|
Name |
Accession |
Description |
Interval |
E-value |
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
2-583 |
0e+00 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 1348.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 2 QTFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQD 81
Cdd:PRK09231 1 QTFQADLAIIGAGGAGLRAAIAAAEANPNLKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFDYHFHDTVAGGDWLCEQD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 82 VVDHFVHQCPREMTQLEQWGCPWSRKPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDI 161
Cdd:PRK09231 81 VVEYFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 162 LVDDGQARGLVALNMMEGTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSG 241
Cdd:PRK09231 161 LVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 242 ILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRAGRTIATPRGDVVYLDLRHLG 321
Cdd:PRK09231 241 ILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 322 EKKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELV 401
Cdd:PRK09231 321 EKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 402 VFGRVAGEQAARRALETAPANGSALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLA 481
Cdd:PRK09231 401 VFGRVAGEQAAERAATAGPGNEAALDAQAADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLA 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 482 ELKERFKRVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEGCTERDDVNFLKHTLAFHNPQGA 561
Cdd:PRK09231 481 ELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDEGCTERDDVNFLKHTLAFYNADGT 560
|
570 580
....*....|....*....|..
gi 742400114 562 PRLEYSDVKITKLPPAKRVYGA 583
Cdd:PRK09231 561 PRIEYSDVKITKSPPAKRVYGA 582
|
|
| fum_red_Fp |
TIGR01176 |
fumarate reductase (quinol), flavoprotein subunit; The terms succinate dehydrogenase and ... |
3-582 |
0e+00 |
|
fumarate reductase (quinol), flavoprotein subunit; The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Pssm-ID: 273485 [Multi-domain] Cd Length: 580 Bit Score: 1096.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 3 TFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDV 82
Cdd:TIGR01176 1 TAQHDIAVIGAGGAGLRAAIAAAEANPHLDVALISKVYPMRSHTVAAEGGSAAVTGDDDSLDEHFHDTVSGGDWLCEQDV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 83 VDHFVHQCPREMTQLEQWGCPWSRKPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDIL 162
Cdd:TIGR01176 81 VEYFVAEAPKEMVQLEHWGCPWSRKPDGRVNVRRFGGMKKERTWFAADKTGFHMLHTLFQTSLTYPQIMRYDEWFVTDLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 163 VDDGQARGLVALNMMEGTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGI 242
Cdd:TIGR01176 161 VDDGRVCGLVAIEMAEGRLVTILADAVVLATGGAGRVYPFNTNGGIVTGDGMAMAFRHGVPLRDMEFVQYHPTGLPGTGI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 243 LMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRAGRTIATPRGDVVYLDLRHLGE 322
Cdd:TIGR01176 241 LMTEGCRGEGGILVNKDGYRYLQDYGMGPETPVGEPKNKYMELGPRDKVSQAFWHEHNKGNTIDTPYGDVVYLDLRHLGE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 323 KKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVV 402
Cdd:TIGR01176 321 DLLDERLPFICELAKAYVHVDPVKEPIPVRPTVHYTMGGIETDINCETRIKGLFAVGECASVGLHGANRLGSNSLAELVV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 403 FGRVAGEQAARRALETAPANGSALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAE 482
Cdd:TIGR01176 401 FGRRAGEAAAERAARHQKSNESAIRAQARTVELRLERLLSQHGGENWADIRAEMGATMESGCGIYRDGPLMQKTIDKLAE 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 483 LKERFKRVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEGCTERDDVNFLKHTLAFHNPQGAP 562
Cdd:TIGR01176 481 LQERFKRAGIDDHSRVFNTDLLYLIELGGGLDVAEAMVHSALRRKESRGAHQRLDEGCTERDDVHFLKHTLAFRESDGTL 560
|
570 580
....*....|....*....|
gi 742400114 563 RLEYSDVKITKLPPAKRVYG 582
Cdd:TIGR01176 561 RVGYSPVKITRWPPGERVYG 580
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
31-581 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 898.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGGSAAVTQDH---DTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRK 107
Cdd:TIGR01812 23 LNTAVISKVYPTRSHTVAAQGGMAAALGNVdpdDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPFSRT 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 108 PDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGQARGLVALNMMEGTRVQIRAN 187
Cdd:TIGR01812 103 PDGRIAQRPFGGHSKDRTCYAADKTGHALLHTLYEQCLKL-GVSFFNEYFALDLIHDDGRVRGVVAYDLKTGEIVFFRAK 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 188 AVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQDY 267
Cdd:TIGR01812 182 AVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVNKNGERFMERY 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 268 gmGPEtplgepknkYMELGPRDKVSQAFWHEWRAGRTIATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKD 347
Cdd:TIGR01812 262 --APE---------KMELAPRDVVSRAMWTEIREGRGVGSPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKE 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 348 PIPVRPTAHYTMGGIETD----QNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRALETAPANg 423
Cdd:TIGR01812 331 PIPVRPTAHYSMGGIPTDytgrVICETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEYAAKTGNPA- 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 424 SALDAQTRDVETRLSNLMKQE-GNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSSVFNTD 502
Cdd:TIGR01812 410 ADIEEEAVKAEEALIDLLVESnGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVFNTD 489
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 742400114 503 LLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEGctERDDVNFLKHTLAFHNPQGAPRLEYSDVKITKLPPAKRVY 581
Cdd:TIGR01812 490 LLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYP--ERDDENWLKHTLAYYDNPGTPRLEYKPVTITKYEPAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
28-581 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 674.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 28 NPQLKIALISKVYPMRSHTVAAEGGSAAVT--QDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWS 105
Cdd:PRK06069 29 GGKLSVAVVSKTQPMRSHSVSAEGGTAAVLypEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 106 RKPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVALNMMEGTRVQIR 185
Cdd:PRK06069 109 RRPDGRISQRPFGGMSFPRTTFAADKTGFYIMHTLYSRALRFDNIHFYDEHFVTSLIVENGVFKGVTAIDLKRGEFKVFQ 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 186 ANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQ 265
Cdd:PRK06069 189 AKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKEGERFMK 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 266 DYgmGPEtplgepknkYMELGPRDKVSQAFWHEWRAGRTIATPRG-DVVYLDLRHLGEKKLLERLPFICELAKAYVGVDP 344
Cdd:PRK06069 269 RY--APQ---------KMELAPRDVVSRAIMTEIMEGRGFKHESGlCYVGLDLRHLGEEKINERLPLIREIAKKYAGIDP 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 345 VKDPIPVRPTAHYTMGGIETDQNCET------RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRALET 418
Cdd:PRK06069 338 VTEPIPVRPAAHYTMGGIHTDVYGRVltadgeWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRIAGEQAAEYALKR 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 419 APANGSALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSSV 498
Cdd:PRK06069 418 PAPSSPVEKLAEKEEKRIFDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRI 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 499 FNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEgcTERDDVNFLKHTLAFHNPQGaPRLEYSDVKITKLPPAK 578
Cdd:PRK06069 498 YNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDY--PKRDDENWLKHTLAYYTGGG-PKVTYTPVTITKWKPEE 574
|
...
gi 742400114 579 RVY 581
Cdd:PRK06069 575 RKY 577
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
28-581 |
6.33e-174 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 505.42 E-value: 6.33e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 28 NPQLKIALISKVYPMRSHTVAAEGGSAAVTQD---HDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPW 104
Cdd:PRK05945 26 DPSLDVAVVAKTHPIRSHSVAAQGGIAASLKNvdpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLF 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 105 SRKPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGQARGLVALNMMEGTRVQI 184
Cdd:PRK05945 106 SRLPDGRIAQRAFGGHSHNRTCYAADKTGHAILHELVNNLRRY-GVTIYDEWYVMRLILEDNQAKGVVMYHIADGRLEVV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 185 RANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYL 264
Cdd:PRK05945 185 RAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGDRFM 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 265 QDYGmgpetplgePKNkyMELGPRDKVSQAFWHEWRAGRTI---ATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVG 341
Cdd:PRK05945 265 ADYA---------PSR--MELAPRDITSRAITLEIRAGRGInpdGSAGGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVG 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 342 VDPVKDPIPVRPTAHYTMGGIETDQNCETR------IKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAAR-- 413
Cdd:PRK05945 334 VDAVTEPMPVRPTVHYCMGGIPVNTDGRVRrsadglVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEyv 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 414 --RALetapangSALDAQT--RDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKR 489
Cdd:PRK05945 414 qgRKL-------PEVDEQRylKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQ 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 490 VNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRldEGCTERDDVNFLKHTLAFHNPQGaPRLEYSDV 569
Cdd:PRK05945 487 IYLDDKGKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSR--EDYPQRDDQNFLKHTLAYYSPAG-IDIQYMPV 563
|
570
....*....|..
gi 742400114 570 KITKLPPAKRVY 581
Cdd:PRK05945 564 VITMFEPQERKY 575
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
31-581 |
6.01e-173 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 504.66 E-value: 6.01e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGG-SAAV---TQDHdtFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSR 106
Cdd:PTZ00139 53 YKTACISKLFPTRSHTVAAQGGiNAALgnmTEDD--WRWHAYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSR 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 107 KPDGSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVD-DGQARGLVALNMM 177
Cdd:PTZ00139 131 TKDGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAMLHTLYGQSLKY-DCNFFIEYFALDLIMDeDGECRGVIAMSME 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 178 EGTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVN 257
Cdd:PTZ00139 210 DGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRN 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 258 KDGYRYLQDYGmgpetplgePKNKymELGPRDKVSQAFWHEWRAGRTIAtPRGDVVYLDLRHLGEKKLLERLPFICELAK 337
Cdd:PTZ00139 290 SEGERFMERYA---------PTAK--DLASRDVVSRAMTIEILEGRGCG-PNKDHIYLDLTHLPPETLHERLPGISETAK 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 338 AYVGVDPVKDPIPVRPTAHYTMGGIET---------DQNCETRI-KGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVA 407
Cdd:PTZ00139 358 IFAGVDVTKEPIPVLPTVHYNMGGIPTnwktqvltqRNGDDDKIvPGLLAAGEAACASVHGANRLGANSLLDIVVFGRAA 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 408 GEQAAR-----RALETAPAN-GSALDAqtrdvetRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLA 481
Cdd:PTZ00139 438 ANTVMEilkpgRPQPDLPKDaGEASIA-------RLDKIRHNKGDISTAQIRKRMQRTMQKHAAVFRIGESLQEGVEKIK 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 482 ELKERFKRVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDegCTERDDVNFLKHTLAF--HNPQ 559
Cdd:PTZ00139 511 EIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDD--FPERDDKNWMKHTLSYirDVKK 588
|
570 580
....*....|....*....|....*....
gi 742400114 560 GAPRLEYSDVKITKL-------PPAKRVY 581
Cdd:PTZ00139 589 GKVRLTYRPVITTPLdnemetvPPAKRVY 617
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
29-553 |
1.31e-162 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 474.59 E-value: 1.31e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 29 PQLKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKP 108
Cdd:COG0029 25 ERGRVTLLTKGELGESNTRWAQGGIAAVLDPGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVPFDRDE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 109 DGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVD-DGQARGLVALNMMEGTRVQIRAN 187
Cdd:COG0029 105 DGELALTREGGHSRRRILHAGDATGREIERALLEAVRAHPNITVLENHFAVDLITDaDGRCVGAYVLDEKTGEVETIRAK 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 188 AVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL---PGSGILMTEGCRGEGGILVNKDGYRYL 264
Cdd:COG0029 185 AVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALyhpGAPSFLISEAVRGEGAVLRNADGERFM 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 265 QDYgmgpeTPLGEpknkymeLGPRDKVSQAFWHEWRAGRtiatprGDVVYLDLRHLGEKKLLERLPFICELAKAYvGVDP 344
Cdd:COG0029 265 PDY-----HPRAE-------LAPRDVVARAIDAEMKKTG------GDCVYLDISHLDAEFIRERFPTIYARCLEL-GIDI 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 345 VKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRALE-TAPANG 423
Cdd:COG0029 326 TKEPIPVAPAAHYTMGGVATDLDGRTSIPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAARLAEsPLPPEI 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 424 SALDAQTRDVETRLSNlmkqegNENWAKIRDEMGlsmeEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSSvfntdl 503
Cdd:COG0029 406 PEWDESVTDPDEEVLI------AHLRDELRRLMW----DYVGIVRTAKGLERALRRLELLREEIEEYANFRVSR------ 469
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 742400114 504 lYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDegCTERDDvNFLKHTL 553
Cdd:COG0029 470 -DLLELRNLLLVAELIVRAALARKESRGAHYRSD--YPETDP-AWRRHTV 515
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
31-581 |
2.88e-154 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 457.40 E-value: 2.88e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGG-SAAV-TQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKP 108
Cdd:PLN00128 74 FNTACITKLFPTRSHTVAAQGGiNAALgNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 109 DGSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVD-DGQARGLVALNMMEG 179
Cdd:PLN00128 154 DGKIYQRAFGGQSLDfgkggqayRCACAADRTGHAMLHTLYGQAMKH-NTQFFVEYFALDLIMDsDGACQGVIALNMEDG 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 180 TRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKD 259
Cdd:PLN00128 233 TLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 260 GYRYLQDYGmgpetplgePKNKymELGPRDKVSQAFWHEWRAGRTIAtPRGDVVYLDLRHLGEKKLLERLPFICELAKAY 339
Cdd:PLN00128 313 GERFMERYA---------PTAK--DLASRDVVSRSMTMEIREGRGVG-PEKDHIYLHLNHLPPEVLKERLPGISETAAIF 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 340 VGVDPVKDPIPVRPTAHYTMGGIETD----------QNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGE 409
Cdd:PLN00128 381 AGVDVTKEPIPVLPTVHYNMGGIPTNyhgevvtikgDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACAN 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 410 QAARRALETAPANGSALDAQTRDVEtRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKR 489
Cdd:PLN00128 461 RVAEIAKPGEKQKPLPKDAGEKTIA-WLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHD 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 490 VNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRldEGCTERDDVNFLKHTLAFHnPQGAPRLEYSDV 569
Cdd:PLN00128 540 VKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAR--EDFTKRDDENWMKHTLGYW-EEGKVRLDYRPV 616
|
570
....*....|....*....
gi 742400114 570 KITKL-------PPAKRVY 581
Cdd:PLN00128 617 HMNTLddevetfPPKARVY 635
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
32-581 |
2.35e-149 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 442.40 E-value: 2.35e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 32 KIALISKVYPMRSHTVAAEGGSAAVTQDH----DTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRK 107
Cdd:PRK06452 30 KVAVISKVFPTRSHSAAAEGGIAAYIPGNsdpnDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWGALFNRQ 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 108 PDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGQARGLVALNMMEGTRVQIRAN 187
Cdd:PRK06452 110 PDGRVAVRYFGGQTYPRTRFVGDKTGMALLHTLFERTSGL-NVDFYNEWFSLDLVTDNKKVVGIVAMQMKTLTPFFFKTK 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 188 AVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQDY 267
Cdd:PRK06452 189 AVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGILKNVKGERFMTKY 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 268 GmgpetplgePKNkyMELGPRDKVSQAFWHEWRAGRTIAtprGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKD 347
Cdd:PRK06452 269 A---------PKK--LDLAPRDIVSRAIITEIREGRGFP---GGYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFTE 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 348 PIPVRPTAHYTMGGIETD-QNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRALETAPANGSAL 426
Cdd:PRK06452 335 PIPVRPAQHYYMGGIDVDiDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQFLKSNPGNPTSNY 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 427 DAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSSVFNTDLLYT 506
Cdd:PRK06452 415 EKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKSKVYNTEFFNA 494
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742400114 507 IELGYGLDVAECMAHSAFNRKESRGAHQRLDegCTERDDVNFLKHTLAFHNPQGApRLEYSDVKITKLPPAKRVY 581
Cdd:PRK06452 495 LELRNMLDLALVIAKSALERKESRGAHYRTD--YPDRDDNNWLKHTIAYLRGNTV-EVTFKPVKITRWKPEPRVY 566
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
36-594 |
2.76e-145 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 435.18 E-value: 2.76e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 36 ISKVYPMRSHTVAAEGGSAA-----VTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSR---- 106
Cdd:PRK08626 34 LSLVPAKRSHSAAAQGGMQAslgnaVKGEGDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGVPWTRvtag 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 107 ---------------KPD--GSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGQAR 169
Cdd:PRK08626 114 prtvvingekvtiteKEEahGLINARDFGGTKKWRTCYTADGTGHTMLYAVDNEAIKL-GVPVHDRKEAIALIHDGKRCY 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 170 GLVALNMMEGTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGV-PLRDMEFVQYHPTGLPGSGILMTEGC 248
Cdd:PRK08626 193 GAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFHPTAIVPSGILVTEGC 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 249 RGEGGILVNKDGYRYLQDYgmgpetplgEPKNKymELGPRDKVSQAFWHEWRAGRTIATPRGDVVYLDLRHLGEKKLLER 328
Cdd:PRK08626 273 RGDGGLLRDKDGYRFMPDY---------EPEKK--ELASRDVVSRRMTEHIRKGKGVKSPYGPHLWLDIRILGRKHIETN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 329 LPFICELAKAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVA 407
Cdd:PRK08626 342 LREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESyGLKGLFSAGEAACWDMHGFNRLGGNSLAETVVAGMIV 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 408 GEQAARRALETAPANGSAL--DAQTRdVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKE 485
Cdd:PRK08626 422 GKYVADFCLGNELEIDTALveKFVKK-QQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPELEKAVKELQELLE 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 486 RFKRVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEgcTERDDVNFLKHTLAFHnPQGA---P 562
Cdd:PRK08626 501 RSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDY--PKRNDRDWLNRTLASW-PEGEaleP 577
|
570 580 590
....*....|....*....|....*....|....*...
gi 742400114 563 RLEYSDVKITK--LPPAKRVYGA----EAEAQEKKNKE 594
Cdd:PRK08626 578 TLEYEPLDVMKmeLPPGFRGYGAgniiEHPDTEKRQAE 615
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
31-415 |
9.68e-128 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 382.64 E-value: 9.68e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGGSAAV------TQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPW 104
Cdd:COG1053 27 LKVLVLEKVPPRGGHTAAAQGGINAAgtnvqkAAGEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEAQGVPF 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 105 SRKPDGSVNvrRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGQARGLVALNMmEGTRVQI 184
Cdd:COG1053 107 SRTPDGRLP--QFGGHSVGRTCYAGDGTGHALLATLYQAALRL-GVEIFTETEVLDLIVDDGRVVGVVARDR-TGEIVRI 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 185 RANAVVMATGGAGRVYR------------YNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRG-E 251
Cdd:COG1053 183 RAKAVVLATGGFGRNYEmraeylpeaegaLSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGDGGLISEGARGkP 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 252 GGILVNKDGYRYLQDYgmgpetplgepknkymelGPRDKVSQAFWHEWRAgrtiatPRGDVvyLDLRHLGEKKLLERLPF 331
Cdd:COG1053 263 GGILVNKEGERFMNEY------------------APRDVVSRAILEEIDE------PAYLV--LDLRHRRRLEEYLEAGY 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 332 IC------ELAKAY-------------------VGVDPVKD-----------PIPVRPTAHYTMGGIETDQNCETR---- 371
Cdd:COG1053 317 LVkadtieELAAKLgidaaelaatvarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVLdadg 396
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 742400114 372 --IKGLFAVGECsSVGLHGANRLGSNSLAELVVFGRVAGEQAARRA 415
Cdd:COG1053 397 tpIPGLYAAGEA-AGSVHGANRLGGNSLGDALVFGRIAGRHAAEYA 441
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
28-565 |
1.82e-124 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 377.78 E-value: 1.82e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 28 NPQLKIALISKVYPMRSH-TVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSR 106
Cdd:PRK06263 27 ERGKNVVIVSKGLFGKSGcTVMAEGGYNAVLNPEDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDR 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 107 KPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPqIQRFDEHFVLDILVDDGQA-RGLVALNMMEGTRVQIR 185
Cdd:PRK06263 107 TEDGEIAQRPFGGQSFNRTCYAGDRTGHEMMMGLMEYLIKER-IKILEEVMAIKLIVDENREvIGAIFLDLRNGEIFPIY 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 186 ANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL----PGSGILMTEGCRGEGGILVNKDGY 261
Cdd:PRK06263 186 AKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGE 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 262 RYLQDYgmgpetplgEPKNkyMELGPRDKVSQAFWHEWRAGRtiATPRGDvVYLDLRHLGEKKLLERLPFICELAKAyVG 341
Cdd:PRK06263 266 RFMKRY---------DPER--MELSTRDVVARAIYTEIQEGR--GTNHGG-VYLDVTHLPDEVIEEKLETMLEQFLD-VG 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 342 VDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSvGLHGANRLGSNSLAELVVFGRVAGEQAARRALETAPA 421
Cdd:PRK06263 331 VDIRKEPMEVAPTAHHFMGGIRINEDCETNIPGLFACGEVAG-GVHGANRLGGNALADTQVFGAIAGKSAAKNAENNEFK 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 422 NgsalDAQTRDVE-TRLSNLMKQ-EGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSsvf 499
Cdd:PRK06263 410 K----VNRSVEEDiARIKSEIKFlNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGIV--- 482
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742400114 500 ntDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDegCTERDDvNFLKHTLAFHNPQGAPRLE 565
Cdd:PRK06263 483 --DFNKALELENMILVAELVIKSALLRKESRGAHYRED--YPETND-EWFGNIILNKNKIKFEKRE 543
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
35-591 |
7.80e-119 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 364.68 E-value: 7.80e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 35 LISKVYPMRSHTVAAEGG-SAAV--TQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDGS 111
Cdd:PRK08641 31 LFSLVPVKRSHSVCAQGGiNGAVntKGEGDSPWIHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRMGVMFNRTPEGL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 112 VNVRRFGGMKIERTWFAADKTGFHMLHTLFQtslkypQIQRFD--------EH--FVLDILVDDGQARGLVALNM--MEg 179
Cdd:PRK08641 111 LDFRRFGGTLHHRTAFAGATTGQQLLYALDE------QVRRYEvaglvtkyEGweFLGAVLDDEGVCRGIVAQDLftME- 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 180 TRVqIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGI--LMTEGCRGEGG-ILV 256
Cdd:PRK08641 184 IES-FPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLMSESARGEGGrVWT 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 257 NKDGYRY--LQDygMGPetplgepknKYMELGPRDKVSQAFWHE-WRAGRTIatpRG-DVVYLDLRHLGEKKLLERLPFI 332
Cdd:PRK08641 263 YKDGKPWyfLEE--KYP---------AYGNLVPRDIATREIFDVcVEQKLGI---NGeNMVYLDLSHKDPKELDIKLGGI 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 333 CELAKAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSsVGLHGANRLGSNSLAELVVFGRVAGEQAA 412
Cdd:PRK08641 329 LEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDYDQMTNIPGLFAAGECD-YSYHGANRLGANSLLSAIYGGMVAGPNAV 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 413 R--RALETAPANG--SALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFK 488
Cdd:PRK08641 408 EyiKGLGKSADDVssSVFEQALKQEQEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLETDEKIQELMERYK 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 489 RVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDegCTERDDVNFLKHTLAFHNPQG-APRLEYS 567
Cdd:PRK08641 488 RISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPE--FPERNDENWLKTTMATYTPEGeEPEFSYE 565
|
570 580
....*....|....*....|....
gi 742400114 568 DVKITKLPPAKRVYGAEAEAQEKK 591
Cdd:PRK08641 566 DVDTSLIPPRKRDYTSKKKGAKKL 589
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
29-537 |
1.02e-115 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 353.34 E-value: 1.02e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 29 PQLKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKP 108
Cdd:TIGR00551 23 EKGRVSVITKASVTDSNSYYAQGGIAAALAETDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVTFDRNE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 109 DGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVALNmmEGTRVQIRANA 188
Cdd:TIGR00551 103 QGGVALTREGGHSYPRIFHAGDATGREIIPTLEKHARSEPNVNIIEGEFALDLLIETGRCAGVFVQG--SGTLETLHADA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 189 VVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGI---LMTEGCRGEGGILVNKDGYRYLQ 265
Cdd:TIGR00551 181 VVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEGAKLVDRDGERFMA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 266 DYgmgpeTPLGEpknkymeLGPRDKVSQAFWHEWRAGRtiatprGDVVYLDLRHLGEKKllERLPFICELAKAYvGVDPV 345
Cdd:TIGR00551 261 DR-----HPRGE-------LAPRDIVARAIDMEMAEGG------GDCVFLDASGIENFK--DRFPTIYAVCRGA-GIDPE 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 346 KDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRALETAPANGSA 425
Cdd:TIGR00551 320 REPIPVAPGAHYTMGGISVDAFGRTTIPGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTISREPPYASREYQSG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 426 LDAQTRdVETRLSnlmKQEGNENWAKIRdemgLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVnitdnssvfntdlly 505
Cdd:TIGR00551 400 VWDEPR-SENPLD---RHELQHKMSSLR----SVLWNHAGIVRLEWSLREALRKLVEIQDEVDER--------------- 456
|
490 500 510
....*....|....*....|....*....|..
gi 742400114 506 tIELGYGLDVAECMAHSAFNRKESRGAHQRLD 537
Cdd:TIGR00551 457 -MELSNLKLVAKLVTISALKREESRGAHYRLD 487
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
31-537 |
4.82e-114 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 353.57 E-value: 4.82e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGGSAAV---TQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRK 107
Cdd:PRK07803 32 LRVAVVCKSLFGKAHTVMAEGGCAAAmgnVNPKDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRT 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 108 PDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQ------------IQRFDEHFVLDILVDDGQARGLVALN 175
Cdd:PRK07803 112 KDGRISQRNFGGHTYPRLAHVGDRTGLELIRTLQQKIVSLQQedhaelgdyearIKVFAECTITELLKDGGRIAGAFGYW 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 176 MMEGTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL--PGS--GILMTEGCRGE 251
Cdd:PRK07803 192 RESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFVQFHPTGMvwPPSvkGILVTEGVRGD 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 252 GGILVNKDGYRYLQDY------GMGPETP------LGEPKNKYM--ELGPRDKVSQAFWHEWRAGRtiATPRGDvVYLDL 317
Cdd:PRK07803 272 GGVLKNSEGKRFMFDYipdvfkGQYAETEeeadrwYKDNDNNRRppELLPRDEVARAINSEVKAGR--GSPHGG-VYLDI 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 318 -RHLGEKKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMGGIETD-QNCETRIKGLFAVGECSSvGLHGANRLGSN 395
Cdd:PRK07803 349 aSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGVEVDpDTGAATVPGLFAAGECAG-GMHGSNRLGGN 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 396 SLAELVVFGRVAGEQAAR--RALETAPA-NGSALDAQTRDVetrLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPEL 472
Cdd:PRK07803 428 SLSDLLVFGRRAGLGAADyvRGLGSRPAvSEEAVDAAAREA---LAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDE 504
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742400114 473 MQKTIDKLAELKERFKRVNItDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLD 537
Cdd:PRK07803 505 IEQALEKLAELKERAANVSV-EGHRQYNPGWHLALDLRNMLLVSECVARAALERTESRGGHTRDD 568
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
41-581 |
1.19e-111 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 346.45 E-value: 1.19e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 41 PMRSHTVAAEGG-SAAVTQ--DHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDGSVNVRRF 117
Cdd:TIGR01811 33 PRRAHSIAAQGGiNGAVNTkgDGDSPWRHFDDTVKGGDFRARESPVKRLAVASPEIIDLMDAMGVPFAREYGGLLDTRSF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 118 GGMKIERTWFAADKTGFHMLHTLFQTSLKYPQ---IQRFDEHFVLDILVDDG-QARGLVALNMMEGTRVQIRANAVVMAT 193
Cdd:TIGR01811 113 GGVQVSRTAYARGQTGQQLLLALDSALRRQIAaglVEKYEGWEMLDIIVVDGnRARGIIARNLVTGEIETHSADAVILAT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 194 GGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSG------ILMTEGCRGEGGILVnkdgYRYLQDY 267
Cdd:TIGR01811 193 GGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGtwqsklRLMSESLRNDGRIWT----PKEKNDN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 268 GMGPETPLGEP----KNKYMELG---PRDKVSQAFWHEWRAGRTIAtPRGDVVYLDLRH----LGEKKLLERLPFICELA 336
Cdd:TIGR01811 269 RDPNTIPEDKRdyflERRYPAFGnlvPRDIASRAIFQVCDAGKGVG-PGENAVYLDFSDaderLGRKEIDAKYGNLFEMY 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 337 KAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECsSVGLHGANRLGSNSLAELVVFGRVAGEQAA---- 412
Cdd:TIGR01811 348 EKFTGDDPYKVPMRIFPAVHYTMGGLWVDYDQMTNIPGLFAAGEC-DFSQHGANRLGANSLLSAIADGYFALPFTIpnyl 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 413 --RRALETAPANGSALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERF-KR 489
Cdd:TIGR01811 427 gpELSSEDMPEDAPEFQAALAEEQERFDRLLKMRGDENPYYLHRELGEIMTENCGVSRNNEKLLKTDEKIRELRERFwKN 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 490 VNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLD----EGCTERDDVNFLKHTLAFHNPQ-GAPRL 564
Cdd:TIGR01811 507 IDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEfptpDGEAERNDEEFLKVTAWEFQGEnDAPEF 586
|
570
....*....|....*..
gi 742400114 565 EYSDVKITKLPPAKRVY 581
Cdd:TIGR01811 587 HYEELDFELVPPRKRDY 603
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
31-397 |
5.66e-108 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 330.02 E-value: 5.66e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGGSAAVTQDH----DTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSR 106
Cdd:pfam00890 23 LKVAVVEKGQPFGGATAWSSGGIDALGNPPqggiDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEALGVPFSR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 107 KPDGSVNVRRFGGMKIER--TWFAADK-----TGFHMLHTLFQTSLKYPqIQRFDEHFVLDILVDDGQARGLVALNMMEG 179
Cdd:pfam00890 103 TEDGHLDLRPLGGLSATWrtPHDAADRrrglgTGHALLARLLEGLRKAG-VDFQPRTAADDLIVEDGRVTGAVVENRRNG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 180 TRVQIRAN-AVVMATGGAGR---------VYRYNTNGGIVTGDGMGMAFHHGVPLRD--MEFVQYHPTGLPG----SGIL 243
Cdd:pfam00890 182 REVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSLVGirlgSGLL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 244 MtEGCRGEGGILVNKDGYRYLqdygmgpetplgepknkyMELGPRDKVSQAFWHewragRTIATPRGDVVYLDLRH-LGE 322
Cdd:pfam00890 262 I-EALRGEGGILVNKDGRRFM------------------NELASRDVVSRAITR-----NEIDEGRGANVYLDASGsLDA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 323 KKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCETR------IKGLFAVGECSSVGLHGANRLGSNS 396
Cdd:pfam00890 318 EGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLdadgqpIPGLYAAGEVACGGVHGANRLGGNS 397
|
.
gi 742400114 397 L 397
Cdd:pfam00890 398 L 398
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
29-553 |
6.16e-105 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 327.39 E-value: 6.16e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 29 PQLKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKP 108
Cdd:PRK07395 30 SHLRVGLITKDTLKTSASDWAQGGIAAAIAPDDSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRHG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 109 DGSvnvrrfgGMKIE------RTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVD--DGQARGLVALNmmEGT 180
Cdd:PRK07395 110 QHL-------ALTLEaahsrpRVLHAADTTGRAIVTTLTEQVLQRPNIEIISQALALSLWLEpeTGRCQGISLLY--QGQ 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 181 RVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSG---ILMTEGCRGEGGILVN 257
Cdd:PRK07395 181 ITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGaprFLISEAVRGEGAHLVD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 258 KDGYRYLQDYgmgpeTPLGEpknkymeLGPRDKVSQAFWHEWRagRTIATPRGDVVYLDLRHLGEKKLLERLPFICELAK 337
Cdd:PRK07395 261 AQGRRFAFDY-----HPAGE-------LAPRDVVSRAIFSHLQ--KTATDPATAHVWLDLRPIPAERIRRRFPNIIRVCQ 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 338 AYvGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGrvageqAARRALE 417
Cdd:PRK07395 327 KW-GIDVFQEPIPVAPAAHYWMGGVVTDLNNQTSIPGLYAVGETASTGVHGANRLASNSLLECLVFA------AQLAQLE 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 418 TAPANGSALDAQTRDVETRLSNLMKQEgnENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRV------- 490
Cdd:PRK07395 400 LPIEPPASPDLPPISFIIDASQWKNEQ--EQIQRIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALplsqfla 477
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 742400114 491 ------NITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEGCTerdDVNFLKHTL 553
Cdd:PRK07395 478 nlppgqTVSFNGPDAEQQLRLWAETRNLLDIAYLILKSALFRTESRGGHYRLDYPQT---DPAWQVHTL 543
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
32-537 |
5.11e-98 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 310.88 E-value: 5.11e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 32 KIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDGS 111
Cdd:PLN02815 53 TVAIITKDEPHESNTNYAQGGVSAVLDPSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDHGEDGN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 112 VNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVD-DGQAR---GLVALNMMEGTRVQIRAN 187
Cdd:PLN02815 133 LHLAREGGHSHHRIVHAADMTGREIERALLEAVKNDPNITFFEHHFAIDLLTSqDGGSIvchGADVLDTRTGEVVRFISK 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 188 AVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGI------------LMTEGCRGEGGIL 255
Cdd:PLN02815 213 VTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenafLITEAVRGDGGIL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 256 VNKDGYRYLQDYgmgpetplgepkNKYMELGPRDKVSQAFWHEWRAGRTiatprgDVVYLDLRHLGEKKLLERLPFIC-E 334
Cdd:PLN02815 293 YNLAGERFMPLY------------DERAELAPRDVVARSIDDQLKKRNE------KYVLLDISHKPREEILSHFPNIAaE 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 335 LAKayVGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARR 414
Cdd:PLN02815 355 CLK--RGLDITKQPIPVVPAAHYMCGGVRTGLQGETNVQGLYAAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDH 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 415 ALETAPANGSALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITD 494
Cdd:PLN02815 433 MARALRDVSAAAAWARPVAPTALADSVMDEILEWTAVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWEAILFRH 512
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 742400114 495 NSSVFNTDlLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLD 537
Cdd:PLN02815 513 GWKPTMVG-LEACEMRNLFCVAKLVVSSALARKESRGLHYTTD 554
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
29-537 |
1.10e-90 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 289.89 E-value: 1.10e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 29 PQLKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKP 108
Cdd:PRK09077 29 EHRRVAVLSKGPLSEGSTFYAQGGIAAVLDETDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 109 DGSVNVR----RFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDD------GQARGLVALNMME 178
Cdd:PRK09077 109 QANGEEGyhltREGGHSHRRILHAADATGKAVQTTLVERARNHPNITVLERHNAIDLITSDklglpgRRVVGAYVLNRNK 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 179 GTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL--P-GSGILMTEGCRGEGGIL 255
Cdd:PRK09077 189 ERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLyhPqARSFLITEALRGEGAYL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 256 VNKDGYRYLQDYgmgpetplgepkNKYMELGPRDKVSQAFWHEWRAgrtiatpRG-DVVYLDLRHLGEKKLLERLPFI-- 332
Cdd:PRK09077 269 KLPDGTRFMPDF------------DERAELAPRDIVARAIDHEMKR-------LGaDCVYLDISHKPADFIRQHFPTIye 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 333 -C-ELakayvGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQ 410
Cdd:PRK09077 330 rClEL-----GIDITKEPIPVVPAAHYTCGGVMVDLHGRTDLDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAED 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 411 AARRaLETAPANGS--ALDaqtrdvETRLSNlmkqeGNE------NWakirDEMGLSMEEGCGIYRTPELMQKTIDKLAE 482
Cdd:PRK09077 405 ILSR-LPKAPMPPTlpAWD------ESRVTD-----SDEevviqhNW----HELRLFMWDYVGIVRTTKRLERALHRIRL 468
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 742400114 483 LKERfkrvnITDNSSVF--NTDLLytiELGYGLDVAECMAHSAFNRKESRGAHQRLD 537
Cdd:PRK09077 469 LQQE-----IDEYYANFrvSNNLL---ELRNLVQVAELIVRCAMERKESRGLHYTLD 517
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
49-537 |
5.09e-89 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 284.88 E-value: 5.09e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 49 AEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDGSVNV-------RRfggmK 121
Cdd:PRK07512 50 AQGGIAAALGPDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRLALgleaahsRR----R 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 122 IERTwfAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVALNmmEGTRVQIRANAVVMATGGAGRVYR 201
Cdd:PRK07512 126 IVHV--GGDGAGAAIMRALIAAVRATPSITVLEGAEARRLLVDDGAVAGVLAAT--AGGPVVLPARAVVLATGGIGGLYA 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 202 YNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL-------PgsgiLMTEGCRGEGGILVNKDGYRYLQDYgmgpeTP 274
Cdd:PRK07512 202 VTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIdigrdpaP----LATEALRGEGAILINEDGERFMADI-----HP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 275 LGEpknkymeLGPRDKVSQAFWHEWRAGRTiatprgdvVYLDLRHLGEKKLLERLPFICELAKAyVGVDPVKDPIPVRPT 354
Cdd:PRK07512 273 GAE-------LAPRDVVARAVFAEIAAGRG--------AFLDARAALGAHFATRFPTVYAACRS-AGIDPARQPIPVAPA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 355 AHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRALETA-PANGSALDAQTRDV 433
Cdd:PRK07512 337 AHYHMGGIAVDADGRSSLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAAAaPLSAAAAPALDPAD 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 434 ETRLSNLMKQegnenwakirdemglsmeeGCGIYRTPELMQKTIDKLAELKERFKRvniTDNSSVfntdllytielgygl 513
Cdd:PRK07512 417 LALLRPIMSR-------------------HVGVLRDADGLRRAIAALLPLEAGAGP---AADPAT--------------- 459
|
490 500
....*....|....*....|....
gi 742400114 514 dVAECMAHSAFNRKESRGAHQRLD 537
Cdd:PRK07512 460 -VALLIAVAALAREESRGAHFRTD 482
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
36-537 |
9.04e-87 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 278.80 E-value: 9.04e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 36 ISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDGSVNVR 115
Cdd:PRK08071 31 ITKKTKRNSNSHLAQGGIAAAVATYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGPLHLG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 116 RFGGMKIERTWFAA-DKTGFHMLHTLFQTSLkyPQIQRFDEHFVLDILVDDGQARGLVALNMmEGTRVQIRANAVVMATG 194
Cdd:PRK08071 111 KEGAHRKRRILHAGgDATGKNLLEHLLQELV--PHVTVVEQEMVIDLIIENGRCIGVLTKDS-EGKLKRYYADYVVLASG 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 195 GAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGI---LMTEGCRGEGGILVNKDGYRYLQDYgmgp 271
Cdd:PRK08071 188 GCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGRcvgLVSEAVRGEGAVLINEDGRRFMMGI---- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 272 eTPLGEpknkymeLGPRDKVSQAFWHEwragrtiaTPRGDVVYLDLRHLGEKKllERLPFICELAKAYvGVDPVKDPIPV 351
Cdd:PRK08071 264 -HPLAD-------LAPRDVVARAIHEE--------LLSGEKVYLNISSIQNFE--ERFPTISALCEKN-GVDIETKRIPV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 352 RPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEqaarrALETAPANGSALDAQTR 431
Cdd:PRK08071 325 VPGAHFLMGGVKTNLDGETSIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAE-----HILTKATKPRLNPFAEK 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 432 DVETRLSNLM--KQEgnenwakIRDEMGlsmeEGCGIYRTPelmqktiDKLAELKERFKRVNITDnsSVFNTDLLY--TI 507
Cdd:PRK08071 400 EKKFIVLNHLptKEE-------IQEKMM----KYVGIVRTE-------QSLSEAKRWLEKYGVRN--MILDHDALTneEI 459
|
490 500 510
....*....|....*....|....*....|
gi 742400114 508 ELGYGLDVAECMAHSAFNRKESRGAHQRLD 537
Cdd:PRK08071 460 ELSHMLTVAKLIVVSALQRTESRGGHYRSD 489
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
31-564 |
5.03e-81 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 264.53 E-value: 5.03e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDG 110
Cdd:PRK07804 40 RRVLVVTKAALDDGSTRWAQGGIAAVLDPGDSPEAHVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGARFDESPDG 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 111 SVNVRRFGGMKIERTWFAA-DKTGFHMLHTLfQTSLKYPQIQRFDEHFVLDILVD-DGQARGLVALNMMEGTRV---QIR 185
Cdd:PRK07804 120 RWALTREGGHSRRRIVHAGgDATGAEVQRAL-DAAVRADPLDIREHALALDLLTDgTGAVAGVTLHVLGEGSPDgvgAVH 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 186 ANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL-PGSGI-----LMTEGCRGEGGILVNKD 259
Cdd:PRK07804 199 APAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLfLGPAAggqrpLISEAVRGEGAILVDAQ 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 260 GYRYlqdygMGPETPLGEpknkymeLGPRDKVSQAFwhewrAGRTIATPRgDVVYLDLRHLgeKKLLERLPFICELAKAy 339
Cdd:PRK07804 279 GNRF-----MAGVHPLAD-------LAPRDVVAKAI-----DRRMKATGD-DHVYLDARGI--EGFARRFPTITASCRA- 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 340 VGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAARRaletA 419
Cdd:PRK07804 338 AGIDPVRQPIPVAPAAHYSCGGVVTDVYGRTSVPGLYAAGEVACTGVHGANRLASNSLLEGLVVGERAGAAAAAH----A 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 420 PANGSALDAQTRDVETRLSNlmkqegnenwAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKErfkRVNITDNSSVF 499
Cdd:PRK07804 414 AAAGRPRATPAVGPEPGLLP----------ALDRAELQRAMTRGAGVLRSAAGLARAADRLAAGAP---ARVVPGRADWE 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742400114 500 NTDLLYtielgygldVAECMAHSAFNRKESRGAHQRLDEGctERDDvNFLKHTLAFHNPQGAPRL 564
Cdd:PRK07804 481 DTNLTL---------VARALVAAALARTESRGCHWREDFP--DTDD-EWARSIVVRLADDGNLVV 533
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
41-581 |
1.81e-72 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 244.73 E-value: 1.81e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 41 PMRSHTVAAEGG-SAA--VTQDHDTFDYHFHDTVAGGDWLC-EQDV----------VDHFVHQcpremtqleqwGCPWSR 106
Cdd:PRK07573 70 PRRAHSIAAQGGiNAAknYQNDGDSVYRLFYDTVKGGDFRArEANVyrlaevsvniIDQCVAQ-----------GVPFAR 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 107 KPDGSVNVRRFGGMKIERTWFAADKTGFHMLhtLFQTSLKYPQIQR-----FDEHFVLDILVDDGQARGLVALNMMEGtr 181
Cdd:PRK07573 139 EYGGLLANRSFGGAQVSRTFYARGQTGQQLL--LGAYQALSRQIAAgtvkmYTRTEMLDLVVVDGRARGIVARNLVTG-- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 182 vQIR---ANAVVMATGGAGRVYRYNTNGgivtgdgMG-------MAFHHGVPLRDMEFVQYHPTGLPGSG------ILMT 245
Cdd:PRK07573 215 -EIErhtADAVVLATGGYGNVFYLSTNA-------MGsnataiwRAHKKGAYFANPCFTQIHPTCIPVSGdyqsklTLMS 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 246 EGCRGEGGILVNKDgyryLQDYGMGPETPLGEpKNKYME--------LGPRDKVSQAFWHEWRAGRTIAtPRGDVVYLDL 317
Cdd:PRK07573 287 ESLRNDGRIWVPKK----KGDKRKPNDIPEEE-RDYYLErrypafgnLVPRDVASRAAKERCDAGRGVG-PTGLGVYLDF 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 318 R----HLGEKKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECS-SVglHGANRL 392
Cdd:PRK07573 361 AdaikRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMSTIPGLFVIGEANfSD--HGANRL 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 393 GSNSLAELVVFG------RVAGEQAARRALETAPANGSALDAQTRDVETRLSNLMKQEGNENWAKIRDEMGLSMEEGCGI 466
Cdd:PRK07573 439 GASALMQGLADGyfvlpyTIGNYLADTIGTPKVSTDHPEFKEAEAEVQDRIDRLLNIKGKRTVDSFHRELGKIMWDYCGM 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 467 YRTPELMQKTIDKLAELKERF-KRVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLD----EGCT 541
Cdd:PRK07573 519 ARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQELEKAGRVADFLELGELMCRDALHREESCGGHFREEhqteDGEA 598
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 742400114 542 ERDDVNFlKHTLA--FHNPQGAPRLEYSDVKITKLPPAKRVY 581
Cdd:PRK07573 599 LRDDENF-AYVAAweYKGDGKEPVLHKEPLEFENVKLAQRSY 639
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
31-409 |
7.43e-70 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 232.27 E-value: 7.43e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 31 LKIALISKVYPMRSHTVAAEGGSAAVTQDHDtFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSrKPDG 110
Cdd:PRK06175 27 LKILMVSKGKLNECNTYLAQGGISVARNKDD-ITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFD-KDEK 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 111 SVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVALNmmEGTRVQIRANAVV 190
Cdd:PRK06175 105 ELSYTKEGAHSVNRIVHFKDNTGKKVEKILLKKVKKRKNITIIENCYLVDIIENDNTCIGAICLK--DNKQINIYSKVTI 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 191 MATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGI-----LMTEGCRGEGGILVNKDGYRYLQ 265
Cdd:PRK06175 183 LATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGGKLLNSKGERFVD 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 266 dygmgpetplgepknkymELGPRDKVSQAFWHEWRAGRTiatprgDVVYLDLRHLGEKKLLERLPFICE--LAKayvGVD 343
Cdd:PRK06175 263 ------------------ELLPRDVVTKAILEEMKKTGS------NYVYLDITFLDKDFLKNRFPTIYEecLKR---GID 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742400114 344 PVKDPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGE 409
Cdd:PRK06175 316 ITKDAIPVSPAQHYFMGGIKVDLNSKTSMKNLYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAE 381
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
453-581 |
4.45e-55 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 182.64 E-value: 4.45e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 453 RDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGA 532
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 742400114 533 HQRLDegCTERDDVNFLKHTLAFHNP-QGAPRLEYSDVKITKL-PPAKRVY 581
Cdd:pfam02910 81 HARED--YPERDDENWLKHTLAYYDGdDGGPRLEYEPVTFTTLfPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
41-537 |
5.22e-52 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 185.39 E-value: 5.22e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 41 PMRSHTVAAEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKpdgsvnvRRFGGM 120
Cdd:PRK08401 34 IKKSNSYLAQAGIAFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLEFEGN-------ELEGGH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 121 KIERTWFAADKTGFHMLHTLFQTSlKYPQIQrFDEHFVLDILVDDGQARGLvalnMMEGTRvqIRANAVVMATGGAGRVY 200
Cdd:PRK08401 107 SFPRVFTIKNETGKHIIKILYKHA-RELGVN-FIRGFAEELAIKNGKAYGV----FLDGEL--LKFDATVIATGGFSGLF 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 201 RYN----TNGGIVTGDgmgmAFHHGVPLRDMEFVQYHPTGLPGS-GI-LMTEGCRGEGGILVNKDGYRYLQdygmgpetp 274
Cdd:PRK08401 179 KFTagspLNLGTLIGD----AVMKGAPARDLEFVQFHPTGFIGKrGTyLISEAVRGAGAKLVTGDGERFVN--------- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 275 lgepknkymELGPRDKVSQAFWHEWRAGRTiatprgdvVYLDLRHLGEKKllERLPFICELAKAYvGVDPVKDPIPVRPT 354
Cdd:PRK08401 246 ---------ELETRDIVARAIYRKMQEGKG--------VFLDATGIEDFK--RRFPQIYAFLRKE-GIDPSRDLIPVTPI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 355 AHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVvfgrVAGEQAARRALETAPANGSALDA-----Q 429
Cdd:PRK08401 306 AHYTIGGISVDTFYRTGIKNLYAIGEAASNGFHGANRLASNSLLECI----VSGLEVARTISRERPKLREVKEPpyhgyE 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 430 TRDVETrlsnlmkqegnenwakIRDemglSMEEGCGIYRTPELMQKTIDKLAELkERFKRVNItdnssvfntdllytiel 509
Cdd:PRK08401 382 LGDVDS----------------IRE----ILWNHAGIVRSEESLREGLKKLEGI-EADPRLKL----------------- 423
|
490 500
....*....|....*....|....*...
gi 742400114 510 gygldVAECMAHSAFNRKESRGAHQRLD 537
Cdd:PRK08401 424 -----LAKGVLECALAREESRGAHYRED 446
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
61-409 |
5.25e-41 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 154.42 E-value: 5.25e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 61 DTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPrEMTQLEQWGCPWsrKPDgsvNVRRFGGMKIERTWFAADK--TGFHMLH 138
Cdd:TIGR01813 61 DSPELFIKDTLKGGRGINDPELVRILAEESK-DAVDWLQDGVGA--RLD---DLIQLGGHSVPRAHRPTGGaaSGAEIVQ 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 139 TLFQTSLKYpQIQRFDEHFVLDILVDD-GQARGLVAlnMMEGTRVQIRAN-AVVMATGGAGR----VYRYN--------T 204
Cdd:TIGR01813 135 TLYKKAKKE-GIDTRLNSKVEDLIQDDqGSVVGVVV--KGKGKGIYIKAAkAVVLATGGFGSnkemIAKYDptlkhlgsT 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 205 NGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGS-GILMTEGCRGEGGILVNKDGYRYLQdygmgpetplgepknkym 283
Cdd:TIGR01813 212 NQPGATGDGLLMAEKIGAALVDMDYIQAHPTASPDEgGFLISEAVRGYGAILVNKTGERFMN------------------ 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 284 ELGPRDKVSQAFWHEwragrtiaTPRGDVVYLD---LRHLGE------KKLLERLPFICELAKAY--------------- 339
Cdd:TIGR01813 274 ELATRDKVSDAILAQ--------PGKDAYLIFDddvYKKAKMvdnyyrLGVAYKGDSLEELAKQFgipaaalkqtikdyn 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 340 ----VGVDP------------VKDP---IPVRPTAHYTMGGIETDQNCE------TRIKGLFAVGECSSvGLHGANRLGS 394
Cdd:TIGR01813 346 gyvaSGKDTpfgrpmdmptdlSKAPyyaIKVTPGVHHTMGGVKINTKAEvldangKPIPGLFAAGEVTG-GVHGANRLGG 424
|
410
....*....|....*
gi 742400114 395 NSLAELVVFGRVAGE 409
Cdd:TIGR01813 425 NAIADCIVFGRIAGE 439
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
61-412 |
2.66e-35 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 139.58 E-value: 2.66e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 61 DTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSrkpdgsvNVRRFGGMKIERTWFAADKT--GFHMLH 138
Cdd:PRK06481 122 DSNDKFYEETLKGGGGTNDKALLRYFVDNSASAIDWLDSMGIKLD-------NLTITGGMSEKRTHRPHDGSavGGYLVD 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 139 TLFQtSLKYPQIQRFDEHFVLDILVDDGQARGlVALNMMEGTRVQIRANAVVMATGGAGR----VYRYN--------TNG 206
Cdd:PRK06481 195 GLLK-NVQERKIPLFVNADVTKITEKDGKVTG-VKVKINGKETKTISSKAVVVTTGGFGAnkdmIAKYRpdlkgyvtTNQ 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 207 GIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYlqdygmgpetplgepknkYMELG 286
Cdd:PRK06481 273 EGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRF------------------GNELD 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 287 PRDKVSQAfwhewragrtIATPRGDVVYL-----------DLRHLGEKKLLERLPFICELAKAyVGV------------- 342
Cdd:PRK06481 335 TRDKVSAA----------INKLPEKYAYVvfdsgvkdrvkAIAQYEEKGFVEEGKTIDELAKK-INVpaetltktldtwn 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 343 DPVKD----------------------PIPVRPTAHYTMGGIETDQNCE------TRIKGLFAVGECSSvGLHGANRLGS 394
Cdd:PRK06481 404 KAVKNkkdeafgrttgmdndlstgpyyAIKIAPGIHYTMGGVKINTNTEvlkkdgSPITGLYAAGEVTG-GLHGENRIGG 482
|
410
....*....|....*...
gi 742400114 395 NSLAELVVFGRVAGEQAA 412
Cdd:PRK06481 483 NSVADIIIFGRQAGTQSA 500
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
26-565 |
1.64e-24 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 107.83 E-value: 1.64e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 26 EANPQLKIALISKVYPMRSHTVA--AEGGSAAVTQDHDTFDYHFHDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCP 103
Cdd:PRK08275 30 ERNPALRVLLLEKANVKRSGAISmgMDGLNNAVIPGHATPEQYTKEITIANDGIVDQKAVYAYAEHSFETIQQLDRWGVK 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 104 WSRKPDGSVNVRRFGGMKIertwFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVD-DGQARGLVALNMMEGTRV 182
Cdd:PRK08275 110 FEKDETGDYAVKKVHHMGS----YVLPMPEGHDIKKVLYRQLKRARVLITNRIMATRLLTDaDGRVAGALGFDCRTGEFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 183 QIRANAVVMATGGAGRV-----------YRYNTNggivTGDGMGMAFHHGVPLRDMEFVQYHP--TGLPGSGILMTEGcr 249
Cdd:PRK08275 186 VIRAKAVILCCGAAGRLglpasgylfgtYENPTN----AGDGYAMAYHAGAELANLECFQINPliKDYNGPACAYVTG-- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 250 GEGGILVNKDGYRYLQ-DYGMGpetplgepknkymelgprdKVSQAFWHEWRAGRtiaTPrgdvVYLDLRHLGE--KKLL 326
Cdd:PRK08275 260 PLGGYTANAKGERFIEcDYWSG-------------------QMMWEFYQELQSGN---GP----VFLKLDHLAEetIQTI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 327 ERLPFICE-----LAKAYVGVDPVKDPIPVRPTA-HYTMG----GIETDQNCETRIKGLFAVGECSSVGLhganrlgsNS 396
Cdd:PRK08275 314 ETILHTNErpsrgRFHEGRGTDYRQQMVEMHISEiGFCSGhsasGVWVNEKAETTVPGLYAAGDMASVPH--------NY 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 397 LAELVVFGRVAGEQAARRALETAPAngsALDAQtrDVETRLSNLMkqegnenwAKIRDEMGLS---MEegcgiYRTPEL- 472
Cdd:PRK08275 386 MLGAFTYGWFAGENAAEYVAGRDLP---EVDAA--QVEAERARVL--------APLHREDGLPpaqVE-----YKLRRLv 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 473 ------------MQKTIDKLAELKERFKRVNITDNSsvfntDLLYTIELGYGLDVAECMAHSAFNRKESRGA--HQRLDE 538
Cdd:PRK08275 448 ndylqppkvtrkMEIGLQRFAEIREDLERIKARDPH-----ELMRALEVSSIRDCAEMAARASLFRTESRWGlyHYRVDF 522
|
570 580
....*....|....*....|....*..
gi 742400114 539 gcTERDDVNFLKHTLAFHNPQGAPRLE 565
Cdd:PRK08275 523 --PERNDAEWFCHTHLRKDEDGRMVSF 547
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
178-412 |
1.68e-24 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 109.10 E-value: 1.68e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 178 EGTRVQIRANAVVMATGG--------------AGRVYRY-NTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGL----- 237
Cdd:PTZ00306 601 SGQVMDLLADAVILATGGfsndhtpnsllreyAPQLSGFpTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLidpkd 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 238 PG--SGILMTEGCRGEGGILVNKDGYRYLQDYGM-----------GPETP-LGEPKNKYMELGprDKVSQAF-------- 295
Cdd:PTZ00306 681 PSnrTKYLGPEALRGSGGVLLNKNGERFVNELDLrsvvsqaiiaqGNEYPgSGGSKFAYCVLN--EAAAKLFgknslgfy 758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 296 WHewRAG------------RTIATPRGDVvyldLRHLGEKKLLERLPFICELAKAYVGVDPVKDPIP-----VRPTAHYT 358
Cdd:PTZ00306 759 WK--RLGlfqrvddvkglaKLIGCPVENL----HRTLETYERLSTKKVACPLTGKVVFPCVVGTQGPyyvafVTPSIHYT 832
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 742400114 359 MGG--------IETDQNC----ETR--IKGLFAVGECSSvGLHGANRLGSNSLAELVVFGRVAGEQAA 412
Cdd:PTZ00306 833 MGGclispsaeMQMEDNSvnifEDRrpILGLFGAGEVTG-GVHGGNRLGGNSLLECVVFGKIAGDRAA 899
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
157-552 |
5.60e-18 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 87.67 E-value: 5.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 157 FVLDILVDDGQARGLVALNMMEGTRVQIRANAVVMATGGAGRVYRYNTNG---GIV------TGDGMGMAFHHGVPLRDM 227
Cdd:PRK06854 155 FITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRPRSPGegrGRMwyppfnTGSGYAMGIRAGAEMTTF 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 228 E--FVQ------YHPTGLPGSGIlmteGCRgeggiLVNKDGYRYlqdygMGPETPLGEPKNKYMELGP-----RDKvsqA 294
Cdd:PRK06854 235 EnrFIPlrfkdgYGPVGAWFLLF----KAK-----AVNALGEEY-----EAKNAAELKKYVPYADYKPiptclRNY---A 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 295 FWHEWRAGRTiatPrgdvVYLDLRHLGEKKLLERlpficELAKAYV-------------GVDPVKDPIPVRPTAHYTMGG 361
Cdd:PRK06854 298 TVEENKAGRG---P----IYMDTEEALQDKHLES-----ELWEDFLdmtpgqallwaaqNIEPEEENSEIMGTEPYIVGS 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 362 --------------IETDQNC-----ETRIKGLFAVGECSsvglhGAN--RLGSNSLAElvvfGRVAGEQAARRALETAp 420
Cdd:PRK06854 366 hsgasgywvsgpedWVPEEYKwgynrMTTVEGLFAAGDVV-----GGSphKFSSGSFAE----GRIAAKAAVRYILDNK- 435
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 421 ANGSALDAQTrdVETRLSNLMK--------------QEGNENWAKIRD-EMGLS--MEEGCG----IYRTPE-LMQKTID 478
Cdd:PRK06854 436 DEKPEIDDDQ--IEELKKEIYApleryeefkdystdPDVNPNYISPEQlEERLQkiMDEYAGgistNYTTNEkLLEIALE 513
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742400114 479 KLAELKERFKRVNITDNSsvfntDLLYTIELGYGLDVAECMAHSAFNRKESR--GAHQRLDEgcTERDDVNFLKHT 552
Cdd:PRK06854 514 LLEMLEEDSEKLAARDLH-----ELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADY--PGKDDENWKCFV 582
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
161-561 |
2.87e-15 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 79.51 E-value: 2.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 161 ILVDDGQARGLVALNMMEGTRVQIRANAVVMATGGAGRV------YRYNT-NGGIVTGDGMGMAFHHGVPLRDMEFVQYH 233
Cdd:PRK13800 169 VLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLglpasgYLYGTyENPTNAGDGYSMAYHAGAELSGIECFQIN 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 234 PTGLPGSGILMTEGCRGEGGILVNKDGYRYLQ-DYGMGpeTPLGEPKnkymelgprdkvsqafwhewragRTIATPRGDv 312
Cdd:PRK13800 249 PLIKDYNGPACAYVANPFGGYQVNAQGERFVDsDYWSG--QMMAEVK-----------------------REIESARGP- 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 313 VYLDLRHLGEKKL--LERLPFICELakayvgvdpvkdpiPVRPTAHYTMG------------------------GIETDQ 366
Cdd:PRK13800 303 IYLKVSHLPEETLsaLESILHTTER--------------PTRGTFHANRGhdyrthdiemhiseiglcsghsasGVWVDE 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 367 NCETRIKGLFAVGECSSVglhganrlGSNSLAELVVFGRVAGEQAARRALETaPANGSALDAQTRDVETRLSNLMKQEGN 446
Cdd:PRK13800 369 HARTTVPGLYAAGDLACV--------PHNYMIGAFVFGDLAGAHAAGTLAEV-PAPGELPADQLAEAHELIYRPLRHPDG 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 447 ENWAKIRDEMGLSMEEgcgiYRTPElmqKTIDKLAELKERFKRV--NITDNSSVFNTDLLYTIELGYGLDVAECMAHSAF 524
Cdd:PRK13800 440 PPQPQVEYKLRRFVND----YVAPP---KTAAKLSIAVETFERMaaEIAGMGARTPHELMRCAEVSFIRDCAEMAARSSL 512
|
410 420 430
....*....|....*....|....*....|....*....
gi 742400114 525 NRKESRGA--HQRLDegCTERDDVNFLKHTLAFHNPQGA 561
Cdd:PRK13800 513 TRTESRWGlyHDRAD--LPERDDASWGYHLNLRKGDDGE 549
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
161-415 |
4.55e-08 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 55.66 E-value: 4.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 161 ILVDDGQARGLVALNMmeGTRVQIRAN-AVVMATGGagrvYRYNtnggivtgdgmgmafhhgvplRDM------EFVQYH 233
Cdd:PRK07121 204 IVDDDGRVVGVEARRY--GETVAIRARkGVVLAAGG----FAMN---------------------REMvaryapAYAGGL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 234 PTGLP---GSGILMTEGCRGE--------------------GGILVNKDGYRYLQD---YGMGPETPLGEPKNKY----- 282
Cdd:PRK07121 257 PLGTTgddGSGIRLGQSAGGAtahmdqvfawrfiyppsallRGILVNARGQRFVNEdtyGARIGQFILEQPGGTAylivd 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 283 ---MELGPRDKVSQAFWhewragRTIATPRGDVVYLDLRHLG--EKKLLERLPFICELAKAyvGVDPV--KDP------- 348
Cdd:PRK07121 337 ealFEEARAQLRPQIDG------RTPGAWKAETVEELARKLGipPGGLQATVDAYNRAAAG--GEDPPfhKQPewlrpld 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 349 ------IPVR----PTAHYTMGGIETDQNCE-------TRIKGLFAVGECSsVGLHgANRLGSN-SLAELVVFGRVAGEQ 410
Cdd:PRK07121 409 tgpfaaIDLSlgkaPTPGFTLGGLRVDEDTGevlradgAPIPGLYAAGRCA-SGIA-SNGYVSGlSLADCSFFGRRAGRH 486
|
....*
gi 742400114 411 AARRA 415
Cdd:PRK07121 487 AAARA 491
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
350-419 |
9.66e-07 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 51.41 E-value: 9.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 350 PVRPTAHYTMGGIETDQNCE------TRIKGLFAVGEcssvgLHGANRLGSNSLAEL-----VVFGRVAGEQAARRALET 418
Cdd:PRK08274 390 PVRPGITFTYLGLKVDEDARvrfadgRPSPNLFAAGE-----MMAGNVLGKGYPAGVgltigAVFGRIAGEEAARHAQHE 464
|
.
gi 742400114 419 A 419
Cdd:PRK08274 465 A 465
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
360-428 |
9.96e-04 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 41.72 E-value: 9.96e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 360 GGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVF-GRVAGEQAARRALETAPANGSALDA 428
Cdd:COG0446 236 GWIKVDETLQTSDPDVYAAGDCAEVPHPVTGKTVYIPLASAANKqGRVAAENILGGPAPFPGLGTFISKV 305
|
|
| HAD_ThrH_like |
cd02607 |
bifunctional phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase, similar to ... |
425-507 |
3.50e-03 |
|
bifunctional phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase, similar to Pseudomonas aeruginosa ThrH; This family includes Pseudomonas aeruginosa ThrH which is a duel activity enzyme having both phosphoserine phosphatase and phosphoserine:homoserine phosphotransferase activities, i.e. it can dephosphorylate phosphoserine, and can transfer phosphate from phosphoserine to homoserine. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Pssm-ID: 319793 [Multi-domain] Cd Length: 195 Bit Score: 39.18 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742400114 425 ALDAQTRDVETrLSNLMKQEgnenwAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVNITDNSSVFNTDLL 504
Cdd:cd02607 28 ALKATTRDIPD-YDVLMKQR-----LRILDEHGLKLADIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLM 101
|
...
gi 742400114 505 YTI 507
Cdd:cd02607 102 RQL 104
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
358-413 |
7.83e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 39.01 E-value: 7.83e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742400114 358 TMGGIETDQNCE------TRIKGLFAVGECSSVG---LHGANRLGSNSLAELVVFGRVAGEQAAR 413
Cdd:COG3573 485 TLGGLQTDLDSRvldadgQPIPGLYAAGEAAGFGgggVHGYRALEGTFLGGCIFSGRAAGRAIAA 549
|
|
| GlpA |
COG0578 |
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate ... |
158-194 |
8.68e-03 |
|
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate dehydrogenase is part of the Pathway/BioSystem: Isoprenoid biosynthesis
Pssm-ID: 440343 [Multi-domain] Cd Length: 501 Bit Score: 38.96 E-value: 8.68e-03
10 20 30
....*....|....*....|....*....|....*..
gi 742400114 158 VLDILVDDGQARGLVALNMMEGTRVQIRANAVVMATG 194
Cdd:COG0578 159 VTGLLRDGGRVWGVTVRDRLTGEEFTVRARVVVNATG 195
|
|
| |
