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Conserved domains on  [gi|753795829|ref|WP_041551472|]
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hypothetical protein [Cellvibrio japonicus]

Protein Classification

COG3767 family protein( domain architecture ID 10007962)

COG3767 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3767 COG3767
Uncharacterized low-complexity protein [Function unknown];
2-89 3.19e-16

Uncharacterized low-complexity protein [Function unknown];


:

Pssm-ID: 442981 [Multi-domain]  Cd Length: 102  Bit Score: 68.22  E-value: 3.19e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 753795829   2 NNKPSSLSLMIGAAFATSAVLSPmASAADASFTANTLPAGYTLA---HKDGEGKCGEAKCGAENKKAEEGKCGEGKCGEG 78
Cdd:COG3767    3 KNTKKPLALALGAALAASAAASP-ASAAENPFAMQELSSGYQLAeaeKKAAEGKCGEGKCGADKKKKKEGKCGEGKCGAD 81

                         90
                 ....*....|.
gi 753795829  79 KCAGHKKSDDK 89
Cdd:COG3767   82 KKGDAKAAEGK 92
 
Name Accession Description Interval E-value
COG3767 COG3767
Uncharacterized low-complexity protein [Function unknown];
2-89 3.19e-16

Uncharacterized low-complexity protein [Function unknown];


Pssm-ID: 442981 [Multi-domain]  Cd Length: 102  Bit Score: 68.22  E-value: 3.19e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 753795829   2 NNKPSSLSLMIGAAFATSAVLSPmASAADASFTANTLPAGYTLA---HKDGEGKCGEAKCGAENKKAEEGKCGEGKCGEG 78
Cdd:COG3767    3 KNTKKPLALALGAALAASAAASP-ASAAENPFAMQELSSGYQLAeaeKKAAEGKCGEGKCGADKKKKKEGKCGEGKCGAD 81

                         90
                 ....*....|.
gi 753795829  79 KCAGHKKSDDK 89
Cdd:COG3767   82 KKGDAKAAEGK 92
 
Name Accession Description Interval E-value
COG3767 COG3767
Uncharacterized low-complexity protein [Function unknown];
2-89 3.19e-16

Uncharacterized low-complexity protein [Function unknown];


Pssm-ID: 442981 [Multi-domain]  Cd Length: 102  Bit Score: 68.22  E-value: 3.19e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 753795829   2 NNKPSSLSLMIGAAFATSAVLSPmASAADASFTANTLPAGYTLA---HKDGEGKCGEAKCGAENKKAEEGKCGEGKCGEG 78
Cdd:COG3767    3 KNTKKPLALALGAALAASAAASP-ASAAENPFAMQELSSGYQLAeaeKKAAEGKCGEGKCGADKKKKKEGKCGEGKCGAD 81

                         90
                 ....*....|.
gi 753795829  79 KCAGHKKSDDK 89
Cdd:COG3767   82 KKGDAKAAEGK 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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