|
Name |
Accession |
Description |
Interval |
E-value |
| YjcC |
COG4943 |
Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal ... |
1-268 |
1.15e-93 |
|
Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal transduction mechanisms];
Pssm-ID: 443970 [Multi-domain] Cd Length: 528 Bit Score: 286.04 E-value: 1.15e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 1 MLLVTVSLL-SGLMIYILIMNRAELNSsLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFI 79
Cdd:COG4943 245 LLLLPLGLLlSLLLGLLVLRLLRRRLS-PRRRLRRAIKRREFYVHYQPIVDLKTGRCVGAEALVRWRDPDGSVISPDIFI 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 80 PLSEREGLQEDVTLFVINHAIREFIHTAIQN-EIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQGGDF 158
Cdd:COG4943 324 PLAEQSGLISPLTRQVIEQVFRDLGDLLAADpDFHISINLSASDLLSPRFLDDLERLLARTGVAPQQIVLEITERGFIDP 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 159 EGMKIHIDKYKNHGVRFAIDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVE 238
Cdd:COG4943 404 AKARAVIAALREAGHRIAIDDFGTGYSSLSYLQTLPVDILKIDKSFVDAIGTDSANSAVVPHIIEMAKTLNLDVVAEGVE 483
|
250 260 270
....*....|....*....|....*....|
gi 695771011 239 TQEQVNYLKTFWPQsYAQGWYYSRALPLEE 268
Cdd:COG4943 484 TEEQADYLRARGVQ-YGQGWLFAKPLPAEE 512
|
|
| EAL |
cd01948 |
EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL ... |
30-268 |
1.50e-74 |
|
EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Pssm-ID: 238923 [Multi-domain] Cd Length: 240 Bit Score: 227.43 E-value: 1.50e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 30 ARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFI-HTAI 108
Cdd:cd01948 1 ADLRRALERGEFELYYQPIVDLRTGRIVGYEALLRWRHPEGGLISPAEFIPLAEETGLIVELGRWVLEEACRQLArWQAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 109 QNEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQ-GGDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNL 187
Cdd:cd01948 81 GPDLRLSVNLSARQLRDPDFLDRLLELLAETGLPPRRLVLEITESAlIDDLEEALATLRRLRALGVRIALDDFGTGYSSL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 188 NLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTfWPQSYAQGWYYSRALPLE 267
Cdd:cd01948 161 SYLKRLPVDYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGLKVVAEGVETEEQLELLRE-LGCDYVQGYLFSRPLPAE 239
|
.
gi 695771011 268 E 268
Cdd:cd01948 240 E 240
|
|
| EAL |
smart00052 |
Putative diguanylate phosphodiesterase; Putative diguanylate phosphodiesterase, present in a ... |
34-268 |
9.85e-69 |
|
Putative diguanylate phosphodiesterase; Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Pssm-ID: 214491 [Multi-domain] Cd Length: 242 Bit Score: 212.85 E-value: 9.85e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 34 KALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHA---IREFIHTAIQN 110
Cdd:smart00052 6 QALENGQFLLYYQPIVSLRTGRLVGVEALIRWQHPEGGIISPDEFIPLAEETGLIVPLGRWVLEQAcqqLAEWQAQGPPP 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 111 eIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQG-GDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNLNL 189
Cdd:smart00052 86 -LLISINLSARQLISPDLVPRVLELLEETGLPPQRLELEITESVLlDDDESAVATLQRLRELGVRIALDDFGTGYSSLSY 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 695771011 190 VAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFWPQsYAQGWYYSRALPLEE 268
Cdd:smart00052 165 LKRLPVDLLKIDKSFVRDLQTDPEDEAIVQSIIELAQKLGLQVVAEGVETPEQLDLLRSLGCD-YGQGYLFSRPLPLDD 242
|
|
| EAL |
pfam00563 |
EAL domain; This domain is found in diverse bacterial signaling proteins. It is called EAL ... |
30-263 |
1.65e-59 |
|
EAL domain; This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.
Pssm-ID: 425752 [Multi-domain] Cd Length: 235 Bit Score: 189.07 E-value: 1.65e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 30 ARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFIHTAIQ 109
Cdd:pfam00563 2 RALRRALENGEFVLYYQPIVDLRTGRVVGYEALLRWQHPDGGLISPARFLPLAEELGLIAELDRWVLEQALADLAQLQLG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 110 NEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQG-GDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNLN 188
Cdd:pfam00563 82 PDIKLSINLSPASLADPGFLELLRALLKQAGPPPSRLVLEITESDLlARLEALREVLKRLRALGIRIALDDFGTGYSSLS 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 695771011 189 LVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTfWPQSYAQGWYYSRA 263
Cdd:pfam00563 162 YLLRLPPDFVKIDRSLIADIDKDGEARAIVRALIALAHSLGIKVVAEGVETEEQLEALRE-LGCDLVQGYYFSKP 235
|
|
| PRK11359 |
PRK11359 |
cyclic-di-GMP phosphodiesterase; Provisional |
22-268 |
1.72e-39 |
|
cyclic-di-GMP phosphodiesterase; Provisional
Pssm-ID: 183097 [Multi-domain] Cd Length: 799 Bit Score: 146.07 E-value: 1.72e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 22 AELNSSLSARFV------KALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFV 95
Cdd:PRK11359 532 PAMNEMVKERLVlgaalkEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 96 INHAIREFI--HTAIQNEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQGGDF-EGMKIHIDKYKNHG 172
Cdd:PRK11359 612 IAEACRQLAewRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMQAWGIDGHQLTVEITESMMMEHdTEIFKRIQILRDMG 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 173 VRFAIDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFwPQ 252
Cdd:PRK11359 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI-HC 770
|
250
....*....|....*.
gi 695771011 253 SYAQGWYYSRALPLEE 268
Cdd:PRK11359 771 RVIQGYFFSRPLPAEE 786
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| YjcC |
COG4943 |
Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal ... |
1-268 |
1.15e-93 |
|
Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal transduction mechanisms];
Pssm-ID: 443970 [Multi-domain] Cd Length: 528 Bit Score: 286.04 E-value: 1.15e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 1 MLLVTVSLL-SGLMIYILIMNRAELNSsLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFI 79
Cdd:COG4943 245 LLLLPLGLLlSLLLGLLVLRLLRRRLS-PRRRLRRAIKRREFYVHYQPIVDLKTGRCVGAEALVRWRDPDGSVISPDIFI 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 80 PLSEREGLQEDVTLFVINHAIREFIHTAIQN-EIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQGGDF 158
Cdd:COG4943 324 PLAEQSGLISPLTRQVIEQVFRDLGDLLAADpDFHISINLSASDLLSPRFLDDLERLLARTGVAPQQIVLEITERGFIDP 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 159 EGMKIHIDKYKNHGVRFAIDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVE 238
Cdd:COG4943 404 AKARAVIAALREAGHRIAIDDFGTGYSSLSYLQTLPVDILKIDKSFVDAIGTDSANSAVVPHIIEMAKTLNLDVVAEGVE 483
|
250 260 270
....*....|....*....|....*....|
gi 695771011 239 TQEQVNYLKTFWPQsYAQGWYYSRALPLEE 268
Cdd:COG4943 484 TEEQADYLRARGVQ-YGQGWLFAKPLPAEE 512
|
|
| EAL |
cd01948 |
EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL ... |
30-268 |
1.50e-74 |
|
EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Pssm-ID: 238923 [Multi-domain] Cd Length: 240 Bit Score: 227.43 E-value: 1.50e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 30 ARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFI-HTAI 108
Cdd:cd01948 1 ADLRRALERGEFELYYQPIVDLRTGRIVGYEALLRWRHPEGGLISPAEFIPLAEETGLIVELGRWVLEEACRQLArWQAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 109 QNEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQ-GGDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNL 187
Cdd:cd01948 81 GPDLRLSVNLSARQLRDPDFLDRLLELLAETGLPPRRLVLEITESAlIDDLEEALATLRRLRALGVRIALDDFGTGYSSL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 188 NLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTfWPQSYAQGWYYSRALPLE 267
Cdd:cd01948 161 SYLKRLPVDYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGLKVVAEGVETEEQLELLRE-LGCDYVQGYLFSRPLPAE 239
|
.
gi 695771011 268 E 268
Cdd:cd01948 240 E 240
|
|
| EAL |
COG2200 |
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) ... |
19-272 |
3.42e-70 |
|
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) [Signal transduction mechanisms];
Pssm-ID: 441802 [Multi-domain] Cd Length: 576 Bit Score: 226.59 E-value: 3.42e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 19 MNRAELNSSLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINH 98
Cdd:COG2200 320 EARARRRLALESELREALEEGELRLYYQPIVDLRTGRVVGYEALLRWRHPDGGLISPAEFIPAAERSGLIVELDRWVLER 399
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 99 AIREFIHTAIQN-EIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQG-GDFEGMKIHIDKYKNHGVRFA 176
Cdd:COG2200 400 ALRQLARWPERGlDLRLSVNLSARSLLDPDFLERLLELLAEYGLPPERLVLEITESALlEDLEAAIELLARLRALGVRIA 479
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 177 IDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKtfwpQS--- 253
Cdd:COG2200 480 LDDFGTGYSSLSYLKRLPPDYLKIDRSFVRDIARDPRDQAIVRAIVALAHRLGLKVVAEGVETEEQLEALR----ELgcd 555
|
250
....*....|....*....
gi 695771011 254 YAQGWYYSRALPLEEARKL 272
Cdd:COG2200 556 YAQGYLFGRPLPLEELEAL 574
|
|
| EAL |
smart00052 |
Putative diguanylate phosphodiesterase; Putative diguanylate phosphodiesterase, present in a ... |
34-268 |
9.85e-69 |
|
Putative diguanylate phosphodiesterase; Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Pssm-ID: 214491 [Multi-domain] Cd Length: 242 Bit Score: 212.85 E-value: 9.85e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 34 KALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHA---IREFIHTAIQN 110
Cdd:smart00052 6 QALENGQFLLYYQPIVSLRTGRLVGVEALIRWQHPEGGIISPDEFIPLAEETGLIVPLGRWVLEQAcqqLAEWQAQGPPP 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 111 eIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQG-GDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNLNL 189
Cdd:smart00052 86 -LLISINLSARQLISPDLVPRVLELLEETGLPPQRLELEITESVLlDDDESAVATLQRLRELGVRIALDDFGTGYSSLSY 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 695771011 190 VAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFWPQsYAQGWYYSRALPLEE 268
Cdd:smart00052 165 LKRLPVDLLKIDKSFVRDLQTDPEDEAIVQSIIELAQKLGLQVVAEGVETPEQLDLLRSLGCD-YGQGYLFSRPLPLDD 242
|
|
| COG5001 |
COG5001 |
Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain ... |
19-272 |
6.36e-61 |
|
Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms];
Pssm-ID: 444025 [Multi-domain] Cd Length: 678 Bit Score: 204.24 E-value: 6.36e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 19 MN-RAELNSSLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVIN 97
Cdd:COG5001 416 MDeRARERLELEADLRRALERGELELHYQPQVDLATGRIVGAEALLRWQHPERGLVSPAEFIPLAEETGLIVPLGEWVLR 495
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 98 HAIREF--IHTAIQNEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQG-GDFEGMKIHIDKYKNHGVR 174
Cdd:COG5001 496 EACRQLaaWQDAGLPDLRVAVNLSARQLRDPDLVDRVRRALAETGLPPSRLELEITESALlEDPEEALETLRALRALGVR 575
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 175 FAIDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTEslrydllPGLHEMFRSIAD-------KIVFEGVETQEQVNYLK 247
Cdd:COG5001 576 IALDDFGTGYSSLSYLKRLPVDTLKIDRSFVRDLAED-------PDDAAIVRAIIAlahslglEVVAEGVETEEQLEFLR 648
|
250 260
....*....|....*....|....*
gi 695771011 248 TFWPQsYAQGWYYSRALPLEEARKL 272
Cdd:COG5001 649 ELGCD-YAQGYLFSRPLPAEELEAL 672
|
|
| EAL |
pfam00563 |
EAL domain; This domain is found in diverse bacterial signaling proteins. It is called EAL ... |
30-263 |
1.65e-59 |
|
EAL domain; This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.
Pssm-ID: 425752 [Multi-domain] Cd Length: 235 Bit Score: 189.07 E-value: 1.65e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 30 ARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFIHTAIQ 109
Cdd:pfam00563 2 RALRRALENGEFVLYYQPIVDLRTGRVVGYEALLRWQHPDGGLISPARFLPLAEELGLIAELDRWVLEQALADLAQLQLG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 110 NEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQG-GDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNLN 188
Cdd:pfam00563 82 PDIKLSINLSPASLADPGFLELLRALLKQAGPPPSRLVLEITESDLlARLEALREVLKRLRALGIRIALDDFGTGYSSLS 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 695771011 189 LVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTfWPQSYAQGWYYSRA 263
Cdd:pfam00563 162 YLLRLPPDFVKIDRSLIADIDKDGEARAIVRALIALAHSLGIKVVAEGVETEEQLEALRE-LGCDLVQGYYFSKP 235
|
|
| PRK11359 |
PRK11359 |
cyclic-di-GMP phosphodiesterase; Provisional |
22-268 |
1.72e-39 |
|
cyclic-di-GMP phosphodiesterase; Provisional
Pssm-ID: 183097 [Multi-domain] Cd Length: 799 Bit Score: 146.07 E-value: 1.72e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 22 AELNSSLSARFV------KALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFV 95
Cdd:PRK11359 532 PAMNEMVKERLVlgaalkEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 96 INHAIREFI--HTAIQNEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERQGGDF-EGMKIHIDKYKNHG 172
Cdd:PRK11359 612 IAEACRQLAewRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMQAWGIDGHQLTVEITESMMMEHdTEIFKRIQILRDMG 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 173 VRFAIDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFwPQ 252
Cdd:PRK11359 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI-HC 770
|
250
....*....|....*.
gi 695771011 253 SYAQGWYYSRALPLEE 268
Cdd:PRK11359 771 RVIQGYFFSRPLPAEE 786
|
|
| PRK10551 |
PRK10551 |
cyclic di-GMP phosphodiesterase; |
8-268 |
1.07e-37 |
|
cyclic di-GMP phosphodiesterase;
Pssm-ID: 182541 [Multi-domain] Cd Length: 518 Bit Score: 138.97 E-value: 1.07e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 8 LLSGLMIYILIMNRAELNSSLSAR----FVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSE 83
Cdd:PRK10551 240 LLLGLLSGILVGLLCYYLLSLRMRpgkeILTGIKRGQFYVEYQPVVDTQTLRVTGLEALLRWRHPTAGEIPPDAFINYAE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 84 REGLQEDVT--LFVI----NHAIREFIHTAIQneifLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITERqggd 157
Cdd:PRK10551 320 AQKLIVPLTqhLFELiardAAELQKVLPVGAK----LGINISPAHLHSDSFKADVQRLLASLPADHFQIVLEITER---- 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 158 feGMkihIDKYK---------NHGVRFAIDDFGTGYSNLNLVAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSI 228
Cdd:PRK10551 392 --DM---VQEEEatklfawlhSQGIEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIQAIGTETVTSPVLDAVLTLAKRL 466
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 695771011 229 ADKIVFEGVETQEQVNYLKTFwPQSYAQGWYYSRALPLEE 268
Cdd:PRK10551 467 NMLTVAEGVETPEQARWLRER-GVNFLQGYWISRPLPLED 505
|
|
| PRK11829 |
PRK11829 |
biofilm formation regulator HmsP; Provisional |
33-268 |
2.69e-32 |
|
biofilm formation regulator HmsP; Provisional
Pssm-ID: 183329 [Multi-domain] Cd Length: 660 Bit Score: 125.05 E-value: 2.69e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 33 VKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFIHTAIQN-E 111
Cdd:PRK11829 411 LQAIENHDFTLFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGFVHFAEEEGMMVPLGNWVLEEACRILADWKARGvS 490
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 112 IFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITER-QGGDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNLNLV 190
Cdd:PRK11829 491 LPLSVNISGLQVQNKQFLPHLKTLISHYHIDPQQLLLEITETaQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYL 570
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 191 ---AALDVDEIKIDKSLTSAIGTESlrydllpGLHEMFRSIAD----KIVFEGVETQEQVNYLKTFWPQsYAQGWYYSRA 263
Cdd:PRK11829 571 nhlKSLPIHMIKLDKSFVKNLPEDD-------AIARIISCVSDvlkvRVMAEGVETEEQRQWLLEHGIQ-CGQGFLFSPP 642
|
....*
gi 695771011 264 LPLEE 268
Cdd:PRK11829 643 LPRAE 647
|
|
| PRK13561 |
PRK13561 |
putative diguanylate cyclase; Provisional |
19-273 |
6.87e-31 |
|
putative diguanylate cyclase; Provisional
Pssm-ID: 184143 [Multi-domain] Cd Length: 651 Bit Score: 120.97 E-value: 6.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 19 MNRAELNSSLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINH 98
Cdd:PRK13561 392 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMRSGKLVSAEALLRMQQPDGSWDLPEGLIDRIESCGLMVTVGHWVLEE 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 99 AIREFIHTAIQN-EIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITE-RQGGDFEGMKIHIDKYKNHGVRFA 176
Cdd:PRK13561 472 SCRLLAAWQERGiMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTEsRRIDDPHAAVAILRPLRNAGVRVA 551
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 177 IDDFGTGYSNLNLV---AALDVDEIKIDKSLTSAIGTESlryDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFwPQS 253
Cdd:PRK13561 552 LDDFGMGYAGLRQLqhmKSLPIDVLKIDKMFVDGLPEDD---SMVAAIIMLAQSLNLQVIAEGVETEAQRDWLLKA-GVG 627
|
250 260
....*....|....*....|..
gi 695771011 254 YAQGWYYSRALPLE--EARKLT 273
Cdd:PRK13561 628 IAQGFLFARALPIEifEERYLE 649
|
|
| PRK10060 |
PRK10060 |
cyclic di-GMP phosphodiesterase; |
34-275 |
2.01e-22 |
|
cyclic di-GMP phosphodiesterase;
Pssm-ID: 236645 [Multi-domain] Cd Length: 663 Bit Score: 96.67 E-value: 2.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 34 KALKNEALSLVYQPIYRIeDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFIHTAIQNeIF 113
Cdd:PRK10060 415 KALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVVRQVAKWRDKG-IN 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 114 LSVNINPSD---LDSEKFRDkLLGLISEYNIPYKTILLEITERQGGDFEGMKIH-IDKYKNHGVRFAIDDFGTGYSNLNL 189
Cdd:PRK10060 493 LRVAVNVSArqlADQTIFTA-LKQALQELNFEYCPIDVELTESCLIENEELALSvIQQFSQLGAQVHLDDFGTGYSSLSQ 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 190 VAALDVDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFwPQSYAQGWYYSRALP---- 265
Cdd:PRK10060 572 LARFPIDAIKLDQSFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVETAKEDAFLTKN-GVNERQGFLFAKPMPavaf 650
|
250
....*....|...
gi 695771011 266 ---LEEARKLTIR 275
Cdd:PRK10060 651 erwYKRYLKRKLI 663
|
|
| PRK11596 |
PRK11596 |
cyclic-di-GMP phosphodiesterase; Provisional |
45-275 |
2.51e-11 |
|
cyclic-di-GMP phosphodiesterase; Provisional
Pssm-ID: 183222 [Multi-domain] Cd Length: 255 Bit Score: 62.33 E-value: 2.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 45 YQPIYRIeDGQICGFEAL--LRWKDERLGNISPEVF---IPLSER-EGLQEDVTLFVINHAIreFIHtaiqNEIFLSVNI 118
Cdd:PRK11596 34 FQPIYRT-SGRLMAIELLtaVTHPSNPSQRLSPERYfaeITVSHRlDVVKEQLDLLAQWADF--FVR----HGLLASVNI 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 119 NPSDLDSEKFRDKLLGLISEynIPYktILLEITERQGGDFEGMKIHIDKYknhgVRFAIDDFGTGYSNLNLVAALDVDEI 198
Cdd:PRK11596 107 DGPTLIALRQQPAILRLIER--LPW--LRFELVEHIRLPKDSPFASMCEF----GPLWLDDFGTGMANFSALSEVRYDYI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 199 KIDKSL-----TSAIGTeslryDLLPGLHEMFRSIADKIVFEGVETQEQvnylktfW------PQSYAQGWYYSRALPLE 267
Cdd:PRK11596 179 KVARELfimlrQSEEGR-----NLFSQLLHLMNRYCRGVIVEGVETPEE-------WrdvqrsPAFAAQGYFLSRPAPFE 246
|
....*...
gi 695771011 268 EARKLTIR 275
Cdd:PRK11596 247 TLETLPLA 254
|
|
| PRK09776 |
PRK09776 |
putative diguanylate cyclase; Provisional |
27-204 |
4.39e-11 |
|
putative diguanylate cyclase; Provisional
Pssm-ID: 182070 [Multi-domain] Cd Length: 1092 Bit Score: 63.15 E-value: 4.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 27 SLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISPEVFIPLSEREGLQEDVTLFVINHAIREFIHT 106
Cdd:PRK09776 841 SLAEQWRMIKENQLMMLAHGVASPRIPEARNHWLISLRLWDPEGEIIDEGAFRPAAEDPALMHALDRRVIHEFFRQAAKA 920
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 107 AIQNEIFLSVNINPSDLDSEKFRDKLLGLISEYNIPYKTILLEITER--QGGDFEGMKIhIDKYKNHGVRFAIDDFGTGY 184
Cdd:PRK09776 921 VASKGLSIALPLSVAGLSSPTLLPFLLEQLENSPLPPRLLHLEITETalLNHAESASRL-VQKLRLAGCRVVLSDFGRGL 999
|
170 180
....*....|....*....|
gi 695771011 185 SNLNLVAALDVDEIKIDKSL 204
Cdd:PRK09776 1000 SSFNYLKAFMADYLKLDGEL 1019
|
|
| YuxH |
COG3434 |
c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains [Signal transduction ... |
46-273 |
1.27e-03 |
|
c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains [Signal transduction mechanisms];
Pssm-ID: 442660 [Multi-domain] Cd Length: 407 Bit Score: 39.79 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 46 QPIYRiEDGQICGFEALLRwkdERLGNISPEVfiplserEGLQEDVTlfVINHAIREF-IHTAIQNEIFLsVNINPSDLD 124
Cdd:COG3434 9 QPILD-RDQRVVGYELLFR---SGLENSAPDV-------DGDQATAR--VLLNAFLEIgLDRLLGGKLAF-INFTEELLL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695771011 125 SEKFRDkllgliseynIPYKTILLEITERQGGDFEGMKIhIDKYKNHGVRFAIDDFGTGYSNLNLVAALDVdeIKIDksl 204
Cdd:COG3434 75 SDLPEL----------LPPERVVLEILEDVEPDEELLEA-LKELKEKGYRIALDDFVLDPEWDPLLPLADI--IKID--- 138
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 695771011 205 TSAIGTESLRyDLLPGLHEmfRSIadKIVFEGVETQEQVNYLKT--FwpqSYAQGWYYSRALPLeEARKLT 273
Cdd:COG3434 139 VLALDLEELA-ELVARLKR--YGI--KLLAEKVETREEFELCKElgF---DLFQGYFFSKPEIL-KGKKLP 200
|
|
| |
