e-05 |
|
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
Pssm-ID: 181971 [Multi-domain] Cd Length: 476 Bit Score: 45.82 E-value: 5.28e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 757160253 455 LQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVG 510
Cdd:PRK09586 13 LTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILSDDQVQVVLG 68
|
|
| PTS-II-BC-sucr |
TIGR01996 |
PTS system, sucrose-specific IIBC component; This model represents the fused enzyme II B and C ... |
451-538 |
2.09e-04 |
|
PTS system, sucrose-specific IIBC component; This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).
Pssm-ID: 131051 Cd Length: 461 Bit Score: 43.83 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 451 AAGFLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGL-HVPQVRDQLESLMKTPLT 529
Cdd:TIGR01996 6 AKEILELLGGKDNIVSVAHCATRLRLVLKDESKIDKKAIENLDGVKGTFFNSGQYQIIIGTgVVNKVYDEIVKLTGLSES 85
|
....*....
gi 757160253 530 NEQTTLTEA 538
Cdd:TIGR01996 86 STSEQKAEA 94
|
|
| PRK14905 |
PRK14905 |
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ... |
432-531 |
3.15e-04 |
|
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Pssm-ID: 184898 [Multi-domain] Cd Length: 355 Bit Score: 43.10 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757160253 432 KAARGQTTAPAAaSQQVGQAAGFLQALGGAANIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGl 511
Cdd:PRK14905 260 KALAGSKIDPII-HKFSEIAIQLIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIDCVKGLFSIANQYQIILG- 337
|
90 100
....*....|....*....|
gi 757160253 512 hvPQVRDQLESLMKTPLTNE 531
Cdd:PRK14905 338 --AGIVEKIHEEMKALLARE 355
|
|
| |
