MULTISPECIES: zinc ABC transporter substrate-binding protein ZnuA [Hafnia]
zinc ABC transporter substrate-binding protein( domain architecture ID 10793287)
zinc ABC transporter substrate-binding protein functions as the initial receptor for the active uptake of Zn2+
List of domain hits
Name | Accession | Description | Interval | E-value | ||||||
znuA | PRK09545 | zinc ABC transporter substrate-binding protein ZnuA; |
2-334 | 0e+00 | ||||||
zinc ABC transporter substrate-binding protein ZnuA; : Pssm-ID: 236558 [Multi-domain] Cd Length: 311 Bit Score: 548.45 E-value: 0e+00
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Name | Accession | Description | Interval | E-value | ||||||
znuA | PRK09545 | zinc ABC transporter substrate-binding protein ZnuA; |
2-334 | 0e+00 | ||||||
zinc ABC transporter substrate-binding protein ZnuA; Pssm-ID: 236558 [Multi-domain] Cd Length: 311 Bit Score: 548.45 E-value: 0e+00
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ZnuA | COG4531 | ABC-type Zn2+ transport system, periplasmic component/surface adhesin ZnuA [Inorganic ion ... |
19-333 | 1.10e-155 | ||||||
ABC-type Zn2+ transport system, periplasmic component/surface adhesin ZnuA [Inorganic ion transport and metabolism]; Pssm-ID: 443599 [Multi-domain] Cd Length: 300 Bit Score: 438.11 E-value: 1.10e-155
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ZnuA | cd01019 | Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in ... |
26-333 | 1.38e-114 | ||||||
Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238501 [Multi-domain] Cd Length: 286 Bit Score: 333.57 E-value: 1.38e-114
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ZnuA | pfam01297 | Zinc-uptake complex component A periplasmic; ZnuA includes periplasmic solute binding proteins ... |
30-332 | 1.18e-67 | ||||||
Zinc-uptake complex component A periplasmic; ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host. Pssm-ID: 460151 [Multi-domain] Cd Length: 269 Bit Score: 213.18 E-value: 1.18e-67
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anch_rpt_subst | TIGR03772 | anchored repeat ABC transporter, substrate-binding protein; Members of this protein family are ... |
161-308 | 8.65e-10 | ||||||
anchored repeat ABC transporter, substrate-binding protein; Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family. [Transport and binding proteins, Unknown substrate] Pssm-ID: 163484 [Multi-domain] Cd Length: 479 Bit Score: 59.49 E-value: 8.65e-10
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Name | Accession | Description | Interval | E-value | ||||||
znuA | PRK09545 | zinc ABC transporter substrate-binding protein ZnuA; |
2-334 | 0e+00 | ||||||
zinc ABC transporter substrate-binding protein ZnuA; Pssm-ID: 236558 [Multi-domain] Cd Length: 311 Bit Score: 548.45 E-value: 0e+00
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ZnuA | COG4531 | ABC-type Zn2+ transport system, periplasmic component/surface adhesin ZnuA [Inorganic ion ... |
19-333 | 1.10e-155 | ||||||
ABC-type Zn2+ transport system, periplasmic component/surface adhesin ZnuA [Inorganic ion transport and metabolism]; Pssm-ID: 443599 [Multi-domain] Cd Length: 300 Bit Score: 438.11 E-value: 1.10e-155
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ZnuA | cd01019 | Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in ... |
26-333 | 1.38e-114 | ||||||
Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238501 [Multi-domain] Cd Length: 286 Bit Score: 333.57 E-value: 1.38e-114
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ZnuA | pfam01297 | Zinc-uptake complex component A periplasmic; ZnuA includes periplasmic solute binding proteins ... |
30-332 | 1.18e-67 | ||||||
Zinc-uptake complex component A periplasmic; ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host. Pssm-ID: 460151 [Multi-domain] Cd Length: 269 Bit Score: 213.18 E-value: 1.18e-67
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ZnuA | COG0803 | ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA [Inorganic ion transport and ... |
9-318 | 1.26e-52 | ||||||
ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA [Inorganic ion transport and metabolism]; Pssm-ID: 440566 [Multi-domain] Cd Length: 286 Bit Score: 175.05 E-value: 1.26e-52
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ZntC | cd01018 | Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ... |
30-309 | 2.81e-36 | ||||||
Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238500 [Multi-domain] Cd Length: 266 Bit Score: 131.71 E-value: 2.81e-36
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AdcA | cd01017 | Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of ... |
30-319 | 2.42e-33 | ||||||
Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238499 [Multi-domain] Cd Length: 282 Bit Score: 124.33 E-value: 2.42e-33
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PsaA | cd01137 | Metal binding protein PsaA. These proteins have been shown to function as initial receptors ... |
12-302 | 9.98e-21 | ||||||
Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238557 [Multi-domain] Cd Length: 287 Bit Score: 90.41 E-value: 9.98e-21
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TroA_c | cd01145 | Periplasmic binding protein TroA_c. These proteins are predicted to function as initial ... |
26-263 | 7.39e-16 | ||||||
Periplasmic binding protein TroA_c. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains. Pssm-ID: 238565 [Multi-domain] Cd Length: 203 Bit Score: 74.84 E-value: 7.39e-16
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TroA | cd01016 | Metal binding protein TroA. These proteins have been shown to function as initial receptors in ... |
30-310 | 4.31e-12 | ||||||
Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238498 [Multi-domain] Cd Length: 276 Bit Score: 65.46 E-value: 4.31e-12
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anch_rpt_subst | TIGR03772 | anchored repeat ABC transporter, substrate-binding protein; Members of this protein family are ... |
161-308 | 8.65e-10 | ||||||
anchored repeat ABC transporter, substrate-binding protein; Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family. [Transport and binding proteins, Unknown substrate] Pssm-ID: 163484 [Multi-domain] Cd Length: 479 Bit Score: 59.49 E-value: 8.65e-10
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TroA_b | cd01020 | Metal binding protein TroA_b. These proteins are predicted to function as initial receptors ... |
29-284 | 1.20e-07 | ||||||
Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). Pssm-ID: 238502 [Multi-domain] Cd Length: 264 Bit Score: 52.06 E-value: 1.20e-07
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Blast search parameters | ||||
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