MULTISPECIES: MarR family transcription factor RrpB [Helicobacter]
winged helix-turn-helix transcriptional regulator( domain architecture ID 10004391)
winged helix-turn-helix (HTH) transcriptional regulator containing a HxlR family HTH domain; similar to HTH-type transcriptional regulator HxlR, a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon
List of domain hits
Name | Accession | Description | Interval | E-value | |||
HxlR | COG1733 | DNA-binding transcriptional regulator, HxlR family [Transcription]; |
6-109 | 9.40e-47 | |||
DNA-binding transcriptional regulator, HxlR family [Transcription]; : Pssm-ID: 441339 Cd Length: 108 Bit Score: 145.40 E-value: 9.40e-47
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Name | Accession | Description | Interval | E-value | |||
HxlR | COG1733 | DNA-binding transcriptional regulator, HxlR family [Transcription]; |
6-109 | 9.40e-47 | |||
DNA-binding transcriptional regulator, HxlR family [Transcription]; Pssm-ID: 441339 Cd Length: 108 Bit Score: 145.40 E-value: 9.40e-47
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HxlR | pfam01638 | HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts ... |
16-110 | 2.74e-33 | |||
HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis. Pssm-ID: 460276 [Multi-domain] Cd Length: 91 Bit Score: 110.85 E-value: 2.74e-33
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HTH_ARSR | cd00090 | Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric ... |
14-87 | 3.62e-04 | |||
Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions. Pssm-ID: 238042 [Multi-domain] Cd Length: 78 Bit Score: 36.12 E-value: 3.62e-04
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HTH_ARSR | smart00418 | helix_turn_helix, Arsenical Resistance Operon Repressor; |
25-87 | 9.78e-03 | |||
helix_turn_helix, Arsenical Resistance Operon Repressor; Pssm-ID: 197713 [Multi-domain] Cd Length: 66 Bit Score: 32.18 E-value: 9.78e-03
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Name | Accession | Description | Interval | E-value | |||
HxlR | COG1733 | DNA-binding transcriptional regulator, HxlR family [Transcription]; |
6-109 | 9.40e-47 | |||
DNA-binding transcriptional regulator, HxlR family [Transcription]; Pssm-ID: 441339 Cd Length: 108 Bit Score: 145.40 E-value: 9.40e-47
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HxlR | pfam01638 | HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts ... |
16-110 | 2.74e-33 | |||
HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis. Pssm-ID: 460276 [Multi-domain] Cd Length: 91 Bit Score: 110.85 E-value: 2.74e-33
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HTH_ARSR | cd00090 | Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric ... |
14-87 | 3.62e-04 | |||
Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions. Pssm-ID: 238042 [Multi-domain] Cd Length: 78 Bit Score: 36.12 E-value: 3.62e-04
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COG4742 | COG4742 | Predicted transcriptional regulator, contains HTH domain [Transcription]; |
25-101 | 3.70e-04 | |||
Predicted transcriptional regulator, contains HTH domain [Transcription]; Pssm-ID: 443776 [Multi-domain] Cd Length: 267 Bit Score: 37.95 E-value: 3.70e-04
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HTH_ARSR | smart00418 | helix_turn_helix, Arsenical Resistance Operon Repressor; |
25-87 | 9.78e-03 | |||
helix_turn_helix, Arsenical Resistance Operon Repressor; Pssm-ID: 197713 [Multi-domain] Cd Length: 66 Bit Score: 32.18 E-value: 9.78e-03
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Blast search parameters | ||||
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