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Conserved domains on  [gi|697052221|ref|WP_033144827|]
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MULTISPECIES: fimbria assembly protein [Enterobacter]

Protein Classification

fimbria assembly protein( domain architecture ID 10013380)

fimbria assembly protein similar to fimbrial proteins, SfmFand FimF

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09934 PRK09934
fimbriae assembly protein;
4-173 3.36e-96

fimbriae assembly protein;


:

Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 275.62  E-value: 3.36e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   4 RIRFLTVALFALCTQAQADTALGEINIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPP 83
Cdd:PRK09934   3 RVFFACFCGLLWSPLSWAADPLGEINIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  84 GAASITFSGkADGSNSGLLALNDASTASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIATADNPQPGRAD 163
Cdd:PRK09934  83 GSASITFTG-TPASDTNLLALDDPAMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAK 161

                        170
                 ....*....|
gi 697052221 164 ADATFMINYN 173
Cdd:PRK09934 162 ADATFMINYN 171
 
Name Accession Description Interval E-value
PRK09934 PRK09934
fimbriae assembly protein;
4-173 3.36e-96

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 275.62  E-value: 3.36e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   4 RIRFLTVALFALCTQAQADTALGEINIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPP 83
Cdd:PRK09934   3 RVFFACFCGLLWSPLSWAADPLGEINIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  84 GAASITFSGkADGSNSGLLALNDASTASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIATADNPQPGRAD 163
Cdd:PRK09934  83 GSASITFTG-TPASDTNLLALDDPAMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAK 161

                        170
                 ....*....|
gi 697052221 164 ADATFMINYN 173
Cdd:PRK09934 162 ADATFMINYN 171
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
8-173 5.17e-47

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 150.96  E-value: 5.17e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   8 LTVALFALCTQAQADTALGEINIRlyGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPGA-- 85
Cdd:COG3539    6 LALLLALALSAAAAAAADGTVNFT--GTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTsn 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  86 -ASITFSGKADGSNSGLLALNDASTASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIATADNPQPGRADA 164
Cdd:COG3539   84 sVKVTFTGTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNA 163


                 ....*....
gi 697052221 165 DATFMINYN 173
Cdd:COG3539  164 TATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
28-173 2.91e-18

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 76.71  E-value: 2.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   28 INIRLYGNIVDFTCVAEGSDSDkAVPLGTWPTKQLSTTGSRTQPMPFTLKLTgCPPGAASI----TFSGKADGSNSGLLA 103
Cdd:pfam00419   1 INFTGTVTRVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLE-CSSGSSAVkvtvGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697052221  104 L-NDASTASNVAVEIRDADKTRLALQQASQ--PVSVDAQGNAILSFYANYIATA-DNPQPGRADADATFMINYN 173
Cdd:pfam00419  79 TgNGAGAATGVGIRLYDANGGALPPNNGTSsiPVSATAAVATGITFTASLVATTgGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK09934 PRK09934
fimbriae assembly protein;
4-173 3.36e-96

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 275.62  E-value: 3.36e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   4 RIRFLTVALFALCTQAQADTALGEINIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPP 83
Cdd:PRK09934   3 RVFFACFCGLLWSPLSWAADPLGEINIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  84 GAASITFSGkADGSNSGLLALNDASTASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIATADNPQPGRAD 163
Cdd:PRK09934  83 GSASITFTG-TPASDTNLLALDDPAMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAK 161

                        170
                 ....*....|
gi 697052221 164 ADATFMINYN 173
Cdd:PRK09934 162 ADATFMINYN 171
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
8-173 5.17e-47

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 150.96  E-value: 5.17e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   8 LTVALFALCTQAQADTALGEINIRlyGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPGA-- 85
Cdd:COG3539    6 LALLLALALSAAAAAAADGTVNFT--GTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTsn 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  86 -ASITFSGKADGSNSGLLALNDASTASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIATADNPQPGRADA 164
Cdd:COG3539   84 sVKVTFTGTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNA 163


                 ....*....
gi 697052221 165 DATFMINYN 173
Cdd:COG3539  164 TATFTIDYQ 172
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
30-172 9.98e-19

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 78.84  E-value: 9.98e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  30 IRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPP---GAASITFSGKADGSNSGLLAL-- 104
Cdd:PRK15194  35 IHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCDPvvaATAAVAFSGQADATNDNLLAVas 114

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221 105 -NDASTASNVAVEIRDADKTRLALQQASQPVSVD-AQGNAILSFYANYIATADNPQPGRADADATFMINY 172
Cdd:PRK15194 115 sTNTTTATGVGIEILDNTSSILKPDGATFSANQNlIEGTNTLHFSARYKATGTSASAGQANADATFIMKY 184
Fimbrial pfam00419
Fimbrial protein;
28-173 2.91e-18

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 76.71  E-value: 2.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   28 INIRLYGNIVDFTCVAEGSDSDkAVPLGTWPTKQLSTTGSRTQPMPFTLKLTgCPPGAASI----TFSGKADGSNSGLLA 103
Cdd:pfam00419   1 INFTGTVTRVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLE-CSSGSSAVkvtvGLFGTADASSPNLLL 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697052221  104 L-NDASTASNVAVEIRDADKTRLALQQASQ--PVSVDAQGNAILSFYANYIATA-DNPQPGRADADATFMINYN 173
Cdd:pfam00419  79 TgNGAGAATGVGIRLYDANGGALPPNNGTSsiPVSATAAVATGITFTASLVATTgGTPTAGDFNATATIVVDYQ 152
lpfA PRK15289
fimbrial protein; Provisional
 8-172 5.05e-18

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 77.31  E-value: 5.05e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   8 LTVALFALCTQAQADTALGEIN-IRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPG-- 84
Cdd:PRK15289   5 IIGGAFTLASLMLAGHALAEDGvVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATyt 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  85 AASITFSGKADGSNSGLLALND---------------ASTASNVAVEIRD-ADKTRLALQQASQPVSVDAQGNAILSFYA 148
Cdd:PRK15289  85 QAAVRFDGTEAPGGDGDLKVGTpltagnpgdftgtgqAIAATGVGIRIFNqSDNSQVKLYNDSAYTAIDAEGKAEMKFIA 164

                        170       180
                 ....*....|....*....|....
gi 697052221 149 NYIATADNPQPGRADADATFMINY 172
Cdd:PRK15289 165 RYVATNATVTAGTANADSQFTVEY 188
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 12-173 3.48e-14

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 66.53  E-value: 3.48e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  12 LFALCTQAQADTAL-----GEINIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPGA- 85
Cdd:PRK15209   5 VFALSALALTSTSVfaaesGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTn 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  86 --ASITFSGKADGSNSGLLALN-DASTASNVAVEIRDADKTRLALQQASQPVSVdAQGNAILSFYANYIATADNPQPGRA 162
Cdd:PRK15209  85 kkVNVSFNGVGDADDSTLVSVStEAGAATGVGIGIYDNANTLVELNTGKSTTTL-AAGQTVLYFTANYVSTKDTVTTGYG 163

                        170
                 ....*....|.
gi 697052221 163 DADATFMINYN 173
Cdd:PRK15209 164 NAEVDFNLSYE 174
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 34-172 4.19e-14

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 66.28  E-value: 4.19e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  34 GNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPGAASIT--FSGKADGSNSGLLALNDA-STA 110
Cdd:PRK15191  29 GTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTvsFSGAADSRNTDLLALTAGeSDA 108

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697052221 111 SNVAVEIRDADKTRLALQQASQPVSVD-AQGNAILSFYANYIATADNPQPGRADADATFMINY 172
Cdd:PRK15191 109 SGIGIALYDQNKTLIPLGQESDVVTLSpGQASAHLQFYARYLADGGAVTPGDANASATFILAY 171
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 3-172 4.43e-14

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 66.64  E-value: 4.43e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   3 NRIRF-LTVALFALCTQAQADTALGEINIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGC 81
Cdd:PRK15190   2 NRSHCaLFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNC 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  82 PPG--AASITFSGKADGSNSGLLALNDAST------ASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIAT 153
Cdd:PRK15190  82 SRGiaGAKIWFTGEPDPDNPALLAITDTGMgsgnmlASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKST 161

                        170
                 ....*....|....*....
gi 697052221 154 ADNPQPGRADADATFMINY 172
Cdd:PRK15190 162 RPTVTSGNATAVMYFDMQY 180
PRK15210 PRK15210
fimbrial protein;
1-172 7.47e-12

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 60.87  E-value: 7.47e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   1 MRNRIRFLTVA--------LFALCTQAQADtALGEINIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGSRTQPM 72
Cdd:PRK15210   1 MRNKIILAMAAagmmygasVFAADTTPTAG-PFGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  73 PFTLKLTGC--------PPGAA------SITFSGKADGSNSgllALNDASTASNVAVEIRDADKTRLALQQASQPVSvDA 138
Cdd:PRK15210  80 PFTIHLQNCafdpnipdTAGSAgkmskvTVSFSGTANTSKK---AYTTSGSAQHVGVQLLKSDNTSIIEPNTPMPDG-DA 155

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 697052221 139 Q----GNAILSFYANYIATADNPQPGRADADATFMINY 172
Cdd:PRK15210 156 QqlqaGNNELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 10-172 1.19e-11

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 60.09  E-value: 1.19e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  10 VALFALCTQAQADTAlgeiNIRLYGNIVDFTC-VAEGSDSDKAVPLGTWPTKQLSTTGsRTQPMPFTLKLTGCPPGAAS- 87
Cdd:PRK15260  15 VMLWAVCNTLPAATP----NVHYSGKLVAGACnLVVDNDTMATVDFHTIGSDNFDASG-QTTPVPFTLSLQDCKTALANg 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  88 --ITFSGKADGSNSGLLALNDASTASNVAVEIRDADKTRLALQQASQPVSVDAQGNAILSFYANYIATA-DNPQPGRADA 164
Cdd:PRK15260  90 vlVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAgEEVMPGEFSG 169


                 ....*...
gi 697052221 165 DATFMINY 172
Cdd:PRK15260 170 SATVSFEY 177
PRK15296 PRK15296
fimbrial protein SthA;
10-172 3.87e-09

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 53.17  E-value: 3.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  10 VALFALCTQAQADTALGEINIRLYGNIVDFTC-VAEGSDSDKAVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCP------ 82
Cdd:PRK15296   6 IIILAMLTAVASTPVFAQNTITFNGKIYDQACtVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPeagtgv 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  83 PGAASITFSGKADGSNSGLLALNDAST---ASNVAVEIRDADKTRLALQQASQPVSVDAQG-NAILSFYANYIATADNP- 157
Cdd:PRK15296  86 PTQAMFRFHGATDDSNPTYFKNADEGSetgAAGVGISIQNASHSDVTDNTDDAAVNLPTDGsTADFTYYAAMANDGSATv 165

                        170
                 ....*....|....*
gi 697052221 158 QPGRADADATFMINY 172
Cdd:PRK15296 166 TGGDVSTQVTYTVSY 180
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 19-172 3.80e-08

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 50.24  E-value: 3.80e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  19 AQADTALGEI-NIRLYGNIVDFTCVAEGSDSDkaVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPGA-ASITFSGKADG 96
Cdd:PRK15205  20 MAAPTDLGPAgDIHFTITIKAKACELEKDSLE--VDMGTMVLQKPVKVGTELNQKNFSIGLKDCDGISkASVTMDGSPDP 97

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697052221  97 SNSGLLALnDASTASNVAVEIRDADKTRLALQQAS-QPV--SVDAQGNAILSFYANYIATADNPQPGRADADATFMINY 172
Cdd:PRK15205  98 DDPSLFAL-DAGGATGVALKIKTSKGTQQYPKSTDgTPVewAINGDGTTQLNYIASYVPVNADATVGTANATVNFSVTY 175
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 1-173 8.32e-08

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 49.71  E-value: 8.32e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   1 MRNRIRFLTVALFA--LCTQAQADTAlGEINIRLYGNIVDFTCVAEGSDSDkaVPLGTWPTKQLSTTGSRTQPMPFTLKL 78
Cdd:PRK15300   1 MKLSLKTLTVALAAitLSPAALADTA-KDGTVHITGLIKQNACTVKTDSVE--VTLQEEFASLFTAAGQTAGDTDFTIEL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  79 TGCPPGAAS---ITFSGKADGSNSGLLalNDASTASNVAVEIRDADKTRLA---LQQASQPVSV-DAQGNAILS--FYAN 149
Cdd:PRK15300  78 ENCDANVYSsvqARFEGTLDGTDATIL--KNEDDAENIGVQILDKTSTPMTfndLQAWSAAVALpTAEGVTELSmpFTAR 155

                        170       180
                 ....*....|....*....|....
gi 697052221 150 YIATADNPQPGRADADATFMINYN 173
Cdd:PRK15300 156 YIATAVPVKSGTVDATATFYLQYN 179
PRK15293 PRK15293
fimbrial protein SthD;
7-92 2.39e-05

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 42.74  E-value: 2.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221   7 FLTVALFALCTQAQADTAlGEINIRLYGNIVDFTCVAEGSDSdkaVPLGTWPTKQLSTTGSRTQPMPFTLKLTGCPPGA- 85
Cdd:PRK15293  15 FTGLALWSPSISAAYNTA-DAVDINVTGLIYADPCTVTVPDT---LSLGQYARADIAVAGGNTATIPFTIKMTNCPATTt 90


                 ....*...
gi 697052221  86 -ASITFSG 92
Cdd:PRK15293  91 kAAISFNG 98
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
10-172 6.69e-04

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 38.30  E-value: 6.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  10 VALFALCTQAQADTALGEI-NIRLYGNIVDFTCVAEGSDSDKAVPLGTWPTKQLSTTGS-RTQPMPFTLKLTGCPPGAAS 87
Cdd:PRK15200   8 LVGLVLMSPVIAQPVMVESgRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSfAPVSVPFSLRLISCSAEVWR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697052221  88 ---ITFSGKADGSNSGL-LALNDASTASNVAVEIRDADKTRL---ALQQASQPVSVDaqgNAILSFYANYIATADNPQPG 160
Cdd:PRK15200  88 hvgIAFAGVTPAEDPHVfLASGEGIGNAGIGLALFDDQQRQIipnTLPLHYAPILTS---EMTLHFTARYRAISENMTPG 164

                        170
                 ....*....|..
gi 697052221 161 RADADATFMINY 172
Cdd:PRK15200 165 RIHSEVWFTLVY 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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