|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
68-727 |
5.76e-173 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 510.19 E-value: 5.76e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 68 LGQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGlkFDG-DDMTFGGLSgVLPRQVVD 146
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRG--FSAsGDIYVDGLR-DPGQYRRD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 147 TQMVDRIEIFKGANSLMNGAASsgVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSdqFGARVNLVHRE 226
Cdd:COG4774 78 TFNLERVEVLKGPASVLYGRGS--PGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGMYRD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 227 GETGIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFH---GSPTSVNISavdfvPEPPKNDRNFSQKWAYSNIENE 302
Cdd:COG4774 154 SDSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDDRTpdyGVPAVANGR-----PVDVDRSTFYGQPDDYSDSETD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 303 FGMWRSEYDITDGWTAYTGLGAQHAHEEGIYSAPKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGY 382
Cdd:COG4774 229 SATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 383 SaMTKNEKIAWKMSAAKDNPTTNIYHntgvdmPDSTNFnGSGGKYSDPLTSGRTRTQGWLLSDTLGvLDDKLLFTAGARH 462
Cdd:COG4774 309 E-YSREDSDNARYSGGGTAPTVNLYN------PVYGAP-VTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRY 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 463 QKVVIRGYNKVTGAENAadGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGKTAPnTATNYGQSTGIVHSKQNEVGVK 542
Cdd:COG4774 380 DRFDTDYTDRTTGATTS--SYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAP-SLSNAGQALDPEKSRQYEVGVK 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 543 ADF--GRVGGSLALFEIKMPSAIL---DNSGHYGLDAEQRNRGVELNVFGEPALGMRLNASATWLQAELTKTKNGVNQGN 617
Cdd:COG4774 457 WDLldGRLSLTAALFRIEKTNVRTtdpANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGN 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 618 DAIGIPNFYAVLGAEYDIkPIDGLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFAvnhneNQMTVRAGIDNVTN 697
Cdd:COG4774 537 RLPNVPRHSASLWTTYDL-PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN-----KNLTLRLNVNNLTD 610
|
650 660 670
....*....|....*....|....*....|
gi 697052230 698 ENYWASVDDSGtYITQGEPRTFKVSVGYAF 727
Cdd:COG4774 611 KRYYASAYGSG-YVTPGAPRTVLLSASYRF 639
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
75-727 |
2.58e-109 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 345.94 E-value: 2.58e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 75 DVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFV-QGYGNSAETYRIRGLK--FDGDDMTFGGLSGVLP--RQVVDTQM 149
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGNITIRGFGleVDIDNVYLDGVPLLSRgnLAIVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 150 VDRIEIFKGANSLMNGaaSSGVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSDQFGARVNLVHREGET 229
Cdd:TIGR01783 81 VERVEVLRGPASLLYG--GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 230 GIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFHGSPTSVNISAvDFVPEPPKNDRNFSQ--KWAYSNIENEFGMW 306
Cdd:TIGR01783 159 FYDGAGEETRLGATATDWQlDDRTLLRLGAYYQKERDRGGYGGLPASG-GTSGRDLSSDRYLGTssNRNYDDREYLSYGL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 307 RSEYDITDGWTAYTGLGAQHAHEEGIYS-APKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGYSAM 385
Cdd:TIGR01783 238 SLEYQFNDVWTGKQNLRYSYFDTDSNQVqASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLLGVSYG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 386 TKNEKIaWKMSAAKDNPTTNIYhntgvdmPDSTNFNGSGGKYSDPLTSGRTRTQGwLLSDTLGVLDDKLLFTAGARHQKV 465
Cdd:TIGR01783 318 QRTTNR-FNNTGYPSDNIYSLT-------ATSSARTDIGDSPKDRALSSTTKALN-GVALQRILLADKWTLTLGGRYDSV 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 466 VIRGYNKVTGAEnaaDGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGIVHSKQNEVGVKADF 545
Cdd:TIGR01783 389 DVKSNNGVAGST---GKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYDL 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 546 G-RVGGSLALFEIKMPSAIL---DNSGHYGLDAEQRNRGVELNVFGEPALGMRLNASATWLQAELTKTKNGVNQGNDAIG 621
Cdd:TIGR01783 466 GdSLLATAALFRITKDNQLVqdpVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTVPF 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 622 IPNFYAVLGAEYDIKPID-GLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFAVNHNenqMTVRAGIDNVTNENY 700
Cdd:TIGR01783 546 VPKHTASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKN---LTLALNVNNLFDRDY 622
|
650 660
....*....|....*....|....*....
gi 697052230 701 WASVDD--SGTYITQGEPRTFKVSVGYAF 727
Cdd:TIGR01783 623 YTSGYRwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
79-727 |
1.83e-95 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 309.00 E-value: 1.83e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 79 NIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGLKFDGDDMTFGGLSGVLPRQV-------VDTQMVD 151
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGrgvdlntIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 152 RIEIFKGANSLMNGaaSSGVGGMINLEPKHAGELPQAKVGVDYTSDSQI---GTTLDAGRRYGDSDQFGARVNLVHREGE 228
Cdd:cd01347 81 RVEVLKGPSSALYG--SGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGssgGGGFDVSGALADDGAFGARLYGAYRDGD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 229 TGIPND------RRRTTLLSTGLDYTG-DRFRTSLDLGYQKKTFHGSPTSVNI-SAVDFVPEPPKNDRNFSQKWAYSNIE 300
Cdd:cd01347 159 GTIDGDgqaddsDEERYNVAGKLDWRPdDDTRLTLDAGYQDQDADGPGGTLPAnGTGSSLGGGPSSNTNGDRDWDYRDRY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 301 NEFGMWRSEYDITD-GWTAYTGLGAQHAHEEGIYSAPKLVDKS--GKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHK 377
Cdd:cd01347 239 RKRASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNGGNNAagGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAHT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 378 VNIGYSAMTknekiawkmsaakdnpttniyhntgvdmpdstnfngsggkysdplTSGRTRTQGWLLSDTLGvLDDKLLFT 457
Cdd:cd01347 319 LTLGVEYRR---------------------------------------------EELDEKQTALYAQDTIE-LTDDLTLT 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 458 AGARHQKvvIRGYNKVTGAENAADGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGIV----- 532
Cdd:cd01347 353 LGLRYDH--YDQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVgnpnl 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 533 ---HSKQNEVGVKADFG-RVGGSLALFEIKMPSAILDNSGH--------YGLDAEQRNRGVELNVFGEPALGMRLNASAT 600
Cdd:cd01347 431 kpeKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTNtglglvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYT 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 601 WLQAELTKTkNGVNQGNDAIGIPNFYAVLGAEYDIkPIDGLTATARVNHSGAQYADLA---NTKKLDSYTTLDLGMRYRF 677
Cdd:cd01347 511 YTDTEVKRT-DGATTGNRLPGIPKHTANLGLDYEL-PDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQF 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 697052230 678 avnhNENqMTVRAGIDNVTNENYWASVDD--SGTYITQGEPRTFKVSVGYAF 727
Cdd:cd01347 589 ----TKN-LTLRLGVNNLFDKDYYTSLSVrgSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
259-725 |
1.68e-31 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 128.73 E-value: 1.68e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 259 GYQKKTFHGSPTSVNISAVDFVPEPPKNDRNFSQKWAY---SNIENEFGMWRSEYDITDGWTAYTGLGAQHAHEEGIYSA 335
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGndgGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 336 PKLvdksgKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGYSAMTKNEKIAWKMSAAKDNPTTNIYHNTGVDMP 415
Cdd:pfam00593 81 LRL-----GLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 416 DSTNFNGSGGKYSDpltsGRTRTQGWLLSDTLGvLDDKLLFTAGARHQKVVIRGYNKVTGAENAAdgFDGSRWMPTYGVV 495
Cdd:pfam00593 156 PYDPANPSSSSYSD----TTTDSYGLYLQDNIK-LTDRLTLTLGLRYDHYSTDGDDGNGGGDNFS--RSYSAFSPRLGLV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 496 YKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGIV----------HSKQNEVGVKADFGRVGGSLALFEIKMPSAILD 565
Cdd:pfam00593 229 YKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVaggnpdlkpeTSDNYELGLKYDDGRLSLSLALFYIDIKNLITS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 566 NSGHYGLDA---------EQRNRGVELNVFGEPALGMRLNASATWLQAEltKTKNGVNQGNDAIGIPNFYAVLGAEYDIk 636
Cdd:pfam00593 309 DPDGPGLGGtvytytnvgKARIRGVELELSGRLWGLGLSGGGYTYTDAD--DDADADDTGNPLPNVPRHTANLGLTYDF- 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 637 PIDGLTATARVNHSGAQ---YADLANTKKLDSYTTLDLGMRYRFAVNhnenqMTVRAGIDNVTNENY--WASVDDSGTYI 711
Cdd:pfam00593 386 PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNKN-----LTLRLGVNNLFDKYYkrYYSSGGGNLGG 460
|
490
....*....|....
gi 697052230 712 TQGEPRTFKVSVGY 725
Cdd:pfam00593 461 YPGPGRTFYLGLSY 474
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
30-727 |
1.98e-20 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 96.47 E-value: 1.98e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 30 EDTLVVQTAPASDfKPGGDQlvpaflDGQV---ANGGRMGMLGQqnamDVPFNIISYTSKLVEDQQAKTIADVVANDAGV 106
Cdd:PRK10003 40 EDTVIVEGSATAP-VDDGEQ------DYSVkttSAGTKMQMTQR----DIPQSVSIVSQQRMEDQQLQTLGEVMENTLGI 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 107 QFVQGYGNSAeTYRIRGLKFDG---DDM-TFGGLSGVLPRQVVDTQMVDRIEIFKGANSLMNGAASSGVGgmINLEPKHA 182
Cdd:PRK10003 109 SKSQADSDRA-LYYSRGFQIDNymvDGIpTYFESRWNLGDALSDTALFERVEVVRGATGLMTGTGNPSAA--INMVRKHA 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 183 GELP-QAKVGVDYTSDSQIGTTLDAGRRYGDSDQFGARVNLVHREGETGIPNDRRRTTLLSTGLDY-TGDrfRTSLDLGY 260
Cdd:PRK10003 186 TSREfKGDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDAdLGD--LTTLSAGY 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 261 Q-KKTFHGSPTSVNISAVDFVPEPPKNDRNFSQ--KWAYSNIENE--FGMWRSEYDitDGWTAYtgLGAQHAHEE---GI 332
Cdd:PRK10003 264 EyQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTapDWAYNDKEINkvFMTLKQRFA--DTWQAT--LNATHSEVEfdsKM 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 333 YSAPKLVDKSGKATVSRLDTNRIS-DSVSGMAGVRGNFNTGFVSHKVNIGYSAMTKNEKIAWKMSAAK-DNPTTNIYHNT 410
Cdd:PRK10003 340 MYVDAYVDKATGMLVGPYSNYGPGfDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKqNNRYFSSWANI 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 411 GVDmpDSTNFNGSGGKYSDP------LTSGRTRTQGWLLSDTLGVLDDKLLFTAGARHQKVVIRGYNKvtgaenaadGFD 484
Cdd:PRK10003 420 FPD--EIGSFYNFNGNFPQTdwspqsLAQDDTTHMKSLYAATRVSLADPLHLILGARYTNWRVDTLTY---------SME 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 485 GSRWMPTYGVVYKPWEEISLYANHTEALQP-------GK-TAPNTATNYgqstgivhskqnEVGVKADF--GRVGGSLAL 554
Cdd:PRK10003 489 KNHTTPYAGLVYDINDNWSTYASYTSIFQPqndrdssGKyLAPITGNNY------------ELGLKSDWmnSRLTTTLAI 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 555 FEIKMPS-------AILDNSGHYGLDAEQR--NRGVELNVFGEPALGMRLNASATWLQAElTKTKNGVNQgndaiGIPNF 625
Cdd:PRK10003 557 FRIEQDNvaqstgtPIPGSNGETAYKAVDGtvSKGVEFELNGAITDNWQLTFGATRYIAE-DNEGNAVNP-----NLPRT 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 626 YAVLGAEYDIKPIDGLTATARVNHSGAQYADLA---NTKKLD--SYTTLDLGMRYRFAVNhnenqMTVRAGIDNVTNENY 700
Cdd:PRK10003 631 TVKLFTRYRLPVMPELTVGGGVNWQNRVYTDTVtpyGTFRAEqgSYALVDLFTRYQVTKN-----FSVQGNVNNLFDKTY 705
|
730 740
....*....|....*....|....*..
gi 697052230 701 WasvDDSGTYITQGEPRTFKVSVGYAF 727
Cdd:PRK10003 706 D---TNVEGSIVYGAPRNFSITATYQF 729
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
68-727 |
5.76e-173 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 510.19 E-value: 5.76e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 68 LGQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGlkFDG-DDMTFGGLSgVLPRQVVD 146
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRG--FSAsGDIYVDGLR-DPGQYRRD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 147 TQMVDRIEIFKGANSLMNGAASsgVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSdqFGARVNLVHRE 226
Cdd:COG4774 78 TFNLERVEVLKGPASVLYGRGS--PGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGMYRD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 227 GETGIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFH---GSPTSVNISavdfvPEPPKNDRNFSQKWAYSNIENE 302
Cdd:COG4774 154 SDSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDDRTpdyGVPAVANGR-----PVDVDRSTFYGQPDDYSDSETD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 303 FGMWRSEYDITDGWTAYTGLGAQHAHEEGIYSAPKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGY 382
Cdd:COG4774 229 SATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 383 SaMTKNEKIAWKMSAAKDNPTTNIYHntgvdmPDSTNFnGSGGKYSDPLTSGRTRTQGWLLSDTLGvLDDKLLFTAGARH 462
Cdd:COG4774 309 E-YSREDSDNARYSGGGTAPTVNLYN------PVYGAP-VTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRY 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 463 QKVVIRGYNKVTGAENAadGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGKTAPnTATNYGQSTGIVHSKQNEVGVK 542
Cdd:COG4774 380 DRFDTDYTDRTTGATTS--SYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAP-SLSNAGQALDPEKSRQYEVGVK 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 543 ADF--GRVGGSLALFEIKMPSAIL---DNSGHYGLDAEQRNRGVELNVFGEPALGMRLNASATWLQAELTKTKNGVNQGN 617
Cdd:COG4774 457 WDLldGRLSLTAALFRIEKTNVRTtdpANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGN 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 618 DAIGIPNFYAVLGAEYDIkPIDGLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFAvnhneNQMTVRAGIDNVTN 697
Cdd:COG4774 537 RLPNVPRHSASLWTTYDL-PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN-----KNLTLRLNVNNLTD 610
|
650 660 670
....*....|....*....|....*....|
gi 697052230 698 ENYWASVDDSGtYITQGEPRTFKVSVGYAF 727
Cdd:COG4774 611 KRYYASAYGSG-YVTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
56-727 |
3.98e-133 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 409.28 E-value: 3.98e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 56 DGQVANGGRMGMLGQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGlkFDGDDMTFGG 135
Cdd:COG4773 45 GGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGRDSFSIRG--FSIDNYLRDG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 136 L-SGVLPRQVVDTQMVDRIEIFKGANSLMNGAASsgVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSD 214
Cdd:COG4773 123 LpLGGFGGGQPDTANLERVEVLKGPAGLLYGAGS--PGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 215 QFGARVNLVHREGETGIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFHGSPTSVNISAVDF-VPeppkNDRNFSQ 292
Cdd:COG4773 201 TLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDlTDDTTLTLGAEYQDDDSTGDRGFLPLDGTLLdLP----RSTNLGE 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 293 KWAYSNIENEFGMWRSEYDITDGWTAYTGLGAQHAHEEG--IYSAPKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFN 370
Cdd:COG4773 277 PWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGrsAYAYGAPDAATGTLTRYASARDGDSRSDSLDANLNGKFE 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 371 TGFVSHKVNIGYSAMTKNEKiawkmSAAKDNPTTNIYHntgvdmPDSTNFNGSGGKYSDplTSGRTRTQGWLLSDTLGvL 450
Cdd:COG4773 357 TGGLEHTLLVGADYSRYDSD-----SDSATAGTINIYN------PVYGNLPEPDFDASD--TDTTTRQTGLYAQDQIS-L 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 451 DDKLLFTAGARHQKVVIRGYNKVTGAENAadgFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGktapNTATNYGQSTG 530
Cdd:COG4773 423 TDRLSLLLGGRYDWYETDSTNRLGGSTTS---YDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQ----SGADNNGNPLD 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 531 IVHSKQNEVGVKADF--GRVGGSLALFEIK---MPSAILDNSGHYGLDAEQRNRGVELNVFGEPALGMRLNASATWLQAE 605
Cdd:COG4773 496 PETGKQYEAGVKGELfdGRLNATLAVFDITqknVATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAK 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 606 LTKTKNGvNQGNDAIGIPNFYAVLGAEYDIK--PIDGLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFAvnhne 683
Cdd:COG4773 576 ITKDADA-LEGKRLTNVPRHTASLWTTYRFPsgALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLG----- 649
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 697052230 684 NQMTVRAGIDNVTNENYWASVdDSGTYITQGEPRTFKVSVGYAF 727
Cdd:COG4773 650 KNWTLQLNVNNLFDKKYYASS-GSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
75-727 |
2.58e-109 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 345.94 E-value: 2.58e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 75 DVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFV-QGYGNSAETYRIRGLK--FDGDDMTFGGLSGVLP--RQVVDTQM 149
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGNITIRGFGleVDIDNVYLDGVPLLSRgnLAIVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 150 VDRIEIFKGANSLMNGaaSSGVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSDQFGARVNLVHREGET 229
Cdd:TIGR01783 81 VERVEVLRGPASLLYG--GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 230 GIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFHGSPTSVNISAvDFVPEPPKNDRNFSQ--KWAYSNIENEFGMW 306
Cdd:TIGR01783 159 FYDGAGEETRLGATATDWQlDDRTLLRLGAYYQKERDRGGYGGLPASG-GTSGRDLSSDRYLGTssNRNYDDREYLSYGL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 307 RSEYDITDGWTAYTGLGAQHAHEEGIYS-APKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGYSAM 385
Cdd:TIGR01783 238 SLEYQFNDVWTGKQNLRYSYFDTDSNQVqASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLLGVSYG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 386 TKNEKIaWKMSAAKDNPTTNIYhntgvdmPDSTNFNGSGGKYSDPLTSGRTRTQGwLLSDTLGVLDDKLLFTAGARHQKV 465
Cdd:TIGR01783 318 QRTTNR-FNNTGYPSDNIYSLT-------ATSSARTDIGDSPKDRALSSTTKALN-GVALQRILLADKWTLTLGGRYDSV 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 466 VIRGYNKVTGAEnaaDGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGIVHSKQNEVGVKADF 545
Cdd:TIGR01783 389 DVKSNNGVAGST---GKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYDL 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 546 G-RVGGSLALFEIKMPSAIL---DNSGHYGLDAEQRNRGVELNVFGEPALGMRLNASATWLQAELTKTKNGVNQGNDAIG 621
Cdd:TIGR01783 466 GdSLLATAALFRITKDNQLVqdpVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTVPF 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 622 IPNFYAVLGAEYDIKPID-GLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFAVNHNenqMTVRAGIDNVTNENY 700
Cdd:TIGR01783 546 VPKHTASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKN---LTLALNVNNLFDRDY 622
|
650 660
....*....|....*....|....*....
gi 697052230 701 WASVDD--SGTYITQGEPRTFKVSVGYAF 727
Cdd:TIGR01783 623 YTSGYRwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
79-727 |
1.83e-95 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 309.00 E-value: 1.83e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 79 NIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGLKFDGDDMTFGGLSGVLPRQV-------VDTQMVD 151
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGrgvdlntIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 152 RIEIFKGANSLMNGaaSSGVGGMINLEPKHAGELPQAKVGVDYTSDSQI---GTTLDAGRRYGDSDQFGARVNLVHREGE 228
Cdd:cd01347 81 RVEVLKGPSSALYG--SGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGssgGGGFDVSGALADDGAFGARLYGAYRDGD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 229 TGIPND------RRRTTLLSTGLDYTG-DRFRTSLDLGYQKKTFHGSPTSVNI-SAVDFVPEPPKNDRNFSQKWAYSNIE 300
Cdd:cd01347 159 GTIDGDgqaddsDEERYNVAGKLDWRPdDDTRLTLDAGYQDQDADGPGGTLPAnGTGSSLGGGPSSNTNGDRDWDYRDRY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 301 NEFGMWRSEYDITD-GWTAYTGLGAQHAHEEGIYSAPKLVDKS--GKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHK 377
Cdd:cd01347 239 RKRASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNGGNNAagGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAHT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 378 VNIGYSAMTknekiawkmsaakdnpttniyhntgvdmpdstnfngsggkysdplTSGRTRTQGWLLSDTLGvLDDKLLFT 457
Cdd:cd01347 319 LTLGVEYRR---------------------------------------------EELDEKQTALYAQDTIE-LTDDLTLT 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 458 AGARHQKvvIRGYNKVTGAENAADGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGIV----- 532
Cdd:cd01347 353 LGLRYDH--YDQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVgnpnl 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 533 ---HSKQNEVGVKADFG-RVGGSLALFEIKMPSAILDNSGH--------YGLDAEQRNRGVELNVFGEPALGMRLNASAT 600
Cdd:cd01347 431 kpeKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTNtglglvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYT 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 601 WLQAELTKTkNGVNQGNDAIGIPNFYAVLGAEYDIkPIDGLTATARVNHSGAQYADLA---NTKKLDSYTTLDLGMRYRF 677
Cdd:cd01347 511 YTDTEVKRT-DGATTGNRLPGIPKHTANLGLDYEL-PDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQF 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 697052230 678 avnhNENqMTVRAGIDNVTNENYWASVDD--SGTYITQGEPRTFKVSVGYAF 727
Cdd:cd01347 589 ----TKN-LTLRLGVNNLFDKDYYTSLSVrgSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
70-709 |
2.42e-63 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 223.17 E-value: 2.42e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 70 QQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQfVQGYGNSAETYRIRGLKFDGDDMTF--------GGLSGVLP 141
Cdd:COG1629 12 DESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVS-VTSAGGGAGQISIRGFGGGGNRVLVlvdgvplnDPSGGDGG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 142 RQVVDTQMVDRIEIFKGANSLMNGAASSGvgGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGrryGDSDQFGARVN 221
Cdd:COG1629 91 LSYIDPEDIERVEVLRGPSSALYGSGALG--GVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLS---GGNGKLAYRLS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 222 LVHREGETGIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFHGSPtsvNISAVDFVPEPPKNDRNFSQKWAYSNIE 300
Cdd:COG1629 166 ASYRDSDGYRDNSDSDRYNLRAKLGYQlGDDTRLTLSASYSDSDQDSPG---YLTLAALRPRGAMDDGTNPYSNDTDDNT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 301 NEFGMWRSEYD-ITDGWTAYTGLGAQHAHEEGIYSAPKLVDKSGKATVSRLDTNRISDSVsgmagvRGNFNTGF-VSHKV 378
Cdd:COG1629 243 RDRYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGLEL------RLTYDLGFgGKHTL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 379 NIGYSAMTknekiawkmsaakdnpttniYHNTGVDMPDSTNFNGSGGKYSDPLTSGRTRTQGWLLSDTLGvLDDKLLFTA 458
Cdd:COG1629 317 LVGLDYQR--------------------QDLDGSGYPLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYK-LTDKLTLTA 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 459 GARHQKVVIRGYNKVTGAENAADGFDGSRWMPTYGVVYKPWEEISLYANHTEalqpGKTAPNTATNYGQSTGIVH----- 533
Cdd:COG1629 376 GLRYDYVSYDVDDTVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSR----GFRAPTFGELYANGTDPYSvgnpd 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 534 -----SKQNEVGVKADF--GRVGGSLALFEIKMPSAIL-----DNSG---HYGLDAEQRNRGVELNVFGEPALGMRLNAS 598
Cdd:COG1629 452 lkpetSTNYELGLRYRLldGRLSLSLALFYSDVDNEILsvplpNDSGfstYYTNAGKARSYGVELELSYQLTPGLSLNAS 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 599 ATWLQAELTKTKNGV--NQGNDAIGIPNFYAVLGAEYDIKpiDGLTATARVNHSGAQYADLANTKKLD-SYTTLDLGMRY 675
Cdd:COG1629 532 YSYTDAKFDDDTDGSadLDGNRLPGVPPLTANLGLTYEFP--GGWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGY 609
|
650 660 670
....*....|....*....|....*....|....
gi 697052230 676 RFAvnhneNQMTVRAGIDNVTNENYWASVDDSGT 709
Cdd:COG1629 610 RFG-----DNLTLSLGVDNLFDKKYATSLSVRAS 638
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
84-727 |
1.39e-38 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 152.77 E-value: 1.39e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 84 TSKLVEDQQAKTIADVVANDAGVQFV--QGYGNSAetyRI--RGLK----------FDGDDMTFGGLSG----VLPrqvv 145
Cdd:COG4772 49 DREELENQAATSLREVLRRVPGVNVQeeDGFGLRP---NIgiRGLGprrsrgitllEDGIPIAPAPYGDpaayYFP---- 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 146 DTQMVDRIEIFKGANSLMNGAASsgVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGrryGDSDQFGARVNLVHR 225
Cdd:COG4772 122 DLERMERIEVLRGAAALRYGPQT--VGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHASVG---GTVGNFGYLVEYSRK 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 226 EGETGIPNDRRRTTLLSTGLDY-TGDRFRTSLDLGYQKKTFHgspTSVNISAVDFvpeppKNDRNFSQKwAYSNIENEFG 304
Cdd:COG4772 197 RGDGFRDNSGFDINDFNAKLGYrLSDRQELTLKFQYYDEDAN---TPGGLTDAQF-----DADPRQSYR-PADQFDTRRT 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 305 MW--RSEYDITDGWTAYTGLGAQHAHEEGIYsaPKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGY 382
Cdd:COG4772 268 QLslRYEHQLSDNTTLTTTAYYNDFSRNWYI--RQNTADPNTPGLGLRGNPRGYRSYGIEPRLTHRFELGGVPHTLEVGL 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 383 SamtknekiawkmsaakdnpttniYHNtgvDMPDSTNFNGSGGKYSDPLTSGRTRTQGwllSDTLGV-------LDDKLL 455
Cdd:COG4772 346 R-----------------------YHR---EEEDRKQYVNTYGQGRSGAGLRRDRRFS---ADALAAyaqnrfeLTGRLT 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 456 FTAGARHQKVVIRGYNKVTGAENAADGFDGSR--WMPTYGVVYKPWEEISLYAN---------HTEALQPGKTAPN---- 520
Cdd:COG4772 397 LTPGLRYEHIRRDRTDRYSTRTGGDDSGSNSYseFLPGLGLLYQLTDNLQLYANvsrgfepptFGDLAYGNGGNPDlkpe 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 521 TATNYgqstgivhskqnEVGVKAD-FGRVGGSLALFEIKMPSAILDNSGHYGLDAEQRN------RGVELNVFGEPA--- 590
Cdd:COG4772 477 KSWNY------------ELGTRGRiGNGLSAEVALFYIDYDNELGSCSAAGGDRSTFTNagetrhQGLELALDYDLLkgg 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 591 -LGMRLNASATWLQAELTKTKNGVNQGNDAIGIPNFYAVLGAEYDIKpidGLTATARVNHSGAQYADLANTK------KL 663
Cdd:COG4772 545 gLGLPLFAAYTYTDAEFTSDFGPVFAGNRLPYVPRHQLTAGLGYEHG---GWTANLNGRYVSEQFTDAANTVadgsfgKI 621
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 697052230 664 DSYTTLDLGMRYRFAVNhnenqMTVRAGIDNVTNENYWASVDDSGTY-ITQGEPRTFKVSVGYAF 727
Cdd:COG4772 622 PSYTVLDLSASYDFGKN-----LSLFAGVNNLFDKRYIASRAPNYAAgIRPGPPRTVYAGLRLKF 681
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
259-725 |
1.68e-31 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 128.73 E-value: 1.68e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 259 GYQKKTFHGSPTSVNISAVDFVPEPPKNDRNFSQKWAY---SNIENEFGMWRSEYDITDGWTAYTGLGAQHAHEEGIYSA 335
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGndgGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 336 PKLvdksgKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGYSAMTKNEKIAWKMSAAKDNPTTNIYHNTGVDMP 415
Cdd:pfam00593 81 LRL-----GLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 416 DSTNFNGSGGKYSDpltsGRTRTQGWLLSDTLGvLDDKLLFTAGARHQKVVIRGYNKVTGAENAAdgFDGSRWMPTYGVV 495
Cdd:pfam00593 156 PYDPANPSSSSYSD----TTTDSYGLYLQDNIK-LTDRLTLTLGLRYDHYSTDGDDGNGGGDNFS--RSYSAFSPRLGLV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 496 YKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGIV----------HSKQNEVGVKADFGRVGGSLALFEIKMPSAILD 565
Cdd:pfam00593 229 YKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVaggnpdlkpeTSDNYELGLKYDDGRLSLSLALFYIDIKNLITS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 566 NSGHYGLDA---------EQRNRGVELNVFGEPALGMRLNASATWLQAEltKTKNGVNQGNDAIGIPNFYAVLGAEYDIk 636
Cdd:pfam00593 309 DPDGPGLGGtvytytnvgKARIRGVELELSGRLWGLGLSGGGYTYTDAD--DDADADDTGNPLPNVPRHTANLGLTYDF- 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 637 PIDGLTATARVNHSGAQ---YADLANTKKLDSYTTLDLGMRYRFAVNhnenqMTVRAGIDNVTNENY--WASVDDSGTYI 711
Cdd:pfam00593 386 PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNKN-----LTLRLGVNNLFDKYYkrYYSSGGGNLGG 460
|
490
....*....|....
gi 697052230 712 TQGEPRTFKVSVGY 725
Cdd:pfam00593 461 YPGPGRTFYLGLSY 474
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
70-677 |
1.62e-29 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 124.20 E-value: 1.62e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 70 QQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAET-YRIRGLK-------FDGDDMTFGGLSGVLP 141
Cdd:COG4771 38 EQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSSgISIRGLGgdrvlvlIDGVPVNNPALGGGGD 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 142 RQVVDTQMVDRIEIFKGANSLMNGaaSSGVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAgRRYGDSDQFGARVN 221
Cdd:COG4771 118 LSYIPPDDIERIEVIRGPASALYG--SDAIGGVINIITKKPTDELEGSVSLGYGSNGNGTYSGSL-SLGGPGDKLSFLLS 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 222 LVHREGE--------TGIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKKTFHGSPTSVNISAVDFVPEPPKNDRNFSQ 292
Cdd:COG4771 195 GSYRDRDgyldyrngGFVGNSGYERYNLNAKLGYRlSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRG 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 293 KWAysnienefgmWRSEYDITDGWTAYtgLGAQHAHEEGIYSApklvdksgkatvSRLDTNRISDSVSGMAGVRGNFNTG 372
Cdd:COG4771 275 NYS----------LRYNGDLGDNLDLS--LYYSRTDRDSTNGS------------LGGSTGSFSDSDDTTYGLELDLTYP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 373 F-VSHKVNIGYSAMTknekiawkmsaakdnpttniyhntgvDMPDSTNFNGSggkysdplTSGRTRTQGWLLSDTLgVLD 451
Cdd:COG4771 331 LgGNHTLTLGAEYRY--------------------------DDLDSSSFLGG--------ADASRDTYGLFAQDEW-KLT 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 452 DKLLFTAGARHQKVvirgynkvtgaeNAADGFDGSRWMPTYGVVYKPWEEISLYANHTEALQpgktAPNTATNYGQSTGI 531
Cdd:COG4771 376 DKLTLTAGLRYDYY------------STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFR----APSLAELYGSGTGT 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 532 V-------------HSKQNEVGVKADF--GRVGGSLALFEIKMPSAILDNSGHYGLDA--------EQRNRGVELNVFGE 588
Cdd:COG4771 440 PgryvlgnpdlkpeTSDNYELGLEYRLgnGGLSLSLTGFYTDIKDLIVLVPVGPGPGDvlqyenvgKARTYGLELELKYR 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 589 PALGMRLNASATWLQAELTKTkngvNQGNDAIGIPNFYAVLGAEYDIKPIDGLTATARVNHSGA-QYADLANTKKLDSYT 667
Cdd:COG4771 520 LGKGLTLTASYTYLDSKIDDG----DTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYvTPPSGRLEGYTPGYT 595
|
650
....*....|
gi 697052230 668 TLDLGMRYRF 677
Cdd:COG4771 596 LLDLRASYKL 605
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
30-727 |
1.98e-20 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 96.47 E-value: 1.98e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 30 EDTLVVQTAPASDfKPGGDQlvpaflDGQV---ANGGRMGMLGQqnamDVPFNIISYTSKLVEDQQAKTIADVVANDAGV 106
Cdd:PRK10003 40 EDTVIVEGSATAP-VDDGEQ------DYSVkttSAGTKMQMTQR----DIPQSVSIVSQQRMEDQQLQTLGEVMENTLGI 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 107 QFVQGYGNSAeTYRIRGLKFDG---DDM-TFGGLSGVLPRQVVDTQMVDRIEIFKGANSLMNGAASSGVGgmINLEPKHA 182
Cdd:PRK10003 109 SKSQADSDRA-LYYSRGFQIDNymvDGIpTYFESRWNLGDALSDTALFERVEVVRGATGLMTGTGNPSAA--INMVRKHA 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 183 GELP-QAKVGVDYTSDSQIGTTLDAGRRYGDSDQFGARVNLVHREGETGIPNDRRRTTLLSTGLDY-TGDrfRTSLDLGY 260
Cdd:PRK10003 186 TSREfKGDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDAdLGD--LTTLSAGY 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 261 Q-KKTFHGSPTSVNISAVDFVPEPPKNDRNFSQ--KWAYSNIENE--FGMWRSEYDitDGWTAYtgLGAQHAHEE---GI 332
Cdd:PRK10003 264 EyQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTapDWAYNDKEINkvFMTLKQRFA--DTWQAT--LNATHSEVEfdsKM 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 333 YSAPKLVDKSGKATVSRLDTNRIS-DSVSGMAGVRGNFNTGFVSHKVNIGYSAMTKNEKIAWKMSAAK-DNPTTNIYHNT 410
Cdd:PRK10003 340 MYVDAYVDKATGMLVGPYSNYGPGfDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKqNNRYFSSWANI 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 411 GVDmpDSTNFNGSGGKYSDP------LTSGRTRTQGWLLSDTLGVLDDKLLFTAGARHQKVVIRGYNKvtgaenaadGFD 484
Cdd:PRK10003 420 FPD--EIGSFYNFNGNFPQTdwspqsLAQDDTTHMKSLYAATRVSLADPLHLILGARYTNWRVDTLTY---------SME 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 485 GSRWMPTYGVVYKPWEEISLYANHTEALQP-------GK-TAPNTATNYgqstgivhskqnEVGVKADF--GRVGGSLAL 554
Cdd:PRK10003 489 KNHTTPYAGLVYDINDNWSTYASYTSIFQPqndrdssGKyLAPITGNNY------------ELGLKSDWmnSRLTTTLAI 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 555 FEIKMPS-------AILDNSGHYGLDAEQR--NRGVELNVFGEPALGMRLNASATWLQAElTKTKNGVNQgndaiGIPNF 625
Cdd:PRK10003 557 FRIEQDNvaqstgtPIPGSNGETAYKAVDGtvSKGVEFELNGAITDNWQLTFGATRYIAE-DNEGNAVNP-----NLPRT 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 626 YAVLGAEYDIKPIDGLTATARVNHSGAQYADLA---NTKKLD--SYTTLDLGMRYRFAVNhnenqMTVRAGIDNVTNENY 700
Cdd:PRK10003 631 TVKLFTRYRLPVMPELTVGGGVNWQNRVYTDTVtpyGTFRAEqgSYALVDLFTRYQVTKN-----FSVQGNVNNLFDKTY 705
|
730 740
....*....|....*....|....*..
gi 697052230 701 WasvDDSGTYITQGEPRTFKVSVGYAF 727
Cdd:PRK10003 706 D---TNVEGSIVYGAPRNFSITATYQF 729
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
69-727 |
1.13e-17 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 87.45 E-value: 1.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 69 GQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGLKFDG-----DDMTFGGLSGV--LP 141
Cdd:TIGR01785 11 TRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDNRvlvvvDGARQNYQRGGahNG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 142 RQVVDTQMVDRIEIFKGANSLMNGaaSSGVGGMINLEPKHAGEL--PQAKVGVDYTSDSQigttlDAGRRYGDSDQFGAR 219
Cdd:TIGR01785 91 SLFVDPELLKRIEIVKGPSSSLYG--SGALGGVVAFRTKDAADLlrPGQLFGGLAKLSYG-----SNNNSFGGSVAVAGR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 220 vnlvHREGETGIPNDRRRTtllstgldytGDRFRTS-----LDLGYQKKTFHGSPTS--VNISAVDFVPEPPKNDRNFSQ 292
Cdd:TIGR01785 164 ----LDDNLDALVAATYRD----------GGNYRNGnkeeaTNSAYVQKNLLAKLGWqlDDAQRLEFSYFTTEGSLDEAQ 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 293 KwAYSNIENEFGMWR-------------SEYDITDGWTAYTGLGAQHAHEEGIYSAPKLVDKSGKATVSRLDTNrisdsv 359
Cdd:TIGR01785 230 N-SGPGTEYVLGSSStllasstrdrsatLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGREEGYQYTTY------ 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 360 sgmaGVRGNFNTGFvshkvnigysAMTKNEKIAWKMSAAKDnptTNIYHNTGVDMPDSTNFNGSGGKysdpltsgRTRTQ 439
Cdd:TIGR01785 303 ----GATLQNTSRF----------DVASWSTLTYGVDWMKD---KRRTESFDPNSVTTIVPNPPSAK--------EYFFG 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 440 GWLlSDTLGVLDDKLLFTAGARHQKVVIRGYnkvTGAENAADGFDGSRWMPTYGVVYKPWEEISLYANHTEALQPgKTAP 519
Cdd:TIGR01785 358 LFL-QDNIPLLDDRLTLSAGLRYDHYKLSPK---TTADTEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRA-PSID 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 520 NTATNYGQSTGIVH-------------SKQNEVG-------VKADFGRVGGSLALFEIKMPSAILDNSGHY-GLDAEQRN 578
Cdd:TIGR01785 433 ELYGTGDHPGTPGGytfapnpnlkpetSKTWELGanlsfdnLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTdNVTAGMNN 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 579 RGVELNVFGEPALGMRLNAS------ATWLQAELTKTKN-GVNQGNDaiGIPNFYAVLGAEYDIkPIDGLTATARVNHSG 651
Cdd:TIGR01785 513 ITQYVNIDGARIRGIEASASydaglwATGLSYGYTIGKDqNTNQWLS--NIPPLKLVVTVGYRF-PDRRLDLGAKAAYYE 589
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 652 AQ-----YADLA--NTKKLDSYTTLDLGMRYRFAvnhNENQMTVRAGIDNVTNENYWASVDDSGTyitqGEPRTFKVSVG 724
Cdd:TIGR01785 590 RQsesptTEDVAanGLLTTPGYTVVDLYATYQPN---AVKGLTVRFGVNNLTDRKYTPAQSVPGA----GPGRNFKGSVK 662
|
...
gi 697052230 725 YAF 727
Cdd:TIGR01785 663 YQF 665
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
26-678 |
1.85e-16 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 83.66 E-value: 1.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 26 DNQKEDTLVVQTAPASDFKPGGDqlVPAFLDGQVANGGRMGMLGQQNamdvPFNIISYTSKLVEDQQAKTIADVVANDAG 105
Cdd:PRK10044 35 VEPKEETITVTAAPAPQESAWGP--AATIAAKRSATGTKTDTPIEKT----PQSISVVTAEEMALHQPKSVKEALSYTPG 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 106 VQF-VQGYGNSAETYRIRGLKFDG--DDMTFGGL---SGVLPRQVVDTQMVDRIEIFKGANSLMNGaaSSGVGGMINLEP 179
Cdd:PRK10044 109 VSVgTRGASNTYDHLIIRGFAASGqsQNNYLDGLklqGNFYNDAVIDPYMLERAELMRGPVSVLYG--KSNPGGLLNMVS 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 180 KHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSDQFGARVNLVHREGE-----------------TGIPNDRRRTTLLS 242
Cdd:PRK10044 187 KRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANaqqkgseeqryaiapsfTWRPDDKTNFTFLS 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 243 TgldytgdrFRTSLDLGY-----QKKTFHGSPTSVNISAvDFVPEPPKNDRNFSQKWAYSNIENEFgmwrseydiTDGWT 317
Cdd:PRK10044 267 Y--------FQNEPETGYygwlpKEGTVEPLPNGKRLPT-DFNEGAKNNTYSRNEKMVGYSFDHEF---------NDTFT 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 318 AYTGL--GAQHAHEEGIYSAPKLVDKSGKATVSRLDTNRISDSVSGMAGVRGNFNTGFVSHKVNIGYSAM-TKNEKIAWK 394
Cdd:PRK10044 329 VRQNLryAENKTSQRSVYGYGVCSDKGHYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMrMRNDINAWF 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 395 MSAAKDNPTtNIYHNTGVDMpdstNFNGSGGKYSdplTSGRTRTQGWLLSDTLGVldDKLLFTAGARHQKVVIRGYNKVT 474
Cdd:PRK10044 409 GYADSVPLL-NLYGPVNTDF----DFNANSGPYQ---ILNKQKQTGLYVQDQAEW--DKWLVTLGGRYDWADQSSLNRVN 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 475 GAENAADgfDGS-RWMPtyGVVYKPWEEISLYANHTEALQPGKTAPNTATNYGQSTGivhsKQNEVGVK-ADFGR-VGGS 551
Cdd:PRK10044 479 GTTDKRD--DKQfTWRG--GVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKG----KQYEAGVKyVPKDRpIVVT 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 552 LALFEI---KMPSAILDNSGHYGLDAEQRNRGVELNvfGEPALGMRLN--ASATWLQAELTKTKNgvNQGNDAIGIPNFY 626
Cdd:PRK10044 551 GAVYQLtktNNLTADPENSFFSVQGGEIRARGVELE--AKAALSANVNvtGSYTYTDAEYTTDTT--YKGNTPAQVPKHM 626
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 697052230 627 AVLGAEYDIK--PIDGLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFA 678
Cdd:PRK10044 627 ASLWADYTFFdgPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLA 680
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
73-170 |
6.73e-16 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 73.84 E-value: 6.73e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 73 AMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETYRIRGLKFDGDDMTFGGL------SGVLPRQVVD 146
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGFGSNRVLVLVDGVplnsggGGSVDLNSID 81
|
90 100
....*....|....*....|....
gi 697052230 147 TQMVDRIEIFKGANSLMNGAASSG 170
Cdd:pfam07715 82 PEDIERVEVLKGPASALYGSGAIG 105
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
70-320 |
2.76e-15 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 76.83 E-value: 2.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 70 QQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQ-GYGNSAETYRIRGLKF-------DGDDMTFGGLSGVLP 141
Cdd:COG4206 9 EQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSsGGPGSAASISIRGLGSnqtlvliDGVPLNDPSLGGVDL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 142 RQVvDTQMVDRIEIFKGANSLMNGaaSSGVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLDAGrryGDSDQFGARVN 221
Cdd:COG4206 89 SLI-PPDDIERIEVLKGAASALYG--SDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLS---GGAGKFSYSLS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 222 LVHREGE-------TGIPNDRRRTTLLSTGLDYT-GDRFRTSLDLGYQKK--TFHGSPTSVNISAVDFVPEPPKNDRNFS 291
Cdd:COG4206 163 ASYRRSDgyryndpDLRNNDGYENTSLNARLGYKlGDNGSLSLSGGYSDSerGYPGAVGSDRNLRLSLSLEYKLSDGWSL 242
|
250 260
....*....|....*....|....*....
gi 697052230 292 QKWAYSNIENEFGMWRSEYDITDGWTAYT 320
Cdd:COG4206 243 LLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
28-727 |
1.02e-14 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 77.92 E-value: 1.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 28 QKEDTLVVQTAPASDFKPggDQLV-PAFldgqvanggrmgmlgQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGV 106
Cdd:PRK09840 39 NADDTLVVEASTPSLYAP--DQSAdPKF---------------SQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 107 Q--FVQGYGNS--AETYRIRGlkFDGDDMTF-GGLS--GVLPRQVVDTQmvdRIEIFKGANSLMNGAASSGvgGMINLEP 179
Cdd:PRK09840 102 GtfFAGENGNTttGDAIYMRG--FDTSNSIYvDGIRdiGSISRDTFNTE---QVEVIKGPSGTDYGRSAPT--GSINMIS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 180 KHAGELPQAKVGVDYTSDSQIGTTLDAGRRYGDSDQFgaRVNLV----HREGETGIPNDRRRTT-LLSTGLdytGDRFRT 254
Cdd:PRK09840 175 KQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAV--RLNVMgektHDAGRDKVKNERYGVApSVAFGL---GTANRL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 255 SLDLGYQKKTF---HGSPT------SVNISAVDFVPEPPK-NDRNF-SQKWAYSNIENEFGMWRSEYDITDG-------- 315
Cdd:PRK09840 250 YLNYLHVTQNNtpdGGIPTiglpgySAPSAGRAALNHAGKvDTHNFyGTDSDYDDSTTDTATMRFEHDINDNttlrnttr 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 316 W---------TAYTGlGAQHaheegiYSAPKLVDKSgKATVSRL-----DTNRIsdsVSGMAGVRGNFNTGFVSHKVNIG 381
Cdd:PRK09840 330 WsrvkqdyllTAIMG-GASN------ITTPTPSDVN-TWTWSRTantkdVSNKI---LTNQTNLTSTFYTGSIGHDVSTG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 382 YSaMTKNEKIAWKMSAAKdNPTTNIYHntgvdmPDStNFNGSGGKYSDPLTSGRTRTQGWLLSDTLGvLDDKLLFTAGAR 461
Cdd:PRK09840 399 VE-FTRETQTNYGVNPVT-LPAVNLYH------PDS-SIHPGGLTRNGANANGQTDTFAIYAFDTLQ-LTRDWELNGGIR 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 462 --HQKVvirGYNKVTGAENAADG----------------FDGSR------WmpTYGVVYKPWEEISLYANHTEALQP--- 514
Cdd:PRK09840 469 ldNYHT---EYDSATACGGSGRGaitcpagvakgspvttVDTAKsgnlvnW--KAGALYKLTENGNVYINYAVSQQPpgg 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 515 ------GKTAPNTATNYGQSTGivHSKQNEVGVKADF--GRVGGSLALFEIKMPSAILDNS-GHYGLDAEQRNRGVELNV 585
Cdd:PRK09840 544 snfalaQSGSGNSANRTDFKPQ--KANTSEIGTKWQVldKRLLLTAALFRTDIENEVEQNDdGTYSQYGKKRVEGYELSV 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 586 FGEPALGMRLNASATWLQAELTKTKNGVNQGNDAIG-IPNFYAVLGAEYDIKPidGLTATArvnhsGAQYADLANTKK-- 662
Cdd:PRK09840 622 AGNITPAWQVIAGYTQQKATVKNGKDVAQDGSSSLPyTPEHAFTLWSQYQATD--DLSVGG-----GARYIGSMHRGSdg 694
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 697052230 663 -------LDSYTTLDLGMRYRfaVNHNenqMTVRAGIDNVTNENYWASVDDSGTYITQGEPRTFKVSVGYAF 727
Cdd:PRK09840 695 avgtpafTEGYWVADAKLGYR--VNRN---LDLQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 761
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
56-678 |
4.56e-11 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 66.08 E-value: 4.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 56 DGQVANGGRMGMLGQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQfVQGYGNSA--ETYRIRGLkfdgdDMTF 133
Cdd:PRK14049 59 DGYVATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGAR-VGAFGFDPrfDAFFVRGF-----DVTY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 134 GGLSGVLPRQVVDTQMVDRIE--------IFKGANSLMNGAasSGVGGMINLEPKHAGELPQAKVGVDYTSDSQIGTTLD 205
Cdd:PRK14049 133 TGVFRDNLRQPGASSSIFKTEpyglegvsILRGPSSALYGA--SGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 206 AGRRYGDSDQFGARVNLVHREGET---GIPNDRrrtTLLSTGLDYTGDRFRTSLDLGYQKKT-------FHGSPTSVNIS 275
Cdd:PRK14049 211 FSGPVNETDPVYYRLTGLLRDADTeqvGVPDDR---AYIAPAFTWKPDEDTRLTVLGEYSRTktggtaaYYNDPLTGEVT 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 276 AVdFVPEPPKNDrnFSQKWAysNIENEFgmwrsEYDITDGWT-------AYTGLGAQHAheeGIYSA----PKLVDKSGK 344
Cdd:PRK14049 288 DI-FAGNPAFND--SVQKQG--RIGYEF-----EHRLNDTFVfrqnarvSTLNIDADWA---FAYAPnaadPTLLDSSAG 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 345 ATVSRLdTNRISDSVsgmagVRGNFNTGFVSHKVNIGYSAMtkneKIAWKMsaakdnpttniYHNTGVDMPDSTNfNGSG 424
Cdd:PRK14049 355 TYDERL-TAFVIDNQ-----LEAKFDTGAFEHTLLAGVDYT----KLRFRA-----------LNGRGVSPPLDTK-NPTQ 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 425 GKYSDPLT-SGRTRTQGWLLSDTL--GVLDDKLLFTAGAR------HQKVVIRGYNKVTGAENAADGFDGSrwmptYGVV 495
Cdd:PRK14049 413 GRPVAAIDfSTRTVQDQWQLGTYLqdQIRYDAWTLTAGGRydwvstDTDTTDLATDSLTTVSQKDKEFSGR-----IGLT 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 496 YKPWEEISLYANHTEALQPgKTAPNTATNygQSTGIVHSKQNEVGVKADFGRVGG--SLALFEIKMPSAIL-----DNSG 568
Cdd:PRK14049 488 YETDFGLAPYISYSTAFSP-NAGFNRATN--QPFKPTESEQQEVGVKYLLPNSNTliTAALFNIDQTNGLYyevvfLAAG 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 569 HYGLDAEQ---RNRGVELNVFGEPALGMRLNASATWLQAELTKTKNGvNQGNDAIGIPNFYAVLGAEYDIK---PIDGLT 642
Cdd:PRK14049 565 PTNIQVQRgklRSRGFELEANTSLDNGLSLIASYTYTDVKIIQGPEG-TIGNEVSSVPNHMASAWAHYTLPeggPLYGLG 643
|
650 660 670
....*....|....*....|....*....|....*.
gi 697052230 643 ATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRFA 678
Cdd:PRK14049 644 LGAGARFVGSSYGNDQNTFKNSSRVLFDASVGYDFA 679
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
536-722 |
8.06e-08 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 55.58 E-value: 8.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 536 QNEVGVKADFGRVGGSL--ALFEI--KMPSAILDNSGHYGLDAEQRNRGVELNVFGEPALGMRLNASATWLQAELTKTKN 611
Cdd:PRK14050 538 QYEAGIKYEPSFIDGLItaSVFQItkKNVTVTDPLTFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDAN 617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 612 GVNQGNDAIGIPNFYAVLGAEYDIK--PIDGLTATARVNHSGAQYADLANTKKLDSYTTLDLGMRYRfavnhnENQMTVR 689
Cdd:PRK14050 618 PSLIGNSPYLVPETQASLWLDYAVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYE------KNDWGAS 691
|
170 180 190
....*....|....*....|....*....|....*.
gi 697052230 690 AGIDNVTNENYWASVddSGTYIT-QGEPR--TFKVS 722
Cdd:PRK14050 692 LNVANLFDKEYVAGC--QGLLVCgYGESRtiTLKLS 725
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
579-727 |
9.70e-03 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 39.37 E-value: 9.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052230 579 RGVELNVFGEPALGMRLNASATWLQAEltkTKNGVNQGNDAIGIPNFyaVLGAEYDIKPIDGLTATARVNHSGAQYADL- 657
Cdd:PRK13483 523 QGVEASLSYPITSTLSLSGNYTYTDSE---QKSGAYKGSPLNQLPKH--LFQASLNWEPTDRLNSWARVNYRGEESQPTt 597
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697052230 658 ---ANTKKLDSYTTLDLGMRYRFAvnhneNQMTVRAGIDNVTNENywASVDDSGtYITQGepRTFKVSVGYAF 727
Cdd:PRK13483 598 gpsSSSFIAPSYTFLDLGANYQLT-----DNLKLSAGIYNLFDKE--INYEEYG-YVEDG--RRYWLGMTYSF 660
|
|
| |
