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Conserved domains on  [gi|740851780|ref|WP_038637033|]
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MULTISPECIES: protein CreA [Citrobacter]

Protein Classification

protein CreA( domain architecture ID 10013636)

protein CreA (catabolite regulation protein A) is encoded as part of the creABCD gene cluster but is not essential for the activation of cre regulon gene expression

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10756 PRK10756
protein CreA;
1-157 6.08e-116

protein CreA;


:

Pssm-ID: 236752  Cd Length: 157  Bit Score: 324.38  E-value: 6.08e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   1 MKYKSLAISSILLMLAQVAHAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDAAI 80
Cdd:PRK10756   1 MKYKHLILSLSLLLLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAI 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740851780  81 SCQQVGPVELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPWRQ 157
Cdd:PRK10756  81 SCQQVGPIELSDKIKNGKAQGEVVFKKRTSLVFKKLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPVMPWRQ 157
 
Name Accession Description Interval E-value
PRK10756 PRK10756
protein CreA;
1-157 6.08e-116

protein CreA;


Pssm-ID: 236752  Cd Length: 157  Bit Score: 324.38  E-value: 6.08e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   1 MKYKSLAISSILLMLAQVAHAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDAAI 80
Cdd:PRK10756   1 MKYKHLILSLSLLLLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAI 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740851780  81 SCQQVGPVELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPWRQ 157
Cdd:PRK10756  81 SCQQVGPIELSDKIKNGKAQGEVVFKKRTSLVFKKLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPVMPWRQ 157
CreA COG3045
Periplasmic catabolite regulation protein CreA (function unknown) [Signal transduction ...
1-156 1.34e-96

Periplasmic catabolite regulation protein CreA (function unknown) [Signal transduction mechanisms];


Pssm-ID: 442279  Cd Length: 155  Bit Score: 275.16  E-value: 1.34e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   1 MKYK--SLAISSILLMLAQVAHAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDA 78
Cdd:COG3045    1 MKRLllLALAAALALLAAAAAAAEEIGEVSTVFKLLGPNDKIVVEAFDDPKVPGVTCHVSRAKTGGIKGLLGLAEDPSDA 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740851780  79 AISCQQVGPVELSDRIKngkaQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPWR 156
Cdd:COG3045   81 SIACRQTGPITFGDKLK----QGEEVFSERRSLLFKSLQVVRIYDAKRNTLVYLVYSDKLIEGSPKNSISTVPIMPWG 154
CreA pfam05981
CreA protein; This family consists of several bacterial CreA proteins, the function of which ...
34-155 2.38e-75

CreA protein; This family consists of several bacterial CreA proteins, the function of which is unknown.


Pssm-ID: 428704  Cd Length: 118  Bit Score: 220.11  E-value: 2.38e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   34 FGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPVELSDRIKngkaQGEVVFKKRTSLVF 113
Cdd:pfam05981   1 LGPNDKIVVEAFDDPKVPGVTCHISRAKTGGIKGALGLAEDPSDASIACRQTGPITFPGKID----QGEEVFSESTSLLF 76
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 740851780  114 KSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPW 155
Cdd:pfam05981  77 KSLQVVRIYDAKRNTLVYLVYSDKLIEGSPKNSISTVPLMPW 118
 
Name Accession Description Interval E-value
PRK10756 PRK10756
protein CreA;
1-157 6.08e-116

protein CreA;


Pssm-ID: 236752  Cd Length: 157  Bit Score: 324.38  E-value: 6.08e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   1 MKYKSLAISSILLMLAQVAHAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDAAI 80
Cdd:PRK10756   1 MKYKHLILSLSLLLLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAI 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 740851780  81 SCQQVGPVELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPWRQ 157
Cdd:PRK10756  81 SCQQVGPIELSDKIKNGKAQGEVVFKKRTSLVFKKLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPVMPWRQ 157
CreA COG3045
Periplasmic catabolite regulation protein CreA (function unknown) [Signal transduction ...
1-156 1.34e-96

Periplasmic catabolite regulation protein CreA (function unknown) [Signal transduction mechanisms];


Pssm-ID: 442279  Cd Length: 155  Bit Score: 275.16  E-value: 1.34e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   1 MKYK--SLAISSILLMLAQVAHAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDA 78
Cdd:COG3045    1 MKRLllLALAAALALLAAAAAAAEEIGEVSTVFKLLGPNDKIVVEAFDDPKVPGVTCHVSRAKTGGIKGLLGLAEDPSDA 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 740851780  79 AISCQQVGPVELSDRIKngkaQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPWR 156
Cdd:COG3045   81 SIACRQTGPITFGDKLK----QGEEVFSERRSLLFKSLQVVRIYDAKRNTLVYLVYSDKLIEGSPKNSISTVPIMPWG 154
CreA pfam05981
CreA protein; This family consists of several bacterial CreA proteins, the function of which ...
34-155 2.38e-75

CreA protein; This family consists of several bacterial CreA proteins, the function of which is unknown.


Pssm-ID: 428704  Cd Length: 118  Bit Score: 220.11  E-value: 2.38e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740851780   34 FGPDHKIVVEAFDDPDVTNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPVELSDRIKngkaQGEVVFKKRTSLVF 113
Cdd:pfam05981   1 LGPNDKIVVEAFDDPKVPGVTCHISRAKTGGIKGALGLAEDPSDASIACRQTGPITFPGKID----QGEEVFSESTSLLF 76
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 740851780  114 KSLQVVRFYDAKRNALAYLAYSDKVVDGSPKNAISAVPIMPW 155
Cdd:pfam05981  77 KSLQVVRIYDAKRNTLVYLVYSDKLIEGSPKNSISTVPLMPW 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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