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Conserved domains on  [gi|697053291|ref|WP_033145897|]
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MULTISPECIES: flagellar filament capping protein FliD [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliD super family cl35636
flagellar capping protein; Reviewed
 1-472 4.25e-168

flagellar capping protein; Reviewed


The actual alignment was detected with superfamily member PRK08032:

Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 481.50  E-value: 4.25e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   1 MATISNLGIGSA-GLGDLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSVSSTNT 79
Cdd:PRK08032   1 MASISSLGVGSGlDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSSSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  80 AFTATTTADASVGSFVVNVNQVAKAQALTTGSYANNTDLLGDTtGTTRKITITQPGTKTPLEVTLADGDTSLAGIASAIN 159
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTTATVSSTKEALGTS-DSTRTITITQPGRKEPLEIDLTAGQTSLSGIRDAIN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 160 KANGNVTASVIKAKDGDYRLMLSSKTTGTDGEMTISVTGDDKLQNAIGYNSTTKTGALTVNTGAQNAIVVVNSISIERQT 239
Cdd:PRK08032 160 KAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNMTQSVAAQNAKLTVNGIAIERQS 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 240 NTITDALPGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYVPVDAGAgSQSASNGALVGDANV 319
Cdd:PRK08032 240 NTITDAPEGITLNLKKVTTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGA-DQSSSNGALLGDSTL 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 320 RGIQSQLRGLLTEVQSGS-VQIMAQLGITQDPvkgsdgTVGNLKVDTDKLKKALTENPNAVQQYFVGDGKKTGMATQMNN 398
Cdd:PRK08032 319 RTIQTQLKSQLANSQSSSdFKTLAQIGITQDP------SDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIAT 392

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697053291 399 TLTTMLStstgSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVTKMTNTANYLTQQFS 472
Cdd:PRK08032 393 NLKSWLS----TTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
 
Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-472 4.25e-168

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 481.50  E-value: 4.25e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   1 MATISNLGIGSA-GLGDLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSVSSTNT 79
Cdd:PRK08032   1 MASISSLGVGSGlDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSSSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  80 AFTATTTADASVGSFVVNVNQVAKAQALTTGSYANNTDLLGDTtGTTRKITITQPGTKTPLEVTLADGDTSLAGIASAIN 159
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTTATVSSTKEALGTS-DSTRTITITQPGRKEPLEIDLTAGQTSLSGIRDAIN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 160 KANGNVTASVIKAKDGDYRLMLSSKTTGTDGEMTISVTGDDKLQNAIGYNSTTKTGALTVNTGAQNAIVVVNSISIERQT 239
Cdd:PRK08032 160 KAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNMTQSVAAQNAKLTVNGIAIERQS 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 240 NTITDALPGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYVPVDAGAgSQSASNGALVGDANV 319
Cdd:PRK08032 240 NTITDAPEGITLNLKKVTTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGA-DQSSSNGALLGDSTL 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 320 RGIQSQLRGLLTEVQSGS-VQIMAQLGITQDPvkgsdgTVGNLKVDTDKLKKALTENPNAVQQYFVGDGKKTGMATQMNN 398
Cdd:PRK08032 319 RTIQTQLKSQLANSQSSSdFKTLAQIGITQDP------SDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIAT 392

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697053291 399 TLTTMLStstgSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVTKMTNTANYLTQQFS 472
Cdd:PRK08032 393 NLKSWLS----TTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-473 5.15e-128

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 378.80  E-value: 5.15e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   1 MATISNLGIGSaGL--GDLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSV-SST 77
Cdd:COG1345    1 MASISSLGLGS-GLdtDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKAtSSN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  78 NTAFTATTTADASVGSFVVNVNQVAKAQALTTGSYANNTDLLGDTTgttrkITITQpGTKTPLEVTLADGDTsLAGIASA 157
Cdd:COG1345   80 ESAVTATATSGAAAGSYSIEVTQLAQAQSLASAAFASATTTLGTGT-----LTITV-GDGKTVTITIDANDT-LADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 158 INKANGNVTASVIKakDGDYRLMLSSKTTGTDGEMTISVTGDDKLQNAIGYNSTTktgALTVNTGAQNAIVVVNSISIER 237
Cdd:COG1345  153 INAAGAGVTASIVN--DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGFDPAS---GMTETQAAQDAKLTVNGITITS 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 238 QTNTITDALPGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYvpvdaGAGSQSASNGALVGDA 317
Cdd:COG1345  228 SSNTFTDAIDGVTLTLKKVTGGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKY-----TKDEETAKAGALLGDS 302

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 318 NVRGIQSQLRGLLTEVQ--SGSVQIMAQLGITQDpvkgSDGTvgnLKVDTDKLKKALTENPNAVQQYFVGDGKKTGMATQ 395
Cdd:COG1345  303 TLRSLQSQLRSALSSPVsgGGSYKSLSDIGITTD----KDGK---LELDETKLDKALAEDPDAVAKLFTGDGKTTGIATR 375

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 697053291 396 MNNtlttMLSTSTGSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVTKMTNTANYLTQQFSQ 473
Cdd:COG1345  376 LDD----LLDSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLAS 449
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 223-462 2.14e-53

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 179.02  E-value: 2.14e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  223 AQNAIVVVNSISIERQTNTITDALPGVTFSLKAESKADE-TLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYvpvda 301
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGEtTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSY----- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  302 GAGSQSASNGALVGDANVRGIQSQLRGLLT-EVQSGSVQIMAQLGITQDPvkgsdgTVGNLKVDTDKLKKALTENPNAVQ 380
Cdd:pfam07195  76 TLDEETKKAGALAGDSTLRSILSQLRSVLSsSVSDGSISSLADIGITTDS------DYGTLELDEEKLDKALKENPDSVA 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  381 QYFVGDGK--KTGMATQMNNtltTMLSTSTGSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVT 458
Cdd:pfam07195 150 ELFTGDGSrvDTGFAKRLTD---LLKSYVGASNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVS 226


                  ....
gi 697053291  459 KMTN 462
Cdd:pfam07195 227 KMNA 230
 
Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-472 4.25e-168

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 481.50  E-value: 4.25e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   1 MATISNLGIGSA-GLGDLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSVSSTNT 79
Cdd:PRK08032   1 MASISSLGVGSGlDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSSSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  80 AFTATTTADASVGSFVVNVNQVAKAQALTTGSYANNTDLLGDTtGTTRKITITQPGTKTPLEVTLADGDTSLAGIASAIN 159
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTTATVSSTKEALGTS-DSTRTITITQPGRKEPLEIDLTAGQTSLSGIRDAIN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 160 KANGNVTASVIKAKDGDYRLMLSSKTTGTDGEMTISVTGDDKLQNAIGYNSTTKTGALTVNTGAQNAIVVVNSISIERQT 239
Cdd:PRK08032 160 KAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNMTQSVAAQNAKLTVNGIAIERQS 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 240 NTITDALPGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYVPVDAGAgSQSASNGALVGDANV 319
Cdd:PRK08032 240 NTITDAPEGITLNLKKVTTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGA-DQSSSNGALLGDSTL 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 320 RGIQSQLRGLLTEVQSGS-VQIMAQLGITQDPvkgsdgTVGNLKVDTDKLKKALTENPNAVQQYFVGDGKKTGMATQMNN 398
Cdd:PRK08032 319 RTIQTQLKSQLANSQSSSdFKTLAQIGITQDP------SDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIAT 392

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697053291 399 TLTTMLStstgSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVTKMTNTANYLTQQFS 472
Cdd:PRK08032 393 NLKSWLS----TTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-473 5.15e-128

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 378.80  E-value: 5.15e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   1 MATISNLGIGSaGL--GDLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSV-SST 77
Cdd:COG1345    1 MASISSLGLGS-GLdtDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKAtSSN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  78 NTAFTATTTADASVGSFVVNVNQVAKAQALTTGSYANNTDLLGDTTgttrkITITQpGTKTPLEVTLADGDTsLAGIASA 157
Cdd:COG1345   80 ESAVTATATSGAAAGSYSIEVTQLAQAQSLASAAFASATTTLGTGT-----LTITV-GDGKTVTITIDANDT-LADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 158 INKANGNVTASVIKakDGDYRLMLSSKTTGTDGEMTISVTGDDKLQNAIGYNSTTktgALTVNTGAQNAIVVVNSISIER 237
Cdd:COG1345  153 INAAGAGVTASIVN--DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGFDPAS---GMTETQAAQDAKLTVNGITITS 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 238 QTNTITDALPGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYvpvdaGAGSQSASNGALVGDA 317
Cdd:COG1345  228 SSNTFTDAIDGVTLTLKKVTGGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKY-----TKDEETAKAGALLGDS 302

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 318 NVRGIQSQLRGLLTEVQ--SGSVQIMAQLGITQDpvkgSDGTvgnLKVDTDKLKKALTENPNAVQQYFVGDGKKTGMATQ 395
Cdd:COG1345  303 TLRSLQSQLRSALSSPVsgGGSYKSLSDIGITTD----KDGK---LELDETKLDKALAEDPDAVAKLFTGDGKTTGIATR 375

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 697053291 396 MNNtlttMLSTSTGSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVTKMTNTANYLTQQFSQ 473
Cdd:COG1345  376 LDD----LLDSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLAS 449
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 223-462 2.14e-53

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 179.02  E-value: 2.14e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  223 AQNAIVVVNSISIERQTNTITDALPGVTFSLKAESKADE-TLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYvpvda 301
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGEtTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSY----- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  302 GAGSQSASNGALVGDANVRGIQSQLRGLLT-EVQSGSVQIMAQLGITQDPvkgsdgTVGNLKVDTDKLKKALTENPNAVQ 380
Cdd:pfam07195  76 TLDEETKKAGALAGDSTLRSILSQLRSVLSsSVSDGSISSLADIGITTDS------DYGTLELDEEKLDKALKENPDSVA 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  381 QYFVGDGK--KTGMATQMNNtltTMLSTSTGSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVT 458
Cdd:pfam07195 150 ELFTGDGSrvDTGFAKRLTD---LLKSYVGASNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVS 226


                  ....
gi 697053291  459 KMTN 462
Cdd:pfam07195 227 KMNA 230
fliD PRK07737
flagellar hook-associated protein 2;
16-473 1.02e-36

flagellar hook-associated protein 2;


Pssm-ID: 236082 [Multi-domain]  Cd Length: 501  Bit Score: 141.48  E-value: 1.02e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  16 DLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTAT-AALGKATTWNSTSV-SSTNTAFTATTTADASVGS 93
Cdd:PRK07737  16 DIVSKLMKTERAPLDKLTQKKQTLEWQRDSYREMNTLLKDLDDYIfNNITRQSTYLKKTVtSSNESVVTATASSSAANGS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  94 FVVNVNQVAkaqalTTGSYANNTDLLGDTTG-TTRKITITQPGTKTP--LEVTLADGDTsLAGIASAINKANGNVTASVI 170
Cdd:PRK07737  96 TTMQVTQLA-----TAATWKSSAKTSFYTGAdQTLTFNVTNPGETTAktVEISVKQTDT-LDDVISKLNSSDLGVSAFKD 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 171 KAKDG-DY--RLMLSSKTTGTDGEMTISVTGD-DKLQNAIGYNSTTKTGALTVNTGAQNAIVVVNSISIERQTNTITdaL 246
Cdd:PRK07737 170 KIWNGtEYveTIAITSKATGAGASIQAADGATaSFFSQQLGFTNLDADNELTAKTEGQNAQVTINGLQTERTSNTFT--I 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 247 PGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTK------YVPVDAGAGS-----------QSAS 309
Cdd:PRK07737 248 NGVTYTLKNTTAGTVTLSVATDVDGIFNKIKDFVDKYNELIDKINAKLKeeryrdYPPLTDEQKEamtekqielweEKAK 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 310 NGALVGDANVRGIQSQLR-GLLTEVQ---SGSVQImAQLGITQDPVKgSDGtvGNLKVDTDKLKKALTENPNAVQQYFVG 385
Cdd:PRK07737 328 SGLLRGDSILSSALSKMRmDFYTKVEgidGGFSQL-AQIGITTSSNY-LDG--GKLEIDETKLRQKIKENPDAVYQLFNS 403

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 386 DGKKT-----GMATQMNNTLTTMLSTSTGSAG--VIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVT 458
Cdd:PRK07737 404 GGSSSnynekGIARRLRDTLKETIKSIEQKAGntTMTNQQFAIGKDLNQIETQIDRFQDRLKQIEDRYYKKFSAMEKAIQ 483

                        490
                 ....*....|....*
gi 697053291 459 KMTNTANYLTQQFSQ 473
Cdd:PRK07737 484 KANEQSMYLMNALGG 498
PRK12765 PRK12765
flagellar filament capping protein FliD;
3-395 7.47e-28

flagellar filament capping protein FliD;


Pssm-ID: 237194 [Multi-domain]  Cd Length: 595  Bit Score: 116.92  E-value: 7.47e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   3 TISNLGIGSAGL--GDLYNQLDAAERT-KLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTW-NSTSVSSTN 78
Cdd:PRK12765   5 SLSSLGFGSDGVlsQDTIDKLKEADQKaQIDPITTKIEENTTKQKDLTAIKTLLSNFKTSVSSLADETSYlKRKVSISDN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  79 TAFTATTTADASVGSFVVNVNQVAKAQALTTGSYANNTDLLGDTTGTTRKITITQPGTKTPLEVTLAdgdTSLAGIASAI 158
Cdd:PRK12765  85 PPASVTVNSGVNLQSMKINVSQLAQKDVYQSKGFANDSSFVNATLTGETDLTIFSNGKEYTITVDKS---TTYRDLADKI 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 159 NKA-NGNVTASVIK-AKDGDYRLMLSSKTTGTDGEMTISVTGD------------DKLQNAIGYNSTTKTGALTVNTG-- 222
Cdd:PRK12765 162 NEAsGGKIQAKILNvGGKNPYRLVLQSKETGADNAISFYAGKKdaqsdndaenifKSLGWDLDDTSTIDPGKDKKGYGik 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 223 --------AQNAIVVVNSISIERQTNTITDALPGVTFSLKAESKADetLEVTRATDANQKAITDWVTAYNSLQSTINSLT 294
Cdd:PRK12765 242 daslhiqtAQNAEFTYNGIKITRSSNTIDDLGVGVTLTLNKTGSIN--FDIQQDTEGVTKAVEDLVDAYNNLVTNLNAAT 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 295 KYvpvdagaGSQSASNGALVGDANVRGIQSQLR----GLLTEVQSGSVQIMAQLGITQDpvkgSDGTvgnLKVDTDKLKK 370
Cdd:PRK12765 320 SY-------NSETGTKGTFQGVSEITSIRSSILadlfSQVVDGTDEDGKSLQDFGLSLN----SDGT---LSFDSSKFEQ 385

                        410       420
                 ....*....|....*....|....*
gi 697053291 371 ALTENPNAVQQYFVGDGKKTGMATQ 395
Cdd:PRK12765 386 KVSEDPDSTQSFFSGSTKYEDISHT 410
fliD PRK06664
flagellar hook-associated protein FliD; Validated
 186-467 1.74e-19

flagellar hook-associated protein FliD; Validated


Pssm-ID: 235848 [Multi-domain]  Cd Length: 661  Bit Score: 91.37  E-value: 1.74e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 186 TGTDGEMTISVT----GDDKLQNaIGYNSTTKT---------------GALTVN--TGAQNAIVVVNSISIERQTNTITD 244
Cdd:PRK06664 333 NASDNFEKVELPlgelSDLKALN-IENNANNKAivirnieifdpkargGALPVNakSEAKDAKIKFDGVEVERDKNEITD 411

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 245 ALPGVTFSLKAESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLT-----------KYVPvDAGAGSQSASNGAL 313
Cdd:PRK06664 412 LIPGVTLNLHKASEDPVTLKIEPDYEKIKNLIIEFVAAYNEVLAEINIVTsnekssiieelTYLS-DEEKEEAYKNLGLL 490

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 314 VGDANVRGIQSQLRGLLTEV----QSGSVQIMAQLGITQDPV--KGSDGTVGNLKVDTDKLKKALTENPNAVQQYFV--- 384
Cdd:PRK06664 491 RGEFTLLRLKSRLKTIISSSyptsDDNAFRMLNQIGISTNSVgsSGGLIQDGYLELDEKKLDEVLKENPDSVRELFAfds 570

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 385 -GDGK-KTGMATQMnntlTTMLSTSTGSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDVLVTKMTN 462
Cdd:PRK06664 571 nGDAVmDNGVAKML----LEYLSPYTQAGGIIYNKVKGLDERIADNNKKIEEYEKKLESKERKLKGKYLTMDQTVKKMKE 646


                 ....*
gi 697053291 463 TANYL 467
Cdd:PRK06664 647 QSNYL 651
fliD PRK06798
flagellar hook-associated protein 2;
27-385 2.68e-17

flagellar hook-associated protein 2;


Pssm-ID: 180698 [Multi-domain]  Cd Length: 440  Bit Score: 84.06  E-value: 2.68e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  27 TKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSVSSTNTAFTATttadasvGSFVVNVNQVAKAQA 106
Cdd:PRK06798  44 NQKQSLTSEKLLYASLKKEFSSFLQTFKDLTTFKGNEKKVTLSQEGYITVQADASAIA-------GTYNITVENLAQRHQ 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 107 LTTGSYANNTDLLGdtTGTTRKItitqpGTKtplEVTLaDGDTSLAGIASAINKANGNVTASVIKAKdgdyrLMLSSKTT 186
Cdd:PRK06798 117 ITSKPVPDIDAKIG--VDETIKI-----NGK---EIKV-TKDMTYKDLINKINSGNYGVSAYTLGNK-----IFFTSTTE 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 187 GTDGEMTIsVTGDDKLQNAIGYnSTTKTGALTVNTGAQNAIVVVNSISIERQTNTItDALPGVTFSLKAESKADETLEVT 266
Cdd:PRK06798 181 GEEGSIKF-TDGDSGFLEAIGL-VQSSGVAANDITAAENAEYTINGIKGTSATNKI-ETIPGVTINLKKETTEPIKLTIQ 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 267 RATDANQ-KAITDWVTAYNSLQSTinsltkyvpVDAGAGSqsasNGALVGDANVRGIQSQLRGLLTEVQSGSVQIMAQLG 345
Cdd:PRK06798 258 DSNVKDAaNLIKKMVDEYNKAVST---------VDLFAGK----GGALQGSAIMFSINRAMNNVFTFSQDGNYLFSFGIQ 324

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 697053291 346 ITQDpvkgsdgtvGNLKVDTDKLKKALTENPNAVQQYFVG 385
Cdd:PRK06798 325 VDKE---------GTMKVDEEALKKALKENPDAAKQFFFG 355
fliD PRK08453
flagellar filament capping protein FliD;
130-453 1.97e-13

flagellar filament capping protein FliD;


Pssm-ID: 181432 [Multi-domain]  Cd Length: 673  Bit Score: 72.56  E-value: 1.97e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 130 TITQPGTKTPLEVTLADGDTS---LAGIASAINKAngnvtASVIKAKDGDYRLMLSSKTtgtdGEMTISvtGDDKLQN-- 204
Cdd:PRK08453 334 VISIGGIKLDLSALTKEGNTSeenADAIAQAINAK-----AGLYAFKNAEGKLVINSKT----GMVTIK--GEDALGKks 402

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 205 --AIGYNSTTKTGALTVNT---------GAQNAIVVVNSISIERQTNTITDALPGVTFSLKAESKADE--TLEVTRATDA 271
Cdd:PRK08453 403 lkDLGLKAGTVQSYEASQEtlfmsknlqKASDAKFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKpaIISVSRDNQA 482

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 272 NQKAITDWVTAYNSLQSTINSLTKYvpvdagaGSQSASNGALVGDANVRGIQSQLRGLL-TEVQS-GSVQIMAQLGITQD 349
Cdd:PRK08453 483 IIDSLKEFVKAYNELIPKLDEDTRY-------DADTKIAGIFNGVGDIRSIRSSLNNVFsYSVHTdNGVESLMKYGLSLD 555

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 350 pvkgsdgTVGNLKVDTDKLKKALTENPNAVQQYFVGDGKKT---------GMATQMNNTLTTMLSTSTGSAGVIQNAKDG 420
Cdd:PRK08453 556 -------EKGVMTLDEAKLSSALNSDPKATQDFFYGSDSKDmggreihqeGIFSKFNQVIANLIDGGNAKLKIYEDSLTR 628

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 697053291 421 INKTL--------KTLGERYDAME---ATIDATMARYKTQFTSL 453
Cdd:PRK08453 629 DAKSLtkdkenaqELLKTRYDIMAerfAAYDSQISKANQKFNSV 672
FliD_N pfam02465
Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 16-105 5.01e-13

Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the N-terminal region of this family of proteins.


Pssm-ID: 460566 [Multi-domain]  Cd Length: 97  Bit Score: 64.89  E-value: 5.01e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291   16 DLYNQLDAAERTKLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSVSSTNTAFTATTTADASV-GSF 94
Cdd:pfam02465   7 SIVDQLMAAERAPLDRLEQQKTTLEWKQSAYGELNSKLSSLQSALKALSSSSTFNAKKATSSNESVVTATASSGAAaGSY 86

                          90
                  ....*....|.
gi 697053291   95 VVNVNQVAKAQ 105
Cdd:pfam02465  87 SIEVTQLAQAQ 97
fliD PRK08724
flagellar filament capping protein FliD;
223-460 3.76e-08

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 55.65  E-value: 3.76e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 223 AQNAIVVVNSIS-IERQTNTITDALPGVTFSLK---AESKADETLEVTRATDANQKAITDWVTAYNSLQSTINSLTKYVP 298
Cdd:PRK08724 438 AQDSMVVLDGVAqLSSNNNVIEDAIEGVDLTLKgktDKNKPPAEIGVEYDRQSVRNDIEQFVAAYNQFYQTSKALSGVDP 517

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 299 VdagagsqSASNGALVGDANVRGIQSQLRGLL-TEVQSG--SVQIMAQLGITQDpvkgsdgTVGNLKVDTDKLKKALTEN 375
Cdd:PRK08724 518 A-------TGQKGPLAGDSTVRSADSRLKSVFsSSIEQApeNLKSLTEFGITTT-------RQGTLEINYDMLDRQLNNN 583

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 376 PNAVQQYFvgdGKKTGMATQMNNtlttMLSTSTGSAGVIQNAKDGINKTLKTLGERYDAMEATIDATMARYKTQFTSLDV 455
Cdd:PRK08724 584 FNKLEEFF---GGNTGFAKRVED----AIQSMTGVTGSIRTREKSLREQNYRLNDDQVALDRRMESLEKRTHAKFAAMQD 656


                 ....*
gi 697053291 456 LVTKM 460
Cdd:PRK08724 657 ATGKM 661
fliD PRK08724
flagellar filament capping protein FliD;
24-200 3.77e-06

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 49.48  E-value: 3.77e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291  24 AERT-KLTTITSQQSTYNAQLSAYGKLQSAMTSLQTATAALGKATTWNSTSVSSTNTAFTATTTADASV-GSFVVNVNQV 101
Cdd:PRK08724  24 AERVpKQQRIDNERTDIDTSISAYGRLRESLDTMKNLMTNFRQEKAFAVRTVDTSDEDVVSATATTDAIaGKYAIDVLQL 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697053291 102 AKAQALTTGSyanntdLLGDTTGTTRKITITQPGTKTPLEVTladGDTSLAGIASAINKANGN--VTASVIKAKDGDyRL 179
Cdd:PRK08724 104 AQSHKVASDV------LDEDAKFGPGKLQISLGDKSFTLDVV---GNSKLVDIVRGINGAKSNpgVRASIINDVEGP-RL 173

                        170       180
                 ....*....|....*....|.
gi 697053291 180 MLSSKTTGTDGEMTISVTGDD 200
Cdd:PRK08724 174 ILASNVSGKDNQIKISVDAEY 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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