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Conserved domains on  [gi|739575808|ref|WP_037433807|]
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fimbrial protein [Serratia plymuthica]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
4-187 1.39e-40

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 135.17  E-value: 1.39e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   4 NKIMLAAVLALGATSMMAQADIknqgrGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGK-STPKNFQIKLEN 82
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAAD-----GTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGStSGPKPFSIKLTN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  83 CDlnpgsgtpvAGKNNAVSITFSGAASSFDPNLLGIT--GVAKGASIAITDGSGEVIKLGQATKAQTLQ-NGNNTLSFAA 159
Cdd:COG3539   77 CD---------AGTSNSVKVTFTGTADSANPGLLANTgsGGASGVGIQLLDSDGTPIPLGTPSSAVTLTsNGSATLPFYA 147

                        170       180
                 ....*....|....*....|....*...
gi 739575808 160 YLQgskASSAAVIPGEFQSVADFTLAYQ 187
Cdd:COG3539  148 RYV---ATGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
4-187 1.39e-40

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 135.17  E-value: 1.39e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   4 NKIMLAAVLALGATSMMAQADIknqgrGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGK-STPKNFQIKLEN 82
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAAD-----GTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGStSGPKPFSIKLTN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  83 CDlnpgsgtpvAGKNNAVSITFSGAASSFDPNLLGIT--GVAKGASIAITDGSGEVIKLGQATKAQTLQ-NGNNTLSFAA 159
Cdd:COG3539   77 CD---------AGTSNSVKVTFTGTADSANPGLLANTgsGGASGVGIQLLDSDGTPIPLGTPSSAVTLTsNGSATLPFYA 147

                        170       180
                 ....*....|....*....|....*...
gi 739575808 160 YLQgskASSAAVIPGEFQSVADFTLAYQ 187
Cdd:COG3539  148 RYV---ATGATVTAGSFNATATFTIDYQ 172
PRK09733 PRK09733
fimbrial-like protein;
10-187 1.14e-24

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 94.63  E-value: 1.14e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  10 AVLALGATSMMAQADIKNQGRGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTPKNFQIKLENCDLNPGS 89
Cdd:PRK09733   5 SLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  90 GTpvagkNNAVSITFSGAAS-SFDPNLL-----GITGVAKGASIAITD-GSGEVIKLGQATKAQTLQNGNNTLSFAAYLQ 162
Cdd:PRK09733  85 TT-----YSKAKVTFTTANTmTGQSDLLkntkeTEIGGATGVGVRILDsQSGEVTLGTPVVITFNNTNSYQELNFKARME 159

                        170       180
                 ....*....|....*....|....*
gi 739575808 163 gskASSAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK09733 160 ---SPSKDATPGNVYAQADYKIAYE 181
Fimbrial pfam00419
Fimbrial protein;
33-187 4.68e-07

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 47.43  E-value: 4.68e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   33 VTFKGAI--IDAPCSITPETVDqTVNLGQVSNVALKDGGK-STPKNFQIKLeNCDLNPGSgtpvagknNAVSITFSGAAS 109
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEgSRQKPFSITL-ECSSGSSA--------VKVTVGLFGTAD 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  110 SFDPNLLGITGVAKGAS---IAITDGSGEVIKLGQATKAQTL---QNGNNTLSFAAYLQgsKASSAAVIPGEFQSVADFT 183
Cdd:pfam00419  71 ASSPNLLLTGNGAGAATgvgIRLYDANGGALPPNNGTSSIPVsatAAVATGITFTASLV--ATTGGTPTAGDFNATATIV 148


                  ....
gi 739575808  184 LAYQ 187
Cdd:pfam00419 149 VDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
4-187 1.39e-40

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 135.17  E-value: 1.39e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   4 NKIMLAAVLALGATSMMAQADIknqgrGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGK-STPKNFQIKLEN 82
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAAD-----GTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGStSGPKPFSIKLTN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  83 CDlnpgsgtpvAGKNNAVSITFSGAASSFDPNLLGIT--GVAKGASIAITDGSGEVIKLGQATKAQTLQ-NGNNTLSFAA 159
Cdd:COG3539   77 CD---------AGTSNSVKVTFTGTADSANPGLLANTgsGGASGVGIQLLDSDGTPIPLGTPSSAVTLTsNGSATLPFYA 147

                        170       180
                 ....*....|....*....|....*...
gi 739575808 160 YLQgskASSAAVIPGEFQSVADFTLAYQ 187
Cdd:COG3539  148 RYV---ATGATVTAGSFNATATFTIDYQ 172
PRK09733 PRK09733
fimbrial-like protein;
10-187 1.14e-24

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 94.63  E-value: 1.14e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  10 AVLALGATSMMAQADIKNQGRGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTPKNFQIKLENCDLNPGS 89
Cdd:PRK09733   5 SLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  90 GTpvagkNNAVSITFSGAAS-SFDPNLL-----GITGVAKGASIAITD-GSGEVIKLGQATKAQTLQNGNNTLSFAAYLQ 162
Cdd:PRK09733  85 TT-----YSKAKVTFTTANTmTGQSDLLkntkeTEIGGATGVGVRILDsQSGEVTLGTPVVITFNNTNSYQELNFKARME 159

                        170       180
                 ....*....|....*....|....*
gi 739575808 163 gskASSAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK09733 160 ---SPSKDATPGNVYAQADYKIAYE 181
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 3-187 2.75e-22

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 88.49  E-value: 2.75e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   3 LNKIMLA-AVLALGATSMMAqadiKNQGRGTVTFKGAIIDAPCSITPETVDQTVNLGQVS-NVALKDGGKSTPKNFQIKL 80
Cdd:PRK15209   1 MKKVVFAlSALALTSTSVFA----AESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKkSVFKAIGDKSSAKPFQIKL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  81 ENCDLNpgsgtpvagKNNAVSITFSGAASSFDPNLLGIT---GVAKGASIAITDGSGEVIKLGQATKAQTLQNGNNTLSF 157
Cdd:PRK15209  77 EDCDIT---------TNKKVNVSFNGVGDADDSTLVSVSteaGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYF 147

                        170       180       190
                 ....*....|....*....|....*....|
gi 739575808 158 AAYLQGSKassAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK15209 148 TANYVSTK---DTVTTGYGNAEVDFNLSYE 174
PRK15210 PRK15210
fimbrial protein;
4-186 7.51e-18

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 77.05  E-value: 7.51e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   4 NKImlaaVLALGATSMMAQADIKNQ---------GRGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKST-P 73
Cdd:PRK15210   3 NKI----ILAMAAAGMMYGASVFAAdttptagpfGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTeS 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  74 KNFQIKLENCDLNPGSGTPV--AGKNNAVSITFSGAASSFDPNLLGiTGVAKGASIAITDGSGEVIKLGQAT----KAQT 147
Cdd:PRK15210  79 KPFTIHLQNCAFDPNIPDTAgsAGKMSKVTVSFSGTANTSKKAYTT-SGSAQHVGVQLLKSDNTSIIEPNTPmpdgDAQQ 157

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 739575808 148 LQNGNNTLSFAAYLqgsKASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK15210 158 LQAGNNELNFFARL---IALDNGVTPGDFNASVTYTLKY 193
PRK15283 PRK15283
fimbrial major subunit StfA;
5-186 4.52e-17

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 74.81  E-value: 4.52e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   5 KIMLAAVLALGATSMmaqADIKNQGRGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTPKNFQIKLENCD 84
Cdd:PRK15283   6 KAAVAAALVMGVSSF---ANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGLENCA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  85 LNpgsgtpvAGKNNAVSITFSGAASSFDPNLLGIT----GVAKGASIAITDGSGEVIKLGQATKAQTLQNGN-----NTL 155
Cdd:PRK15283  83 FT-------TEKEASTVFSAIGNESSANPGSVALMriggGEMAGSSIVIGNHLGSAIKLGDAYSENLTMNGSvaaakQTL 155

                        170       180       190
                 ....*....|....*....|....*....|.
gi 739575808 156 SFAAYLQGSkASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK15283 156 NFKAWVKGD-SAASTIDTGEFSSTVNFTISY 185
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
31-187 8.00e-17

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 74.22  E-value: 8.00e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  31 GTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTPK-NFQIKLENCDlnpgsgtPVAGKNNAVSitFSGAAS 109
Cdd:PRK15194  33 GTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALiPFTIQLNDCD-------PVVAATAAVA--FSGQAD 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808 110 SFDPNLLGITG-----VAKGASIAITDGSGEVIKLGQAT--KAQTLQNGNNTLSFAAYLqgsKASSAAVIPGEFQSVADF 182
Cdd:PRK15194 104 ATNDNLLAVASstnttTATGVGIEILDNTSSILKPDGATfsANQNLIEGTNTLHFSARY---KATGTSASAGQANADATF 180


                 ....*
gi 739575808 183 TLAYQ 187
Cdd:PRK15194 181 IMKYE 185
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 5-186 5.50e-16

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 72.12  E-value: 5.50e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   5 KIMLAAVLALGATSMmAQADIKNQGRgtVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTPKN---FQIKLE 81
Cdd:PRK15261   8 KLAVTASLVMGIVSG-AQAAGSNTAK--VTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNartFHIDLE 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  82 NCDLNPGSGTPVAGKNNAVSITFSGAASSFDPNLLGITGVAKGASIAITDGSGEVIKLGQA-TKA------QTLQNGNNT 154
Cdd:PRK15261  85 GCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTyTQAiadldgDTILDEKQS 164

                        170       180       190
                 ....*....|....*....|....*....|..
gi 739575808 155 LSFAAYLQGskASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK15261 165 LNFTAWLVG--AATGTVGTGEFSSAANVTISY 194
lpfA PRK15289
fimbrial protein; Provisional
 1-187 2.33e-13

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 64.98  E-value: 2.33e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   1 MKLNkiMLAAVLALGATSMMAQADIKNqgrGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKD-GGKSTPKNFQIK 79
Cdd:PRK15289   1 MKRN--IIGGAFTLASLMLAGHALAED---GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGvGSLASPQKFSIK 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  80 LENCDLNPGS------GTPVAGKNNAVSI-TFSGAASSFDPNLLGITGVAKGASIAITDGSGEV-IKLGQATKAQTLQ-N 150
Cdd:PRK15289  76 LENCPATYTQaavrfdGTEAPGGDGDLKVgTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSqVKLYNDSAYTAIDaE 155

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 739575808 151 GNNTLSFAA-YLqgskASSAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK15289 156 GKAEMKFIArYV----ATNATVTAGTANADSQFTVEYK 189
PRK09934 PRK09934
fimbriae assembly protein;
3-186 4.58e-13

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 64.14  E-value: 4.58e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   3 LNKIMLAAVLALGATSMMAQADikNQGRGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKST-PKNFQIKLE 81
Cdd:PRK09934   1 MRRVFFACFCGLLWSPLSWAAD--PLGEINIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTqPVPFSLKLE 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  82 NCDlnPGSgtpvagknnaVSITFSGAASSfDPNLLGI--TGVAKGASIAITDGSGEVIKLGQATKAQTL-QNGNNTLSFA 158
Cdd:PRK09934  79 GCP--PGS----------ASITFTGTPAS-DTNLLALddPAMAQTVAIEIRDSDRSRLALGQASPTVEVdANGNATLNFY 145

                        170       180
                 ....*....|....*....|....*...
gi 739575808 159 AylqGSKASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK09934 146 A---NYIALADGVQPGVAKADATFMINY 170
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 7-186 2.86e-12

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 62.14  E-value: 2.86e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   7 MLAAVLALGATSMMAQADIKNQGRGTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGG--KSTPKNFQIKLENCD 84
Cdd:PRK15187   8 LMVSAIAFGGMLSTAQADTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGmvANQKEDFTIKLEDCD 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  85 LNpgsgtpvagKNNAVSITFSGAASSFDPNLLGIT---GVAKGASIAITDGSGEVIKLGQATKAQTLQNGNNTLSFAAYL 161
Cdd:PRK15187  88 TQ---------TSQNAAVIFNGQQDANQPGSLANTagaGSATNVALQLYGPDGQALNIGESSSTVTLNDGENVIPLSVDY 158

                        170       180
                 ....*....|....*....|....*
gi 739575808 162 QGSKASSAavipGEFQSVADFTLAY 186
Cdd:PRK15187 159 IATGTATA----GNVTATATFSMVY 179
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 31-187 6.43e-10

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 55.49  E-value: 6.43e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  31 GTVTFKGAIIDAPCSITPETVDQTVNLGQVSNVAL-KDGGKSTPKNFQIKLENCdlnpgsGTPVAGknnaVSITFSGAAS 109
Cdd:PRK15191  23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFyRAGDGSAWQPFAIDLQNC------GSTASG----VTVSFSGAAD 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808 110 SFDPNLLGITGV---AKGASIAITDGSGEVIKLGQATKAQTLQNGNNTLSFAAYLQgSKASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK15191  93 SRNTDLLALTAGesdASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYAR-YLADGGAVTPGDANASATFILAY 171


                 .
gi 739575808 187 Q 187
Cdd:PRK15191 172 E 172
PRK15296 PRK15296
fimbrial protein SthA;
6-187 4.00e-09

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 53.56  E-value: 4.00e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   6 IMLAAVLALGATSMMAQadiknqgrGTVTFKGAIIDAPCSITPE-TVDQTVNLGQVSNVALKDGGKST-PKNFQIKLENC 83
Cdd:PRK15296   7 IILAMLTAVASTPVFAQ--------NTITFNGKIYDQACTVQVNgSTDTTIDLGNYSKERIAEKGATTdYVPFTVSLVSC 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  84 dlnPGSGTPVAGKNNavsITFSGAASSFDPNLL-----GITGVAKGASIAITDGSGEVIKLGQATKAQTLQNGNNTLSFA 158
Cdd:PRK15296  79 ---PEAGTGVPTQAM---FRFHGATDDSNPTYFknadeGSETGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFT 152

                        170       180
                 ....*....|....*....|....*....
gi 739575808 159 AYLQGSKASSAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK15296 153 YYAAMANDGSATVTGGDVSTQVTYTVSYQ 181
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 3-187 8.35e-08

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 49.69  E-value: 8.35e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   3 LNKIMLAAVLALGATSMMAQADIKNQGRGTVTFKGAIIDAPCSITPET-VDQTVNLGQVSNVALKDGGKSTPKNFQIKLE 81
Cdd:PRK15260   1 MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNdTMATVDFHTIGSDNFDASGQTTPVPFTLSLQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  82 NCDlnpgsgTPVAgknNAVSITFSGAASSFDPNLLGI--TGVAKGASIAITDGSGE--VIKLGQATkAQTLQNGNNTLSF 157
Cdd:PRK15260  81 DCK------TALA---NGVLVTFQGVEDSTLPGLLALepSSEASGFAIGVETAAQQpvSINATVGT-AFVLKEGITTINL 150

                        170       180       190
                 ....*....|....*....|....*....|
gi 739575808 158 AAYLQgsKASSAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK15260 151 QARLQ--KYAGEEVMPGEFSGSATVSFEYQ 178
Fimbrial pfam00419
Fimbrial protein;
33-187 4.68e-07

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 47.43  E-value: 4.68e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   33 VTFKGAI--IDAPCSITPETVDqTVNLGQVSNVALKDGGK-STPKNFQIKLeNCDLNPGSgtpvagknNAVSITFSGAAS 109
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEgSRQKPFSITL-ECSSGSSA--------VKVTVGLFGTAD 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  110 SFDPNLLGITGVAKGAS---IAITDGSGEVIKLGQATKAQTL---QNGNNTLSFAAYLQgsKASSAAVIPGEFQSVADFT 183
Cdd:pfam00419  71 ASSPNLLLTGNGAGAATgvgIRLYDANGGALPPNNGTSSIPVsatAAVATGITFTASLV--ATTGGTPTAGDFNATATIV 148


                  ....
gi 739575808  184 LAYQ 187
Cdd:pfam00419 149 VDYQ 152
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 35-187 2.36e-05

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 42.76  E-value: 2.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  35 FKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTP-KNFQIKLENCDLNpgsgtpVAGknnaVSITFSGAASSFDP 113
Cdd:PRK15190  32 FTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKfKPFNINLKNCSRG------IAG----AKIWFTGEPDPDNP 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808 114 NLLGITGVAKGASIAITDGSG-EVIKLGQATKA--------QTLQNGNNTLSFaaYLQgSKASSAAVIPGEFQSVADFTL 184
Cdd:PRK15190 102 ALLAITDTGMGSGNMLASGVGvEILNDDQDTISinnadsvvYPLKAGRNTLSF--YIR-YKSTRPTVTSGNATAVMYFDM 178


                 ...
gi 739575808 185 AYQ 187
Cdd:PRK15190 179 QYE 181
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 35-186 2.38e-05

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 42.71  E-value: 2.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  35 FKGAIIDAPCSITPETVD-QTVNLGQVSNVALKDGGKSTPKNFQIKLENCDlnpgsgtpvAGKNNAVSITFSGAASSFDP 113
Cdd:PRK15288  31 FSGSLVASPCTLTMQGTGiAEVDFSSLDSSDFTPDGQSARKPLVFELTDCD---------SALSNGVQVTFTGTEATGMR 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 739575808 114 NLLGITGV--AKGASIAITDGSGEVIKLGQATKAQ-TLQNGNNTLSFAAYLQgsKASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK15288 102 GILAIDSYsgASGIGIGIETLSGVPVGMNDEEGAIfTLVTGKNTLSLNAWVQ--RLPGEDLIPGRFSASALATFEY 175
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-187 3.58e-05

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 42.72  E-value: 3.58e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   1 MKLNKIMLAAvlALGATSMMAQADIKNQGRGTVTFKGAIIDAPCSITPET--------VDQTVNLGQVSNVALKDGGKST 72
Cdd:PRK15307   1 MFLKKYGLAA--AVAMTLSASSAMAADPDTGTITFHGLVTNNTCNISLDNkidqdgndFDITLPTVFVKDFATALGVNST 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  73 --PKNFQIKLENCDlnpgsGTPVagKNNAVSITFSGAASSFDPNLL----GITGVAKGASIAI-TDGSGE--VIKLGQ-- 141
Cdd:PRK15307  79 lgEKQFTLNLSECD-----NATL--KDASAQFNSWGGSSATSGGLLvppaNLQGSATNVNLVLaNNGNTAtdLIKIDQpn 151

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 739575808 142 -ATKAQTLQNGNNTLSF-AAYLQGSK--ASSAAVIPGEFQSVADFTLAYQ 187
Cdd:PRK15307 152 nTQKATISTDGTGDLFYrVAYTQGQKwnADTSPVTSGTVQAQVAFTMIYN 201
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
9-186 7.45e-05

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 41.38  E-value: 7.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   9 AAVLALGATSMMAQADIKNQGRgtVTFKGAIIDAPCSITPETVDQTVNLGQVSNVALKDGGKSTPKN--FQIKLENCDln 86
Cdd:PRK15200   7 ALVGLVLMSPVIAQPVMVESGR--VHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSvpFSLRLISCS-- 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808  87 pgsgtpvAGKNNAVSITFSGAASSFDPNLLGITG---VAKGASIAITDGSG-EVIKLGQATKAQTLQNGNNTLSFAAYLq 162
Cdd:PRK15200  83 -------AEVWRHVGIAFAGVTPAEDPHVFLASGegiGNAGIGLALFDDQQrQIIPNTLPLHYAPILTSEMTLHFTARY- 154

                        170       180
                 ....*....|....*....|....
gi 739575808 163 gsKASSAAVIPGEFQSVADFTLAY 186
Cdd:PRK15200 155 --RAISENMTPGRIHSEVWFTLVY 176
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 6-135 2.71e-04

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 39.83  E-value: 2.71e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   6 IMLAAVLALGATSMMAQADIKNqgRGTVTFKGAIIDAPCSITPETVDqtVNLGQVS-NVALKDGGKSTPKNFQIKLENCD 84
Cdd:PRK15205   7 LLPLALLLLTASGMAAPTDLGP--AGDIHFTITIKAKACELEKDSLE--VDMGTMVlQKPVKVGTELNQKNFSIGLKDCD 82

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 739575808  85 lnpgsgtpvaGKNNAvSITFSGAASSFDPNLLGI-TGVAKGASIAITDGSGE 135
Cdd:PRK15205  83 ----------GISKA-SVTMDGSPDPDDPSLFALdAGGATGVALKIKTSKGT 123
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 1-131 9.34e-04

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 38.15  E-value: 9.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739575808   1 MKLNKIMLAAVLALGATSMMAQADIKNQGrgTVTFKGAIIDAPCSITPETVDQTVNlGQVSNVALKDGGKSTPKNFQIKL 80
Cdd:PRK15300   1 MKLSLKTLTVALAAITLSPAALADTAKDG--TVHITGLIKQNACTVKTDSVEVTLQ-EEFASLFTAAGQTAGDTDFTIEL 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 739575808  81 ENCDLNPGSgtpvagknnAVSITFSGAASSFDPNLLGITGVAKGASIAITD 131
Cdd:PRK15300  78 ENCDANVYS---------SVQARFEGTLDGTDATILKNEDDAENIGVQILD 119
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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