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Conserved domains on  [gi|739686920|ref|WP_037541514|]
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MULTISPECIES: peptidase [Staphylococcus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5584 super family cl44263
Uncharacterized conserved protein YtzB [Function unknown];
27-104 5.38e-19

Uncharacterized conserved protein YtzB [Function unknown];


The actual alignment was detected with superfamily member COG5584:

Pssm-ID: 444323  Cd Length: 103  Bit Score: 74.92  E-value: 5.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739686920  27 YLAKHKFYNAERLLEEVKTYFRE---VKGSYIVHQPIVLDNVNQNQPIYQGGITAYKHGELVEYEFYADALSGQVLDIIE 103
Cdd:COG5584   23 YVKKKKKISAEKVLEKVKEAFKKegpIEGSWIYMKPEPFNKFGLTTKVYRGGISRLEDGELVQYEFIADAYTGTILDLYR 102


                 .
gi 739686920 104 L 104
Cdd:COG5584  103 V 103
 
Name Accession Description Interval E-value
COG5584 COG5584
Uncharacterized conserved protein YtzB [Function unknown];
27-104 5.38e-19

Uncharacterized conserved protein YtzB [Function unknown];


Pssm-ID: 444323  Cd Length: 103  Bit Score: 74.92  E-value: 5.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739686920  27 YLAKHKFYNAERLLEEVKTYFRE---VKGSYIVHQPIVLDNVNQNQPIYQGGITAYKHGELVEYEFYADALSGQVLDIIE 103
Cdd:COG5584   23 YVKKKKKISAEKVLEKVKEAFKKegpIEGSWIYMKPEPFNKFGLTTKVYRGGISRLEDGELVQYEFIADAYTGTILDLYR 102


                 .
gi 739686920 104 L 104
Cdd:COG5584  103 V 103
 
Name Accession Description Interval E-value
COG5584 COG5584
Uncharacterized conserved protein YtzB [Function unknown];
27-104 5.38e-19

Uncharacterized conserved protein YtzB [Function unknown];


Pssm-ID: 444323  Cd Length: 103  Bit Score: 74.92  E-value: 5.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739686920  27 YLAKHKFYNAERLLEEVKTYFRE---VKGSYIVHQPIVLDNVNQNQPIYQGGITAYKHGELVEYEFYADALSGQVLDIIE 103
Cdd:COG5584   23 YVKKKKKISAEKVLEKVKEAFKKegpIEGSWIYMKPEPFNKFGLTTKVYRGGISRLEDGELVQYEFIADAYTGTILDLYR 102


                 .
gi 739686920 104 L 104
Cdd:COG5584  103 V 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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