|
Name |
Accession |
Description |
Interval |
E-value |
| AlaS |
COG0013 |
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA ... |
4-873 |
0e+00 |
|
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439784 [Multi-domain] Cd Length: 880 Bit Score: 1560.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 4 TTAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAGGKHNDLDNVGY 83
Cdd:COG0013 3 TSAEIRQKFLDFFESKGHTIVPSSSLVPKNDPTLLFTNAGMVQFKPYFLGQEKPPYPRATTSQKCVRTGGKHNDLENVGY 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 84 TARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGdnkgapf 163
Cdd:COG0013 83 TARHHTFFEMLGNFSFGDYFKEEAIAWAWELLTEVLGLPKERLWVTVYEDDDEAYDIWKKEIGVPEERIIRLG------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 164 ASDNFWQMGDTGPCGPCTEIFYDHGEHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERIS 243
Cdd:COG0013 156 KKDNFWEMGDTGPCGPCSEIFYDRGPEYGGGPPGSPGEDGDRYIEIWNLVFMQFNRDEDGTLTPLPKKNIDTGMGLERIA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 244 AIMQGVHSNYEIDIFQKLIAKAAEIIGV----SDLENKSLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRAVRHG 319
Cdd:COG0013 236 AVLQGVHSNYETDLFRPLIEAAAELTGVkygaDEEDDVSLRVIADHIRAVAFLIADGVLPSNEGRGYVLRRILRRAVRHG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 320 NKLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLK---GDTLDGETVFKL 396
Cdd:COG0013 316 RLLGIKEPFLYKLVPVVVEEMGDAYPELKEKQELIEKVLKAEEERFLRTLERGLKLLDEAIAKLKaagGKVLSGEDAFKL 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 397 YDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAGQFSADYNAA------LKIDTATDFCGYTELAAESKVVA 470
Cdd:COG0013 396 YDTYGFPLDLTEEIARERGLTVDEEGFEAAMEEQRERARAAAKFSGDAAVDgvwrelLEEGGPTEFVGYDTLEAEAKVLA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 471 LYRDGESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQG-IGHKGQLALGSIKVGDSLKAM 549
Cdd:COG0013 476 LVKDGELVDSAKAGEEVEVVLDRTPFYAESGGQVGDTGTIEGDGGVFEVTDTQKPPGGlIVHIGKVEEGELKVGDTVTAQ 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 550 VDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEM 629
Cdd:COG0013 556 VDAERRRAIARNHSATHLLHAALREVLGEHVTQAGSLVAPDRLRFDFSHFEALTPEELAEIEDLVNEKIRENLPVETREM 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 630 DIEEAKAKGAMALFGEKYDSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIEAVTGAAAMAYVAQQQ 709
Cdd:COG0013 636 PLDEAKALGAMALFGEKYGDEVRVVSIGDFSRELCGGTHVSRTGDIGLFKIVSESSVAAGVRRIEAVTGEAALEYLREQE 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 710 AELEEAAALLKGDVASVVAKLKAQLDKARQLEKENAQLKDKLAAAASADLAGDAQEINGVKVLVKRLEGVEAGALRGLQD 789
Cdd:COG0013 716 ALLKELAELLKAPPEELPERVEALLEELKELEKELEQLKAKLASAAADDLLAQAEEIGGVKVLAARVEGVDAKDLRDLAD 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 790 ELKQKLKSGVVLLAIGSGDKVNLIAGVTQDLTGK-VKAGELVAMVAAQVGGKGGGRPDMAQAGGSEPAKLDGALASVVPW 868
Cdd:COG0013 796 DLKDKLGSGVVVLASVADGKVSLVAGVTKDLVKKgLKAGDLVKEVAKIVGGGGGGRPDMAQAGGKDPSKLDEALAAVKEW 875
|
....*
gi 752763033 869 LNERL 873
Cdd:COG0013 876 LAEKL 880
|
|
| alaS |
TIGR00344 |
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the ... |
9-852 |
0e+00 |
|
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the reaction (tRNAala + L-alanine + ATP = L-alanyl-tRNAala + pyrophosphate + AMP). [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273026 [Multi-domain] Cd Length: 845 Bit Score: 1115.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 9 RSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAggkhNDLDNVGYTARHH 88
Cdd:TIGR00344 3 RQTFLDFFKEKGHQVIPSAPLVPRNDPTLLLTNAGMAQFKPIFTGIVKPPSNRLTNAQPCIRL----NDLENVGRTARHH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 89 TFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWnkqigvpaENIIRIGDNKGAPFASDNF 168
Cdd:TIGR00344 79 TLFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLDKERLYVTVYEDDEEAYKIW--------EKIGIPADRIIKCDAKDNF 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 169 WQMGDtGPCGPCTEIFYDHgehiWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISAIMQG 248
Cdd:TIGR00344 151 WDMGD-GPCGPCTEIYYDF----VGGKPGEPLEENDRYLEVWNLVFMQFNRDPDGNYTPLPKKNIDTGMGLERFVAVLQG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 249 VHSNYEIDIFQKLIAKAAEIIGVSDLENK-------------SLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRA 315
Cdd:TIGR00344 226 VPTNYDTDIFLPLIEKIEEITGVKYDSNNagimdekrvedlrSLRVIADHTRAIAFMLADGVVPSNEGRGYVLRRLIRRA 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 316 VRHGNKLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLKGDTLDGETVFK 395
Cdd:TIGR00344 306 LRHGKKLGLKEAFLYKLVPTLIEVLGDYYPELKEKQEFVEQILELEEERFAKTLERGLRLFEKLLKKTGKKELDGEDAFK 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 396 LYDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAGQFSADYNAALKIDTATDFCGYTELAAESKVVALYRDG 475
Cdd:TIGR00344 386 LYDTYGFPVELTKEIAEERGLTVDMPGFEALMAEQRERSKQNSQFQEQEIALVNVYPATEFLGYDDLEFEAKVIGLFDDG 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 476 ESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGSIKVGDSLKAMVDKKLR 555
Cdd:TIGR00344 466 YLVEQALAGQSVYVILDQTPFYAESGGQIGDTGYLIANDGKFRVVDVQKPNGVVFHFGEVEGGSLKVGDKVIAVIDEKRR 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 556 HRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEEAK 635
Cdd:TIGR00344 546 FRIMRNHSATHLLHAALQKVLGNHVWQAGSLVSFKKLRFDFSHFRALTREELEEIEDLANEQILANIPIKVIFMDLDEAK 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 636 AKGAMALFGEKY--DSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIEAVTGAAAMAYVAQQQAELE 713
Cdd:TIGR00344 626 RKGAFALFGEKYvpGEKVRVVSVGDFSVELCGGTHVRNTGEIGLFKIVKESGIAAGVRRIEAVTGEAAIEYLNEQEDKLK 705
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 714 EAAALLKGDVASVVAKLKAQLDKARQLEKENAQLKDKLAAAASADLAGDAQEINGVKVLVKRLEGVEAGALRGLQDELKQ 793
Cdd:TIGR00344 706 ELADILKVTPNELPKKVERFFEEWKALQKELESLKLKIADQKIDELKDKAETINGVKVLVEVVDAKDMKSLKTMADRLKS 785
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 794 KLKSGVVLLAIGSGDKVNLIAGVTQDL-TGKVKAGELVAMVAAQVGGKGGGRPDMAQAGG 852
Cdd:TIGR00344 786 KLGSAIYVLASFAEGKVKLVCGVSNDVlTKKIKAGELINQIAQVLGGKGGGRPDFAQGGG 845
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
4-863 |
0e+00 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 955.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 4 TTAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLG-----MEKRSYVRAATAQRCVRAGGKHNDL 78
Cdd:PLN02900 12 PGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGtadpnTPLRKLPRATNTQKCIRAGGKHNDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 79 DNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDD------EAFDIWNKQigVPAENI 152
Cdd:PLN02900 92 DDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEkqapddEARAIWLDY--LPEERV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 153 IRIGdnkgapfASDNFWQMGDTGPCGPCTEIFYD-HGEhiwggRPGSPEEDGD--RFIEIWNIVFMQYNRQSDGTLDPLP 229
Cdd:PLN02900 170 LPFG-------CKDNFWEMGDTGPCGPCSEIHYDrIGE-----RDAADLVNNDdpRFIEIWNLVFIQFNREADGSLKPLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 230 KPAVDTGMGIERISAIMQGVHSNYEIDIFQKLIAKAAEIIGVSDLENKS-----------LRVIADHIRSCAFLVADGVM 298
Cdd:PLN02900 238 AKHVDTGMGLERLASILQNKPSNYDTDLFMPIFDAIQEATGARPYAGKVgaedddrvdmaYRVVADHIRTLSFAIADGVV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 299 PSNEGRGYVLRRIIRRAVRHGN-KLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLD 377
Cdd:PLN02900 318 PSNEGRGYVLRRLLRRAVRYGRlLLGAEEGFFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFK 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 378 AALADLK---GDTLDGETVFKLYDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAG--------QFSADYNA 446
Cdd:PLN02900 398 KALAAAKangGPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHlkagggaiELAAEATS 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 447 ALK---IDTATDFCGYTEL-AAESKVVALYRDGESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQL-LAEGVEFNVAD 521
Cdd:PLN02900 478 WLQkqgVAATDDFLKYDWLsDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLeGSGGAVVEVSD 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 522 TQKFGQGIGHKGQLALGSIKVGDSLKAMVDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEG 601
Cdd:PLN02900 558 VQKAGGFVLHIGTVTEGSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKP 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 602 VKREELKAVEDLVNTQIRRNHELNFAEMDIEEAKA-KGAMALFGEKYDSKVRVVTMGD-FSIELCGGTHVGRTGDIGLFK 679
Cdd:PLN02900 638 MTPEELREVESLVNEWIGDALPVEAKEMPLADAKRiNGLRAVFGEKYPDPVRVVSVGGvYSMELCGGTHVSNTAEAEAFK 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 680 ITSEGGIAAGIRRIEAVTGAAAMAY----------------VAQQQAELEEAAALLKGDVASVVAKLKAQL--------D 735
Cdd:PLN02900 718 LLSEEGIAKGIRRITAVTGGAAVEAinaadslereldsalkVEGSDLEKKVASLKSRVDAAVIPAAKKEEIrarvsalqK 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 736 KARQLEKENAQLKdKLAAAASADLAGDAQEINGVKVLVKRLE-GVEAGALRGLQDELKQKLK--SGVVLLAIGSGDKVNL 812
Cdd:PLN02900 798 ELRAAQKEAAALR-AKLAVAKATELASKALSAGKSVLVARLDvGVDAAALKEAAEKVIAKLGdpAAVVLSSDEEKGKVSL 876
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|..
gi 752763033 813 IAGVTQDLTGK-VKAGELVAMVAAQVGGKGGGRPDMAQAGGSEPAKLDGALA 863
Cdd:PLN02900 877 VAAVPPGVVKKgLKAGKWLGAIAKLCGGGGGGKPGFAQGQGRDAEKLDAALE 928
|
|
| tRNA-synt_2c |
pfam01411 |
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be ... |
8-553 |
0e+00 |
|
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Pssm-ID: 279719 [Multi-domain] Cd Length: 548 Bit Score: 804.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 8 LRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGME-KRSYVRAATAQRCVRAGgkhnDLDNVGYTAR 86
Cdd:pfam01411 2 IRQTFLDFFEKKGHTRVPSSPVVPRNDPTLLFTNAGMNQFKPIFLGGVaKPPYNRATNSQKCIRAG----DLENVGRTGR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 87 HHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGDNkgapfasD 166
Cdd:pfam01411 78 HHTFFEMLGNFSFGDYFKEEAIEYAWELLTKELGLPPERLYVTVFEWDDEAGPIWEKIVGGPEERILRFGDK-------D 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 167 NFWQMGDTGPCGPCTEIFYDHGEHIWGGRPGSPEE-DGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISAI 245
Cdd:pfam01411 151 NFWEMGDTGPCGPCSEIDYDRGEEIGGWDSGGTPTaDDDRFLEIWNLVFMQFNRENDGTLKPLPKKSIDTGMGLERLVAV 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 246 MQGVHSNYEIDIFQKLIAKAAEIIGV----SDLENKSLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRAVRHGNK 321
Cdd:pfam01411 231 LQDVRSNYDTDVFIPVIELIEEISGAryytVDETDEAYRVIADHTRALTFALADGVVPSNEGRGYVLRRILRRAVRHAKK 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 322 LGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLK--GDTLDGETVFKLYDT 399
Cdd:pfam01411 311 LGLKEPFLYDLVPTVVEVLGDAYPELKEDEDFIQEILELEEERFAKTLERGLRLLERLIAKLKkgKKTLPGEDAFKLYDT 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 400 YGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAA---GQFSADYNAALKIDTATDFCGYTELAAESKVVALYRDGE 476
Cdd:pfam01411 391 YGFPVDLTKEIAEERGLKVDMPGFEYAMVEQRERSKQAvkeKGEKLDVSALKELPATTEFLGYDDLESEAKILALPKDGE 470
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 752763033 477 SVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGSIKVGDSLKAMVDKK 553
Cdd:pfam01411 471 FVAEVLAGQEGGVILDRTPFYAESGGQIGDTGYIIGDGGEFRVTDVQKYGGVVVHKGKLESGKLKVGDKVIAVIDED 547
|
|
| AlaRS_core |
cd00673 |
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is ... |
5-249 |
1.94e-131 |
|
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.
Pssm-ID: 238360 [Multi-domain] Cd Length: 232 Bit Score: 392.49 E-value: 1.94e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 5 TAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAGGKHNdldnVGYT 84
Cdd:cd00673 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVNSQKCIRAGDIDN----VGKT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 85 ARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGdnkgapfA 164
Cdd:cd00673 77 GRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKDRLYVSVFEGDDEEEAIWWWKIGLPGIRIERIG-------F 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 165 SDNFWQMGDTGPCGPCTEIFYDHGEHIWGGRpgSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISA 244
Cdd:cd00673 150 KDNFWEMGGNGPCGPCSEIFYDRGEERDAAS--LPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVW 227
|
....*
gi 752763033 245 IMQGV 249
Cdd:cd00673 228 VLQGV 232
|
|
| a_tRNA_ed_AlaXM |
NF040865 |
alanyl-tRNA editing protein AlaXM; |
489-694 |
7.21e-32 |
|
alanyl-tRNA editing protein AlaXM;
Pssm-ID: 468802 [Multi-domain] Cd Length: 234 Bit Score: 124.26 E-value: 7.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 489 VVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGsIKVGDSLKAMVDKKLRHRTELNHSVTHLL 568
Cdd:NF040865 26 VVLDRTAFYPTGGGQPHDTGTLVRDDKEFRVVDVRKEGGEIAHVVDRAPG-LKPGDKVKGEIDWDRRYRLMRYHTASHIL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 569 HAALRQVLGTHVTqkGSLVDPERLRFDFShFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEEAK-----AKGAMALF 643
Cdd:NF040865 105 SAVLYREYGALIT--GGQISPDKARVDFS-LENFDRELLEEIIEEANEIIAEGIEVKIYWLPREEALkipglVRLAKRLP 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 752763033 644 GEKydSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIE 694
Cdd:NF040865 182 PEI--EEVRIVEIEGVDIQADGGTHVKNTGEIGEIKILKRENKGKGNKRLY 230
|
|
| tRNA_SAD |
smart00863 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of ... |
651-693 |
2.25e-21 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 197931 [Multi-domain] Cd Length: 43 Bit Score: 87.44 E-value: 2.25e-21
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 752763033 651 VRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRI 693
Cdd:smart00863 1 VRVVSIGDFSVELCGGTHVPNTGEIGAFKILSVSGAYWGLQRI 43
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| AlaS |
COG0013 |
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA ... |
4-873 |
0e+00 |
|
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439784 [Multi-domain] Cd Length: 880 Bit Score: 1560.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 4 TTAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAGGKHNDLDNVGY 83
Cdd:COG0013 3 TSAEIRQKFLDFFESKGHTIVPSSSLVPKNDPTLLFTNAGMVQFKPYFLGQEKPPYPRATTSQKCVRTGGKHNDLENVGY 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 84 TARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGdnkgapf 163
Cdd:COG0013 83 TARHHTFFEMLGNFSFGDYFKEEAIAWAWELLTEVLGLPKERLWVTVYEDDDEAYDIWKKEIGVPEERIIRLG------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 164 ASDNFWQMGDTGPCGPCTEIFYDHGEHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERIS 243
Cdd:COG0013 156 KKDNFWEMGDTGPCGPCSEIFYDRGPEYGGGPPGSPGEDGDRYIEIWNLVFMQFNRDEDGTLTPLPKKNIDTGMGLERIA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 244 AIMQGVHSNYEIDIFQKLIAKAAEIIGV----SDLENKSLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRAVRHG 319
Cdd:COG0013 236 AVLQGVHSNYETDLFRPLIEAAAELTGVkygaDEEDDVSLRVIADHIRAVAFLIADGVLPSNEGRGYVLRRILRRAVRHG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 320 NKLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLK---GDTLDGETVFKL 396
Cdd:COG0013 316 RLLGIKEPFLYKLVPVVVEEMGDAYPELKEKQELIEKVLKAEEERFLRTLERGLKLLDEAIAKLKaagGKVLSGEDAFKL 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 397 YDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAGQFSADYNAA------LKIDTATDFCGYTELAAESKVVA 470
Cdd:COG0013 396 YDTYGFPLDLTEEIARERGLTVDEEGFEAAMEEQRERARAAAKFSGDAAVDgvwrelLEEGGPTEFVGYDTLEAEAKVLA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 471 LYRDGESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQG-IGHKGQLALGSIKVGDSLKAM 549
Cdd:COG0013 476 LVKDGELVDSAKAGEEVEVVLDRTPFYAESGGQVGDTGTIEGDGGVFEVTDTQKPPGGlIVHIGKVEEGELKVGDTVTAQ 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 550 VDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEM 629
Cdd:COG0013 556 VDAERRRAIARNHSATHLLHAALREVLGEHVTQAGSLVAPDRLRFDFSHFEALTPEELAEIEDLVNEKIRENLPVETREM 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 630 DIEEAKAKGAMALFGEKYDSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIEAVTGAAAMAYVAQQQ 709
Cdd:COG0013 636 PLDEAKALGAMALFGEKYGDEVRVVSIGDFSRELCGGTHVSRTGDIGLFKIVSESSVAAGVRRIEAVTGEAALEYLREQE 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 710 AELEEAAALLKGDVASVVAKLKAQLDKARQLEKENAQLKDKLAAAASADLAGDAQEINGVKVLVKRLEGVEAGALRGLQD 789
Cdd:COG0013 716 ALLKELAELLKAPPEELPERVEALLEELKELEKELEQLKAKLASAAADDLLAQAEEIGGVKVLAARVEGVDAKDLRDLAD 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 790 ELKQKLKSGVVLLAIGSGDKVNLIAGVTQDLTGK-VKAGELVAMVAAQVGGKGGGRPDMAQAGGSEPAKLDGALASVVPW 868
Cdd:COG0013 796 DLKDKLGSGVVVLASVADGKVSLVAGVTKDLVKKgLKAGDLVKEVAKIVGGGGGGRPDMAQAGGKDPSKLDEALAAVKEW 875
|
....*
gi 752763033 869 LNERL 873
Cdd:COG0013 876 LAEKL 880
|
|
| alaS |
TIGR00344 |
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the ... |
9-852 |
0e+00 |
|
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the reaction (tRNAala + L-alanine + ATP = L-alanyl-tRNAala + pyrophosphate + AMP). [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273026 [Multi-domain] Cd Length: 845 Bit Score: 1115.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 9 RSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAggkhNDLDNVGYTARHH 88
Cdd:TIGR00344 3 RQTFLDFFKEKGHQVIPSAPLVPRNDPTLLLTNAGMAQFKPIFTGIVKPPSNRLTNAQPCIRL----NDLENVGRTARHH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 89 TFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWnkqigvpaENIIRIGDNKGAPFASDNF 168
Cdd:TIGR00344 79 TLFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLDKERLYVTVYEDDEEAYKIW--------EKIGIPADRIIKCDAKDNF 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 169 WQMGDtGPCGPCTEIFYDHgehiWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISAIMQG 248
Cdd:TIGR00344 151 WDMGD-GPCGPCTEIYYDF----VGGKPGEPLEENDRYLEVWNLVFMQFNRDPDGNYTPLPKKNIDTGMGLERFVAVLQG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 249 VHSNYEIDIFQKLIAKAAEIIGVSDLENK-------------SLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRA 315
Cdd:TIGR00344 226 VPTNYDTDIFLPLIEKIEEITGVKYDSNNagimdekrvedlrSLRVIADHTRAIAFMLADGVVPSNEGRGYVLRRLIRRA 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 316 VRHGNKLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLKGDTLDGETVFK 395
Cdd:TIGR00344 306 LRHGKKLGLKEAFLYKLVPTLIEVLGDYYPELKEKQEFVEQILELEEERFAKTLERGLRLFEKLLKKTGKKELDGEDAFK 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 396 LYDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAGQFSADYNAALKIDTATDFCGYTELAAESKVVALYRDG 475
Cdd:TIGR00344 386 LYDTYGFPVELTKEIAEERGLTVDMPGFEALMAEQRERSKQNSQFQEQEIALVNVYPATEFLGYDDLEFEAKVIGLFDDG 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 476 ESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGSIKVGDSLKAMVDKKLR 555
Cdd:TIGR00344 466 YLVEQALAGQSVYVILDQTPFYAESGGQIGDTGYLIANDGKFRVVDVQKPNGVVFHFGEVEGGSLKVGDKVIAVIDEKRR 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 556 HRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEEAK 635
Cdd:TIGR00344 546 FRIMRNHSATHLLHAALQKVLGNHVWQAGSLVSFKKLRFDFSHFRALTREELEEIEDLANEQILANIPIKVIFMDLDEAK 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 636 AKGAMALFGEKY--DSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIEAVTGAAAMAYVAQQQAELE 713
Cdd:TIGR00344 626 RKGAFALFGEKYvpGEKVRVVSVGDFSVELCGGTHVRNTGEIGLFKIVKESGIAAGVRRIEAVTGEAAIEYLNEQEDKLK 705
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 714 EAAALLKGDVASVVAKLKAQLDKARQLEKENAQLKDKLAAAASADLAGDAQEINGVKVLVKRLEGVEAGALRGLQDELKQ 793
Cdd:TIGR00344 706 ELADILKVTPNELPKKVERFFEEWKALQKELESLKLKIADQKIDELKDKAETINGVKVLVEVVDAKDMKSLKTMADRLKS 785
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 794 KLKSGVVLLAIGSGDKVNLIAGVTQDL-TGKVKAGELVAMVAAQVGGKGGGRPDMAQAGG 852
Cdd:TIGR00344 786 KLGSAIYVLASFAEGKVKLVCGVSNDVlTKKIKAGELINQIAQVLGGKGGGRPDFAQGGG 845
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
4-863 |
0e+00 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 955.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 4 TTAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLG-----MEKRSYVRAATAQRCVRAGGKHNDL 78
Cdd:PLN02900 12 PGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGtadpnTPLRKLPRATNTQKCIRAGGKHNDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 79 DNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDD------EAFDIWNKQigVPAENI 152
Cdd:PLN02900 92 DDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEkqapddEARAIWLDY--LPEERV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 153 IRIGdnkgapfASDNFWQMGDTGPCGPCTEIFYD-HGEhiwggRPGSPEEDGD--RFIEIWNIVFMQYNRQSDGTLDPLP 229
Cdd:PLN02900 170 LPFG-------CKDNFWEMGDTGPCGPCSEIHYDrIGE-----RDAADLVNNDdpRFIEIWNLVFIQFNREADGSLKPLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 230 KPAVDTGMGIERISAIMQGVHSNYEIDIFQKLIAKAAEIIGVSDLENKS-----------LRVIADHIRSCAFLVADGVM 298
Cdd:PLN02900 238 AKHVDTGMGLERLASILQNKPSNYDTDLFMPIFDAIQEATGARPYAGKVgaedddrvdmaYRVVADHIRTLSFAIADGVV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 299 PSNEGRGYVLRRIIRRAVRHGN-KLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLD 377
Cdd:PLN02900 318 PSNEGRGYVLRRLLRRAVRYGRlLLGAEEGFFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFK 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 378 AALADLK---GDTLDGETVFKLYDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAG--------QFSADYNA 446
Cdd:PLN02900 398 KALAAAKangGPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHlkagggaiELAAEATS 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 447 ALK---IDTATDFCGYTEL-AAESKVVALYRDGESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQL-LAEGVEFNVAD 521
Cdd:PLN02900 478 WLQkqgVAATDDFLKYDWLsDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLeGSGGAVVEVSD 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 522 TQKFGQGIGHKGQLALGSIKVGDSLKAMVDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEG 601
Cdd:PLN02900 558 VQKAGGFVLHIGTVTEGSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKP 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 602 VKREELKAVEDLVNTQIRRNHELNFAEMDIEEAKA-KGAMALFGEKYDSKVRVVTMGD-FSIELCGGTHVGRTGDIGLFK 679
Cdd:PLN02900 638 MTPEELREVESLVNEWIGDALPVEAKEMPLADAKRiNGLRAVFGEKYPDPVRVVSVGGvYSMELCGGTHVSNTAEAEAFK 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 680 ITSEGGIAAGIRRIEAVTGAAAMAY----------------VAQQQAELEEAAALLKGDVASVVAKLKAQL--------D 735
Cdd:PLN02900 718 LLSEEGIAKGIRRITAVTGGAAVEAinaadslereldsalkVEGSDLEKKVASLKSRVDAAVIPAAKKEEIrarvsalqK 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 736 KARQLEKENAQLKdKLAAAASADLAGDAQEINGVKVLVKRLE-GVEAGALRGLQDELKQKLK--SGVVLLAIGSGDKVNL 812
Cdd:PLN02900 798 ELRAAQKEAAALR-AKLAVAKATELASKALSAGKSVLVARLDvGVDAAALKEAAEKVIAKLGdpAAVVLSSDEEKGKVSL 876
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|..
gi 752763033 813 IAGVTQDLTGK-VKAGELVAMVAAQVGGKGGGRPDMAQAGGSEPAKLDGALA 863
Cdd:PLN02900 877 VAAVPPGVVKKgLKAGKWLGAIAKLCGGGGGGKPGFAQGQGRDAEKLDAALE 928
|
|
| tRNA-synt_2c |
pfam01411 |
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be ... |
8-553 |
0e+00 |
|
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Pssm-ID: 279719 [Multi-domain] Cd Length: 548 Bit Score: 804.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 8 LRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGME-KRSYVRAATAQRCVRAGgkhnDLDNVGYTAR 86
Cdd:pfam01411 2 IRQTFLDFFEKKGHTRVPSSPVVPRNDPTLLFTNAGMNQFKPIFLGGVaKPPYNRATNSQKCIRAG----DLENVGRTGR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 87 HHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGDNkgapfasD 166
Cdd:pfam01411 78 HHTFFEMLGNFSFGDYFKEEAIEYAWELLTKELGLPPERLYVTVFEWDDEAGPIWEKIVGGPEERILRFGDK-------D 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 167 NFWQMGDTGPCGPCTEIFYDHGEHIWGGRPGSPEE-DGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISAI 245
Cdd:pfam01411 151 NFWEMGDTGPCGPCSEIDYDRGEEIGGWDSGGTPTaDDDRFLEIWNLVFMQFNRENDGTLKPLPKKSIDTGMGLERLVAV 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 246 MQGVHSNYEIDIFQKLIAKAAEIIGV----SDLENKSLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRAVRHGNK 321
Cdd:pfam01411 231 LQDVRSNYDTDVFIPVIELIEEISGAryytVDETDEAYRVIADHTRALTFALADGVVPSNEGRGYVLRRILRRAVRHAKK 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 322 LGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLK--GDTLDGETVFKLYDT 399
Cdd:pfam01411 311 LGLKEPFLYDLVPTVVEVLGDAYPELKEDEDFIQEILELEEERFAKTLERGLRLLERLIAKLKkgKKTLPGEDAFKLYDT 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 400 YGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAA---GQFSADYNAALKIDTATDFCGYTELAAESKVVALYRDGE 476
Cdd:pfam01411 391 YGFPVDLTKEIAEERGLKVDMPGFEYAMVEQRERSKQAvkeKGEKLDVSALKELPATTEFLGYDDLESEAKILALPKDGE 470
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 752763033 477 SVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGSIKVGDSLKAMVDKK 553
Cdd:pfam01411 471 FVAEVLAGQEGGVILDRTPFYAESGGQIGDTGYIIGDGGEFRVTDVQKYGGVVVHKGKLESGKLKVGDKVIAVIDED 547
|
|
| PRK01584 |
PRK01584 |
alanyl-tRNA synthetase; Provisional |
8-696 |
3.03e-178 |
|
alanyl-tRNA synthetase; Provisional
Pssm-ID: 234962 [Multi-domain] Cd Length: 594 Bit Score: 527.03 E-value: 3.03e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 8 LRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAGgkhnDLDNVGyTARH 87
Cdd:PRK01584 6 LRKKYIDFFKSKGHVEIAGKSLIPENDPTVLFTTAGMHPLVPYLLGEPHPSGTRLVDVQKCLRTG----DIDEVG-DLSH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 88 HTFFEMLGNFSFGDYFKEDAIRFAWEFLTGT--LKLPKEKLCVTVYHTDD------EAFDIWnKQIGVPAENIIRIGdnk 159
Cdd:PRK01584 81 LTFFEMLGNWSLGAYFKEESIKYSFEFLTSPdyLNIPKDKLYVTVFEGDEeiprdeETASVW-ESLGIPKDRIFYLS--- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 160 gapfASDNFW-QMGDTGPCGPCTEIFYDHGEHIWGGRPGsPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMG 238
Cdd:PRK01584 157 ----REHNWWgPVGETGPCGPDTEIFVDTGKPKCSVNCR-PTCSCGKYFEIWNNVFMQYNKDEDGNYEELKRKCVDTGMG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 239 IERISAIMQGVHSNYEIDIFQKLIAKAAEIIGV----SDLENKSLRVIADHIRSCAFLVAD--GVMPSNEGRGYVLRRII 312
Cdd:PRK01584 232 IERTIAFLQGKSSVYDTEAFTPIIKRIEKISGKiygqNEEDDRSIRIIADHIRAACFILGDpfVVLPSNVGQGYVLRRLI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 313 RRAVRHGNKLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALKAEEEQFARTLERGLGMLDAALADLKGD-TLDGE 391
Cdd:PRK01584 312 RRSIRHAKKLGIESHFLADLVDSVEEIYGSFYPELTEKKDFIKEELNKEEEKFFKTLRKGEQEFIKLIPNLGSSkIIPGD 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 392 TVFKLYDTYGFPVDLTADVCRERNLKVDEEGFNAAMAEQRSRAQAAGQfsadynaalkidtatdfcgytelaaeskvval 471
Cdd:PRK01584 392 IAFKLYDTYGFPYEITEELASEYGFTVDREGFDEHFKKHQKVSKKGAD-------------------------------- 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 472 yrdgesvdaaeagavlvvvldntpfyaesggqvgdkgqllaegvefnvadtQKFgqgighKGQLALGSikvgdslkamvd 551
Cdd:PRK01584 440 ---------------------------------------------------KVF------KGGLADHS------------ 450
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 552 kklrHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDI 631
Cdd:PRK01584 451 ----YETTKLHTATHLLHKALRLVLGDHVRQKGSNITAERLRFDFSHPEKMTDDEIKKVEDIVNLQIKNDLSVKKEVMSL 526
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 752763033 632 EEAKAKGAMALFGEKYDSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIEAV 696
Cdd:PRK01584 527 EEAREKGAMALFGEKYEDIVKVYEIDGFSKEVCGGPHVENTGELGTFKIQKEQSSSSGVRRIRAI 591
|
|
| AlaRS_core |
cd00673 |
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is ... |
5-249 |
1.94e-131 |
|
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.
Pssm-ID: 238360 [Multi-domain] Cd Length: 232 Bit Score: 392.49 E-value: 1.94e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 5 TAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQRCVRAGGKHNdldnVGYT 84
Cdd:cd00673 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVNSQKCIRAGDIDN----VGKT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 85 ARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGdnkgapfA 164
Cdd:cd00673 77 GRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKDRLYVSVFEGDDEEEAIWWWKIGLPGIRIERIG-------F 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 165 SDNFWQMGDTGPCGPCTEIFYDHGEHIWGGRpgSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISA 244
Cdd:cd00673 150 KDNFWEMGGNGPCGPCSEIFYDRGEERDAAS--LPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVW 227
|
....*
gi 752763033 245 IMQGV 249
Cdd:cd00673 228 VLQGV 232
|
|
| AlaX |
COG2872 |
Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis] ... |
464-694 |
4.44e-36 |
|
Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis];
Pssm-ID: 442119 [Multi-domain] Cd Length: 238 Bit Score: 136.48 E-value: 4.44e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 464 AESKVVALYRDGEsvdaaeagavlvVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLAlGSIKVG 543
Cdd:COG2872 15 FEATVTAVTEEGG------------VVLDRTAFYPTGGGQPGDTGTLVWDGKEIRVVDVRKEDGEIVHVLEGA-PLPEVG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 544 DSLKAMVDKKLRHRTELNHSVTHLLHAALRQVLGTHVTqkGSLVDPERLRFDFShFEGVKREELKAVEDLVNTQIRRNHE 623
Cdd:COG2872 82 DEVTGEIDWERRYRHMRLHTALHLLSAVVYREYGAPVT--GGQIGEDRARIDFD-LPEFDEEDLEEIEAEANELIAADLP 158
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 752763033 624 LNFAEMDIEEAKA-----KGAMALFGEKyDSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKIT---SEGgiaAGIRRIE 694
Cdd:COG2872 159 VRIYWITREELEAipglvRTMSVLPPPG-VGRVRIVEIGGVDLQPCGGTHVANTGEIGRIKITkieKKG---KGNRRVY 233
|
|
| a_tRNA_ed_AlaXM |
NF040865 |
alanyl-tRNA editing protein AlaXM; |
489-694 |
7.21e-32 |
|
alanyl-tRNA editing protein AlaXM;
Pssm-ID: 468802 [Multi-domain] Cd Length: 234 Bit Score: 124.26 E-value: 7.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 489 VVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGsIKVGDSLKAMVDKKLRHRTELNHSVTHLL 568
Cdd:NF040865 26 VVLDRTAFYPTGGGQPHDTGTLVRDDKEFRVVDVRKEGGEIAHVVDRAPG-LKPGDKVKGEIDWDRRYRLMRYHTASHIL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 569 HAALRQVLGTHVTqkGSLVDPERLRFDFShFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEEAK-----AKGAMALF 643
Cdd:NF040865 105 SAVLYREYGALIT--GGQISPDKARVDFS-LENFDRELLEEIIEEANEIIAEGIEVKIYWLPREEALkipglVRLAKRLP 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 752763033 644 GEKydSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIE 694
Cdd:NF040865 182 PEI--EEVRIVEIEGVDIQADGGTHVKNTGEIGEIKILKRENKGKGNKRLY 230
|
|
| DHHA1 |
pfam02272 |
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called ... |
730-869 |
6.04e-24 |
|
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members. This domains is also found in alanyl tRNA synthetase, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Pssm-ID: 396724 [Multi-domain] Cd Length: 139 Bit Score: 98.28 E-value: 6.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 730 LKAQLDKARQLEKENAQLKDKLAAAASADLAGDAQEINGVKVLVKRL-EGVEAGALRGLQDELKQKLKSGVVLLAIGS-G 807
Cdd:pfam02272 1 LESLNEELKELEKELEELKEALALLKAKELLEKAEEINGVKVLVAEVgEGWDAGALGIAADRLKKKLGDPVIVLVAKEdG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 752763033 808 DKVNLIAGVTQDltGKVKAGELVAMVAAQVGGKGGGRpDMAQAGGSEPAKLDGALASVVPWL 869
Cdd:pfam02272 81 DKVKVSARSSKD--KGVDAGELLKEVAAILGGGGGGH-DLAAGAGIDAEKLDEALELLEEAI 139
|
|
| tRNA_SAD |
smart00863 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of ... |
651-693 |
2.25e-21 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 197931 [Multi-domain] Cd Length: 43 Bit Score: 87.44 E-value: 2.25e-21
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 752763033 651 VRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRI 693
Cdd:smart00863 1 VRVVSIGDFSVELCGGTHVPNTGEIGAFKILSVSGAYWGLQRI 43
|
|
| tRNA_SAD |
pfam07973 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of ... |
651-693 |
3.19e-19 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 429764 [Multi-domain] Cd Length: 43 Bit Score: 81.34 E-value: 3.19e-19
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 752763033 651 VRVVTMGDFSIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRI 693
Cdd:pfam07973 1 VRVVSIGDFDVDLCGGTHVPNTGEIGAFKILKGESKNKGLRRI 43
|
|
| PLN02961 |
PLN02961 |
alanine-tRNA ligase |
487-681 |
6.88e-12 |
|
alanine-tRNA ligase
Pssm-ID: 178546 [Multi-domain] Cd Length: 223 Bit Score: 65.87 E-value: 6.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 487 LVVVLDNTPFYAESGGQVGDKGQL--LAEGVEFNVADTQKFGQGIGHKGQLALGSI------KVGDSLKAMVDKKLRhrt 558
Cdd:PLN02961 3 IALVLDRTIFHPQGGGQPSDTGRIviSGGDTKFSVQDVRRKDGVVYHYGVFEGSNPesaspfEAGDEVTVTVDESRR--- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 559 ELN---HSVTHLLHAALRQV--------LGTH------VTQKGSlVDPERLRfdfshfegVKREELKAVedlVNTQIRRN 621
Cdd:PLN02961 80 KLHsrlHSAGHLLDVCMARVglgplepgKGYHfpdgpfVEYKGK-IPQGELD--------SKQDELEAE---ANELIAEG 147
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 752763033 622 HELNFAEMDIEEAKA--KGAMALFGEKyDSKVRVVTMGDFSIELCGGTHVGRTGDIGLFKIT 681
Cdd:PLN02961 148 GKVSAAVLPYDEAAElcGGSLPDYIAK-DSTPRIVKIGDSPGCPCGGTHVADVSEITSVKVT 208
|
|
| class_II_aaRS-like_core |
cd00768 |
Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA ... |
8-242 |
1.36e-07 |
|
Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Pssm-ID: 238391 [Multi-domain] Cd Length: 211 Bit Score: 52.89 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 8 LRSAFLEYFRQQGHQVVDSSSLVP-------GNDPTLLFT----NAGMNQFKDCFLGMEKRSYV--------RAATAQRC 68
Cdd:cd00768 5 IEQKLRRFMAELGFQEVETPIVERepllekaGHEPKDLLPvgaeNEEDLYLRPTLEPGLVRLFVshirklplRLAEIGPA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 69 VRAGGKHNDLdnvgytaRHHTFFEMLGNFSFGDYF-----KEDAIRFAWEFLTgtlklpkeklcvtvyhtddeafDIWNK 143
Cdd:cd00768 85 FRNEGGRRGL-------RRVREFTQLEGEVFGEDGeeaseFEELIELTEELLR----------------------ALGIK 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 144 qigvpaENIIRIGDNKGAPFAsdnfwqmgdtGPCGPCTEIFYDHGEHiwggrpgspeedgdRFIEIWNIVFMQYN---RQ 220
Cdd:cd00768 136 ------LDIVFVEKTPGEFSP----------GGAGPGFEIEVDHPEG--------------RGLEIGSGGYRQDEqarAA 185
|
250 260
....*....|....*....|....*.
gi 752763033 221 SDGTLDPLPK----PAVDTGMGIERI 242
Cdd:cd00768 186 DLYFLDEALEyrypPTIGFGLGLERL 211
|
|
| ThrS |
COG0441 |
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA ... |
560-682 |
6.14e-05 |
|
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440210 [Multi-domain] Cd Length: 639 Bit Score: 46.56 E-value: 6.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 560 LNHSVTHLLHAALRQVL-GTHVT-----QKGslvdperlrF--DFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDI 631
Cdd:COG0441 71 LRHSAAHLLAQAVKRLYpDAKLTigpviENG---------FyyDFDLERPFTPEDLEKIEKEMKEIIKEDLPIEREEVSR 141
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 752763033 632 EEAKAKgaMALFGEKY----------DSKVRVVTMGDFsIELCGGTHVGRTGDIGLFKITS 682
Cdd:COG0441 142 EEAIEL--FKEKGEPYkveliedipeDEEISLYRQGEF-VDLCRGPHVPSTGKIKAFKLLS 199
|
|
| PRK12444 |
PRK12444 |
threonyl-tRNA synthetase; Reviewed |
560-685 |
3.01e-03 |
|
threonyl-tRNA synthetase; Reviewed
Pssm-ID: 183530 [Multi-domain] Cd Length: 639 Bit Score: 41.27 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752763033 560 LNHSVTHLLHAALRQVLGTHVTQKGSLVDPErLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEEAKAkga 639
Cdd:PRK12444 75 ARHSAAHILAQAVKRLYGDVNLGVGPVIENG-FYYDMDLPSSVNVEDLRKIEKEMKKIINENIKIERVEVSREEAAK--- 150
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 752763033 640 maLFGEKYDS----------KVRVVTM---GDFsIELCGGTHVGRTGDIGLFKITSEGG 685
Cdd:PRK12444 151 --LFQEMNDRlklelleaipSGESITLykqGEF-VDLCRGPHLPSTGYLKAFQLTHVSG 206
|
|
| |
