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Concise Results
Standard Results
Full Results
MULTISPECIES: APC family permease [Serratia]
Protein Classification
APC family permease ( domain architecture ID 11425014 )
APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton
List of domain hits
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
3-415
2.65e-51
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 179.32
E-value: 2.65e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 3 ESAPEHTF K GN L SVL D V V MITASGVTP A S s IFV IAP LA IAN AG SG A F L SF LIA ACV A AAI AL C YAEL GA A H P S AGG E Y SI 82
Cdd:COG0531 2 SRGESSEL K RK L GLF D L V ALGVGAIIG A G - IFV LPG LA AGL AG PA A I L AW LIA GLL A LLV AL S YAEL AS A F P R AGG A Y TY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 83 IK R LF G T L C G LQTYLFI L SASLFVP A VL A TGAVP YL NTALGTQFDAST A GM L TV L VGGI c AIFNI K AN A LLTGAFL V VEV 162
Cdd:COG0531 81 AR R AL G P L L G FLAGWAL L LSYVLAV A AV A VAFGG YL SSLFPAGGSVLI A LV L IL L LTLL - NLRGV K ES A KVNNILT V LKL 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 163 A VL A L IAWL G FSHPHQSTEILTA P vmldaqgsl A PVS L PLIV A MVGV A L F SYN G YG A AVYM AE DMREQG R PMAI AI M L T L 242
Cdd:COG0531 160 L VL L L FIVV G LFAFDPANFTPFL P --------- A GGG L SGVL A ALAL A F F AFT G FE A IANL AE EAKNPK R NIPR AI I L S L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 243 A IV VLVELV p FTAL L I G SPSLT E M A KQAD P VGYVVTELG GP TL A RVVSGAIY LS VFN A II A IVAQF SR MMF A SG RDG FWL 322
Cdd:COG0531 231 L IV GVLYIL - VSLA L T G VVPYD E L A ASGA P LADAAEAVF GP WG A ILIALGAL LS LLG A LN A SILGA SR LLY A MA RDG LLP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 323 PA F NR alki I HPRFGTP WI A T LL F GV PSA LL A -- FCSDLES L T S FTVILL LL V Y IIM A V A ALIS RRRR HFHHPYLMPLW P 400
Cdd:COG0531 310 KV F AK ---- V HPRFGTP VN A I LL T GV IAL LL L ll GAASFTA L A S LASVGV LL A Y LLV A L A VIVL RRRR PDLPRPFRVPL P 385
410
....*....|....*
gi 727186703 401 L PVVVAL L C CL YV L W 415
Cdd:COG0531 386 L IPILGI L L CL FL L Y 400
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
3-415
2.65e-51
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 179.32
E-value: 2.65e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 3 ESAPEHTF K GN L SVL D V V MITASGVTP A S s IFV IAP LA IAN AG SG A F L SF LIA ACV A AAI AL C YAEL GA A H P S AGG E Y SI 82
Cdd:COG0531 2 SRGESSEL K RK L GLF D L V ALGVGAIIG A G - IFV LPG LA AGL AG PA A I L AW LIA GLL A LLV AL S YAEL AS A F P R AGG A Y TY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 83 IK R LF G T L C G LQTYLFI L SASLFVP A VL A TGAVP YL NTALGTQFDAST A GM L TV L VGGI c AIFNI K AN A LLTGAFL V VEV 162
Cdd:COG0531 81 AR R AL G P L L G FLAGWAL L LSYVLAV A AV A VAFGG YL SSLFPAGGSVLI A LV L IL L LTLL - NLRGV K ES A KVNNILT V LKL 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 163 A VL A L IAWL G FSHPHQSTEILTA P vmldaqgsl A PVS L PLIV A MVGV A L F SYN G YG A AVYM AE DMREQG R PMAI AI M L T L 242
Cdd:COG0531 160 L VL L L FIVV G LFAFDPANFTPFL P --------- A GGG L SGVL A ALAL A F F AFT G FE A IANL AE EAKNPK R NIPR AI I L S L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 243 A IV VLVELV p FTAL L I G SPSLT E M A KQAD P VGYVVTELG GP TL A RVVSGAIY LS VFN A II A IVAQF SR MMF A SG RDG FWL 322
Cdd:COG0531 231 L IV GVLYIL - VSLA L T G VVPYD E L A ASGA P LADAAEAVF GP WG A ILIALGAL LS LLG A LN A SILGA SR LLY A MA RDG LLP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 323 PA F NR alki I HPRFGTP WI A T LL F GV PSA LL A -- FCSDLES L T S FTVILL LL V Y IIM A V A ALIS RRRR HFHHPYLMPLW P 400
Cdd:COG0531 310 KV F AK ---- V HPRFGTP VN A I LL T GV IAL LL L ll GAASFTA L A S LASVGV LL A Y LLV A L A VIVL RRRR PDLPRPFRVPL P 385
410
....*....|....*
gi 727186703 401 L PVVVAL L C CL YV L W 415
Cdd:COG0531 386 L IPILGI L L CL FL L Y 400
AA_permease_2
pfam13520 Amino acid permease;
14-414
1.45e-18
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 87.37
E-value: 1.45e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 14 L SV L DVVMITASG V T pas SIFVIAPLAI A NA G SGAFLS - FLI A ACVAA A IA L C YAEL GA A H P SA GG E Y SIIKRL FG TLCG 92
Cdd:pfam13520 1 L GL L SAFALVIGS V I --- GSGIFVAPLV A SG G PALIVW g WIA A IIFSL A VG L V YAEL SS A L P RS GG I Y VYLENA FG KFVA 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 93 LQTYLFILS A SLFVP A VL A TG A VP YL NT ALG TQFDAS T -- AGMLTVLVGG I C AI F NI ------- K ANAL L TGAF L VVEVA 163
Cdd:pfam13520 78 FLAGWSNWF A YVLGL A SS A SV A AS YL LS ALG PDLVPT T wl TYGIAIAILI I F AI I NI rgvresa K IQNI L GILK L LLPLI 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 164 VLALIAWLGFSHPHQ steilta PVMLDAQGSLA P VSL P LIV A MVGVA L F S YN G YGA A VYMA E DMREQGR P M AI A I MLTLA 243
Cdd:pfam13520 158 LIIILGLVTADGGGF ------- NLLSGEWHTFF P DGW P GVF A GFLGV L W S FT G FES A ANVS E EVKKRNV P K AI F I GVIIV 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 244 I V VLVELVPFTALLIGSPSLTEMAKQADPVGYVVTEL GG PTL A RV V SGAIY LS VFN A IIAIVAQF SR MMF A SG RDG f W LP 323
Cdd:pfam13520 231 G V LYILVNIAFFGVVPDDEIALSSGLGQVAALLFQAV GG KWG A II V VILLA LS LLG A VNTAIVGA SR LLY A LA RDG - V LP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 324 a F N R ALKIIHP r FG T P WI A TL L FGVP S AL L AF ----- CSDLES L T S FTVILL LL V Y IIMAVAA LI S R RR R hf HHPYLM P L 398
Cdd:pfam13520 310 - F S R FFAKVNK - FG S P IR A II L TAIL S LI L LL lflls PAAYNA L L S LSAYGY LL S Y LLPIIGL LI L R KK R -- PDLGRI P G 385
410
....*....|....*.
gi 727186703 399 WPLPVVVAL L CC L YVL 414
Cdd:pfam13520 386 RWPVAIFGI L FS L FLI 401
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
7-389
8.51e-16
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 79.47
E-value: 8.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 7 E HTF K GN L SVL D VVMI t AS G V T PASS I F V IAPL - A IANA G SGAF LSFLI AACV A AAIAL CYAE L GA AH P S AG GE Y SIIKR 85
Cdd:TIGR00906 23 E SKM K RC L TTW D LMAL - GI G S T IGAG I Y V LTGE v A RNDS G PAIV LSFLI SGLA A VLSGF CYAE F GA RV P K AG SA Y LYSYV 101
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 86 LF G T L cglqt YL FI LSAS L FVPA V LA T G AV P ----- Y LNTA L G --- T QF DASTAGMLT -------- VLVGGICAI ----- 144
Cdd:TIGR00906 102 TV G E L ----- WA FI TGWN L ILEY V IG T A AV A rswsa Y FDEL L N kqi G QF RRTYFKLNY dglaeypd FFAVCLILL lavll 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 145 - F NI K AN A LLTGA F LVVEVA VL ALIAWL GF SHPHQSTEIL T AP vml DAQ G SLA P VSLPLIVAMVGVAL F SYN G YG A AVYM 223
Cdd:TIGR00906 177 s F GV K ES A WVNKI F TAINIL VL LFVIIA GF TKADVANWSI T EE --- KGA G GFM P YGFTGVLSGAATCF F AFI G FD A IATT 253
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 224 A E DMREQG R PMA I A I MLT L AIVVLVELVPFT AL LIGS P SLTEMAKQAD PV GY vvt E LG G PTL A R -- V VS GA IYLSVFNAI 301
Cdd:TIGR00906 254 G E EVKNPQ R AIP I G I VTS L LVCFVAYFLMSA AL TLMM P YYLLDPDAPF PV AF --- E YV G WDP A K yi V AV GA LCGMSTSLL 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 302 IAIVAQ f S R MMF A SG RDG FWLPAFNR alki I HPRFG TP WI AT LLF G VPS AL L AF CS DL ES L TSFTV I LL LL V Y IIM A VAA 381
Cdd:TIGR00906 331 GGMFPL - P R VIY A MA RDG LLFKWLAQ ---- I NSKTK TP IN AT VVS G AIA AL M AF LF DL KA L VDLLS I GT LL A Y SLV A ACV 405
....*...
gi 727186703 382 LI S R RRRH 389
Cdd:TIGR00906 406 LI L R YQPG 413
frlA
PRK11357 amino acid permease;
17-419
7.07e-13
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 70.27
E-value: 7.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 17 LDV V MIT A S G V T PA S S IFV IAPLAIAN AG SGAF -- L S F L I AACVAAAIALC YAEL GA A H P SA G GE Y SII K ---- R LFGT L 90
Cdd:PRK11357 12 FWA V LAI A V G T T VG S G IFV SVGEVAKA AG TPWL tv L A F V I GGLIVIPQMCV YAEL ST A Y P EN G AD Y VYL K nags R PLAF L 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 91 C G LQTYLFILSA SL fvp AVL A TGA V PY L N talgtq F DASTAGM L TVLVGGICA I F ------- NIKAN A LLTGAFLVVEVA 163
Cdd:PRK11357 92 S G WASFWANDAP SL --- SIM A LAI V SN L G ------ F LTPIDPL L GKFIAAGLI I A fmllhlr SVEGG A AFQTLITIAKII 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 164 VLALIAW LG FSHPHQSTEILTAPVMLD A Q GS LAP vslpl IV A MVGVALF SY N G YGAAV YM AEDMREQ G RP M AI A IMLT l A 243
Cdd:PRK11357 163 PFTIVIG LG IFWFKAENFAAPTTTAIG A T GS FMA ----- LL A GISATSW SY T G MASIC YM TGEIKNP G KT M PR A LIGS - C 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 244 IV VLV ELVPFTALLI G SPSLTEM A KQAD P VGYVV T ELG -- G P T LARV V SGAIYLSVFNAIIAI V AQFS R MMF A SGR D GFW 321
Cdd:PRK11357 237 LL VLV LYTLLALVIS G LMPFDKL A NSET P ISDAL T WIP al G S T AGIF V AITAMIVILGSLSSC V MYQP R LEY A MAK D NLF 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 322 LPA F NR alki I HP RFG TP WIATL L F G VPSALLA F C SDL E SL TSFTVILLLLVYIIMAVAALIS R R R RHFHHPYLM P LWP L 401
Cdd:PRK11357 317 FKC F GH ---- V HP KYN TP DVSII L Q G ALGIFFI F V SDL T SL LGYFTLVMCFKNTLTFGSIIWC R K R DDYKPLWRT P AFG L 392
410
....*....|....*...
gi 727186703 402 PVVV A LLCC L YVLWTILI 419
Cdd:PRK11357 393 MTTL A IASS L ILVASTFV 410
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
3-415
2.65e-51
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 179.32
E-value: 2.65e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 3 ESAPEHTF K GN L SVL D V V MITASGVTP A S s IFV IAP LA IAN AG SG A F L SF LIA ACV A AAI AL C YAEL GA A H P S AGG E Y SI 82
Cdd:COG0531 2 SRGESSEL K RK L GLF D L V ALGVGAIIG A G - IFV LPG LA AGL AG PA A I L AW LIA GLL A LLV AL S YAEL AS A F P R AGG A Y TY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 83 IK R LF G T L C G LQTYLFI L SASLFVP A VL A TGAVP YL NTALGTQFDAST A GM L TV L VGGI c AIFNI K AN A LLTGAFL V VEV 162
Cdd:COG0531 81 AR R AL G P L L G FLAGWAL L LSYVLAV A AV A VAFGG YL SSLFPAGGSVLI A LV L IL L LTLL - NLRGV K ES A KVNNILT V LKL 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 163 A VL A L IAWL G FSHPHQSTEILTA P vmldaqgsl A PVS L PLIV A MVGV A L F SYN G YG A AVYM AE DMREQG R PMAI AI M L T L 242
Cdd:COG0531 160 L VL L L FIVV G LFAFDPANFTPFL P --------- A GGG L SGVL A ALAL A F F AFT G FE A IANL AE EAKNPK R NIPR AI I L S L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 243 A IV VLVELV p FTAL L I G SPSLT E M A KQAD P VGYVVTELG GP TL A RVVSGAIY LS VFN A II A IVAQF SR MMF A SG RDG FWL 322
Cdd:COG0531 231 L IV GVLYIL - VSLA L T G VVPYD E L A ASGA P LADAAEAVF GP WG A ILIALGAL LS LLG A LN A SILGA SR LLY A MA RDG LLP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 323 PA F NR alki I HPRFGTP WI A T LL F GV PSA LL A -- FCSDLES L T S FTVILL LL V Y IIM A V A ALIS RRRR HFHHPYLMPLW P 400
Cdd:COG0531 310 KV F AK ---- V HPRFGTP VN A I LL T GV IAL LL L ll GAASFTA L A S LASVGV LL A Y LLV A L A VIVL RRRR PDLPRPFRVPL P 385
410
....*....|....*
gi 727186703 401 L PVVVAL L C CL YV L W 415
Cdd:COG0531 386 L IPILGI L L CL FL L Y 400
AA_permease_2
pfam13520 Amino acid permease;
14-414
1.45e-18
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 87.37
E-value: 1.45e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 14 L SV L DVVMITASG V T pas SIFVIAPLAI A NA G SGAFLS - FLI A ACVAA A IA L C YAEL GA A H P SA GG E Y SIIKRL FG TLCG 92
Cdd:pfam13520 1 L GL L SAFALVIGS V I --- GSGIFVAPLV A SG G PALIVW g WIA A IIFSL A VG L V YAEL SS A L P RS GG I Y VYLENA FG KFVA 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 93 LQTYLFILS A SLFVP A VL A TG A VP YL NT ALG TQFDAS T -- AGMLTVLVGG I C AI F NI ------- K ANAL L TGAF L VVEVA 163
Cdd:pfam13520 78 FLAGWSNWF A YVLGL A SS A SV A AS YL LS ALG PDLVPT T wl TYGIAIAILI I F AI I NI rgvresa K IQNI L GILK L LLPLI 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 164 VLALIAWLGFSHPHQ steilta PVMLDAQGSLA P VSL P LIV A MVGVA L F S YN G YGA A VYMA E DMREQGR P M AI A I MLTLA 243
Cdd:pfam13520 158 LIIILGLVTADGGGF ------- NLLSGEWHTFF P DGW P GVF A GFLGV L W S FT G FES A ANVS E EVKKRNV P K AI F I GVIIV 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 244 I V VLVELVPFTALLIGSPSLTEMAKQADPVGYVVTEL GG PTL A RV V SGAIY LS VFN A IIAIVAQF SR MMF A SG RDG f W LP 323
Cdd:pfam13520 231 G V LYILVNIAFFGVVPDDEIALSSGLGQVAALLFQAV GG KWG A II V VILLA LS LLG A VNTAIVGA SR LLY A LA RDG - V LP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 324 a F N R ALKIIHP r FG T P WI A TL L FGVP S AL L AF ----- CSDLES L T S FTVILL LL V Y IIMAVAA LI S R RR R hf HHPYLM P L 398
Cdd:pfam13520 310 - F S R FFAKVNK - FG S P IR A II L TAIL S LI L LL lflls PAAYNA L L S LSAYGY LL S Y LLPIIGL LI L R KK R -- PDLGRI P G 385
410
....*....|....*.
gi 727186703 399 WPLPVVVAL L CC L YVL 414
Cdd:pfam13520 386 RWPVAIFGI L FS L FLI 401
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
7-389
8.51e-16
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 79.47
E-value: 8.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 7 E HTF K GN L SVL D VVMI t AS G V T PASS I F V IAPL - A IANA G SGAF LSFLI AACV A AAIAL CYAE L GA AH P S AG GE Y SIIKR 85
Cdd:TIGR00906 23 E SKM K RC L TTW D LMAL - GI G S T IGAG I Y V LTGE v A RNDS G PAIV LSFLI SGLA A VLSGF CYAE F GA RV P K AG SA Y LYSYV 101
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 86 LF G T L cglqt YL FI LSAS L FVPA V LA T G AV P ----- Y LNTA L G --- T QF DASTAGMLT -------- VLVGGICAI ----- 144
Cdd:TIGR00906 102 TV G E L ----- WA FI TGWN L ILEY V IG T A AV A rswsa Y FDEL L N kqi G QF RRTYFKLNY dglaeypd FFAVCLILL lavll 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 145 - F NI K AN A LLTGA F LVVEVA VL ALIAWL GF SHPHQSTEIL T AP vml DAQ G SLA P VSLPLIVAMVGVAL F SYN G YG A AVYM 223
Cdd:TIGR00906 177 s F GV K ES A WVNKI F TAINIL VL LFVIIA GF TKADVANWSI T EE --- KGA G GFM P YGFTGVLSGAATCF F AFI G FD A IATT 253
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 224 A E DMREQG R PMA I A I MLT L AIVVLVELVPFT AL LIGS P SLTEMAKQAD PV GY vvt E LG G PTL A R -- V VS GA IYLSVFNAI 301
Cdd:TIGR00906 254 G E EVKNPQ R AIP I G I VTS L LVCFVAYFLMSA AL TLMM P YYLLDPDAPF PV AF --- E YV G WDP A K yi V AV GA LCGMSTSLL 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 302 IAIVAQ f S R MMF A SG RDG FWLPAFNR alki I HPRFG TP WI AT LLF G VPS AL L AF CS DL ES L TSFTV I LL LL V Y IIM A VAA 381
Cdd:TIGR00906 331 GGMFPL - P R VIY A MA RDG LLFKWLAQ ---- I NSKTK TP IN AT VVS G AIA AL M AF LF DL KA L VDLLS I GT LL A Y SLV A ACV 405
....*...
gi 727186703 382 LI S R RRRH 389
Cdd:TIGR00906 406 LI L R YQPG 413
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
9-414
9.90e-15
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 76.32
E-value: 9.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 9 TF K GNLSV L DV V M I TA s G VTPA S S IFV IAPLAIA NAGS G -- A FLSFLIAACVAAAI AL C YAELG AAH P SA GGEY SI I KRL 86
Cdd:TIGR00911 39 AL K KEITL L SG V G I IV - G TIIG S G IFV SPKGVLK NAGS V gl A LIMWAVCGIFSIVG AL V YAELG TTI P KS GGEY NY I LEV 117
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 87 FG T L ----- CGLQTYLFILSASLFVPAVL A TGAV - P YLNTALGTQFDASTAGM L T VL VGGICAIFNI K ANALLTGA F LVV 160
Cdd:TIGR00911 118 FG P L laflr LWIELLVIRPGSQAVNALNF A IYIL t P VFPDCEVPEWAIRLVAV L C VL LLTLVNCLSV K WATRVQDI F TAC 197
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 161 EVAV L A LI AWL G FSH ---- PHQ S TEILT A pv MLDAQG S LAPVS L PLIVAM vgval FS Y N G YGAAVYMA E DMREQG R PMA I 236
Cdd:TIGR00911 198 KLLA L L LI IIT G WVQ lgkg GVE S LNPKN A -- FEGTET S AGGIV L AFYSGI ----- WA Y G G WNYLNFVT E EVKNPY R TLP I 270
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 237 AI MLTLA IV VLVELVPFT A LLIGSPSLTEM A KQ A DP V GYVVTE LG gp TLARVVSGAIY LS V F NAIIAIVAQF SR MM F AS G 316
Cdd:TIGR00911 271 AI IISMP IV TFIYVLTNI A YFTVLSPEELL A SL A VA V DFGERL LG -- VMSWAMPALVG LS C F GSVNGSLFSS SR LF F VG G 348
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 317 R D G F w LP A fnr A L KI IH PRFG TP w IAT LL FGVPSA LL - A F CS D LE SL TSFTVILLL L VY i IM AVA A L -- ISRR R RHFHH P 393
Cdd:TIGR00911 349 R E G H - LP S --- L L SM IH VKRL TP - LPS LL IVCTLT LL m L F SG D IY SL INLISFANW L FN - AL AVA G L lw LRYK R PEMNR P 422
410 420
....*....|....*....|.
gi 727186703 394 YLM PL W p L PV VV a LL C CL YVL 414
Cdd:TIGR00911 423 IKV PL F - F PV FF - LL S CL FLI 441
frlA
PRK11357 amino acid permease;
17-419
7.07e-13
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 70.27
E-value: 7.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 17 LDV V MIT A S G V T PA S S IFV IAPLAIAN AG SGAF -- L S F L I AACVAAAIALC YAEL GA A H P SA G GE Y SII K ---- R LFGT L 90
Cdd:PRK11357 12 FWA V LAI A V G T T VG S G IFV SVGEVAKA AG TPWL tv L A F V I GGLIVIPQMCV YAEL ST A Y P EN G AD Y VYL K nags R PLAF L 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 91 C G LQTYLFILSA SL fvp AVL A TGA V PY L N talgtq F DASTAGM L TVLVGGICA I F ------- NIKAN A LLTGAFLVVEVA 163
Cdd:PRK11357 92 S G WASFWANDAP SL --- SIM A LAI V SN L G ------ F LTPIDPL L GKFIAAGLI I A fmllhlr SVEGG A AFQTLITIAKII 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 164 VLALIAW LG FSHPHQSTEILTAPVMLD A Q GS LAP vslpl IV A MVGVALF SY N G YGAAV YM AEDMREQ G RP M AI A IMLT l A 243
Cdd:PRK11357 163 PFTIVIG LG IFWFKAENFAAPTTTAIG A T GS FMA ----- LL A GISATSW SY T G MASIC YM TGEIKNP G KT M PR A LIGS - C 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 244 IV VLV ELVPFTALLI G SPSLTEM A KQAD P VGYVV T ELG -- G P T LARV V SGAIYLSVFNAIIAI V AQFS R MMF A SGR D GFW 321
Cdd:PRK11357 237 LL VLV LYTLLALVIS G LMPFDKL A NSET P ISDAL T WIP al G S T AGIF V AITAMIVILGSLSSC V MYQP R LEY A MAK D NLF 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 322 LPA F NR alki I HP RFG TP WIATL L F G VPSALLA F C SDL E SL TSFTVILLLLVYIIMAVAALIS R R R RHFHHPYLM P LWP L 401
Cdd:PRK11357 317 FKC F GH ---- V HP KYN TP DVSII L Q G ALGIFFI F V SDL T SL LGYFTLVMCFKNTLTFGSIIWC R K R DDYKPLWRT P AFG L 392
410
....*....|....*...
gi 727186703 402 PVVV A LLCC L YVLWTILI 419
Cdd:PRK11357 393 MTTL A IASS L ILVASTFV 410
AA_permease
pfam00324 Amino acid permease;
18-414
3.65e-07
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 52.32
E-value: 3.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 18 D V V MI TAS GV TPAS s I FV IAPLAIAN AG - S GA F L SF LI AAC V AAAIA L CYA E LGAAH P SA GG E Y SIIK R LF G TLC G LQ T Y 96
Cdd:pfam00324 1 H V Q MI ALG GV IGTG - L FV GSGSVLGQ AG p A GA L L GY LI SGV V IFLVM L SLG E ISTNG P VS GG F Y TYAS R FL G PSL G FA T G 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 97 LFILSASLF V P A VLA T G A VPYLN -- TALGTQFDASTA G MLTVLVGG I CAIFNI K ANALLT ga F LVVEVAVL A L I AWLGFS 174
Cdd:pfam00324 80 WNYWLSWIT V L A LEL T A A SILIQ fw ELVPDIPYLWVW G AVFLVLLT I INLVGV K WYGEAE -- F WFALIKII A I I GFIIVG 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 175 - HPHQSTEILTAPVMLDAQGSLAPVSL P ----- LIVAMVGV A L F SYN G YGAAVYM A EDMREQGRPMAI AI MLT ------- 241
Cdd:pfam00324 158 i ILLSGGNPNDGAIFRYLGDNGGKNNF P pgfgk GFISVFVI A F F AFT G IELVGIA A GEVKNPEKSIPK AI LQV iwritif 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 242 -- L AIVVLVE LVP FTALLIGSP S LT emak Q A D P VGYVVTE LG GPT LA RVVSGA I YLSVFN A IIAIVAQF SRM MFASG RDG 319
Cdd:pfam00324 238 yi L SLLAIGL LVP WNDPGLLND S AS ---- A A S P FVIFFKF LG ISG LA PLINAV I LTAALS A ANSSLYSG SRM LYSLA RDG 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 320 F w L P A F NR alki IHPRF G T P WI A T L LFG V P S A L LAFCSD L ESLTS F TVI L LLLVYIIMA V AA LIS ------------ RR R 387
Cdd:pfam00324 314 L - A P K F LK ---- KVDKR G V P LR A I L VSM V I S L L ALLLAS L NPAIV F NFL L AISGLSGLI V WG LIS lshlrfrkafky QG R 388
410 420
....*....|....*....|....*..
gi 727186703 388 RHFHH P YLM PL W PL P V VVA L LCCLYV L 414
Cdd:pfam00324 389 SIDEL P FKA PL G PL G V ILG L AAIIII L 415
PRK11021
PRK11021 putative transporter; Provisional
33-411
6.32e-07
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 51.45
E-value: 6.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 33 I F VIAP LA IAN AG SGAFLSFLIAACVAAA IA LCY A E LG AAH P S AGG EYSIIKRL FG - T L CGLQTY LF ILSASLFV PA V L A 111
Cdd:PRK11021 19 V F AVPA LA ALV AG NNSLWAWPLLILLIFP IA IVF A R LG RHF P H AGG PAHFVGMA FG p R L GRVTGW LF LSVIPVGL PA A L Q 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 112 T g A VPYLNTA lgtq F DA S TAGM L TVLVGGICAIF ----- NIKAN A L L TGAFLVVE VA VLAL I A W L G FSH P HQ stei LTA P 186
Cdd:PRK11021 99 I - A AGFGQAL ---- F GW S SWQL L LAELLTLALLW llnlr GASSS A N L QTVIALLI VA LVVA I W W A G DIK P AD ---- IPF P 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 187 vmldaqg SLAPVSLPLIV A MV GV ALFSYN G YG A AVYM A EDMREQG R PMAI A I M LT L AIVV LV ELV p F T ALLIGS P SLTEM 266
Cdd:PRK11021 170 ------- APGSIEWSGLF A AL GV MFWCFV G IE A FAHL A SEFKNPE R DFPR A L M IG L LLAG LV YWA - C T VVVLHF P AYGDK 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 267 AKQ A DPVGYVVTE L G G PTLAR V VSGAI YL SV F NAIIAIVAQ F S R MMFASG R D G fwlp AFNRA L KIIHP R f G T P WI A TLLF 346
Cdd:PRK11021 242 QAA A ASLPGIFVQ L F G GYALW V ICVIG YL AC F ASVNIYTQS F A R LVWSQA R E G ---- RPPSY L ARLSA R - G V P VN A LNAV 316
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 727186703 347 GVPS A LLAFCS ----- D LE S L TSFTVILLL L V Y II -- M A VAA L ISR R R R hfhhpylmplw PL P V VVA LLC C L 411
Cdd:PRK11021 317 LGCC A VSILLI yalgl N LE A L IAYANGIFV L I Y LL cm L A ACK L LKG R Y R ----------- PL A V LGC LLC L L 377
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
212-396
4.27e-06
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 48.97
E-value: 4.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 212 F S YN GY GAAVY MAE DMREQGRPMAI AI MLTL AI VVLVELVPFTA L L -- I G SPSLTEMAKQAD P VGYVVTE - LG GPTL A RV 288
Cdd:TIGR00907 228 W S MT GY DGTAH MAE EIENPEVVGPR AI IGAV AI GIVTGFCFNIV L F fs M G DIDSLISSTTGQ P IAQIFYN a LG NKAG A IF 307
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 289 VSGA I YLSV F NAI I AIVAQF SRM MF A SG RDG F w LP a F NRALKIIH PR FGT P WI A TL L FG V PSA L ----- L AFCSDLESLT 363
Cdd:TIGR00907 308 LLCL I LVTS F FCA I TCMTAN SRM IY A FS RDG G - LP - F SPLWSRVN PR TQV P LN A VW L SA V WII L igllg L GSSTAFQAIF 385
170 180 190
....*....|....*....|....*....|...
gi 727186703 364 S FTVIL L LLV Y I I MAVAA L ISR R RRHFHH P YLM 396
Cdd:TIGR00907 386 S VCTVA L DVS Y V I PIICK L AKG R NTIAPG P FWL 418
PRK10644
PRK10644 arginine/agmatine antiporter;
20-418
5.78e-05
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain]
Cd Length: 445
Bit Score: 45.17
E-value: 5.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 20 V MITAS G VTPA S SI F VI a P LAI A NA G SG A FLSF L IAACV A AAIALC YA ELGAAH PS A GG E Y SIIK R L FG TLC G L QT YLFI 99
Cdd:PRK10644 15 V TLMVA G NIMG S GV F LL - P ANL A ST G GI A IYGW L VTIIG A LGLSMV YA KMSSLD PS P GG S Y AYAR R C FG PFL G Y QT NVLY 93
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 100 LS A SLFVPAVLATGA V P YL NTALGTQF D ASTAGMLT V L V GG I CAIF NI KANALL ------ TGAFLVVEVAVL A LIA W LG F 173
Cdd:PRK10644 94 WL A CWIGNIAMVVIG V G YL SYFFPILK D PLVLTITC V V V LW I FVLL NI VGPKMI trvqav ATVLALIPIVGI A VFG W FW F 173
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 174 S hphqsteilt APVMLD A QGSLAPVSLPL I VAMVG V A L F S YN G YGA A VYM A EDMREQG R PMA I --------- A IMLT L AI 244
Cdd:PRK10644 174 R ---------- GETYMA A WNVSGLGTFGA I QSTLN V T L W S FI G VES A SVA A GVVKNPK R NVP I atiggvlia A VCYV L SS 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 245 VVLVELV P FT AL LIGSPSLTEM A KQ A dpvgyvvte LG G p T LARV VS GAIYLSVFNAI --- IAIVA Q FSR mmf A SGR DG FW 321
Cdd:PRK10644 244 TAIMGMI P NA AL RVSASPFGDA A RM A --------- LG D - T AGAI VS FCAAAGCLGSL ggw TLLAG Q TAK --- A AAD DG LF 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 322 L P A F N R AL K I ihprf GTP WIAT L LF GV PSALLAFC S DLES ------- LT S FT VI LL L LV Y IIMAV A A L ISRRRRHFHH py 394
Cdd:PRK10644 311 P P I F A R VN K A ----- GTP VAGL L IV GV LMTIFQLS S ISPN askefgl VS S VS VI FT L VP Y LYTCA A L L LLGHGHFGKA -- 383
410 420
....*....|....*....|....
gi 727186703 395 lmpl W P LPVV V A L LCCL Y VL W TIL 418
Cdd:PRK10644 384 ---- R P AYLA V T L IAFV Y CI W AVV 403
PRK10238
PRK10238 aromatic amino acid transporter AroP;
20-384
7.31e-03
aromatic amino acid transporter AroP;
Pssm-ID: 182324 [Multi-domain]
Cd Length: 456
Bit Score: 38.78
E-value: 7.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 20 VMIT A S G VTPASSI F VIAPLA I AN AG S G AF L SFL IA ACV A AA I ALCYA E LGAAH P S AG GEYSIIKRLF G TLC G LQTYLFI 99
Cdd:PRK10238 19 IQLI A L G GAIGTGL F LGSASV I QS AG P G II L GYA IA GFI A FL I MRQLG E MVVEE P V AG SFSHFAYKYW G SFA G FASGWNY 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 100 LSASLF V PAVLA T GAVP Y LNTALGTQFDAST A GMLT V LVGG I c AIF N I K ANALLTGA F LVVE V - AV L A L I --- A WL G FS H 175
Cdd:PRK10238 99 WVLYVL V AMAEL T AVGK Y IQFWYPEIPTWVS A AVFF V VINA I - NLT N V K VFGEMEFW F AIIK V i AV V A M I ifg G WL L FS G 177
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 176 --- P HQSTEI L TA pvmlda QG SLA P VSLPLI V A M VGVAL FS YN G YG - AAVYM AE - D MR EQ GR P M A ------- I A I MLTLA 243
Cdd:PRK10238 178 ngg P QATVSN L WD ------ QG GFL P HGFTGL V M M MAIIM FS FG G LE l VGITA AE a D NP EQ SI P K A tnqviyr I L I FYIGS 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727186703 244 IV VL VE L V P F T alligspslt EMAKQAD P VGYVVT ELG GPTL A RVVSGAIYLSVFNAIIAI V AQF SRM M F ASGRD G fwlp 323
Cdd:PRK10238 252 LA VL LS L M P W T ---------- RVTADTS P FVLIFH ELG DTFV A NALNIVVLTAALSVYNSC V YCN SRM L F GLAQQ G ---- 317
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 727186703 324 AFNR AL KIIHP R f G T P WIAT L LFGVPS AL LAFCSD L ESLTS F TVILL L L V YIIMAVA A L IS 384
Cdd:PRK10238 318 NAPK AL ASVDK R - G V P VNTI L VSALVT AL CVLINY L APESA F GLLMA L V V SALVINW A M IS 377
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
