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Conserved domains on  [gi|740851854|ref|WP_038637107|]
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MULTISPECIES: FAD-dependent oxidoreductase [Citrobacter]

Protein Classification

FAD-dependent oxidoreductase( domain architecture ID 11484595)

FAD-dependent oxidoreductase such as oxidoreductase FixC, which may be part of an electron transfer system required for anaerobic carnitine reduction

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
1-428 0e+00

putative oxidoreductase FixC; Provisional


:

Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 848.81  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFM 80
Cdd:PRK10157   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  81 TDNGAMTIDYCNGEEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILAD 160
Cdd:PRK10157  81 TEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 161 GVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTDGLMGGGFLYTNETTLSLGLVCG 240
Cdd:PRK10157 161 GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 241 LHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
Cdd:PRK10157 241 LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 321 ISAGEAAAKTVLSAMKRDDFSKQSLGEYRQHLDEGPMRDMRMYQKLPAFLDNPRMFTAYPEMAVSIARDLFTVDGSAPVP 400
Cdd:PRK10157 321 IAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPEL 400
                        410       420
                 ....*....|....*....|....*...
gi 740851854 401 MRKKILRHAKKVGFINLMKDGLKGVTVL 428
Cdd:PRK10157 401 MRKKILRHGKKVGFINLIKDGMKGVTVL 428
 
Name Accession Description Interval E-value
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
1-428 0e+00

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 848.81  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFM 80
Cdd:PRK10157   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  81 TDNGAMTIDYCNGEEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILAD 160
Cdd:PRK10157  81 TEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 161 GVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTDGLMGGGFLYTNETTLSLGLVCG 240
Cdd:PRK10157 161 GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 241 LHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
Cdd:PRK10157 241 LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 321 ISAGEAAAKTVLSAMKRDDFSKQSLGEYRQHLDEGPMRDMRMYQKLPAFLDNPRMFTAYPEMAVSIARDLFTVDGSAPVP 400
Cdd:PRK10157 321 IAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPEL 400
                        410       420
                 ....*....|....*....|....*...
gi 740851854 401 MRKKILRHAKKVGFINLMKDGLKGVTVL 428
Cdd:PRK10157 401 MRKKILRHGKKVGFINLIKDGMKGVTVL 428
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
13-354 7.77e-62

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 201.35  E-value: 7.77e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  13 AGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLyAHSLERIIPgFADQAPIERMITHEKLAFMTDNGAmTIDYcn 92
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP-LGLDEPLERPVRGARFYSPGGKSV-ELPP-- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  93 geeaaASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILADGVNSLLAEKLGM 172
Cdd:COG0644   76 -----GRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSLLARKLGL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 173 AKRVEA-SHVAVGVKELIELPKSVIEDrfqlqgnEGAACLFAGAPTDGlmGGGFLYT-NETTLSLGlvcglhhlkdakks 250
Cdd:COG0644  151 KRRSDEpQDYALAIKEHWELPPLEGVD-------PGAVEFFFGEGAPG--GYGWVFPlGDGRVSVG-------------- 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 251 vpqmledfkqhpavapliaggklveyaahvVPEAGmnMQPELVGDGVLIAGDAAGMCMnlGFTIRGMDLAISAGEAAAKT 330
Cdd:COG0644  208 ------------------------------IPLGG--PRPRLVGDGVLLVGDAAGFVD--PLTGEGIHLAMKSGRLAAEA 253
                        330       340
                 ....*....|....*....|....
gi 740851854 331 VLSAMKRDDFSKQSLGEYRQHLDE 354
Cdd:COG0644  254 IAEALEGGDFSAEALAEYERRLRE 277
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
6-331 1.91e-25

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 105.09  E-value: 1.91e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGrlyahslerIIPGFADQAPIErmithEKLAFMTDNGA 85
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGA---------LSPRALEELDLP-----GELIVNLVRGA 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   86 MTIDYcNGEEAAASQ---VSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDI-LEAKVVILADG 161
Cdd:TIGR02032  67 RFFSP-NGDSVEIPIeteLAYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGSEGtVTAKIVIGADG 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  162 VNSLLAEKLGMakRVEASHVAVGVKELIELPkSVIEDRFQLQgnegaacLFAGaptDGLMGGGFLYT---NETTLSLGLV 238
Cdd:TIGR02032 146 SRSIVAKKLGL--KKEPREYGVAARAEVEMP-DEEVDEDFVE-------VYID---RGIVPGGYGWVfpkGDGTANVGVG 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  239 CGLH-HLKDAKKsvpqMLEDF-KQHPAvaplIAGGKLVEYAAHVVPeAGMNMQPeLVGDGVLIAGDAAGMCMnlGFTIRG 316
Cdd:TIGR02032 213 SRSAeEGEDPKK----YLKDFlARRPE----LKDAETVEVCGALIP-IGRPDEK-LVRGNVLLVGDAAGHVN--PLTGEG 280
                         330
                  ....*....|....*
gi 740851854  317 MDLAISAGEAAAKTV 331
Cdd:TIGR02032 281 IYYAMRSGDIAAEVV 295
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
7-157 3.76e-10

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 61.47  E-value: 3.76e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAkNVTGG------RLYAHSlERIIPGFADQapiermitheklaFM 80
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGG-MLTSGlvgpdmGFYLNK-EQVVGGIARE-------------FR 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   81 TDNGAMTiDYCNGEEAAASQVSY--SVLRSKFDAWLmeqaEEAGAQLITGIRVDNVVQREGKVVGVEADGD----ILEAK 154
Cdd:pfam12831  66 QRLRARG-GLPGPYGLRGGWVPFdpEVAKAVLDEML----AEAGVTVLLHTRVVGVVKEGGRITGVTVETKggriTIRAK 140

                  ...
gi 740851854  155 VVI 157
Cdd:pfam12831 141 VFI 143
 
Name Accession Description Interval E-value
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
1-428 0e+00

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 848.81  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFM 80
Cdd:PRK10157   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  81 TDNGAMTIDYCNGEEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILAD 160
Cdd:PRK10157  81 TEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 161 GVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTDGLMGGGFLYTNETTLSLGLVCG 240
Cdd:PRK10157 161 GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 241 LHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
Cdd:PRK10157 241 LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 321 ISAGEAAAKTVLSAMKRDDFSKQSLGEYRQHLDEGPMRDMRMYQKLPAFLDNPRMFTAYPEMAVSIARDLFTVDGSAPVP 400
Cdd:PRK10157 321 IAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPEL 400
                        410       420
                 ....*....|....*....|....*...
gi 740851854 401 MRKKILRHAKKVGFINLMKDGLKGVTVL 428
Cdd:PRK10157 401 MRKKILRHGKKVGFINLIKDGMKGVTVL 428
PRK10015 PRK10015
oxidoreductase; Provisional
1-428 0e+00

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 599.27  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFM 80
Cdd:PRK10015   1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  81 TDNGAMTIDYCNGEEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILAD 160
Cdd:PRK10015  81 TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 161 GVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTDGLMGGGFLYTNETTLSLGLVCG 240
Cdd:PRK10015 161 GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 241 LHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320
Cdd:PRK10015 241 LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 321 ISAGEAAAKTVLSAMKRDDFSKQSLGEYRQHLDE-GPMRDMRMYQKLPAFLDNPRMFTAYPEMAVSIARDLFTVDGSAPV 399
Cdd:PRK10015 321 IASAQAAATTVIAAKERADFSASSLAQYKRELEQsCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQ 400
                        410       420
                 ....*....|....*....|....*....
gi 740851854 400 PMRKKILRHAKKVGFINLMKDGLKGVTVL 428
Cdd:PRK10015 401 PVRKMIMGHAKKIGLINLLKDGIKGATAL 429
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
13-354 7.77e-62

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 201.35  E-value: 7.77e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  13 AGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLyAHSLERIIPgFADQAPIERMITHEKLAFMTDNGAmTIDYcn 92
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP-LGLDEPLERPVRGARFYSPGGKSV-ELPP-- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  93 geeaaASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILADGVNSLLAEKLGM 172
Cdd:COG0644   76 -----GRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSLLARKLGL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 173 AKRVEA-SHVAVGVKELIELPKSVIEDrfqlqgnEGAACLFAGAPTDGlmGGGFLYT-NETTLSLGlvcglhhlkdakks 250
Cdd:COG0644  151 KRRSDEpQDYALAIKEHWELPPLEGVD-------PGAVEFFFGEGAPG--GYGWVFPlGDGRVSVG-------------- 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854 251 vpqmledfkqhpavapliaggklveyaahvVPEAGmnMQPELVGDGVLIAGDAAGMCMnlGFTIRGMDLAISAGEAAAKT 330
Cdd:COG0644  208 ------------------------------IPLGG--PRPRLVGDGVLLVGDAAGFVD--PLTGEGIHLAMKSGRLAAEA 253
                        330       340
                 ....*....|....*....|....
gi 740851854 331 VLSAMKRDDFSKQSLGEYRQHLDE 354
Cdd:COG0644  254 IAEALEGGDFSAEALAEYERRLRE 277
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
6-331 1.91e-25

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 105.09  E-value: 1.91e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGrlyahslerIIPGFADQAPIErmithEKLAFMTDNGA 85
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGA---------LSPRALEELDLP-----GELIVNLVRGA 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   86 MTIDYcNGEEAAASQ---VSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDI-LEAKVVILADG 161
Cdd:TIGR02032  67 RFFSP-NGDSVEIPIeteLAYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGSEGtVTAKIVIGADG 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  162 VNSLLAEKLGMakRVEASHVAVGVKELIELPkSVIEDRFQLQgnegaacLFAGaptDGLMGGGFLYT---NETTLSLGLV 238
Cdd:TIGR02032 146 SRSIVAKKLGL--KKEPREYGVAARAEVEMP-DEEVDEDFVE-------VYID---RGIVPGGYGWVfpkGDGTANVGVG 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  239 CGLH-HLKDAKKsvpqMLEDF-KQHPAvaplIAGGKLVEYAAHVVPeAGMNMQPeLVGDGVLIAGDAAGMCMnlGFTIRG 316
Cdd:TIGR02032 213 SRSAeEGEDPKK----YLKDFlARRPE----LKDAETVEVCGALIP-IGRPDEK-LVRGNVLLVGDAAGHVN--PLTGEG 280
                         330
                  ....*....|....*
gi 740851854  317 MDLAISAGEAAAKTV 331
Cdd:TIGR02032 281 IYYAMRSGDIAAEVV 295
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
6-173 3.80e-18

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 84.99  E-value: 3.80e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGaknvTGGRLYAHS------LERIipGFADQ-----APIERMITH 74
Cdd:COG0654    4 TDVLIVGGGPAGLALALALARAGIRVTVVERAPPPR----PDGRGIALSprslelLRRL--GLWDRllargAPIRGIRVR 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  75 EKLafmTDNGAMTIDYcngeEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAK 154
Cdd:COG0654   78 DGS---DGRVLARFDA----AETGLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTLADGRTLRAD 150
                        170
                 ....*....|....*....
gi 740851854 155 VVILADGVNSLLAEKLGMA 173
Cdd:COG0654  151 LVVGADGARSAVRRLLGIG 169
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
6-161 3.26e-13

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 71.02  E-value: 3.26e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIE-----RGNSA---GAKNVTGGRL-----------YAHSLERIIPGFADQA 66
Cdd:COG1053    4 YDVVVVGSGGAGLRAALEAAEAGLKVLVLEkvpprGGHTAaaqGGINAAGTNVqkaagedspeeHFYDTVKGGDGLADQD 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  67 PIERMITH--EKLAFMTDNGamtIDYCNGEEAAASQV-SYSVLRSKFDAW---------LMEQAEEAGAQLITGIRVDNV 134
Cdd:COG1053   84 LVEALAEEapEAIDWLEAQG---VPFSRTPDGRLPQFgGHSVGRTCYAGDgtghallatLYQAALRLGVEIFTETEVLDL 160
                        170       180       190
                 ....*....|....*....|....*....|..
gi 740851854 135 VQREGKVVGVEA---DGDI--LEAKVVILADG 161
Cdd:COG1053  161 IVDDGRVVGVVArdrTGEIvrIRAKAVVLATG 192
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
7-171 4.36e-13

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 69.93  E-value: 4.36e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSA-GAKNVTGG---------------RLYAHSLERiIPGFADQAPIER 70
Cdd:COG0665    4 DVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGsGASGRNAGqlrpglaaladralvRLAREALDL-WRELAAELGIDC 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  71 MITH-----------------EKLAFMTDNGaMTIDYCNGEEAAA------SQVSYSVLRSKFDAW---------LMEQA 118
Cdd:COG0665   83 DFRRtgvlylarteaelaalrAEAEALRALG-LPVELLDAAELRErepglgSPDYAGGLYDPDDGHvdpaklvraLARAA 161
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 740851854 119 EEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILADGVNS-LLAEKLG 171
Cdd:COG0665  162 RAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSaRLLPMLG 215
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
2-174 2.99e-10

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 61.70  E-value: 2.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   2 SEDIFDAIIVGAGLAG-SVAALVLAREGAQVLVIERGNSAGA------------------------KNVTGGRLYAH-SL 55
Cdd:COG0579    1 MMEMYDVVIIGAGIVGlALARELSRYEDLKVLVLEKEDDVAQessgnnsgvihaglyytpgslkarLCVEGNELFYElCR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  56 ERIIP----G---FA-DQAPIERMitHEKLAFMTDNGAMTIDYCNGEEA------------AASQV-------SYSVLRS 108
Cdd:COG0579   81 ELGIPfkrcGklvVAtGEEEVAFL--EKLYERGKANGVPGLEILDREELrelepllsdegvAALYSpstgivdPGALTRA 158
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740851854 109 kfdawLMEQAEEAGAQLITGIRVDNVVQREGKVVgVEADGDILEAKVVILADGVNSL-LAEKLGMAK 174
Cdd:COG0579  159 -----LAENAEANGVELLLNTEVTGIEREGDGWE-VTTNGGTIRARFVINAAGLYADrLAQMAGIGK 219
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
7-198 3.29e-10

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 61.67  E-value: 3.29e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAG------AKNVTGGRLYAHSleRIIPG------FADQapiermith 74
Cdd:COG2509   32 DVVIVGAGPAGLFAALELAEAGLKPLVLERGKDVEertcpvAEFWRKGKCNPES--NIQFGeggagtFSDG--------- 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  75 eKLAFMTDNGAMTIDYCNGE--EAAA-------------SQVSYSVLRSkfdawLMEQAEEAGAQLITGIRVDNVVQREG 139
Cdd:COG2509  101 -KLNTRSKDPQGLIRYVLEIfvKFGApeeilyaakphigTDKLPKVVKN-----IREYIEELGGEIRFNTRVTDILIEDG 174
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 740851854 140 KVVGVE-ADGDILEAKVVILADG------VNSLLAEKLGMakrvEASHVAVGVKelIELPKSVIED 198
Cdd:COG2509  175 RVKGVVtNDGEEIEADAVILAPGhsardwFEMLHRLGVKL----EAKPFDIGVR--VEHPQELIDR 234
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
7-157 3.76e-10

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 61.47  E-value: 3.76e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAkNVTGG------RLYAHSlERIIPGFADQapiermitheklaFM 80
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGG-MLTSGlvgpdmGFYLNK-EQVVGGIARE-------------FR 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   81 TDNGAMTiDYCNGEEAAASQVSY--SVLRSKFDAWLmeqaEEAGAQLITGIRVDNVVQREGKVVGVEADGD----ILEAK 154
Cdd:pfam12831  66 QRLRARG-GLPGPYGLRGGWVPFdpEVAKAVLDEML----AEAGVTVLLHTRVVGVVKEGGRITGVTVETKggriTIRAK 140

                  ...
gi 740851854  155 VVI 157
Cdd:pfam12831 141 VFI 143
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
7-178 7.36e-10

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 60.10  E-value: 7.36e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAG-------AKNVTGG----------RLYAHSLER---------IIP 60
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGsgasgrnAGLIHPGlrylepselaRLALEALDLweeleeelgIDC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   61 GF--------ADQAPIERMitHEKLAFMTDNGA----MTIDYCNGEEAAASQVSYSVL--------RSKFDAWLMEQAEE 120
Cdd:pfam01266  81 GFrrcgvlvlARDEEEEAL--EKLLAALRRLGVpaelLDAEELRELEPLLPGLRGGLFypdgghvdPARLLRALARAAEA 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 740851854  121 AGAQLITGIRVDNvVQREGKVVGVEADGdilEAKVVILADGVNSLLAEKLGMAKRVEA 178
Cdd:pfam01266 159 LGVRIIEGTEVTG-IEEEGGVWGVVTTG---EADAVVNAAGAWADLLALPGLRLPVRP 212
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
7-311 1.02e-09

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 59.65  E-value: 1.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAgAKNVTGGRLYAHSLERIipgfaDQAPIERMI-----THEKLAFMT 81
Cdd:pfam01494   3 DVLIVGGGPAGLMLALLLARAGVRVVLVERHATT-SVLPRAHGLNQRTMELL-----RQAGLEDRIlaegvPHEGMGLAF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   82 DNGAMTIDYcnGEEAAASQVsYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGV---EADGDI--LEAKVV 156
Cdd:pfam01494  77 YNTRRRADL--DFLTSPPRV-TVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVvrdRRDGEEytVRAKYL 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  157 ILADGVNSLLAEKLGMAKRVEASHVA--VGVKELIELPKSVIEDRFQLqgnegaaCLFAGAPTDGLMgggFLYTNETTLS 234
Cdd:pfam01494 154 VGCDGGRSPVRKTLGIEFEGFEGVPFgsLDVLFDAPDLSDPVERAFVH-------YLIYAPHSRGFM---VGPWRSAGRE 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  235 LGLVCGLHHLKDAKKSVPQMLEDFKQ--HPAVAPLIAGGKLVEYAAhvvpeAGMN--MQPELVGDGVLIAGDAA------ 304
Cdd:pfam01494 224 RYYVQVPWDEEVEERPEEFTDEELKQrlRSIVGIDLALVEILWKSI-----WGVAsrVATRYRKGRVFLAGDAAhihppt 298

                  ....*...
gi 740851854  305 -GMCMNLG 311
Cdd:pfam01494 299 gGQGLNTA 306
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
6-62 3.32e-09

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 58.71  E-value: 3.32e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAgaknvtGGRlyAHSLERiiPGF 62
Cdd:COG1233    4 YDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTP------GGR--ARTFER--PGF 50
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
6-172 4.20e-08

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 54.36  E-value: 4.20e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNsagaknvTGGRLYAhsLERI--IPGFADQapiermitheklafmtdn 83
Cdd:COG0492    1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGGE-------PGGQLAT--TKEIenYPGFPEG------------------ 53
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  84 gamtidyCNGEEAAASqvsysvlrskfdawLMEQAEEAGAQLITGiRVDNvVQREGKVVGVE-ADGDILEAKVVILADGV 162
Cdd:COG0492   54 -------ISGPELAER--------------LREQAERFGAEILLE-EVTS-VDKDDGPFRVTtDDGTEYEAKAVIIATGA 110
                        170
                 ....*....|
gi 740851854 163 NsllAEKLGM 172
Cdd:COG0492  111 G---PRKLGL 117
PRK06185 PRK06185
FAD-dependent oxidoreductase;
1-173 6.51e-08

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 54.48  E-value: 6.51e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIE---------RGNSagaknvtggrLYAHSLE-----RIIPGFAdQA 66
Cdd:PRK06185   2 AEVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEkhadflrdfRGDT----------VHPSTLElmdelGLLERFL-EL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  67 PIERMithEKLAFMTDNGAMTIdycngeeaaasqVSYSVLRSKFD-AWLMEQ-------AEEAGA----QLITGIRVDNV 134
Cdd:PRK06185  71 PHQKV---RTLRFEIGGRTVTL------------ADFSRLPTPYPyIAMMPQwdfldflAEEASAypnfTLRMGAEVTGL 135
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 740851854 135 VQREGKVVGVEA---DGDI-LEAKVVILADGVNSLLAEKLGMA 173
Cdd:PRK06185 136 IEEGGRVTGVRArtpDGPGeIRADLVVGADGRHSRVRALAGLE 178
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
7-161 1.67e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 53.06  E-value: 1.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLAREGAQVLVIE-----RGNSA---------GAKNVTGGR---LYAHSLERIIPGFADQAPIE 69
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEkgqpfGGATAwssggidalGNPPQGGIDspeLHPTDTLKGLDELADHPYVE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   70 RMITH--EKLAFMTDNGAMTIDYCN--------GEEAAASQVSYSVLRSKFDAW--------LMEQAEEAGAQLITGIRV 131
Cdd:pfam00890  81 AFVEAapEAVDWLEALGVPFSRTEDghldlrplGGLSATWRTPHDAADRRRGLGtghallarLLEGLRKAGVDFQPRTAA 160
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 740851854  132 DNVVQREGKVVGVEA----DGDILEAKV---VILADG 161
Cdd:pfam00890 161 DDLIVEDGRVTGAVVenrrNGREVRIRAiaaVLLATG 197
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
6-173 1.96e-07

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 52.65  E-value: 1.96e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIE-RGNSAGAKNVTGGRLYAHS------LERIipGFADQAPIERMITHEKLA 78
Cdd:PRK07608   6 FDVVVVGGGLVGASLALALAQSGLRVALLApRAPPRPADDAWDSRVYAISpssqafLERL--GVWQALDAARLAPVYDMR 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  79 FMTDNGAmTIDYcNGEEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVIL 158
Cdd:PRK07608  84 VFGDAHA-RLHF-SAYQAGVPQLAWIVESSLIERALWAALRFQPNLTWFPARAQGLEVDPDAATLTLADGQVLRADLVVG 161
                        170
                 ....*....|....*
gi 740851854 159 ADGVNSLLAEKLGMA 173
Cdd:PRK07608 162 ADGAHSWVRSQAGIK 176
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
10-41 5.73e-07

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 46.37  E-value: 5.73e-07
                          10        20        30
                  ....*....|....*....|....*....|..
gi 740851854   10 IVGAGLAGSVAALVLAREGAQVLVIERGNSAG 41
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLG 32
PRK08163 PRK08163
3-hydroxybenzoate 6-monooxygenase;
8-182 7.05e-07

3-hydroxybenzoate 6-monooxygenase;


Pssm-ID: 181262 [Multi-domain]  Cd Length: 396  Bit Score: 51.19  E-value: 7.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   8 AIIVGAGLAGSVAALVLAREGAQVLVIERGNS---AGAKNVTGGRLYaHSLERIipGFADQApiermithEKLAFMTDNG 84
Cdd:PRK08163   7 VLIVGGGIGGLAAALALARQGIKVKLLEQAAEigeIGAGIQLGPNAF-SALDAL--GVGEAA--------RQRAVFTDHL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  85 AMtIDYCNGEEAAASQVS----------YSVL-RSKFDAWLMEQAEEAG-AQLITGIRVDNVVQREGKVVGVEADGDILE 152
Cdd:PRK08163  76 TM-MDAVDAEEVVRIPTGqafrarfgnpYAVIhRADIHLSLLEAVLDHPlVEFRTSTHVVGIEQDGDGVTVFDQQGNRWT 154
                        170       180       190
                 ....*....|....*....|....*....|.
gi 740851854 153 AKVVILADGVNSLLAEKL-GMAKRVeASHVA 182
Cdd:PRK08163 155 GDALIGCDGVKSVVRQSLvGDAPRV-TGHVV 184
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
7-53 2.61e-06

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 49.84  E-value: 2.61e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIER---------GNSAGA-------KNVTGGRLYAH 53
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGWQVTLYEAdeapaqgasGNRQGAlypllskDDNALSRFFRA 324
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
1-40 2.80e-06

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 49.41  E-value: 2.80e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSA 40
Cdd:COG3573    1 MAAMDADVIVVGAGLAGLVAAAELADAGRRVLLLDQEPEA 40
PRK09126 PRK09126
FAD-dependent hydroxylase;
6-173 5.49e-06

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 48.40  E-value: 5.49e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGN-SAGAKNVTGGR---LYAHSLE---------RIIPgfADQAPIErmi 72
Cdd:PRK09126   4 SDIVVVGAGPAGLSFARSLAGSGLKVTLIERQPlAALADPAFDGReiaLTHASREilqrlgawdRIPE--DEISPLR--- 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  73 tHEKLAFMTDNGAMTIDYCN-GEEAAASQVS-YSVLRSKFDAwlmeQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDI 150
Cdd:PRK09126  79 -DAKVLNGRSPFALTFDARGrGADALGYLVPnHLIRRAAYEA----VSQQDGIELLTGTRVTAVRTDDDGAQVTLANGRR 153
                        170       180
                 ....*....|....*....|...
gi 740851854 151 LEAKVVILADGVNSLLAEKLGMA 173
Cdd:PRK09126 154 LTARLLVAADSRFSATRRQLGIG 176
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
6-161 1.13e-05

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 47.56  E-value: 1.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIER-------GNSAgaknVTGGRLYAHS------------------LERIIP 60
Cdd:PRK08274   5 VDVLVIGGGNAALCAALAAREAGASVLLLEAaprewrgGNSR----HTRNLRCMHDapqdvlvgaypeeefwqdLLRVTG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  61 GFADQAPIERMIT--HEKLAFMTDNGAmtidycNGEEAAASQVSYSVLRSKFdaW-----LMEQ----AEEAGAQLITGI 129
Cdd:PRK08274  81 GRTDEALARLLIResSDCRDWMRKHGV------RFQPPLSGALHVARTNAFF--WgggkaLVNAlyrsAERLGVEIRYDA 152
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 740851854 130 RVDNVVQREGKVVGVEA-----DGDILEAKVVILADG 161
Cdd:PRK08274 153 PVTALELDDGRFVGARAgsaagGAERIRAKAVVLAAG 189
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
6-40 1.32e-05

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 47.15  E-value: 1.32e-05
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSA 40
Cdd:PRK05329   3 FDVLVIGGGLAGLTAALAAAEAGKRVALVAKGQGA 37
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
6-173 1.37e-05

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 46.90  E-value: 1.37e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVL--AREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGF------ADQA-PIERM-ITHE 75
Cdd:PRK07333   2 CDVVIAGGGYVGLALAVALkqAAPHLPVTVVDAAPAGAWSRDPRASAIAAAARRMLEALgvwdeiAPEAqPITDMvITDS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  76 KLAFMTDNGAMTIDycnGEEAAASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKV 155
Cdd:PRK07333  82 RTSDPVRPVFLTFE---GEVEPGEPFAHMVENRVLINALRKRAEALGIDLREATSVTDFETRDEGVTVTLSDGSVLEARL 158
                        170
                 ....*....|....*...
gi 740851854 156 VILADGVNSLLAEKLGMA 173
Cdd:PRK07333 159 LVAADGARSKLRELAGIK 176
PRK06847 PRK06847
hypothetical protein; Provisional
7-164 1.45e-05

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 46.79  E-value: 1.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERG---NSAGAK-NVTGGRLYAhsLERIipGFADQApIERMITHEKLAFMTD 82
Cdd:PRK06847   6 KVLIVGGGIGGLSAAIALRRAGIAVDLVEIDpewRVYGAGiTLQGNALRA--LREL--GVLDEC-LEAGFGFDGVDLFDP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  83 NGAMtIDYCNGEEAAASQV--SYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILAD 160
Cdd:PRK06847  81 DGTL-LAELPTPRLAGDDLpgGGGIMRPALARILADAARAAGADVRLGTTVTAIEQDDDGVTVTFSDGTTGRYDLVVGAD 159

                 ....
gi 740851854 161 GVNS 164
Cdd:PRK06847 160 GLYS 163
GIDA pfam01134
Glucose inhibited division protein A;
7-161 1.60e-05

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 46.78  E-value: 1.60e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLAREGAQVLviergnsagaknvtggrLYAHSLERIipgfadqapiermitheklAFMTDNGAM 86
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVL-----------------LITHNTDTI-------------------AELSCNPSI 44
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   87 ----------TIDYCNGE--EAA-ASQVSYSVL-RSKFDA-W-LMEQAEEAG-AQLITGI------------RVDNVVQR 137
Cdd:pfam01134  45 ggiakghlvrEIDALGGLmgKAAdKTGIQFRMLnTSKGPAvRaLRAQVDRDLySKEMTETlenhpnltliqgEVTDLIPE 124
                         170       180
                  ....*....|....*....|....*
gi 740851854  138 EGKVVGVE-ADGDILEAKVVILADG 161
Cdd:pfam01134 125 NGKVKGVVtEDGEEYKAKAVVLATG 149
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
7-51 1.65e-05

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 46.84  E-value: 1.65e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIErgnsagAKNVTGGRLY 51
Cdd:COG1231    9 DVVIVGAGLAGLAAARELRKAGLDVTVLE------ARDRVGGRVW 47
PRK07121 PRK07121
FAD-binding protein;
7-52 2.15e-05

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 46.42  E-value: 2.15e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSA-GAKNVTGGRLYA 52
Cdd:PRK07121  22 DVVVVGFGAAGACAAIEAAAAGARVLVLERAAGAgGATALSGGVIYL 68
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
2-37 2.67e-05

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 46.36  E-value: 2.67e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 740851854   2 SEDIFDAIIVGAGLAGSVAALVLAR-EGAQVLVIERG 37
Cdd:COG2303    1 MLEEYDYVIVGAGSAGCVLANRLSEdAGLRVLLLEAG 37
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
1-175 2.84e-05

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 46.05  E-value: 2.84e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIergnsAGAKNVTGGRLYA------HSLER--IIPGFADQApiermi 72
Cdd:PRK07494   3 MEKEHTDIAVIGGGPAGLAAAIALARAGASVALV-----APEPPYADLRTTAllgpsiRFLERlgLWARLAPHA------ 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  73 thEKLAFM--TDNG-----AMTIDYcngeeaAASQVSYSVLRSKFDAW-LMEQAEEAGAQLITGIRVD----NVVQREGK 140
Cdd:PRK07494  72 --APLQSMriVDATgrlirAPEVRF------RAAEIGEDAFGYNIPNWlLNRALEARVAELPNITRFGdeaeSVRPREDE 143
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 740851854 141 VVGVEADGDILEAKVVILADGVNSLLAEKLGMAKR 175
Cdd:PRK07494 144 VTVTLADGTTLSARLVVGADGRNSPVREAAGIGVR 178
GMC_oxred_N pfam00732
GMC oxidoreductase; This family of proteins bind FAD as a cofactor.
112-175 3.40e-05

GMC oxidoreductase; This family of proteins bind FAD as a cofactor.


Pssm-ID: 366272 [Multi-domain]  Cd Length: 218  Bit Score: 44.58  E-value: 3.40e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740851854  112 AWLMeQAEEAGAQLITGIRVDNVV--QREGKVVGVEA-DGD------ILEAKVVILADG-VNS---LLAEKLGMAKR 175
Cdd:pfam00732 132 TWLR-PALERNLRILTGAKAEKIIilGRGGRAVGVEArDGGggikrlITAAKEVVVAAGaLNTpplLLRSGLGKNPH 207
PRK07364 PRK07364
FAD-dependent hydroxylase;
6-171 3.63e-05

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 45.78  E-value: 3.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAknVTGGRLYAHSL--ERIIPGFADQAPIERMITHEKLAFMTDN 83
Cdd:PRK07364  19 YDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAEAA--AAKGQAYALSLlsARIFEGIGVWEKILPQIGKFRQIRLSDA 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  84 -------------GAMTIDYCnGEEAAASQVSYSVLRSKFD-AWLMEqaeeagAQLITgirvdNVVQREGKVVGVEADGD 149
Cdd:PRK07364  97 dypgvvkfqptdlGTEALGYV-GEHQVLLEALQEFLQSCPNiTWLCP------AEVVS-----VEYQQDAATVTLEIEGK 164
                        170       180
                 ....*....|....*....|....
gi 740851854 150 I--LEAKVVILADGVNSLLAEKLG 171
Cdd:PRK07364 165 QqtLQSKLVVAADGARSPIRQAAG 188
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
7-161 6.89e-05

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 44.00  E-value: 6.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAGSVAALVLARE-GAQVLVIERGNSAGAKNVTGGRLYAhsleriipgfadqAPIERMITHEklaFMTDNGA 85
Cdd:pfam01946  19 DVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSPGGGAWLGGQLFS-------------AMVVRKPAHL---FLDEFGI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   86 MTIDYCNGeeaaaSQVSYSVLrskFDAWLMEQA-EEAGAQLITGIRVDNVVQREGKVV-------------GVEADGDIL 151
Cdd:pfam01946  83 PYEDEGDY-----VVVKHAAL---FTSTLMSKAlQLPNVKLFNATSVEDLIVRPGVGVagvvtnwtlveqaGLHMDPNTI 154
                         170
                  ....*....|
gi 740851854  152 EAKVVILADG 161
Cdd:pfam01946 155 RAKVVVSATG 164
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
1-41 8.94e-05

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 44.38  E-value: 8.94e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAG 41
Cdd:PRK05249   1 MHMYDYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRNVG 41
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
1-36 9.66e-05

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 44.20  E-value: 9.66e-05
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIER 36
Cdd:PRK08020   1 MTNQPTDIAIVGGGMVGAALALGLAQHGFSVAVLEH 36
PTZ00367 PTZ00367
squalene epoxidase; Provisional
6-36 1.23e-04

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 44.46  E-value: 1.23e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIER 36
Cdd:PTZ00367  34 YDVIIVGGSIAGPVLAKALSKQGRKVLMLER 64
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
7-40 1.75e-04

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 43.73  E-value: 1.75e-04
                         10        20        30
                 ....*....|....*....|....*....|....
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSA 40
Cdd:PRK12834   6 DVIVVGAGLAGLVAAAELADAGKRVLLLDQENEA 39
PRK06370 PRK06370
FAD-containing oxidoreductase;
6-37 1.96e-04

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 43.65  E-value: 1.96e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERG 37
Cdd:PRK06370   6 YDAIVIGAGQAGPPLAARAAGLGMKVALIERG 37
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
6-38 2.05e-04

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 43.54  E-value: 2.05e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGN 38
Cdd:COG1249    4 YDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGR 36
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
7-41 3.20e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 42.90  E-value: 3.20e-04
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAG 41
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVG 37
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
7-41 5.39e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 42.15  E-value: 5.39e-04
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAG 41
Cdd:COG3349    5 RVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLG 39
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
6-38 6.08e-04

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 41.53  E-value: 6.08e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 740851854    6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGN 38
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEG 33
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
1-36 6.56e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 41.94  E-value: 6.56e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIER 36
Cdd:PRK07843   3 MTVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEK 38
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
6-38 9.24e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 41.32  E-value: 9.24e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGN 38
Cdd:PRK06292   4 YDVIVIGAGPAGYVAARRAAKLGKKVALIEKGP 36
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-41 1.04e-03

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 41.00  E-value: 1.04e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAG 41
Cdd:COG2072    2 AATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVG 42
PRK07233 PRK07233
hypothetical protein; Provisional
10-41 1.46e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 40.64  E-value: 1.46e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 740851854  10 IVGAGLAGSVAALVLAREGAQVLVIERGNSAG 41
Cdd:PRK07233   4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQLG 35
PRK12843 PRK12843
FAD-dependent oxidoreductase;
6-36 1.82e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 40.49  E-value: 1.82e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVIER 36
Cdd:PRK12843  17 FDVIVIGAGAAGMSAALFAAIAGLKVLLVER 47
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-159 1.95e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 40.32  E-value: 1.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   1 MSEDIFDAIIVGAGLAGSVAALVLAR---EGAQVLVIERGNSAGAKNVTGGRLYAHSLeriipgfadQAPIERM--ITHE 75
Cdd:COG4529    1 MTGARKRIAIIGGGASGTALAIHLLRrapEPLRITLFEPRPELGRGVAYSTDSPEHLL---------NVPAGRMsaFPDD 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  76 KLAFmtdngamtIDYCNGEEAAASQV-------------SYsvLRSKFDAWLMEQAEEAGAQLITGiRVDNVVQREGKVV 142
Cdd:COG4529   72 PDHF--------LRWLRENGARAAPAidpdafvprrlfgEY--LRERLAEALARAPAGVRLRHIRA-EVVDLERDDGGYR 140
                        170
                 ....*....|....*..
gi 740851854 143 GVEADGDILEAKVVILA 159
Cdd:COG4529  141 VTLADGETLRADAVVLA 157
PLN02985 PLN02985
squalene monooxygenase
7-36 2.01e-03

squalene monooxygenase


Pssm-ID: 178566 [Multi-domain]  Cd Length: 514  Bit Score: 40.27  E-value: 2.01e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 740851854   7 DAIIVGAGLAGSVAALVLAREGAQVLVIER 36
Cdd:PLN02985  45 DVIIVGAGVGGSALAYALAKDGRRVHVIER 74
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
7-165 2.34e-03

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 40.09  E-value: 2.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854    7 DAIIVGAGLAG-SVAA-LVLAREGAQVLVIErgnsAGAKNVTGGRlYAHSLEriipgFADQAPIERMITHeklafmtdNG 84
Cdd:pfam05834   1 DVVIIGAGPAGlSLAArLAAAKPGLSVVLIE----PGPSLLRPNN-YVWSDE-----FEDLGALEDCVGH--------SW 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   85 AMTIDYCNGEEAAASQVSY-SVLRSKFDAWLMEQAEEAGAQLITGiRVDNVVQRE-GKVVGVEADGDILEAKVVILADGV 162
Cdd:pfam05834  63 PGTRVHFDDGKPILIGRAYgRVSSKRLEEEMLQRCVENGVIRLNA-KVESVEADPvGESLVVCEGGRTIRARLVFDARGL 141

                  ...
gi 740851854  163 NSL 165
Cdd:pfam05834 142 GSL 144
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
6-41 2.36e-03

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 39.81  E-value: 2.36e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 740851854    6 FDAIIVGAGLAGSVAALVLAREGAQVLVIE-------RGNSAG 41
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEqfdlphsRGSSHG 43
PLN02976 PLN02976
amine oxidase
9-71 2.45e-03

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 40.24  E-value: 2.45e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 740851854    9 IIVGAGLAGSVAALVLAREGAQVLVIErgnsagAKNVTGGRLYAH--SLE-------RIIPGFADQAPIERM 71
Cdd:PLN02976  697 IVVGAGPAGLTAARHLQRQGFSVTVLE------ARSRIGGRVYTDrsSLSvpvdlgaSIITGVEADVATERR 762
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
2-171 2.45e-03

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 39.89  E-value: 2.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854   2 SEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERgnsagaknvtggrlyahsLERIIP-----GFADQApiERM----- 71
Cdd:PRK06183   7 DAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLER------------------WPTLYDlpravGIDDEA--LRVlqaig 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851854  72 ITHEKLAFMTDNGAMTidYCNGEEAAASQVSYSVL-------RSKFDAWLMEQ------AEEAGAQLITGIRVDNVVQRE 138
Cdd:PRK06183  67 LADEVLPHTTPNHGMR--FLDAKGRCLAEIARPSTgefgwprRNAFHQPLLEAvlraglARFPHVRVRFGHEVTALTQDD 144
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 740851854 139 GKV-VGVE-ADGDILE--AKVVILADGVNSLLAEKLG 171
Cdd:PRK06183 145 DGVtVTLTdADGQRETvrARYVVGCDGANSFVRRTLG 181
MnmG COG0445
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal ...
6-34 3.04e-03

tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440214 [Multi-domain]  Cd Length: 626  Bit Score: 39.99  E-value: 3.04e-03
                         10        20
                 ....*....|....*....|....*....
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGAQVLVI 34
Cdd:COG0445    7 YDVIVVGGGHAGCEAALAAARMGAKTLLL 35
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
6-40 5.53e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 38.93  E-value: 5.53e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 740851854   6 FDAIIVGAGLAGSVAALVLAREGaQVLVI-----ERGNSA 40
Cdd:COG0029    5 TDVLVIGSGIAGLSAALKLAERG-RVTLLtkgelGESNTR 43
PRK00711 PRK00711
D-amino acid dehydrogenase;
114-164 5.93e-03

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 38.63  E-value: 5.93e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 740851854 114 LMEQAEEAGAQLITGIRVDNVVQREGKVVGVEADGDILEAKVVILADGVNS 164
Cdd:PRK00711 207 LAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQTGGGVITADAYVVALGSYS 257
TrmFO COG1206
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and ...
9-35 6.44e-03

Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Folate-dependent tRNA-U54 methylase TrmFO/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440819  Cd Length: 436  Bit Score: 38.50  E-value: 6.44e-03
                         10        20
                 ....*....|....*....|....*..
gi 740851854   9 IIVGAGLAGSVAALVLAREGAQVLVIE 35
Cdd:COG1206    5 TVIGGGLAGSEAAWQLAERGVPVRLYE 31
PTZ00306 PTZ00306
NADH-dependent fumarate reductase; Provisional
9-42 9.38e-03

NADH-dependent fumarate reductase; Provisional


Pssm-ID: 140327 [Multi-domain]  Cd Length: 1167  Bit Score: 38.61  E-value: 9.38e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 740851854    9 IIVGAGLAGSVAALVLAREGAQVLVIER-----GNSAGA 42
Cdd:PTZ00306  413 IVVGGGLAGCSAAIEAASCGAQVILLEKeaklgGNSAKA 451
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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