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Conserved domains on  [gi|727177992|ref|WP_033641742|]
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MULTISPECIES: TonB-dependent receptor [Serratia]

Protein Classification

TonB-dependent receptor family protein( domain architecture ID 11469151)

TonB-dependent receptor family protein such as Escherichia coli Fe(3+) dicitrate transport protein FecA which is the outer membrane receptor protein in the Fe(3+) dicitrate transport system

Gene Ontology:  GO:0038023|GO:0009279|GO:0015343|GO:0015891
PubMed:  12948487
TCDB:  1.B.14

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
11-747 1.74e-89

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


:

Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 294.91  E-value: 1.74e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  11 LAVMSAMLPGAAlAADGTDVGTISVKGQSLGGGmmVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASG 90
Cdd:COG4772    5 LAAALLLAAAAA-AEAATTLETVVVTGSRAAEA--RLKDVPGSVSVVDREELENQA-ATSLREVLRRVPGVNVQEEDGFG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  91 LSgVDYTMRGMNSD---QIGLSMDGIPIND---SGNYAVYPNllgDAENLEEVFVTQGSSEAD-GPHigSSGGNIGLVTR 163
Cdd:COG4772   81 LR-PNIGIRGLGPRrsrGITLLEDGIPIAPapyGDPAAYYFP---DLERMERIEVLRGAAALRyGPQ--TVGGAINFVTR 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 164 RPAKDFGGFVKQTLGSNSLSKTFARLDtGEYNGFSNWLSYSHTEAKKWRGEGRLYSDKFEMNSLYEDGNGNSSNLVMKYN 243
Cdd:COG4772  155 TIPTAFGGELRVTGGSFGYRRTHASVG-GTVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYY 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 244 RQNNTNYNTLSKAQFQNDGRDTdyatTPEYNSRGQlnkyyklernpfENFTLSFTQKLQLRDNLSLTLQPYYYWGNGGSF 323
Cdd:COG4772  234 DEDANTPGGLTDAQFDADPRQS----YRPADQFDT------------RRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY 297

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 324 NGQtasvlsstSDRAGQYNLSNLKSNTYYRPSWtqtwrpGITTKLKWDIN---DQHSLDIGYWYERARQLQTQpfisikG 400
Cdd:COG4772  298 IRQ--------NTADPNTPGLGLRGNPRGYRSY------GIEPRLTHRFElggVPHTLEVGLRYHREEEDRKQ------Y 357

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 401 DGNPSQIwgppggsdqvkdANGNTVQGRNQYTiTPAQKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNAPEK-R 479
Cdd:COG4772  358 VNTYGQG------------RSGAGLRRDRRFS-ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDsG 424

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 480 KATYHEFLPNFSASYKVNQENQVFYNLTRNMRTP-PNYVLYNVGDSLSTKPELSWNHELGWRFQQEDML-LSATLFYMRY 557
Cdd:COG4772  425 SNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPtFGDLAYGNGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDY 504

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 558 SDRQISTTNAAGDY-EMMNIGNVENKGLELEWSGQL----PHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVP 632
Cdd:COG4772  505 DNELGSCSAAGGDRsTFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPV------FAGNRLPYVP 578

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 633 KNLLNMTLGYDDGLYYGSVSGKYVSAFYGDLTN------DEKIGGRTVFDLAAGVHLPvdkkivKSAALRFGISNLFDKE 706
Cdd:COG4772  579 RHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANtvadgsFGKIPSYTVLDLSASYDFG------KNLSLFAGVNNLFDKR 652

                        730       740       750       760
                 ....*....|....*....|....*....|....*....|.
gi 727177992 707 YLTSVRTTtfnaAPYGgvkastpyYNVGEERTFSVSLEATF 747
Cdd:COG4772  653 YIASRAPN----YAAG--------IRPGPPRTVYAGLRLKF 681
 
Name Accession Description Interval E-value
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
11-747 1.74e-89

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 294.91  E-value: 1.74e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  11 LAVMSAMLPGAAlAADGTDVGTISVKGQSLGGGmmVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASG 90
Cdd:COG4772    5 LAAALLLAAAAA-AEAATTLETVVVTGSRAAEA--RLKDVPGSVSVVDREELENQA-ATSLREVLRRVPGVNVQEEDGFG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  91 LSgVDYTMRGMNSD---QIGLSMDGIPIND---SGNYAVYPNllgDAENLEEVFVTQGSSEAD-GPHigSSGGNIGLVTR 163
Cdd:COG4772   81 LR-PNIGIRGLGPRrsrGITLLEDGIPIAPapyGDPAAYYFP---DLERMERIEVLRGAAALRyGPQ--TVGGAINFVTR 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 164 RPAKDFGGFVKQTLGSNSLSKTFARLDtGEYNGFSNWLSYSHTEAKKWRGEGRLYSDKFEMNSLYEDGNGNSSNLVMKYN 243
Cdd:COG4772  155 TIPTAFGGELRVTGGSFGYRRTHASVG-GTVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYY 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 244 RQNNTNYNTLSKAQFQNDGRDTdyatTPEYNSRGQlnkyyklernpfENFTLSFTQKLQLRDNLSLTLQPYYYWGNGGSF 323
Cdd:COG4772  234 DEDANTPGGLTDAQFDADPRQS----YRPADQFDT------------RRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY 297

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 324 NGQtasvlsstSDRAGQYNLSNLKSNTYYRPSWtqtwrpGITTKLKWDIN---DQHSLDIGYWYERARQLQTQpfisikG 400
Cdd:COG4772  298 IRQ--------NTADPNTPGLGLRGNPRGYRSY------GIEPRLTHRFElggVPHTLEVGLRYHREEEDRKQ------Y 357

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 401 DGNPSQIwgppggsdqvkdANGNTVQGRNQYTiTPAQKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNAPEK-R 479
Cdd:COG4772  358 VNTYGQG------------RSGAGLRRDRRFS-ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDsG 424

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 480 KATYHEFLPNFSASYKVNQENQVFYNLTRNMRTP-PNYVLYNVGDSLSTKPELSWNHELGWRFQQEDML-LSATLFYMRY 557
Cdd:COG4772  425 SNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPtFGDLAYGNGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDY 504

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 558 SDRQISTTNAAGDY-EMMNIGNVENKGLELEWSGQL----PHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVP 632
Cdd:COG4772  505 DNELGSCSAAGGDRsTFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPV------FAGNRLPYVP 578

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 633 KNLLNMTLGYDDGLYYGSVSGKYVSAFYGDLTN------DEKIGGRTVFDLAAGVHLPvdkkivKSAALRFGISNLFDKE 706
Cdd:COG4772  579 RHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANtvadgsFGKIPSYTVLDLSASYDFG------KNLSLFAGVNNLFDKR 652

                        730       740       750       760
                 ....*....|....*....|....*....|....*....|.
gi 727177992 707 YLTSVRTTtfnaAPYGgvkastpyYNVGEERTFSVSLEATF 747
Cdd:COG4772  653 YIASRAPN----YAAG--------IRPGPPRTVYAGLRLKF 681
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 55-747 9.76e-57

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 204.99  E-value: 9.76e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  55 STVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGLSGvdYTMRGMNSDQIGLSMDGIPINDSGNYAVYPNLLGDAENL 134
Cdd:cd01347    3 SVITAEDIEKQP-ATSLADLLRRIPGVSVTRGGGGGGST--ISIRGFGPDRTLVLVDGLPLASSNYGRGVDLNTIPPELI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 135 EEVFVTQG--SSEADGphiGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSlsktfaRLDTGEYNgFSNWLSYSHTEAkkwr 212
Cdd:cd01347   80 ERVEVLKGpsSALYGS---GAIGGVVNIITKRPTDEFGGSVTAGYGSDN------SGSSGGGG-FDVSGALADDGA---- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 213 GEGRLYsdkfemnsLYEDGNGNSSNLVMKYNRQNNTNYNTLSKAQFQNDGR-----DTDYATTPEYNSRGQLNKYY-KLE 286
Cdd:cd01347  146 FGARLY--------GAYRDGDGTIDGDGQADDSDEERYNVAGKLDWRPDDDtrltlDAGYQDQDADGPGGTLPANGtGSS 217

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 287 RNPFENFTLSFTQKLQLRDNLsltlqpYYYWGNGGSFNGQTASvLSSTSDRAGQYNLSNLKSNTYYRPSWTQTWRPGITT 366
Cdd:cd01347  218 LGGGPSSNTNGDRDWDYRDRY------RKRASLGLEHDLNDTG-WTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSG 290

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 367 KLKWDINDQHSLDIGYwyerarqlqTQPFisikGDGNPSQIWGppGGSDQVKDANGNTVQGrnqytitpaqkVWLQDTWF 446
Cdd:cd01347  291 YSSERDTTQLGFDAGL---------NAPF----GTGPVAHTLT--LGVEYRREELDEKQTA-----------LYAQDTIE 344

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 447 ATPDWTFVGGLAYQYVERKGDNRgslYNAPEKRKATYHEFLPNFSASYKVNQENQVFYNLTRNMRTPPNYVLYNVGDSLS 526
Cdd:cd01347  345 LTDDLTLTLGLRYDHYDQDSKDT---IAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGG 421

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 527 T--------KPELSWNHELGWRFQ-QEDMLLSATLFYMRYSDRQISTTNAAGD---YEMMNIGNVENKGLELEWSGQLPH 594
Cdd:cd01347  422 TaavgnpnlKPEKSKQYELGLKYDpGDGLTLSAALFRIDIKNEIVSTPTNTGLglvTVYVNGGKARIRGVELEASYDLTD 501

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 595 NFNYYTSYTYTQSKQKSDIVSNGGLPLptsgkevPNVPKNLLNMTLGYDDGLYYGSV--SGKYVSAFYGD---LTNDEKI 669
Cdd:cd01347  502 GLGLTGSYTYTDTEVKRTDGATTGNRL-------PGIPKHTANLGLDYELPDEGLTAggGVRYRGKQYADtanGNNTVKV 574

                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 727177992 670 GGRTVFDLAAGVHLPvdkkivKSAALRFGISNLFDKEYLTSVRTTTFNAAPYggvkastpyynVGEERTFSVSLEATF 747
Cdd:cd01347  575 PGYTLVDLSASYQFT------KNLTLRLGVNNLFDKDYYTSLSVRGSGLYGY-----------YGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 49-747 1.93e-42

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 164.12  E-value: 1.93e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   49 DSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGLSGvDYTMRGMNS--DQIGLSMDGIPINDSGNYAVYpn 126
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQ-AGSLSEALQRVPGVVVGGSGGTTQFG-NITIRGFGLevDIDNVYLDGVPLLSRGNLAIV-- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  127 llgDAENLEEVFVTQGSSEADGpHIGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSLSKTFARLD--TGEYNGFSNWLSYS 204
Cdd:TIGR01783  77 ---DPAMVERVEVLRGPASLLY-GGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGgpLGADGTFRGRLNGA 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  205 HTEAKKWRgegrlysdkfemnslyeDGNGNSSNLVMK-YNRQNNTNYNTLSKAQFQNDGRDTDYATTPeyNSRGQLNKYY 283
Cdd:TIGR01783 153 RQDGDSFY-----------------DGAGEETRLGATaTDWQLDDRTLLRLGAYYQKERDRGGYGGLP--ASGGTSGRDL 213

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  284 KLERNP-FENFTLSFT-QKLQLRDNLS-LTLQPYYYWGNGGSFNGQTasvlssTSDRAGQYNLSNlkSNTYYRPSWTQTW 360
Cdd:TIGR01783 214 SSDRYLgTSSNRNYDDrEYLSYGLSLEyQFNDVWTGKQNLRYSYFDT------DSNQVQASGYSS--DGGLFGRSLTVVN 285

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  361 RPGITTKLKWDINDQHS--------LDIGYWYERARQLQTQPFISIKGDGNPSQIWGPPGGSDQVKDANGNTVQgrnqyt 432
Cdd:TIGR01783 286 VKQDRVQIDAGLDGEFEtgpiehdlLLGVSYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSST------ 359

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  433 iTPAQKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRgslyNAPEKRKATYHEFLPNFSASYKVNqENQVFYNLTRNMRT 512
Cdd:TIGR01783 360 -TKALNGVALQRILLADKWTLTLGGRYDSVDVKSNNG----VAGSTGKRDDSQFTPSLGVAYKPT-DDWSLYASYAESFK 433

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  513 PPNYVLYNVGDSLS-TKPELSWNHELGWRFQQEDMLL-SATLFYMRYSDRqiSTTNAAGDYEMMNIGNVENKGLELEWSG 590
Cdd:TIGR01783 434 PGGYYPKGAGNSGDiLEPEKGKNYELGVRYDLGDSLLaTAALFRITKDNQ--LVQDPVNGTFSVNAGKTRNRGVELEARG 511

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  591 QLPHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVPKNLLNMTLGY----DDGLYYGSVSGKYVSAFYGDLTND 666
Cdd:TIGR01783 512 YLTPGLSLSAGYTYTDAEFTEDTNGD------TQGNTVPFVPKHTASLWASYappvGDNGLTLGGGVQYTGKAYVDGGNT 585

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  667 EKIGGRTVFDLAAGVHLPVDKKIVksaaLRFGISNLFDKEYLTSVRTTTFNAAPYggvkastpyynVGEERTFSVSLEAT 746
Cdd:TIGR01783 586 GKVPSYTVVDLSVRYDLTKKKNLT----LALNVNNLFDRDYYTSGYRWGPSAYIY-----------PGAPRTVGLSVSYD 650


                  .
gi 727177992  747 F 747
Cdd:TIGR01783 651 F 651
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 259-746 7.25e-40

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 153.39  E-value: 7.25e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  259 QNDGRDTDYATTPEYNSRGQLNKYYKLERNPFENFTLSFTQKLQLRDNLSLTLQPYYYWGNGGSFNGQ-TASVLSSTSDR 337
Cdd:pfam00593  13 TLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTlRLGLRYSSLDG 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  338 AGQYNLSNLKSNTYYRPSWTQTWRPGITTKLKWDINDQHSLDIGYWYerarqlQTQPFISIKGDGNPSQIWGPPGGSDQV 417
Cdd:pfam00593  93 DYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVEL------RTAGLDYRRLDDDAYDPYDPANPSSSS 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  418 KDANGNTVQGrnqytitpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNAPekrKATYHEFLPNFSASYKVN 497
Cdd:pfam00593 167 YSDTTTDSYG-----------LYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNF---SRSYSAFSPRLGLVYKPT 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  498 QENQVFYNLTRNMRTPPNYVLYNVGDSLST----------KPELSWNHELGWRFQQEDMLLSATLFYMRYSDRQISTTNA 567
Cdd:pfam00593 233 DNLSLYASYSRGFRAPSLGELYGSGSGGGGgavaggnpdlKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDG 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  568 AGD----YEMMNIGNVENKGLELEWSGQLPHNFNYYTSYTYTQSKQKSDIVsngglplpTSGKEVPNVPKNLLNMTLGYD 643
Cdd:pfam00593 313 PGLggtvYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADAD--------DTGNPLPNVPRHTANLGLTYD 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  644 D--GLYYGSVSGKYV---SAFYGDLTNDEKIGGRTVFDLAAGvhlpvdKKIVKSAALRFGISNLFDKEYLTsvrtttfna 718
Cdd:pfam00593 385 FplGGWGARLGARYVgsgERRYGDAANTFKTPGYTLVDLSAG------YRLNKNLTLRLGVNNLFDKYYKR--------- 449

                         490       500
                  ....*....|....*....|....*...
gi 727177992  719 apYGGVKASTPYYNVGEERTFSVSLEAT 746
Cdd:pfam00593 450 --YYSSGGGNLGGYPGPGRTFYLGLSYK 475
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
 11-727 6.23e-13

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 72.48  E-value: 6.23e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  11 LAVMSAMLPGAALA------ADGTDVGTISVKG-------QSLGggmmvqddsakaRSTVTKEAMDKMPSAANAIDKLKF 77
Cdd:PRK13528   9 LWLLTVLLVGLNSPvsaaesSDDDNGETMVVEAtaeqelkQQPG------------VSIITAEDIKKRPPVNDLSDIIRK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  78 TPGLNVNSNDASGLSG----VDytMRGMNSDQIGLSMDGIPInDSGNYAVYP-----NLLGD-----AENLEEVFVTQGS 143
Cdd:PRK13528  77 MPGVNLTGNSASGTRGnnrqID--IRGMGPENTLILIDGVPV-TSRNSVRYSwrgerDTRGDtnwvpPEMVERIEVIRGP 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 144 SEAD-GPhiGSSGGNIGLVTRRPAKDFGG----FVKQTLGSN---------SLSKTFARlDTGEYNGFSNwlsYSHTEAK 209
Cdd:PRK13528 154 AAARyGS--GAAGGVVNIITKRPTNDWHGslslYTNQPESSKegatrranfSLSGPLAG-DALTMRLYGN---LNKTDAD 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 210 KW---RGEGRLYSDKFE------MNSL--YEDGNGNSSNLVMKYNRQNNTnyntlskaqFQNDGRDTDYATTPE--YNSR 276
Cdd:PRK13528 228 SWdinSSAGTKNAAGREgvrnkdINGVlsWKMTPQQILDFEAGYSRQGNI---------YAGDTQNSNSSAVTEslAKSG 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 277 GQLNKYYklernpfenftlsftqklqlRDNLSLTLQPYYYWGnggsfngQTASVLS--STSDRAGQYNLS-----NLKSN 349
Cdd:PRK13528 299 KETNRLY--------------------RQNYGLTHNGIWDWG-------QSRLGFYyeKTNNTRMNEGLAgggegRITAD 351

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 350 TYYRPSWTQTWRPGITTKLKWDINDQHSLDIGYWYERArQLQtQPFiSIKGDGNPSQIWGPPGGSDQVKDANGNTVQGrn 429
Cdd:PRK13528 352 QTFTTSRLESYRTSGELNVPLNWLFEQTLTVGAEWNRD-ELN-DPS-STSLTVKDGDIGGISGSAADRSSKNKSEISA-- 426

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 430 qytitpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNrgslynapekrkatyheFLPNFSASYKVNQENQVFYNLTRN 509
Cdd:PRK13528 427 ---------LYVEDNIEPVPGTNLIPGLRFDYHSEFGSN-----------------WSPSLNLSQELGDYFKVKAGIARA 480

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 510 MRTP------PNYVLYNVG-----------------DSLStkPELSWNHELGWRFQQEDMLLSATLFYMRYSDRQISTTN 566
Cdd:PRK13528 481 FKAPnlyqssEGYLLYSRGngcpkditsggcylvgnKNLD--PEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDD 558

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 567 AAGDYEM-MNIGNVEN--KGLELEWSGQL-----PHNFNYYTSYTY-TQSKQKSDivsngGLPLPTsgkevpnVPKNLLN 637
Cdd:PRK13528 559 VIGRTASgAYILQWQNggKAVVEGLEGNLlvplmKDRLNWNTNATYmITSEQKDT-----GNPLSV-------IPKYTIN 626

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 638 MTLG--YDDGL-------YYGSVSGKYVSAFYGDLTNDE---KIGGRTVFDLAAGVhlpvdkKIVKSAALRFGISNLFDK 705
Cdd:PRK13528 627 STLDwqITQALsanvnwtLYGKQKPRTHAESRSEETGGLsgkELGAYSLVGVNVNY------DINKNLRLNVGVSNLFDK 700

                        810       820
                 ....*....|....*....|....*.
gi 727177992 706 E-YLTSVRTTTFNA---APYGGVKAS 727
Cdd:PRK13528 701 QiYREGEGANTYNEpgrAYYAGVTAS 726
 
Name Accession Description Interval E-value
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
11-747 1.74e-89

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 294.91  E-value: 1.74e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  11 LAVMSAMLPGAAlAADGTDVGTISVKGQSLGGGmmVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASG 90
Cdd:COG4772    5 LAAALLLAAAAA-AEAATTLETVVVTGSRAAEA--RLKDVPGSVSVVDREELENQA-ATSLREVLRRVPGVNVQEEDGFG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  91 LSgVDYTMRGMNSD---QIGLSMDGIPIND---SGNYAVYPNllgDAENLEEVFVTQGSSEAD-GPHigSSGGNIGLVTR 163
Cdd:COG4772   81 LR-PNIGIRGLGPRrsrGITLLEDGIPIAPapyGDPAAYYFP---DLERMERIEVLRGAAALRyGPQ--TVGGAINFVTR 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 164 RPAKDFGGFVKQTLGSNSLSKTFARLDtGEYNGFSNWLSYSHTEAKKWRGEGRLYSDKFEMNSLYEDGNGNSSNLVMKYN 243
Cdd:COG4772  155 TIPTAFGGELRVTGGSFGYRRTHASVG-GTVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYY 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 244 RQNNTNYNTLSKAQFQNDGRDTdyatTPEYNSRGQlnkyyklernpfENFTLSFTQKLQLRDNLSLTLQPYYYWGNGGSF 323
Cdd:COG4772  234 DEDANTPGGLTDAQFDADPRQS----YRPADQFDT------------RRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY 297

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 324 NGQtasvlsstSDRAGQYNLSNLKSNTYYRPSWtqtwrpGITTKLKWDIN---DQHSLDIGYWYERARQLQTQpfisikG 400
Cdd:COG4772  298 IRQ--------NTADPNTPGLGLRGNPRGYRSY------GIEPRLTHRFElggVPHTLEVGLRYHREEEDRKQ------Y 357

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 401 DGNPSQIwgppggsdqvkdANGNTVQGRNQYTiTPAQKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNAPEK-R 479
Cdd:COG4772  358 VNTYGQG------------RSGAGLRRDRRFS-ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDsG 424

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 480 KATYHEFLPNFSASYKVNQENQVFYNLTRNMRTP-PNYVLYNVGDSLSTKPELSWNHELGWRFQQEDML-LSATLFYMRY 557
Cdd:COG4772  425 SNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPtFGDLAYGNGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDY 504

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 558 SDRQISTTNAAGDY-EMMNIGNVENKGLELEWSGQL----PHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVP 632
Cdd:COG4772  505 DNELGSCSAAGGDRsTFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPV------FAGNRLPYVP 578

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 633 KNLLNMTLGYDDGLYYGSVSGKYVSAFYGDLTN------DEKIGGRTVFDLAAGVHLPvdkkivKSAALRFGISNLFDKE 706
Cdd:COG4772  579 RHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANtvadgsFGKIPSYTVLDLSASYDFG------KNLSLFAGVNNLFDKR 652

                        730       740       750       760
                 ....*....|....*....|....*....|....*....|.
gi 727177992 707 YLTSVRTTtfnaAPYGgvkastpyYNVGEERTFSVSLEATF 747
Cdd:COG4772  653 YIASRAPN----YAAG--------IRPGPPRTVYAGLRLKF 681
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
30-721 3.37e-80

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 269.39  E-value: 3.37e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  30 VGTISVKGQSLGggmMVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNdasGLSGVDYTMRGMNSDQ--IG 107
Cdd:COG1629    1 LEEVVVTATRTD---ESLQDVPGSVSVISREQLEDQP-ATDLGDLLRRVPGVSVTSA---GGGAGQISIRGFGGGGnrVL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 108 LSMDGIPINDSGNYAVYPNLLgDAENLEEVFVTQGSSEADgPHIGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSLSKTFA 187
Cdd:COG1629   74 VLVDGVPLNDPSGGDGGLSYI-DPEDIERVEVLRGPSSAL-YGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASL 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 188 RLDTGEyNGFSNWLSYSHTEAKKWRGEGRLYSDKFEMNSLYEDGNGNSSNLVMKYNRQNNTNYNTLSKAQFQNDGRDTDY 267
Cdd:COG1629  152 SLSGGN-GKLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDG 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 268 ATTPEYNSRGQLNKYYklernpfeNFTLSFTQklqLRDNLSLTLQPYYywgngGSFNGQTASVLSSTSDRAGQYNLSNLK 347
Cdd:COG1629  231 TNPYSNDTDDNTRDRY--------SLSLEYEH---LGDGLKLSASAYY-----RYDDTDLDSDFTPTPADGGTLEQTDFD 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 348 SNTYyrpswtqtwrpGITTKLKWD--INDQHSLDIGYWYERARQLQTQPFISIkgdgnpsqiwgppgGSDQVKDANGNTV 425
Cdd:COG1629  295 NRTY-----------GLELRLTYDlgFGGKHTLLVGLDYQRQDLDGSGYPLDL--------------GSGSLPTLTSGAD 349

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 426 QGRNQYTITpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSlYNAPEKRKATYHEFLPNFSASYKVNQENQVFYN 505
Cdd:COG1629  350 DDGTTTSLA----LYAQDTYKLTDKLTLTAGLRYDYVSYDVDDTVT-GTDSASGSRSYSAFSPSLGLTYQLSPNLSLYAS 424

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 506 LTRNMRTPPNYVLYNVGDSLST------KPELSWNHELGWRFQQED--MLLSATLFYMRYSDRQISTT---NAAGDYEMM 574
Cdd:COG1629  425 YSRGFRAPTFGELYANGTDPYSvgnpdlKPETSTNYELGLRYRLLDgrLSLSLALFYSDVDNEILSVPlpnDSGFSTYYT 504

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 575 NIGNVENKGLELEWSGQLPHNFNYYTSYTYTQSKQKSDivsnGGLPLPTSGKEVPNVPKNLLNMTLGYDDGL-YYGSVSG 653
Cdd:COG1629  505 NAGKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDD----TDGSADLDGNRLPGVPPLTANLGLTYEFPGgWSLGLGV 580

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 727177992 654 KYVSAFYGDLTNDEKI-GGRTVFDLAAGvhlpvdKKIVKSAALRFGISNLFDKEYLTSVRTTTFNAAPY 721
Cdd:COG1629  581 RYVGDRYLDDANTQGApGGYTLVDLGAG------YRFGDNLTLSLGVDNLFDKKYATSLSVRASNVRGF 643
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 55-747 9.76e-57

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 204.99  E-value: 9.76e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  55 STVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGLSGvdYTMRGMNSDQIGLSMDGIPINDSGNYAVYPNLLGDAENL 134
Cdd:cd01347    3 SVITAEDIEKQP-ATSLADLLRRIPGVSVTRGGGGGGST--ISIRGFGPDRTLVLVDGLPLASSNYGRGVDLNTIPPELI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 135 EEVFVTQG--SSEADGphiGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSlsktfaRLDTGEYNgFSNWLSYSHTEAkkwr 212
Cdd:cd01347   80 ERVEVLKGpsSALYGS---GAIGGVVNIITKRPTDEFGGSVTAGYGSDN------SGSSGGGG-FDVSGALADDGA---- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 213 GEGRLYsdkfemnsLYEDGNGNSSNLVMKYNRQNNTNYNTLSKAQFQNDGR-----DTDYATTPEYNSRGQLNKYY-KLE 286
Cdd:cd01347  146 FGARLY--------GAYRDGDGTIDGDGQADDSDEERYNVAGKLDWRPDDDtrltlDAGYQDQDADGPGGTLPANGtGSS 217

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 287 RNPFENFTLSFTQKLQLRDNLsltlqpYYYWGNGGSFNGQTASvLSSTSDRAGQYNLSNLKSNTYYRPSWTQTWRPGITT 366
Cdd:cd01347  218 LGGGPSSNTNGDRDWDYRDRY------RKRASLGLEHDLNDTG-WTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSG 290

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 367 KLKWDINDQHSLDIGYwyerarqlqTQPFisikGDGNPSQIWGppGGSDQVKDANGNTVQGrnqytitpaqkVWLQDTWF 446
Cdd:cd01347  291 YSSERDTTQLGFDAGL---------NAPF----GTGPVAHTLT--LGVEYRREELDEKQTA-----------LYAQDTIE 344

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 447 ATPDWTFVGGLAYQYVERKGDNRgslYNAPEKRKATYHEFLPNFSASYKVNQENQVFYNLTRNMRTPPNYVLYNVGDSLS 526
Cdd:cd01347  345 LTDDLTLTLGLRYDHYDQDSKDT---IAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGG 421

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 527 T--------KPELSWNHELGWRFQ-QEDMLLSATLFYMRYSDRQISTTNAAGD---YEMMNIGNVENKGLELEWSGQLPH 594
Cdd:cd01347  422 TaavgnpnlKPEKSKQYELGLKYDpGDGLTLSAALFRIDIKNEIVSTPTNTGLglvTVYVNGGKARIRGVELEASYDLTD 501

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 595 NFNYYTSYTYTQSKQKSDIVSNGGLPLptsgkevPNVPKNLLNMTLGYDDGLYYGSV--SGKYVSAFYGD---LTNDEKI 669
Cdd:cd01347  502 GLGLTGSYTYTDTEVKRTDGATTGNRL-------PGIPKHTANLGLDYELPDEGLTAggGVRYRGKQYADtanGNNTVKV 574

                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 727177992 670 GGRTVFDLAAGVHLPvdkkivKSAALRFGISNLFDKEYLTSVRTTTFNAAPYggvkastpyynVGEERTFSVSLEATF 747
Cdd:cd01347  575 PGYTLVDLSASYQFT------KNLTLRLGVNNLFDKDYYTSLSVRGSGLYGY-----------YGPGRTYYLSVSYKF 635
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
55-747 3.67e-49

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 183.54  E-value: 3.67e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  55 STVTKEAMDKMpSAANAIDKLKFTPGLNVNSNDasGLSGVDYTMRGMNSdQIGLSMDGIPinDSGNYAVypnllgDAENL 134
Cdd:COG4774   14 TVVTRELIEDQ-GATSLADALRNVPGVTFGAGE--GGNGDSFSIRGFSA-SGDIYVDGLR--DPGQYRR------DTFNL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 135 EEVFVTQGSSEAD-GPhiGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSlsktFARLdTGEYNG-FSNWLSYshteakkwr 212
Cdd:COG4774   82 ERVEVLKGPASVLyGR--GSPGGVINLVTKRPTDEPFTEVTLTYGSDG----QRRA-TLDVNGpLGDDLAY--------- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 213 gegRLysdkfemNSLYEDGNGNSSNlvMKYNRQN---------NTNYNTLSKAQFQNDGRDTDYATTPEYNSR------- 276
Cdd:COG4774  146 ---RL-------NGMYRDSDSYRDG--VDNDRWGiapsltwrlGDRTRLTLDYEYQDDDRTPDYGVPAVANGRpvdvdrs 213

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 277 ---GQLNKYYKLERNpfeNFTLSFTQKLqlRDNLSLTLQPYYYWGNGGSFNgqtasVLSSTSDRAGQYNLSnlksnTYYR 353
Cdd:COG4774  214 tfyGQPDDYSDSETD---SATLRLEHDF--NDNWTLRNALRYSDYDRDYRN-----TYPTGGNATGTVTRS-----AYRR 278

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 354 PSWTQTWrpGITTKLKWDIND---QHSLDIGYWYERARQLQTQpfISIKGDGNPSQIWGP-PGGSDQVKDANGNTVQGRN 429
Cdd:COG4774  279 DQDNDTL--SNQTDLTGKFDTggvKHTLLAGVEYSREDSDNAR--YSGGGTAPTVNLYNPvYGAPVTGPTLGGADNDSRT 354

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 430 QYTitpaqKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSlynAPEKRKATYHEFLPNFSASYKVNQENQVFYNLTRN 509
Cdd:COG4774  355 DTT-----GLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTT---GATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTS 426

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 510 MrTPPNYVLYNVGDSLSTKPELSWNHELG--WRFQQEDMLLSATLFYMRYSDRQISTTNAAGDYEmmNIGNVENKGLELE 587
Cdd:COG4774  427 F-NPGGGAPSLSNAGQALDPEKSRQYEVGvkWDLLDGRLSLTAALFRIEKTNVRTTDPANPGVYV--QTGEQRSRGVELE 503

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 588 WSGQLPHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVPKNLLNMTLGYD---DGLYYGsVSGKYVSAFYGDLT 664
Cdd:COG4774  504 ATGELTPGWSVLAGYTYLDAEITKSANAA------NVGNRLPNVPRHSASLWTTYDlplPGLTLG-GGVRYVGSRYADAA 576

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 665 NDEKIGGRTVFDLAAGVhlpvdkKIVKSAALRFGISNLFDKEYLTSVRtttfnaapyggvkaSTPYYNVGEERTFSVSLE 744
Cdd:COG4774  577 NTVKLPSYTRFDAGASY------RLNKNLTLRLNVNNLTDKRYYASAY--------------GSGYVTPGAPRTVLLSAS 636


                 ...
gi 727177992 745 ATF 747
Cdd:COG4774  637 YRF 639
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
 21-747 6.79e-47

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 177.78  E-value: 6.79e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  21 AALAADGTDVGTISVKGQSLGGGMMVQDDSA-------KAR------STVTKEAMDKMpSAANAIDKLKFTPGLNVNSND 87
Cdd:COG4773   23 AAAAAEATTLPEVTVTGTAEGTGGYTAKSSStatkldtPLRetpqsvSVVTRQLIEDQ-GATTLDDALRNVPGVTVSSYD 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  88 asGLSGVDYTMRGMNSDQIglSMDGIPINDSGNYAVypnllgDAENLE--EVF-----VTQGSseadgphiGSSGGNIGL 160
Cdd:COG4773  102 --GGGRDSFSIRGFSIDNY--LRDGLPLGGFGGGQP------DTANLErvEVLkgpagLLYGA--------GSPGGLVNL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 161 VTRRPAKDFGGFVKQTLGSNSLSKTfarldTGEYNGfsnWLsyshTEAKKWRGegRLysdkfemNSLYEDGNGNssnlvm 240
Cdd:COG4773  164 VTKRPTAEPQGEVSLSAGSWDTYRA-----TADVGG---PL----NEDGTLRY--RL-------NAAYEDGDSF------ 216

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 241 kYNRQNNTNYN-------------TLS-KAQFQNDGRDTDYATTPEYNSRGQL---------NKYYKLERNpfeNFTLSF 297
Cdd:COG4773  217 -RDGVDNRRTLiapsldwdltddtTLTlGAEYQDDDSTGDRGFLPLDGTLLDLprstnlgepWDYYDTETT---TLFAEL 292

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 298 TQKLQlrDNLSLTLQPYYYWGNggsFNGQTASVLSSTSDRAGQYNLSNLKSNTYYRpSWTqtwrpgITTKLKWDIND--- 374
Cdd:COG4773  293 EHRFN--DDWSLRANARYSDSD---RDGRSAYAYGAPDAATGTLTRYASARDGDSR-SDS------LDANLNGKFETggl 360

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 375 QHSLDIGYWYERARQLQTQpfisikGDGNPSQIWGPPGGSDQVKDANGNTVQGRNQYTitpaqKVWLQDTWFATPDWTFV 454
Cdd:COG4773  361 EHTLLVGADYSRYDSDSDS------ATAGTINIYNPVYGNLPEPDFDASDTDTTTRQT-----GLYAQDQISLTDRLSLL 429

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 455 GGLAYQYVERKGDNrgslYNAPEKRKATYHEFLPNFSASYKVNQENQVFYNLTRNMrTPPNYVLYNvGDSLstKPELSWN 534
Cdd:COG4773  430 LGGRYDWYETDSTN----RLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESF-EPQSGADNN-GNPL--DPETGKQ 501

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 535 HELG--WRFQQEDMLLSATLFYMRYSDRQISTTNAAGDYEmmNIGNVENKGLELEWSGQLPHNFNYYTSYTYTQSKQKSD 612
Cdd:COG4773  502 YEAGvkGELFDGRLNATLAVFDITQKNVATTDPDNPNFYV--QVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKD 579

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 613 IVSNgglplptSGKEVPNVPKNLLNMTLGYD------DGLYYGsVSGKYVSAFYGDLTNDEKIGGRTVFDLAAGVhlpvd 686
Cdd:COG4773  580 ADAL-------EGKRLTNVPRHTASLWTTYRfpsgalKGLGLG-GGVRYVGERYGDAANTFTLPSYTLVDAGARY----- 646

                        730       740       750       760       770       780
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 727177992 687 kKIVKSAALRFGISNLFDKEYLTSVRTTTfnaapyggvkastpYYNVGEERTFSVSLEATF 747
Cdd:COG4773  647 -DLGKNWTLQLNVNNLFDKKYYASSGSRG--------------YVYYGAPRNVRLSLSYKF 692
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
 9-680 1.27e-45

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 172.73  E-value: 1.27e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   9 IYLAVMSAMLPGAALAADGTDVGTISVKGQSLGggmMVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDA 88
Cdd:COG4771    6 LLLLLALAAQAADALAEDATELEEVVVTATRTE---QSLSDAPASVSVITAEEIEKLG-ATDLADALRLLPGVSVTRSGG 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  89 SGLSGvDYTMRGMNSDQIGLSMDGIPINDSGNYAVYPNLLGDAENLEEVFVTQGSSEAD-GPhiGSSGGNIGLVTRRPAK 167
Cdd:COG4771   82 RGGSS-GISIRGLGGDRVLVLIDGVPVNNPALGGGGDLSYIPPDDIERIEVIRGPASALyGS--DAIGGVINIITKKPTD 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 168 DFGGFVKQTLGSNSLSKTFARLDT-GEYNGFSNWLSYSHTEAKKWRgegrlysdkfemNSLYEDGNGNSsnlvmkynrqN 246
Cdd:COG4771  159 ELEGSVSLGYGSNGNGTYSGSLSLgGPGDKLSFLLSGSYRDRDGYL------------DYRNGGFVGNS----------G 216

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 247 NTNYNTLSKAQFQNDGRDTDYATTpEYNSRGQLNKYYKLERNPFENFTLSFTQKLQLRDNLSLTLQpyyywgngGSFNGQ 326
Cdd:COG4771  217 YERYNLNAKLGYRLSDNHRLSLSG-GYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGNYSLRYN--------GDLGDN 287

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 327 TASVLSSTSDRAGQYNLSNLKSNTYYRPSWTQTWrpGITTKLKWDINDQHSLDIGYWYERarqlqtqpfisikgdgnpsq 406
Cdd:COG4771  288 LDLSLYYSRTDRDSTNGSLGGSTGSFSDSDDTTY--GLELDLTYPLGGNHTLTLGAEYRY-------------------- 345

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 407 iwgppggsDQVKDANGNTVQGRNQYTITpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNrgslynapekrkaTYHEF 486
Cdd:COG4771  346 --------DDLDSSSFLGGADASRDTYG----LFAQDEWKLTDKLTLTAGLRYDYYSTFGAS-------------NYTAF 400

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 487 LPNFSASYKVNQENQVFYNLTRNMRTPPNYVLYNVGDSLST---------KPELSWNHELGWRFQQED--MLLSATLFYM 555
Cdd:COG4771  401 SPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGryvlgnpdlKPETSDNYELGLEYRLGNggLSLSLTGFYT 480

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 556 RYSDRQISTTNAAGD---YEMMNIGNVENKGLELEWSGQLPHNFNYYTSYTYTQSKQKSDivsngglplpTSGKEVPNVP 632
Cdd:COG4771  481 DIKDLIVLVPVGPGPgdvLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDG----------DTGEPLPNVP 550

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....
gi 727177992 633 KNLLNMTLGYD------DGLYYGSVSGKYVSAFYGdlTNDEKIGGRTVFDLAAG 680
Cdd:COG4771  551 PHKANLGLDYRlpkwwlLLLLTRYYGGRYVTPPSG--RLEGYTPGYTLLDLRAS 602
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 49-747 1.93e-42

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 164.12  E-value: 1.93e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   49 DSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGLSGvDYTMRGMNS--DQIGLSMDGIPINDSGNYAVYpn 126
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQ-AGSLSEALQRVPGVVVGGSGGTTQFG-NITIRGFGLevDIDNVYLDGVPLLSRGNLAIV-- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  127 llgDAENLEEVFVTQGSSEADGpHIGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSLSKTFARLD--TGEYNGFSNWLSYS 204
Cdd:TIGR01783  77 ---DPAMVERVEVLRGPASLLY-GGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGgpLGADGTFRGRLNGA 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  205 HTEAKKWRgegrlysdkfemnslyeDGNGNSSNLVMK-YNRQNNTNYNTLSKAQFQNDGRDTDYATTPeyNSRGQLNKYY 283
Cdd:TIGR01783 153 RQDGDSFY-----------------DGAGEETRLGATaTDWQLDDRTLLRLGAYYQKERDRGGYGGLP--ASGGTSGRDL 213

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  284 KLERNP-FENFTLSFT-QKLQLRDNLS-LTLQPYYYWGNGGSFNGQTasvlssTSDRAGQYNLSNlkSNTYYRPSWTQTW 360
Cdd:TIGR01783 214 SSDRYLgTSSNRNYDDrEYLSYGLSLEyQFNDVWTGKQNLRYSYFDT------DSNQVQASGYSS--DGGLFGRSLTVVN 285

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  361 RPGITTKLKWDINDQHS--------LDIGYWYERARQLQTQPFISIKGDGNPSQIWGPPGGSDQVKDANGNTVQgrnqyt 432
Cdd:TIGR01783 286 VKQDRVQIDAGLDGEFEtgpiehdlLLGVSYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSST------ 359

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  433 iTPAQKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRgslyNAPEKRKATYHEFLPNFSASYKVNqENQVFYNLTRNMRT 512
Cdd:TIGR01783 360 -TKALNGVALQRILLADKWTLTLGGRYDSVDVKSNNG----VAGSTGKRDDSQFTPSLGVAYKPT-DDWSLYASYAESFK 433

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  513 PPNYVLYNVGDSLS-TKPELSWNHELGWRFQQEDMLL-SATLFYMRYSDRqiSTTNAAGDYEMMNIGNVENKGLELEWSG 590
Cdd:TIGR01783 434 PGGYYPKGAGNSGDiLEPEKGKNYELGVRYDLGDSLLaTAALFRITKDNQ--LVQDPVNGTFSVNAGKTRNRGVELEARG 511

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  591 QLPHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVPKNLLNMTLGY----DDGLYYGSVSGKYVSAFYGDLTND 666
Cdd:TIGR01783 512 YLTPGLSLSAGYTYTDAEFTEDTNGD------TQGNTVPFVPKHTASLWASYappvGDNGLTLGGGVQYTGKAYVDGGNT 585

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  667 EKIGGRTVFDLAAGVHLPVDKKIVksaaLRFGISNLFDKEYLTSVRTTTFNAAPYggvkastpyynVGEERTFSVSLEAT 746
Cdd:TIGR01783 586 GKVPSYTVVDLSVRYDLTKKKNLT----LALNVNNLFDRDYYTSGYRWGPSAYIY-----------PGAPRTVGLSVSYD 650


                  .
gi 727177992  747 F 747
Cdd:TIGR01783 651 F 651
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 259-746 7.25e-40

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 153.39  E-value: 7.25e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  259 QNDGRDTDYATTPEYNSRGQLNKYYKLERNPFENFTLSFTQKLQLRDNLSLTLQPYYYWGNGGSFNGQ-TASVLSSTSDR 337
Cdd:pfam00593  13 TLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTlRLGLRYSSLDG 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  338 AGQYNLSNLKSNTYYRPSWTQTWRPGITTKLKWDINDQHSLDIGYWYerarqlQTQPFISIKGDGNPSQIWGPPGGSDQV 417
Cdd:pfam00593  93 DYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVEL------RTAGLDYRRLDDDAYDPYDPANPSSSS 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  418 KDANGNTVQGrnqytitpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNAPekrKATYHEFLPNFSASYKVN 497
Cdd:pfam00593 167 YSDTTTDSYG-----------LYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNF---SRSYSAFSPRLGLVYKPT 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  498 QENQVFYNLTRNMRTPPNYVLYNVGDSLST----------KPELSWNHELGWRFQQEDMLLSATLFYMRYSDRQISTTNA 567
Cdd:pfam00593 233 DNLSLYASYSRGFRAPSLGELYGSGSGGGGgavaggnpdlKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDG 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  568 AGD----YEMMNIGNVENKGLELEWSGQLPHNFNYYTSYTYTQSKQKSDIVsngglplpTSGKEVPNVPKNLLNMTLGYD 643
Cdd:pfam00593 313 PGLggtvYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADAD--------DTGNPLPNVPRHTANLGLTYD 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  644 D--GLYYGSVSGKYV---SAFYGDLTNDEKIGGRTVFDLAAGvhlpvdKKIVKSAALRFGISNLFDKEYLTsvrtttfna 718
Cdd:pfam00593 385 FplGGWGARLGARYVgsgERRYGDAANTFKTPGYTLVDLSAG------YRLNKNLTLRLGVNNLFDKYYKR--------- 449

                         490       500
                  ....*....|....*....|....*...
gi 727177992  719 apYGGVKASTPYYNVGEERTFSVSLEAT 746
Cdd:pfam00593 450 --YYSSGGGNLGGYPGPGRTFYLGLSYK 475
TonB-hemlactrns TIGR01786
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ...
 32-747 1.48e-33

TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273808 [Multi-domain]  Cd Length: 715  Bit Score: 137.54  E-value: 1.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   32 TISVKGQSLGGGMMVQDDSAKA-RSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGLSGvdYTMRGMNSDQIGLSM 110
Cdd:TIGR01786   2 TITVTATRTADPQRRDLSVTPAsVSVISREQLKSQQ-VRNLRDLLRYEPGVSVVEGGRGGSQG--INIRGLDKNRVAVLV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  111 DGIPINDS---GNYAVYPNLLGDAENLEEVFVTQGSSEADGPHiGSSGGNIGLVTR------RPAKDFGGFVKQTLGSNS 181
Cdd:TIGR01786  79 DGIRQNTSyggQGSTFYAINSIDPELIKSIEIVKGASSSLYGS-GALGGVVAFRTKdaadllKPGKDLGGLSKLGYSSAN 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  182 LSKTFARLDTGEYNGFSNWLSYSHTEAKKWR----GEGRLYSDKFEMNSLyedgNGNSSNLVMKYNRQ-NNTNYNTLSKA 256
Cdd:TIGR01786 158 NRFTQSVAAAGRNDDVDALVQATYRRGHELKngnkANIGNESKRSKPNPS----DYKSQSFLAKLGWQlNDAHRLGLSLE 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  257 QFQNDGrDTDYATTPEYNsrgqLNKYYKLERNPFENFTLSFTQKLqlRDNLSLTLQPYYYWGNGGSFNGQTASVLSSTSD 336
Cdd:TIGR01786 234 YTQTDY-DEPEMTNTSYL----TKPLGAPLLSSTVVLGDSKTRDR--RTGLDYELNPDNSWLDTVKLALDKQYIQLYNYL 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  337 RAGQYNLSNLKSNTYYRPSWTQTWRPGITTKLkWDINDQHSLDIGYWYERARQLQTQPFisikgDGNPSQIWGPpggSDQ 416
Cdd:TIGR01786 307 NATSASDYPGVDKNGRYKDKYDYYTLGFDTNN-KIEFSVHSLSLTYGLDRFKDKVSTGD-----SRRNLPTAAY---NLY 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  417 VKDANGNTVQGRNQYtitpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNAPEKRkaTYHEFLPNFSASYKV 496
Cdd:TIGR01786 378 GYEGENRPVKGSNFG-------LFLQDNIKLGDWLSLSAGLRYDHYKTDPKADESKDYGAISK--TYSRWSPSLGLTYKP 448

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  497 NQENQVFYNLTRNMRTPPNYVLYNVGD-----------SLSTKPELSWNHELGWRFQQEDMLLSATLFYMRYSD----RQ 561
Cdd:TIGR01786 449 TPWLTLYYSYSQGFRAPSFDELYGTGAhpgggpytflpNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDfidlGI 528

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  562 ISTTNAA-------GDYEMMNIGNVENKGLELEWS------GQLPHNFNYYTSYTYTQSKQKSdivSNGGLPLPTSGKEV 628
Cdd:TIGR01786 529 GVTAKGNmaqvgsnTITNYVNIDNARIRGIELSGRydlgsfFSGPDGWTTTLKYGYTKGKDSD---TNPWLNAITPLKVV 605

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  629 PNVPKNLLNMTLGYDDGL-YYGSVSGKYVSAFYGDLTNDEKIG-----GRTVFDLAAGVhlpvdkKIVKSAALRFGISNL 702
Cdd:TIGR01786 606 LGLGYDHPDEKWGVGLTLtFSGAKDAVDAYATYYENGEAAKAGplrtpSYTVVDLYGYY------KPNKNLTLRFGVYNL 679

                         730       740       750       760
                  ....*....|....*....|....*....|....*....|....*
gi 727177992  703 FDKEYLTSvrtttfnAAPYGGVKASTPYYNVGeeRTFSVSLEATF 747
Cdd:TIGR01786 680 LDRKYTTW-------ESARQAGPLATGYTAPG--RNYKASVEYKF 715
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 48-747 3.03e-21

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 98.62  E-value: 3.03e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   48 DDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASglSGVDYTMRGMNSDQIGLSMDGIPINDSGNYAVYPNL 127
Cdd:TIGR01785  16 SEAPASVSVISGEQIESKQ-ANNLADALNTVPGVDVTGGGRP--PGQSINIRGLQDNRVLVVVDGARQNYQRGGAHNGSL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  128 LGDAENLEEVFVTQGSSEADGPHiGSSGGNIGLVTR------RPAKDFGGFVKQTLGSNSLSKT-----FARLDtgeyNG 196
Cdd:TIGR01785  93 FVDPELLKRIEIVKGPSSSLYGS-GALGGVVAFRTKdaadllRPGQLFGGLAKLSYGSNNNSFGgsvavAGRLD----DN 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  197 FSNWLSYSHTEAKKWRgegrlysdkfemnslyedgNGNSSNLvmkyNRQNNTNYNTLSKAQFQNDgrDTDYATTPEYNSR 276
Cdd:TIGR01785 168 LDALVAATYRDGGNYR-------------------NGNKEEA----TNSAYVQKNLLAKLGWQLD--DAQRLEFSYFTTE 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  277 GQLNKYYKleRNPFENFTLSFTQKLQLRD--NLSLTLQpyYYWGNGGSFNGQTASVLSSTSDRAGQYNlsnlKSNTYYRP 354
Cdd:TIGR01785 223 GSLDEAQN--SGPGTEYVLGSSSTLLASStrDRSATLT--YNWTPEDNPWLDATASLYYNRTENDNDR----SARGVGRE 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  355 SWTQtwrpgiTTKLKWDINDQHSLDIGYWYErarqlqtqpfISIKGDGNPSQIwgPPGGSDQ--VKDANGNTVQGRnQYT 432
Cdd:TIGR01785 295 EGYQ------YTTYGATLQNTSRFDVASWST----------LTYGVDWMKDKR--RTESFDPnsVTTIVPNPPSAK-EYF 355

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  433 ITpaqkVWLQD--TWFATPdWTFVGGLAYQYVERKGDNrGSLYNAPEKrkaTYHEFLPNFSASYKVNQENQVFYNLTRNM 510
Cdd:TIGR01785 356 FG----LFLQDniPLLDDR-LTLSAGLRYDHYKLSPKT-TADTEAVDR---SYSRWSPSLGLSYKPVDWLTLYASYSQGF 426

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  511 RTPPNYVLYNVGD------------SLSTKPELSWNHELGWRFQQEDMLLS-------ATLFYMRYSD--------RQIS 563
Cdd:TIGR01785 427 RAPSIDELYGTGDhpgtpggytfapNPNLKPETSKTWELGANLSFDNLLLDndqlqfkVAYFYNDVKDfidltigvTDNV 506

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  564 TTNAAGDYEMMNIGNVENKGLELEWSGQLpHNFNYYTSYTYTQSKQKSdivsngglplptSGKEVPNVPKNLLNMTLGY- 642
Cdd:TIGR01785 507 TAGMNNITQYVNIDGARIRGIEASASYDA-GLWATGLSYGYTIGKDQN------------TNQWLSNIPPLKLVVTVGYr 573

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  643 --DDGLYYG----SVSGKYVSAFYGDL--TNDEKIGGRTVFDLAAGVHlPVDkkiVKSAALRFGISNLFDKEYLtsvrtt 714
Cdd:TIGR01785 574 fpDRRLDLGakaaYYERQSESPTTEDVaaNGLLTTPGYTVVDLYATYQ-PNA---VKGLTVRFGVNNLTDRKYT------ 643

                         730       740       750
                  ....*....|....*....|....*....|...
gi 727177992  715 tfnaaPYGGVKASTPyynvgeERTFSVSLEATF 747
Cdd:TIGR01785 644 -----PAQSVPGAGP------GRNFKGSVKYQF 665
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
47-324 2.06e-18

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 86.08  E-value: 2.06e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  47 QDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGlSGVDYTMRGMNSDQIGLSMDGIPINDSGNYAVYPN 126
Cdd:COG4206   12 KSDLTGSVTVIDAEELERSG-ATSLADALRRVPGVQVSSSGGPG-SAASISIRGLGSNQTLVLIDGVPLNDPSLGGVDLS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 127 LLgDAENLEEVFVTQGSSEAD-GPhiGSSGGNIGLVTRRPAKDFGGFVKQTLGSNSLSKTFARL-DTGEYNGFSNWLSYS 204
Cdd:COG4206   90 LI-PPDDIERIEVLKGAASALyGS--DAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLsGGAGKFSYSLSASYR 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 205 HTEAKKWRGEGRLYSDKFEMNSLYedgngnssnlvMKYNRQNNTNYNTLSKAQFQNDGRDTDYATTPEYNSRGQLNKYYK 284
Cdd:COG4206  167 RSDGYRYNDPDLRNNDGYENTSLN-----------ARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYK 235

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 727177992 285 LERNPFENFTLSFTQKLQLRDNLSLTLQPYYYWGNGGSFN 324
Cdd:COG4206  236 LSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
TonB-Xanth-Caul TIGR01782
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
 32-747 8.35e-14

TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]


Pssm-ID: 273804 [Multi-domain]  Cd Length: 845  Bit Score: 75.45  E-value: 8.35e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   32 TISVKGQ--SLGGGMMVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGlSGVdyTMRGMNSDQIGLS 109
Cdd:TIGR01782   3 AVQVTGQraSLEKAIDAKRDADSVVDVISAEDIGKLP-DVNVAEALQRVPGVSIERDQGEG-RYV--SVRGLGPSYNRTT 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  110 MDG--IPINDSGNYAVYPNLLgDAENLEEVFVtQGSSEADGPHiGSSGGNIGLVTRRP--AKDFGGFVKQTLGSNSLSK- 184
Cdd:TIGR01782  79 LNGrtIASTDSGGRAFSLDLL-PSELVSGVEV-YKTPTADMDE-GGIGGTVDLRTRSPfdYDGRTLSGSAQGGYNDLAGk 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  185 ---------TFARLDTGEYNGFSnwLSYSHTE-----------------AKKWRGEGRLYSDKFEMNSLYEDGNGNSSNL 238
Cdd:TIGR01782 156 dkpgprgaaSYSWTFGDGQFGVL--LSASYQKrdfaednvetenwgtytSADGGAQGLYFPRGVRYRSYRNDRERKGVNG 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  239 VMKYNRQNNTNY------------NTLSKAQFQNDGRDTDYATTPEYNSRGQL------NKYYKLERNPFENfTLSFTQk 300
Cdd:TIGR01782 234 SLQWRPSDALELyldtlyskydddETRQQIEFRTLNGGSTVITSNQTATSGALvqgtvaNLQILVEARYNEE-KETTTS- 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  301 LQL-----RDNLSLTLQPYYYWGN----------------GGSFNGQTASVLSSTSDRAGQ--YNLSNLKSNTYYRPSWT 357
Cdd:TIGR01782 312 LTLggewtGDRWTLDGDLGYSKATrdrpdrvtrfftaptpGYDFDYRGGPTLTLGTPADGDdaSNYTNPANGELRRTQIS 391

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  358 QTWRPGITTKLKWDIN---DQHSLDIGYWYERARQLQTQP--FISIKGDGNPSQIWGPPGG------------------- 413
Cdd:TIGR01782 392 YQKAEDSEDAAQLDATfdgPFTSLKFGVRYRRRDKTNRGSryRRSIIGATGASGLAGVPSDlagagldgglggpltgwdp 471

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  414 --SDQVKDANGNTVQGRNQYTITPAQK-----------VWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNA----- 475
Cdd:TIGR01782 472 adLDAFLNAARGDAAGGGTYTYASTAPntytvtedttaAYAMANFDTGLRLRGNVGVRYERTDQTSDGWQSQPAAngtgs 551

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  476 ---PEKRKATYHEFLPNFSASYKVNQENQVFYNLTRNMrTPPNYVLYNVGDSLST----------------KPELSWNHE 536
Cdd:TIGR01782 552 vlvPVSADRDYTDVLPSLNLAYDLTDDLVLRFAASKTI-TRPDFGDLAANTSLSDdgtggtvtvsggnpdlKPYESDNLD 630

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  537 LG--WRFQQEDMlLSATLFYMRYSD---RQISTTNAAGDYEMMNIG-----------NVENKGLELEWS---GQLPH--- 594
Cdd:TIGR01782 631 LSleWYFGPGGL-LSAAVFYKDIKNfivTTTSTETNDGGGGLVVAGvlvsrpvnggkAGKIRGVELGYQqtfDFLPGpls 709

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  595 NFNYYTSYTYTQSkqKSDIVSNGGLPLPTSgkeVPNVPKNLLNMTLGYDDGLYYGSVS----GKYVSAFYGDLTNDEKI- 669
Cdd:TIGR01782 710 GFGVQANYTYVDS--EADPSVDGVQRRKLP---LPGLSKNTANATLYYEKGGFSARLSynyrSDYLLDVGGSNINRLDRy 784

                         810       820       830       840       850       860       870
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 727177992  670 -GGRTVFDLAAGVHLPvdkkivKSAALRFGISNLFDKeylTSVRTTTFNAAPYGGVKAstpyynvgeERTFSVSLEATF 747
Cdd:TIGR01782 785 vDPRGQLDLSASYQVS------DHLSLGLQASNLTNE---PSRWYTGGKQRPREYVET---------GRTYMLGLRYKF 845
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
 11-727 6.23e-13

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 72.48  E-value: 6.23e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  11 LAVMSAMLPGAALA------ADGTDVGTISVKG-------QSLGggmmvqddsakaRSTVTKEAMDKMPSAANAIDKLKF 77
Cdd:PRK13528   9 LWLLTVLLVGLNSPvsaaesSDDDNGETMVVEAtaeqelkQQPG------------VSIITAEDIKKRPPVNDLSDIIRK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  78 TPGLNVNSNDASGLSG----VDytMRGMNSDQIGLSMDGIPInDSGNYAVYP-----NLLGD-----AENLEEVFVTQGS 143
Cdd:PRK13528  77 MPGVNLTGNSASGTRGnnrqID--IRGMGPENTLILIDGVPV-TSRNSVRYSwrgerDTRGDtnwvpPEMVERIEVIRGP 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 144 SEAD-GPhiGSSGGNIGLVTRRPAKDFGG----FVKQTLGSN---------SLSKTFARlDTGEYNGFSNwlsYSHTEAK 209
Cdd:PRK13528 154 AAARyGS--GAAGGVVNIITKRPTNDWHGslslYTNQPESSKegatrranfSLSGPLAG-DALTMRLYGN---LNKTDAD 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 210 KW---RGEGRLYSDKFE------MNSL--YEDGNGNSSNLVMKYNRQNNTnyntlskaqFQNDGRDTDYATTPE--YNSR 276
Cdd:PRK13528 228 SWdinSSAGTKNAAGREgvrnkdINGVlsWKMTPQQILDFEAGYSRQGNI---------YAGDTQNSNSSAVTEslAKSG 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 277 GQLNKYYklernpfenftlsftqklqlRDNLSLTLQPYYYWGnggsfngQTASVLS--STSDRAGQYNLS-----NLKSN 349
Cdd:PRK13528 299 KETNRLY--------------------RQNYGLTHNGIWDWG-------QSRLGFYyeKTNNTRMNEGLAgggegRITAD 351

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 350 TYYRPSWTQTWRPGITTKLKWDINDQHSLDIGYWYERArQLQtQPFiSIKGDGNPSQIWGPPGGSDQVKDANGNTVQGrn 429
Cdd:PRK13528 352 QTFTTSRLESYRTSGELNVPLNWLFEQTLTVGAEWNRD-ELN-DPS-STSLTVKDGDIGGISGSAADRSSKNKSEISA-- 426

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 430 qytitpaqkVWLQDTWFATPDWTFVGGLAYQYVERKGDNrgslynapekrkatyheFLPNFSASYKVNQENQVFYNLTRN 509
Cdd:PRK13528 427 ---------LYVEDNIEPVPGTNLIPGLRFDYHSEFGSN-----------------WSPSLNLSQELGDYFKVKAGIARA 480

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 510 MRTP------PNYVLYNVG-----------------DSLStkPELSWNHELGWRFQQEDMLLSATLFYMRYSDRQISTTN 566
Cdd:PRK13528 481 FKAPnlyqssEGYLLYSRGngcpkditsggcylvgnKNLD--PEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDD 558

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 567 AAGDYEM-MNIGNVEN--KGLELEWSGQL-----PHNFNYYTSYTY-TQSKQKSDivsngGLPLPTsgkevpnVPKNLLN 637
Cdd:PRK13528 559 VIGRTASgAYILQWQNggKAVVEGLEGNLlvplmKDRLNWNTNATYmITSEQKDT-----GNPLSV-------IPKYTIN 626

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 638 MTLG--YDDGL-------YYGSVSGKYVSAFYGDLTNDE---KIGGRTVFDLAAGVhlpvdkKIVKSAALRFGISNLFDK 705
Cdd:PRK13528 627 STLDwqITQALsanvnwtLYGKQKPRTHAESRSEETGGLsgkELGAYSLVGVNVNY------DINKNLRLNVGVSNLFDK 700

                        810       820
                 ....*....|....*....|....*.
gi 727177992 706 E-YLTSVRTTTFNA---APYGGVKAS 727
Cdd:PRK13528 701 QiYREGEGANTYNEpgrAYYAGVTAS 726
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
 47-156 9.15e-13

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 64.98  E-value: 9.15e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   47 QDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPGLNVNSNDASGLSGVdyTMRGMNSDQIGLSMDGIPINDSGNYAVYPN 126
Cdd:pfam07715   2 LRDTPGSVSVVTAEDIEDQG-ATNLADALRGVPGVSVSSGGGGGGSSI--SIRGFGSNRVLVLVDGVPLNSGGGGSVDLN 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 727177992  127 LLgDAENLEEVFVTQGSSEAD-GPhiGSSGG 156
Cdd:pfam07715  79 SI-DPEDIERVEVLKGPASALyGS--GAIGG 106
PRK14050 PRK14050
TonB-dependent siderophore receptor;
6-710 1.74e-12

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 70.99  E-value: 1.74e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   6 RSGIYLAVMSAMLPGAALAADGTDVGTISVKGQ---SLGGGMMVQDDSAKARSTVTKEAM--DKMP-------------- 66
Cdd:PRK14050  15 AAGVALAALVLSGLVAAQEGNTTQLETIVVEGGnaaSATATGPVDGYVAKATATGSKTDTpiTEIPqsvsvvgrqemddr 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  67 SAANAIDK-LKFTPGLNVNSNDASGLSGVDYtMRGMNSDQIGLSMDGIPINDSGnyavYPNLLGDAENLEEVFVTQGSSE 145
Cdd:PRK14050  95 GVTNKVDEaLRYTPGVLSQPFGTDGDTDWFY-IRGFDATQTGVFLDGLNLFSYG----FGGFQIDPFMLERVEVLKGPAS 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 146 AdgPHIGSS-GGNIGLVTRRPAKDfgGFVKQTLGSNSLSKTFARLDTGEYNGFSNWLSYSHTeaKKWRGeGRLYSD---- 220
Cdd:PRK14050 170 V--LYGGSNpGGIVNMVSKRPLDE--PLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVT--GKVAG-GDNYSDysed 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 221 --KFEMNSL-YEDGNGNSSNLVMKYNRQNNTN--------YNTLSKAQFQNDGRDTDYaTTP--EYNSRGQLNKYYKLER 287
Cdd:PRK14050 243 lrGFIMPQItYAPDDATSLTVYGYLSGLDQVHvgngflpyVGTVVDAPFGKIDRDAFY-GEPdiDNGSYAQQMLGYEFSH 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 288 NpFENfTLSFTQKLQLRDNLSLTLQPYYYWGNGGSFNGQTASVLSSTSDRAGQYNLSnlKSNTYyrpswtqtwrpGITTK 367
Cdd:PRK14050 322 E-FDN-GWTFSQNARYGHLHKHEKGPYTYGYVGGATGLPDPTGPDYMLNRIGFEHRS--KVDSF-----------SIDNR 386

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 368 LKWDIND---QHSLDIG--YWYERARQLQTQPFISIKGDGNPsqIWGPPGGSDQVKdanGNTVQGRNQYTITPAQKVWLQ 442
Cdd:PRK14050 387 LEGEFDTgalTHNLLFGldYKYYRLDQVQACCGATPISATNP--VYGTTQGANFVY---LDQILTQQQIGIYAQDQIRFG 461

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 443 DTWFATpdwtFVGglAYQYVERKGDNR-GSLY----NAPEKRKATYHEF----LPNFSASykvnqenqVFYNLTRNMRTp 513
Cdd:PRK14050 462 DGWLVT----LNG--RYDYVDTDSDARiGTSYesndGALSGRAGLAYEFdnglTPYVSAA--------TFFNPLVGTLA- 526

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 514 pnyvlynvgDSLSTKPELSWNHELGWRFQQE--DMLLSATLFYMrysDRQISTTNAAGDYEMMNIGNVENKGLELEWSGQ 591
Cdd:PRK14050 527 ---------SGPPLKPEEGEQYEAGIKYEPSfiDGLITASVFQI---TKKNVTVTDPLTFASTQLGEVRSRGFELEGKVN 594

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 592 LPHNFNYYTSYTYTQSKQKSDIVSNgglplpTSGKEVPNVPKNLLNMTLGYD--DGLYYGSVSG---KYVSAFYGDLTND 666
Cdd:PRK14050 595 LDDNWKALASFTYTDLEITEDANPS------LIGNSPYLVPETQASLWLDYAvtDGAFEGVSLGagvRYQGESWADEANT 668

                        730       740       750       760
                 ....*....|....*....|....*....|....*....|....
gi 727177992 667 EKIGGRTVFDLAAGVhlpvdKKIVKSAALRfgISNLFDKEYLTS 710
Cdd:PRK14050 669 LKVPAATLFDAAIRY-----EKNDWGASLN--VANLFDKEYVAG 705
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
 1-710 6.73e-10

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 62.47  E-value: 6.73e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   1 MKSFNRSGIYLAVMSAMLPG----AALAADGTDVGTISVKGQSLG-------GGMMVQDDSAKARST------------- 56
Cdd:PRK10044   6 TAQPNHSLRKIAVVVATAVSgmsvYAQAAVEPKEETITVTAAPAPqesawgpAATIAAKRSATGTKTdtpiektpqsisv 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  57 VTKEAMDkMPSAANAIDKLKFTPGLNVNSNDASglSGVDY-TMRGMNSDQI-------GLSMDGipiNDSGNYAVYPNLL 128
Cdd:PRK10044  86 VTAEEMA-LHQPKSVKEALSYTPGVSVGTRGAS--NTYDHlIIRGFAASGQsqnnyldGLKLQG---NFYNDAVIDPYML 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 129 GDAENLE-EVFVTQGSSeadgphigSSGGNIGLVTRRPAKDFGGFVKQTLGSNSLSKT---F--ARLDTGEYngfsnwlS 202
Cdd:PRK10044 160 ERAELMRgPVSVLYGKS--------NPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTgfdFsdALDDDGVY-------S 224

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 203 YSHTeakkwrgegrlysdkfemnslyedGNGNSSNLVMKYNRQ--------------NNTNYNTLSkaQFQNDGRDTDYA 268
Cdd:PRK10044 225 YRLT------------------------GLARSANAQQKGSEEqryaiapsftwrpdDKTNFTFLS--YFQNEPETGYYG 278

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 269 TTP----------------EYNSRGQLNKYYKLERNPFENFTLSFTQKLQLRDNLSLTLQPYYY---WGNGgsfngqTAS 329
Cdd:PRK10044 279 WLPkegtveplpngkrlptDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRYAENKTSQrsvYGYG------VCS 352

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 330 VLSSTSDRAgqYNLSNLKSNTYYRPSWTQTwrpgittklKWDIND-QHSLDIGYWYERARQLQTQPFISiKGDGNPSQIW 408
Cdd:PRK10044 353 DKGHYLNRG--YVVDDEKLQNFSVDTQLQS---------KFATGDvDHTLLTGVDFMRMRNDINAWFGY-ADSVPLLNLY 420

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 409 GPPggsdqvkDANGNTVQGRNQYTITPAQK---VWLQDT--WfatPDWTFVGGLAYQYVERKGDNRgsLYNAPEKRKAty 483
Cdd:PRK10044 421 GPV-------NTDFDFNANSGPYQILNKQKqtgLYVQDQaeW---DKWLVTLGGRYDWADQSSLNR--VNGTTDKRDD-- 486

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 484 HEFLPNFSASYkvnqenqvfynLTRNMRTPpnYVLY------NVGDSLSTK---PELSWNHELGWRFQQEDMLLSATLFY 554
Cdd:PRK10044 487 KQFTWRGGVNY-----------LFDNGITP--YFSYsesfepSSGTGKDGNifaPSKGKQYEAGVKYVPKDRPIVVTGAV 553

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 555 MRYSDRQISTTNAAGDYEMMNIGNVENKGLELEWSGQLPHNFNYYTSYTYTQSKQKSDIVSNGGLPLptsgkevpNVPKN 634
Cdd:PRK10044 554 YQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPA--------QVPKH 625

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 635 LLNMTLGYD------DGLYYGSvSGKYVSAFYGDLTNDEKIGGRTVFDLAagvhlpvdkkiVKSAALRFG---------I 699
Cdd:PRK10044 626 MASLWADYTffdgplSGLTLGT-GGRYTGSSYGDPANSFKVGSYTVVDAL-----------VKYDLARFGmagssvalnV 693

                        810
                 ....*....|.
gi 727177992 700 SNLFDKEYLTS 710
Cdd:PRK10044 694 NNLFDREYVAS 704
PRK13524 PRK13524
FepA family TonB-dependent siderophore receptor;
411-747 7.40e-09

FepA family TonB-dependent siderophore receptor;


Pssm-ID: 237410 [Multi-domain]  Cd Length: 744  Bit Score: 59.27  E-value: 7.40e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 411 PGGSDQVKDANGN----TVQGRNQYTITPAQKVWLQDTWFATPDWTFVGGLAYQYVERKGDNRGSLYNapekrkaTYHEF 486
Cdd:PRK13524 403 PSSNTQALTSGGAipgvSATGRSPYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNWSPSLN-------LSQGL 475

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 487 LPNFSA------SYKVNqenqvfyNLtrnMRTPPNYVLYNVG----------------DSLstKPELSWNHELGWRFQQE 544
Cdd:PRK13524 476 GDDFTLkmgiarAYKAP-------NL---YQTNPNYILYSKGqgcyasagngcylqgnDDL--KAETSVNKEIGLEFKRD 543

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 545 DMLLSATLFYMRYSDRQISTTNAAGD--------YEMMNIGNVENKGLE----LEWSGQLphnfNYYTSYTYT-QSKQKs 611
Cdd:PRK13524 544 GWLAGLTWFRNDYRNKIEAGYVPVGTnsvgktdiYQWENVPKAVVEGLEgtlnVPVSETV----NWTNNLTYMlQSKNK- 618

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 612 divsngglplpTSGKEVPNVPKNLLNMTLGYD---------DGLYYGSVSGKYVSAFYGDLTNDEK--IGGRTVFDLAAG 680
Cdd:PRK13524 619 -----------TTGDPLSIIPEYTLNSTLSWQatedlslqsTFTWYGKQKPKKYNYKGQPVTGSATkeVSPYSIVGLSAT 687

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 727177992 681 VhlpvdkKIVKSAALRFGISNLFDKEYLTSVRTTTFNAAPYGGvKASTpyYNvgeE--RTFSVSLEATF 747
Cdd:PRK13524 688 Y------DVTKNVSLTGGVDNLFDKRLWREGNAQTTGDLIAGA-GAYT--YN---EpgRTYYMSLNTHF 744
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
 528-705 1.60e-08

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 57.99  E-value: 1.60e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 528 KPELSWNHELGWRFQ--QEDMLLSATLFYMRYSDRQI--STTNAAGDYEM-MNIGNVENKGLELEWSGQLPHNFNYYTSY 602
Cdd:PRK14049 519 KPTESEQQEVGVKYLlpNSNTLITAALFNIDQTNGLYyeVVFLAAGPTNIqVQRGKLRSRGFELEANTSLDNGLSLIASY 598

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 603 TYTQSKQKSDivsngglPLPTSGKEVPNVPKNLLNMTLGY---DDGLYYGSVSG---KYVSAFYGDLTNDEKIGGRTVFD 676
Cdd:PRK14049 599 TYTDVKIIQG-------PEGTIGNEVSSVPNHMASAWAHYtlpEGGPLYGLGLGagaRFVGSSYGNDQNTFKNSSRVLFD 671

                        170       180
                 ....*....|....*....|....*....
gi 727177992 677 LAAGVHLPVDKKIVKSAALRFGISNLFDK 705
Cdd:PRK14049 672 ASVGYDFAAIDKKYEGLMLQVNATNLFDR 700
PRK13513 PRK13513
ligand-gated channel protein;
528-643 2.33e-07

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 54.39  E-value: 2.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 528 KPELSWNHELG--WRfQQEDMLLSATLFYMRYSD-----RQISTTNAAGD-----------YEMMNIGNVENKGLELEWS 589
Cdd:PRK13513 452 KPEKSISQEIGilWD-NQENLNASVTLFNTDFKDkitevRNCDTTNTDGQcvfnginydfiSDRINVDKANMRGVEATFN 530

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 727177992 590 GQLPHNFNYYTSYTYTQSKQKSdivsnGGLplptSGKEVPNVPKNLLNMTLGYD 643
Cdd:PRK13513 531 WDINQAWSLATNYTFTQSEQKS-----GAF----AGQPLNQMPKHMANATLNWQ 575
PRK13483 PRK13483
ligand-gated channel protein;
528-706 7.46e-07

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 52.47  E-value: 7.46e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 528 KPELSWNHELGWRFQQEDML-LSATLFYMRYSDRQI-----STTNAAGDYEM-------MNIGNVENKGLELEWSGQLPH 594
Cdd:PRK13483 456 KPETSLNKELGLYYDLGSGLtASLTVFYNEFKDKITrvacpATQCTDGPNQFgadpttyVNIDEAVTQGVEASLSYPITS 535

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 595 NFNYYTSYTYTQSKQKSDivSNGGLPLptsgkevPNVPKNLLNMTLGYDDG--------LYY---------GSVSGKYVS 657
Cdd:PRK13483 536 TLSLSGNYTYTDSEQKSG--AYKGSPL-------NQLPKHLFQASLNWEPTdrlnswarVNYrgeesqpttGPSSSSFIA 606

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 727177992 658 AFYgdltndekiggrTVFDLAAgvhlpvDKKIVKSAALRFGISNLFDKE 706
Cdd:PRK13483 607 PSY------------TFLDLGA------NYQLTDNLKLSAGIYNLFDKE 637
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
1-705 5.13e-06

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 50.01  E-value: 5.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992   1 MKSFNRSGIYLAVMSAMLPGAALAADGTDVGTISVkgqSLGGGMMVQDDSAKARSTVTKEAMDKMPsAANAIDKLKFTPG 80
Cdd:PRK13484   1 MKNKYIIAPGIAVMCSAVISSGYASSDKKEDTLVV---TASGFTQQLRNAPASVSVITSEQLQKKP-VSDLVDAVKDVEG 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  81 LNVNSNDASGlsgvDYTMRGMNSDQIGLSMDGI--------PiNDSGNYAVypNLLGDAENLEEVFVTQGSSEAdgpHIG 152
Cdd:PRK13484  77 ISITGGNEKP----DISIRGLSGDYTLILVDGRrqsgresrP-NGSGGFEA--GFIPPVEAIERIEVIRGPMSS---LYG 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 153 SS--GGNIGLVTRRPAKDFGGFVKQTLGSNSLSKTFARLDTGEYngfsnWLSyshteakkwrgeGRLYSDKFEMNsLYed 230
Cdd:PRK13484 147 SDaiGGVINIITKPVNNQTWDGVLGLGGIIQEHGKFGNSTTNDF-----YLS------------GPLIKDKLGLQ-LY-- 206

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 231 gngNSSNLVMKynrqnntnyNTLSKAQFQNDGRdtdyattpeynsrgqlNKYYKLERNPFENFTLSFTQKlqlRDNLSLT 310
Cdd:PRK13484 207 ---GGMNYRKE---------DSISQGTPAKDNK----------------NITATLQFTPTESQKFVFEYG---KNNQVHT 255

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 311 LQPyyywgnggsfnGQTasvLSSTSDRAGQYNLSNLKSNTYYRPSWTQTWR-------PGITTKLKWDINDQHSLDI--- 380
Cdd:PRK13484 256 LTP-----------GES---LDAWTMRGNLKQPNSKRETHNSRSHWVAAWNaqgeilhPEIAVYQEKVIREVKSGKKdky 321

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 381 ---GYWYERARQLQTQPFISIKGDGNPSQIWGPPGGSDQ---VKDANGNTVQGRNQYTITPAQK-VWLQDTWFATPDWTF 453
Cdd:PRK13484 322 nhwDLNYESRKPEITNTIIDAKVTAFLPENVLTIGGQFQhaeLRDDSATGKKTTETQSVSIKQKaVFIENEYAATDSLAL 401

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 454 VGGLayqyverKGDNR---GSLYNapekrkatyheflPNFSASYKVNQENQVFYNLTRNMRTP------PNY-------- 516
Cdd:PRK13484 402 TGGL-------RLDNHeiyGSYWN-------------PRLYAVYNLTDNLTLKGGIAKAFRAPsirevsPGFgtltqgga 461

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 517 -VLYNVGDslsTKPELSWNHELGWRFQQED-MLLSATLFYMRYSDRQISTTNAAGD-------YEMMNIGNVENKGLELE 587
Cdd:PRK13484 462 sIMYGNRD---LKPETSVTEEIGIIYSNDSgFSASATLFNTDFKNKLTSYDIGTKDpvtglntFIYDNVGEANIRGVELA 538

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 588 WSGQLPHNFNYYTSYTYTQSKQKSDIVSNGGLPLptSGKEVPNVPKNLLNMTLGYD---DGLYYGSV--SGKYV-SAFYG 661
Cdd:PRK13484 539 TQIPVYDKWHVSANYTFTDSRRKSDDESLNGKSL--KGEPLERTPRHAANAKLEWDytqDITFYSSLnyTGKQIwAAQRN 616

                        730       740       750       760
                 ....*....|....*....|....*....|....*....|....
gi 727177992 662 DLTNDEKIGGRTVFDLAagvhlpVDKKIVKSAALRFGISNLFDK 705
Cdd:PRK13484 617 GAKVPRVRNGFTSMDIG------LNYQILPDTLINFAVLNVTDR 654
OMP_b-brl_3 pfam14905
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...
 451-612 5.73e-06

Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.


Pssm-ID: 434300 [Multi-domain]  Cd Length: 407  Bit Score: 49.19  E-value: 5.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  451 WTFVGGLAYQYVERKGDNRgslyNAPEKRKATYHEFLPNFSASYKVNQENQV---FYNLTRNMRtpPNYVLYN----VGD 523
Cdd:pfam14905 128 WSYQAGLRAEYTDIDGDSV----TTNETFKRNYFNLFPSASLSYKLNDNNSLqlsLYYRRIINR--PSYWDLNpfrnYSD 201

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992  524 SLST-------KPELSWNHELGWRFQQEdmlLSATLFYmRYSDRQISTTNAAGD------YEMMNIGNVENKGLELEWSG 590
Cdd:pfam14905 202 PYNYsqgnpnlKPEYTNSFELGYTYKWK---LSLSLSY-RYTNDVIQQTFITDDndnvtyTTYENLGKSNSYGLELSASF 277

                         170       180
                  ....*....|....*....|..
gi 727177992  591 QLPHNFNYYTSYTYTQSKQKSD 612
Cdd:pfam14905 278 NPTKWWSLNGNLNGYYNKYKID 299
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
 528-706 5.82e-05

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 46.42  E-value: 5.82e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 528 KPELSWNHELGWRFQQEDMLL-----SATLFYMRYSDR-QISTT---NAAGDYE------------------MMNIGNVE 580
Cdd:PRK10064 448 KPETSESWELGLYYMGEEGWLegvesSVTVFRNDVDDRiSISRTsdvNAAPGYQnfvgfetngrgrrvpvfrYYNVNKAR 527

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 581 NKGLELEWSGQLPHNFNYYTSYTYTQSKQksdiVSNGGlplptsGKEVPNVPKNLLNMTLGY-----DDGLYYgsVSGKY 655
Cdd:PRK10064 528 IQGVETELKIPFNDEWKLSLNYTYNDGRD----VSNGE------NKPLSDLPFHTANGTLDWkplalEDWSFY--VSGNY 595

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 727177992 656 VSAfYGDLTNDEKI-GGRTVFDLAAGVhlpvdkKIVKSAALRFGISNLFDKE 706
Cdd:PRK10064 596 TGQ-KRADSATAKTpGGYTIWNTGAAW------QVTKDVKLRAGVLNLGDKD 640
PRK13486 PRK13486
TonB-dependent receptor;
528-747 6.77e-04

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 43.09  E-value: 6.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 528 KPELSWNHELGWRFQQEDML-LSATLFYMRYSDRQISTTNAAGDYEMMNIGNVENKGLEleWSGQLP---HNFNYYTSYT 603
Cdd:PRK13486 471 KPEESVSYEAGVYYDNPAGLnANVTGFMTDFSNKIVSYSINDNTNSYVNSGKARLHGVE--FAGTLPlwsEDVTLSLNYT 548

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 727177992 604 YTQSKQKSDivSNGGLPLPTSGKEVPNVPKNL-----LNMTLG--YDDGLYYGSVSGKYVSAFYGDLTND--EKIGGRTV 674
Cdd:PRK13486 549 WTRSEQRDG--DNKGAPLSYTPEHMVNAKLNWqiteeVASWLGarYRGKTPRFTQNYSSLSAVQKKVYDEkgEYLKAWTV 626

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 727177992 675 FDLAagvhlpVDKKIVKSAALRFGISNLFDKEY----LTSVRTTTFNAAPYGGVKASTPYYnVGEERTFSVSLEATF 747
Cdd:PRK13486 627 VDAG------LSWKMTDALTLNAAVNNLLNKDYsdvsLYSAGKSTLYAGDYFQTGSSTTGY-VIPERNYWMSLNYQF 696
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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