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Conserved domains on  [gi|700662621|ref|WP_033180152|]
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MULTISPECIES: DUF2076 domain-containing protein [Rhizobium]

Protein Classification

DUF2076 domain-containing protein( domain architecture ID 10007341)

DUF2076 domain-containing protein similar to Buchnera aphidicola protein BU181 (also known as Yba2)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG3416 COG3416
Uncharacterized conserved protein, DUF2076 domain [Function unknown];
1-238 7.12e-67

Uncharacterized conserved protein, DUF2076 domain [Function unknown];


:

Pssm-ID: 442642 [Multi-domain]  Cd Length: 237  Bit Score: 207.18  E-value: 7.12e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621   1 MSPEERQLLTALFDRVRTAAATPRDRDAEALIDQATREQPSATYYLAQAVIVQEKGLEAAANHIKELEERVRQLEAGese 80
Cdd:COG3416    1 MTPEERQLIDGLFDRLKQAEGQPRDPEAEALIAEALRQQPAAPYYMAQTILVQEAALKQAQQRIQELEAQLAQLQQQ--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621  81 hrQAEQGGGFLSSIFGNTQTQQPAPVPSNPGPSN-----PGPWGQQSrgyddsrgydrdvRQPPQQPTGPWTQQAAAPSA 155
Cdd:COG3416   78 --QPQSSGGFLSGLFGGGQRPPPAPQPSQPGPQQqpappSGPWGQAA-------------PQQPGYGQPQYGQPAAGPSG 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621 156 GGSFLHGALGTAAGVAGGMLLANSLSGIFGNHMSSLGWGSPFGTNPfgnasAPTEETVINNYYGNDDTRQAADTASDDKD 235
Cdd:COG3416  143 GGGFLGGALQTAAGVAGGVLLANALTGMFSGSHPGEGVGGGGGEPG-----GAGEETVINNYYGDDAGGDNNDAGFQDND 217

                 ...
gi 700662621 236 NDN 238
Cdd:COG3416  218 YDA 220
 
Name Accession Description Interval E-value
COG3416 COG3416
Uncharacterized conserved protein, DUF2076 domain [Function unknown];
1-238 7.12e-67

Uncharacterized conserved protein, DUF2076 domain [Function unknown];


Pssm-ID: 442642 [Multi-domain]  Cd Length: 237  Bit Score: 207.18  E-value: 7.12e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621   1 MSPEERQLLTALFDRVRTAAATPRDRDAEALIDQATREQPSATYYLAQAVIVQEKGLEAAANHIKELEERVRQLEAGese 80
Cdd:COG3416    1 MTPEERQLIDGLFDRLKQAEGQPRDPEAEALIAEALRQQPAAPYYMAQTILVQEAALKQAQQRIQELEAQLAQLQQQ--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621  81 hrQAEQGGGFLSSIFGNTQTQQPAPVPSNPGPSN-----PGPWGQQSrgyddsrgydrdvRQPPQQPTGPWTQQAAAPSA 155
Cdd:COG3416   78 --QPQSSGGFLSGLFGGGQRPPPAPQPSQPGPQQqpappSGPWGQAA-------------PQQPGYGQPQYGQPAAGPSG 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621 156 GGSFLHGALGTAAGVAGGMLLANSLSGIFGNHMSSLGWGSPFGTNPfgnasAPTEETVINNYYGNDDTRQAADTASDDKD 235
Cdd:COG3416  143 GGGFLGGALQTAAGVAGGVLLANALTGMFSGSHPGEGVGGGGGEPG-----GAGEETVINNYYGDDAGGDNNDAGFQDND 217

                 ...
gi 700662621 236 NDN 238
Cdd:COG3416  218 YDA 220
DUF2076 pfam09849
Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various ...
1-238 4.03e-61

Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various hypothetical prokaryotic proteins, has no known function. The domain, however, is found in various periplasmic ligand-binding sensor proteins.


Pssm-ID: 430876  Cd Length: 263  Bit Score: 193.42  E-value: 4.03e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621    1 MSPEERQLLTALFDRVRTAAATPRDRDAEALIDQATREQPSATYYLAQAVIVQEKGLEAAANHIKELEERVRQLEAGESE 80
Cdd:pfam09849   1 MTPQERQLIDGLFDRLRQAENAPRDPEAEALIAQGLRRQPDAPYYLAQTVLVQEQALKAAQARIQELEAQLQQLQQQQQQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621   81 HRQAEQGGGFLSSIFGNTQTQQPAPVPSNPGPSNPGPWGQQSRGYDDSRGYdRDVRQPPQQPTGPWTQQAAAPSAGGSFL 160
Cdd:pfam09849  81 AQAQPSSGGFLGGLFGGGSQSRPPPPPQARPAWPAGQAPGQPQPYPGQPGY-AQQGQPQYGQPAQPPRGPWGPGGGGGFL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621  161 HGALGTAAGVAGGMLLANSLSGIFGNHMSSLGWGSPFGtnpfgnasAPTEETVINNYY--GNDDTRQAADTASDDKDNDN 238
Cdd:pfam09849 160 GGALQTAAGVAGGVLLAQGIESLFSGGHGGFGGGGGSQ--------PAGGETVINNYYssGGSLADDAGDADNGSADDGG 231
 
Name Accession Description Interval E-value
COG3416 COG3416
Uncharacterized conserved protein, DUF2076 domain [Function unknown];
1-238 7.12e-67

Uncharacterized conserved protein, DUF2076 domain [Function unknown];


Pssm-ID: 442642 [Multi-domain]  Cd Length: 237  Bit Score: 207.18  E-value: 7.12e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621   1 MSPEERQLLTALFDRVRTAAATPRDRDAEALIDQATREQPSATYYLAQAVIVQEKGLEAAANHIKELEERVRQLEAGese 80
Cdd:COG3416    1 MTPEERQLIDGLFDRLKQAEGQPRDPEAEALIAEALRQQPAAPYYMAQTILVQEAALKQAQQRIQELEAQLAQLQQQ--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621  81 hrQAEQGGGFLSSIFGNTQTQQPAPVPSNPGPSN-----PGPWGQQSrgyddsrgydrdvRQPPQQPTGPWTQQAAAPSA 155
Cdd:COG3416   78 --QPQSSGGFLSGLFGGGQRPPPAPQPSQPGPQQqpappSGPWGQAA-------------PQQPGYGQPQYGQPAAGPSG 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621 156 GGSFLHGALGTAAGVAGGMLLANSLSGIFGNHMSSLGWGSPFGTNPfgnasAPTEETVINNYYGNDDTRQAADTASDDKD 235
Cdd:COG3416  143 GGGFLGGALQTAAGVAGGVLLANALTGMFSGSHPGEGVGGGGGEPG-----GAGEETVINNYYGDDAGGDNNDAGFQDND 217

                 ...
gi 700662621 236 NDN 238
Cdd:COG3416  218 YDA 220
DUF2076 pfam09849
Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various ...
1-238 4.03e-61

Uncharacterized protein conserved in bacteria (DUF2076); This domain, found in various hypothetical prokaryotic proteins, has no known function. The domain, however, is found in various periplasmic ligand-binding sensor proteins.


Pssm-ID: 430876  Cd Length: 263  Bit Score: 193.42  E-value: 4.03e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621    1 MSPEERQLLTALFDRVRTAAATPRDRDAEALIDQATREQPSATYYLAQAVIVQEKGLEAAANHIKELEERVRQLEAGESE 80
Cdd:pfam09849   1 MTPQERQLIDGLFDRLRQAENAPRDPEAEALIAQGLRRQPDAPYYLAQTVLVQEQALKAAQARIQELEAQLQQLQQQQQQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621   81 HRQAEQGGGFLSSIFGNTQTQQPAPVPSNPGPSNPGPWGQQSRGYDDSRGYdRDVRQPPQQPTGPWTQQAAAPSAGGSFL 160
Cdd:pfam09849  81 AQAQPSSGGFLGGLFGGGSQSRPPPPPQARPAWPAGQAPGQPQPYPGQPGY-AQQGQPQYGQPAQPPRGPWGPGGGGGFL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 700662621  161 HGALGTAAGVAGGMLLANSLSGIFGNHMSSLGWGSPFGtnpfgnasAPTEETVINNYY--GNDDTRQAADTASDDKDNDN 238
Cdd:pfam09849 160 GGALQTAAGVAGGVLLAQGIESLFSGGHGGFGGGGGSQ--------PAGGETVINNYYssGGSLADDAGDADNGSADDGG 231
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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