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Concise Results
Standard Results
Full Results
APC family permease [Raoultella planticola]
Protein Classification
APC family permease ( domain architecture ID 11425014 )
APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton
List of domain hits
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-456
1.30e-46
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 167.77
E-value: 1.30e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 4 K R LAGHLERGVV G FPTTL A SS VG L I MASPVILTVTSGF G MG G DTFA LA V L L A FIMMQAQVTTF AE A A TLI P TT G SV Y D Y I 83
Cdd:COG0531 2 S R GESSELKRKL G LFDLV A LG VG A I IGAGIFVLPGLAA G LA G PAAI LA W L I A GLLALLVALSY AE L A SAF P RA G GA Y T Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 84 ACGM G RFFAITGAL c A Y L IVHIF A GT A ETILA G VMALVN F ESIS S QMA A hqntwmvg VGMVVVFG LLN AI GV EIFG KV EV 163
Cdd:COG0531 82 RRAL G PLLGFLAGW - A L L LSYVL A VA A VAVAF G GYLSSL F PAGG S VLI A -------- LVLILLLT LLN LR GV KESA KV NN 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 164 V LT FGMWST L TI F GLC G I F MAPVTHLSGWFGTP lnv SD LSG LFGYIGM A M F M F V G C E LVTPM A P E I K QAH R T IPRA M alg 243
Cdd:COG0531 153 I LT VLKLLV L LL F IVV G L F AFDPANFTPFLPAG --- GG LSG VLAALAL A F F A F T G F E AIANL A E E A K NPK R N IPRA I --- 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 244 L L GVASCMFI Y GAAIN rqven VMLDAANNVH L LDTPMAIPAF AE R V M G HA G QYWLGV G L LL AGCATI N TLMAAVP R II Y G 323
Cdd:COG0531 227 I L SLLIVGVL Y ILVSL ----- ALTGVVPYDE L AASGAPLADA AE A V F G PW G AILIAL G A LL SLLGAL N ASILGAS R LL Y A 301
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 324 MA L DG A LP RFLTWL HPRF K TPV I AI AIGVA I PC L HAWYLNGNIDRIVP L ila A VCAWGV AYLLV T L S V VL LR I RRPDLPR 403
Cdd:COG0531 302 MA R DG L LP KVFAKV HPRF G TPV N AI LLTGV I AL L LLLLGAASFTALAS L --- A SVGVLL AYLLV A L A V IV LR R RRPDLPR 378
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 695766026 404 AY R S P w F PL PQ I ISSVGIIIAIINIT P pgmdsr EV L VPFGIM L GLTAAYA L FW 456
Cdd:COG0531 379 PF R V P - L PL IP I LGILLCLFLLYLLG P ------ GA L LIGLVL L AIGLLLY L LY 424
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-456
1.30e-46
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 167.77
E-value: 1.30e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 4 K R LAGHLERGVV G FPTTL A SS VG L I MASPVILTVTSGF G MG G DTFA LA V L L A FIMMQAQVTTF AE A A TLI P TT G SV Y D Y I 83
Cdd:COG0531 2 S R GESSELKRKL G LFDLV A LG VG A I IGAGIFVLPGLAA G LA G PAAI LA W L I A GLLALLVALSY AE L A SAF P RA G GA Y T Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 84 ACGM G RFFAITGAL c A Y L IVHIF A GT A ETILA G VMALVN F ESIS S QMA A hqntwmvg VGMVVVFG LLN AI GV EIFG KV EV 163
Cdd:COG0531 82 RRAL G PLLGFLAGW - A L L LSYVL A VA A VAVAF G GYLSSL F PAGG S VLI A -------- LVLILLLT LLN LR GV KESA KV NN 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 164 V LT FGMWST L TI F GLC G I F MAPVTHLSGWFGTP lnv SD LSG LFGYIGM A M F M F V G C E LVTPM A P E I K QAH R T IPRA M alg 243
Cdd:COG0531 153 I LT VLKLLV L LL F IVV G L F AFDPANFTPFLPAG --- GG LSG VLAALAL A F F A F T G F E AIANL A E E A K NPK R N IPRA I --- 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 244 L L GVASCMFI Y GAAIN rqven VMLDAANNVH L LDTPMAIPAF AE R V M G HA G QYWLGV G L LL AGCATI N TLMAAVP R II Y G 323
Cdd:COG0531 227 I L SLLIVGVL Y ILVSL ----- ALTGVVPYDE L AASGAPLADA AE A V F G PW G AILIAL G A LL SLLGAL N ASILGAS R LL Y A 301
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 324 MA L DG A LP RFLTWL HPRF K TPV I AI AIGVA I PC L HAWYLNGNIDRIVP L ila A VCAWGV AYLLV T L S V VL LR I RRPDLPR 403
Cdd:COG0531 302 MA R DG L LP KVFAKV HPRF G TPV N AI LLTGV I AL L LLLLGAASFTALAS L --- A SVGVLL AYLLV A L A V IV LR R RRPDLPR 378
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 695766026 404 AY R S P w F PL PQ I ISSVGIIIAIINIT P pgmdsr EV L VPFGIM L GLTAAYA L FW 456
Cdd:COG0531 379 PF R V P - L PL IP I LGILLCLFLLYLLG P ------ GA L LIGLVL L AIGLLLY L LY 424
AA_permease_2
pfam13520 Amino acid permease;
16-409
2.40e-16
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 81.20
E-value: 2.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 16 G FPTTL A SSV G LIMA S PVI lt V TSGFGM GG DTFALAVLL A - F I MMQ A QVTTF AE AATLI P TT G SV Y D Y IACGM G R F F A IT 94
Cdd:pfam13520 2 G LLSAF A LVI G SVIG S GIF -- V APLVAS GG PALIVWGWI A a I I FSL A VGLVY AE LSSAL P RS G GI Y V Y LENAF G K F V A FL 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 95 GALCAYLIVHIFAGTAETIL A GVMALVNFESIS sqm AAHQN T WMVGVGMVVV F GLL N AI GV EIFG K VEVV L T - FGMWST L 173
Cdd:pfam13520 80 AGWSNWFAYVLGLASSASVA A SYLLSALGPDLV --- PTTWL T YGIAIAILII F AII N IR GV RESA K IQNI L G i LKLLLP L 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 174 TIFGLC G IFM A -- PVTH L SGWFGTPLNVSDLS G L F GYIGMAMFM F V G C E LVTPMAP E I K Q ah R TI P R A MAL G LLG V ASCM 251
Cdd:pfam13520 157 ILIIIL G LVT A dg GGFN L LSGEWHTFFPDGWP G V F AGFLGVLWS F T G F E SAANVSE E V K K -- R NV P K A IFI G VII V GVLY 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 252 FIYGA A INRQ V ENVMLDAANNVH lld TPM A I pa FAER V M G HA G QYWLGVG L L L AGCATI NT LMAAVP R II Y GM A L DG A LP 331
Cdd:pfam13520 235 ILVNI A FFGV V PDDEIALSSGLG --- QVA A L -- LFQA V G G KW G AIIVVIL L A L SLLGAV NT AIVGAS R LL Y AL A R DG V LP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 332 RFLTWLHP - R F KT P VI AI --- AI GVA I PC L HAWYLNGNIDRIVP L ila AVCAWGVA YLL VTLSVVL LR IR RPDL P R AYRS 407
Cdd:pfam13520 310 FSRFFAKV n K F GS P IR AI ilt AI LSL I LL L LFLLSPAAYNALLS L --- SAYGYLLS YLL PIIGLLI LR KK RPDL G R IPGR 386
..
gi 695766026 408 PW 409
Cdd:pfam13520 387 WP 388
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
66-359
2.16e-10
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 62.91
E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 66 F AE AATLI P TT GS V Y D Y IACGM G RFF A - ITG -- ALCA Y L I ----- VHIFAGTAETI L A --- G VMALVN F ESISSQM A AHQ 134
Cdd:TIGR00906 82 Y AE FGARV P KA GS A Y L Y SYVTV G ELW A f ITG wn LILE Y V I gtaav ARSWSAYFDEL L N kqi G QFRRTY F KLNYDGL A EYP 161
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 135 N tw MVG V GMVVVFGL L NAI GV EIFGK V EVVL T FGMWST L TIFGLC G IFM A P V THL S GWFG ------ T P LNVS dls G LFGY 208
Cdd:TIGR00906 162 D -- FFA V CLILLLAV L LSF GV KESAW V NKIF T AINILV L LFVIIA G FTK A D V ANW S ITEE kgaggf M P YGFT --- G VLSG 236
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 209 IGMAM F M F V G CELVTPMAP E I K QAH R T IP RAMALG LL GVASCM F IYG AA IN rqven V M LD aann VH LLD TPMAI P AFA E R 288
Cdd:TIGR00906 237 AATCF F A F I G FDAIATTGE E V K NPQ R A IP IGIVTS LL VCFVAY F LMS AA LT ----- L M MP ---- YY LLD PDAPF P VAF E Y 307
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 695766026 289 V MGHAGQ Y WLG VG L L LAGCATINTL M AAV PR I IY G MA L DG A L PRF L TWLHPRF KTP VI A IAIGV AI PC L H A 359
Cdd:TIGR00906 308 V GWDPAK Y IVA VG A L CGMSTSLLGG M FPL PR V IY A MA R DG L L FKW L AQINSKT KTP IN A TVVSG AI AA L M A 378
PRK11021
PRK11021 putative transporter; Provisional
149-357
5.60e-04
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 42.20
E-value: 5.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 149 LLN AI G VEIFGKVEV V LTFGMWS - TLT I FGLCG I FM A PVTHLS gwfgtp LNVSDL SGLF GYI G MAMFM FVG C E LVTPM A P 227
Cdd:PRK11021 128 LLN LR G ASSSANLQT V IALLIVA l VVA I WWAGD I KP A DIPFPA ------ PGSIEW SGLF AAL G VMFWC FVG I E AFAHL A S 201
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 228 E I K QAH R TI PRA MAL GLL GVAS ---- C MFI --- YG A AINR Q VENV mldaannvhlldtpm AI P AFAERVM G HAGQYWLG V 300
Cdd:PRK11021 202 E F K NPE R DF PRA LMI GLL LAGL vywa C TVV vlh FP A YGDK Q AAAA --------------- SL P GIFVQLF G GYALWVIC V 266
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 695766026 301 GLL LA GC A TI N TLMAAVP R IIYGM A LD G AL P RF L TW L HP R f KT PV I A IAIGVAIPCL 357
Cdd:PRK11021 267 IGY LA CF A SV N IYTQSFA R LVWSQ A RE G RP P SY L AR L SA R - GV PV N A LNAVLGCCAV 322
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-456
1.30e-46
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 167.77
E-value: 1.30e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 4 K R LAGHLERGVV G FPTTL A SS VG L I MASPVILTVTSGF G MG G DTFA LA V L L A FIMMQAQVTTF AE A A TLI P TT G SV Y D Y I 83
Cdd:COG0531 2 S R GESSELKRKL G LFDLV A LG VG A I IGAGIFVLPGLAA G LA G PAAI LA W L I A GLLALLVALSY AE L A SAF P RA G GA Y T Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 84 ACGM G RFFAITGAL c A Y L IVHIF A GT A ETILA G VMALVN F ESIS S QMA A hqntwmvg VGMVVVFG LLN AI GV EIFG KV EV 163
Cdd:COG0531 82 RRAL G PLLGFLAGW - A L L LSYVL A VA A VAVAF G GYLSSL F PAGG S VLI A -------- LVLILLLT LLN LR GV KESA KV NN 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 164 V LT FGMWST L TI F GLC G I F MAPVTHLSGWFGTP lnv SD LSG LFGYIGM A M F M F V G C E LVTPM A P E I K QAH R T IPRA M alg 243
Cdd:COG0531 153 I LT VLKLLV L LL F IVV G L F AFDPANFTPFLPAG --- GG LSG VLAALAL A F F A F T G F E AIANL A E E A K NPK R N IPRA I --- 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 244 L L GVASCMFI Y GAAIN rqven VMLDAANNVH L LDTPMAIPAF AE R V M G HA G QYWLGV G L LL AGCATI N TLMAAVP R II Y G 323
Cdd:COG0531 227 I L SLLIVGVL Y ILVSL ----- ALTGVVPYDE L AASGAPLADA AE A V F G PW G AILIAL G A LL SLLGAL N ASILGAS R LL Y A 301
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 324 MA L DG A LP RFLTWL HPRF K TPV I AI AIGVA I PC L HAWYLNGNIDRIVP L ila A VCAWGV AYLLV T L S V VL LR I RRPDLPR 403
Cdd:COG0531 302 MA R DG L LP KVFAKV HPRF G TPV N AI LLTGV I AL L LLLLGAASFTALAS L --- A SVGVLL AYLLV A L A V IV LR R RRPDLPR 378
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 695766026 404 AY R S P w F PL PQ I ISSVGIIIAIINIT P pgmdsr EV L VPFGIM L GLTAAYA L FW 456
Cdd:COG0531 379 PF R V P - L PL IP I LGILLCLFLLYLLG P ------ GA L LIGLVL L AIGLLLY L LY 424
AA_permease_2
pfam13520 Amino acid permease;
16-409
2.40e-16
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 81.20
E-value: 2.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 16 G FPTTL A SSV G LIMA S PVI lt V TSGFGM GG DTFALAVLL A - F I MMQ A QVTTF AE AATLI P TT G SV Y D Y IACGM G R F F A IT 94
Cdd:pfam13520 2 G LLSAF A LVI G SVIG S GIF -- V APLVAS GG PALIVWGWI A a I I FSL A VGLVY AE LSSAL P RS G GI Y V Y LENAF G K F V A FL 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 95 GALCAYLIVHIFAGTAETIL A GVMALVNFESIS sqm AAHQN T WMVGVGMVVV F GLL N AI GV EIFG K VEVV L T - FGMWST L 173
Cdd:pfam13520 80 AGWSNWFAYVLGLASSASVA A SYLLSALGPDLV --- PTTWL T YGIAIAILII F AII N IR GV RESA K IQNI L G i LKLLLP L 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 174 TIFGLC G IFM A -- PVTH L SGWFGTPLNVSDLS G L F GYIGMAMFM F V G C E LVTPMAP E I K Q ah R TI P R A MAL G LLG V ASCM 251
Cdd:pfam13520 157 ILIIIL G LVT A dg GGFN L LSGEWHTFFPDGWP G V F AGFLGVLWS F T G F E SAANVSE E V K K -- R NV P K A IFI G VII V GVLY 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 252 FIYGA A INRQ V ENVMLDAANNVH lld TPM A I pa FAER V M G HA G QYWLGVG L L L AGCATI NT LMAAVP R II Y GM A L DG A LP 331
Cdd:pfam13520 235 ILVNI A FFGV V PDDEIALSSGLG --- QVA A L -- LFQA V G G KW G AIIVVIL L A L SLLGAV NT AIVGAS R LL Y AL A R DG V LP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 332 RFLTWLHP - R F KT P VI AI --- AI GVA I PC L HAWYLNGNIDRIVP L ila AVCAWGVA YLL VTLSVVL LR IR RPDL P R AYRS 407
Cdd:pfam13520 310 FSRFFAKV n K F GS P IR AI ilt AI LSL I LL L LFLLSPAAYNALLS L --- SAYGYLLS YLL PIIGLLI LR KK RPDL G R IPGR 386
..
gi 695766026 408 PW 409
Cdd:pfam13520 387 WP 388
AA_permease
pfam00324 Amino acid permease;
24-357
1.38e-11
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 66.57
E-value: 1.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 24 SV GL IMA S PVI L tvtsg FGM G GDTFA L AV L LAFIMMQAQVTTFA E AA T LI P TT G SV Y D Y IACGM G RFFAITGAL c A Y LIV 103
Cdd:pfam00324 12 GT GL FVG S GSV L ----- GQA G PAGAL L GY L ISGVVIFLVMLSLG E IS T NG P VS G GF Y T Y ASRFL G PSLGFATGW - N Y WLS 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 104 H I FAGTA E ti L AGVMA L VN F ESISSQMAA hqn T W MV G VGMV V VFGLL N AI GV EIF G KV E V ------ VLTFGMWSTLT I FG 177
Cdd:pfam00324 86 W I TVLAL E -- L TAASI L IQ F WELVPDIPY --- L W VW G AVFL V LLTII N LV GV KWY G EA E F wfalik IIAIIGFIIVG I IL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 178 L C G IFMAPVTHLSGWF -- G TPL N VSD -- LS G LFGYIGM A M F M F V G C ELV TPM A P E I K QAHRT IP R A MA ----- LGLLGVA 248
Cdd:pfam00324 161 L S G GNPNDGAIFRYLG dn G GKN N FPP gf GK G FISVFVI A F F A F T G I ELV GIA A G E V K NPEKS IP K A IL qviwr ITIFYIL 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 249 S C m FIY G AAINRQVENVML D A A NNVHLL dtpma IPA F AERVMGHAGQY w LGVGL L L A GCATI N TLMAAVP R II Y GM A L DG 328
Cdd:pfam00324 241 S L - LAI G LLVPWNDPGLLN D S A SAASPF ----- VIF F KFLGISGLAPL - INAVI L T A ALSAA N SSLYSGS R ML Y SL A R DG 313
330 340
....*....|....*....|....*....
gi 695766026 329 AL P R FL TW l HPRFKT P VI AI AIGVA I PC L 357
Cdd:pfam00324 314 LA P K FL KK - VDKRGV P LR AI LVSMV I SL L 341
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
66-359
2.16e-10
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 62.91
E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 66 F AE AATLI P TT GS V Y D Y IACGM G RFF A - ITG -- ALCA Y L I ----- VHIFAGTAETI L A --- G VMALVN F ESISSQM A AHQ 134
Cdd:TIGR00906 82 Y AE FGARV P KA GS A Y L Y SYVTV G ELW A f ITG wn LILE Y V I gtaav ARSWSAYFDEL L N kqi G QFRRTY F KLNYDGL A EYP 161
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 135 N tw MVG V GMVVVFGL L NAI GV EIFGK V EVVL T FGMWST L TIFGLC G IFM A P V THL S GWFG ------ T P LNVS dls G LFGY 208
Cdd:TIGR00906 162 D -- FFA V CLILLLAV L LSF GV KESAW V NKIF T AINILV L LFVIIA G FTK A D V ANW S ITEE kgaggf M P YGFT --- G VLSG 236
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 209 IGMAM F M F V G CELVTPMAP E I K QAH R T IP RAMALG LL GVASCM F IYG AA IN rqven V M LD aann VH LLD TPMAI P AFA E R 288
Cdd:TIGR00906 237 AATCF F A F I G FDAIATTGE E V K NPQ R A IP IGIVTS LL VCFVAY F LMS AA LT ----- L M MP ---- YY LLD PDAPF P VAF E Y 307
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 695766026 289 V MGHAGQ Y WLG VG L L LAGCATINTL M AAV PR I IY G MA L DG A L PRF L TWLHPRF KTP VI A IAIGV AI PC L H A 359
Cdd:TIGR00906 308 V GWDPAK Y IVA VG A L CGMSTSLLGG M FPL PR V IY A MA R DG L L FKW L AQINSKT KTP IN A TVVSG AI AA L M A 378
AnsP
COG1113 L-asparagine transporter or related permease [Amino acid transport and metabolism];
47-354
2.11e-08
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain]
Cd Length: 458
Bit Score: 56.28
E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 47 TFAL A V L LA F IM M Q A qvtt FA E A A TLI P TT GS VY DY IACGM G RFFA - I TG A L ca Y LIVHIFA G T AE TILA G VMALVN F ES 125
Cdd:COG1113 53 SYLI A G L IV F LV M R A ---- LG E M A VAN P VS GS FS DY AREYL G PWAG f V TG W L -- Y WFFWVLV G M AE ATAV G IYLQFW F PD 126
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 126 IS sqmaahqn T W MVGVGMV V VFGLL N AIG V EI FG KV E VVLTFGMWSTLTI F GLC G IFMA p VTHLSGWF G T P LNV S D L --- 202
Cdd:COG1113 127 VP -------- Q W VWALVFL V LLTAI N LLS V KL FG EF E FWFALIKVVAIVA F IVV G LLLI - FFGFGLPG G P P AGL S N L wdh 197
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 203 -------- S G LFGYIGMAM F M F V G C ELV TPM A P E I K QAHR TIP R A M ----- ALG L LG V A S CMF I ygaainrqven VM L DA 269
Cdd:COG1113 198 ggffpngi G G VLAALQIVV F A F G G I ELV GIA A A E A K DPEK TIP K A I nsviw RIL L FY V G S LFV I ----------- LA L VP 266
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 270 A N NVHLLDT P MA ipafae R V MGHA G QYWLG ---- VGL L L A GCATI N TLMAAVP R II Y GM A LD G AL P R F LTW L HP R f KT PV 345
Cdd:COG1113 267 W N QIGAGGS P FV ------ T V FSLL G IPAAA gimn FVV L T A ALSSL N SGLYSTS R ML Y SL A ER G DA P K F FGK L SK R - GV PV 339
....*....
gi 695766026 346 I AI AIGVAI 354
Cdd:COG1113 340 R AI LLSAVV 348
LysP
COG0833 Amino acid permease [Amino acid transport and metabolism];
50-417
1.11e-04
Amino acid permease [Amino acid transport and metabolism];
Pssm-ID: 440595 [Multi-domain]
Cd Length: 467
Bit Score: 44.78
E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 50 LA V LL AFI M MQAQV T TFA E A A TLI P TT GS VYD Y -------- IACGM G RFFAITG A LCA ylivhifag T AE TIL AG VMALV 121
Cdd:COG0833 50 LA Y LL GGL M VYFLM T SLG E L A VAM P VS GS FQT Y atrfidpa FGFAV G WNYWLNW A ITV --------- A AE LTA AG IIMQY 120
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 122 N F ESISS qmaahqnt W MVGVGMVVVFG LLNA IG V EI FG --------- KV EV V LT F GMWST L T IFG LC G --- IFMAPV T HL 189
Cdd:COG0833 121 W F PDVPV -------- W IWSLLFLALIF LLNA LS V KA FG esefwfsli KV IT V IA F IIVGL L M IFG II G gha PGFSNF T TG 192
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 190 S G W F gtpln VSDLSGLF G YIGMAM F M F V G C EL VTPM A P E IKQAHR TIP R A MA ----- LG L LGVAS c M F IYG A A I NRQVEN 264
Cdd:COG0833 193 D G P F ----- PGGFLAIL G VMMIVG F S F Q G T EL IGIA A G E SENPEK TIP K A IR qvfwr IL L FYILA - I F VIA A L I PYTDAG 266
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 265 V M ldaannvhll DT P MAI pafaer V MGH AG qywlgvgll LAGC A T I ------------- N TLMA A VP R IIYGM A LD G AL P 331
Cdd:COG0833 267 V A ---------- ES P FTL ------ V FER AG --------- IPYA A D I mnaviltavlsag N SGLY A ST R MLWSL A KE G MA P 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 332 RFLTW L HP R f KT P VI A IAI -- G V AIPC L HAWYLN gni DRI V P L I L AAVCAWGVAYLLVTLSVVLL R I RR --------- P D 400
Cdd:COG0833 322 KIFAK L NK R - GV P LN A LLA tm A V GLLA L LSSFFG --- AGT V Y L W L LSISGLTGFIAWLGIAISHY R F RR ayvaqggdl E D 397
410
....*....|....*..
gi 695766026 401 L P ra Y RS P W FP LPQ I IS 417
Cdd:COG0833 398 L K -- Y KA P L FP FGP I FA 412
PRK11021
PRK11021 putative transporter; Provisional
149-357
5.60e-04
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 42.20
E-value: 5.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 149 LLN AI G VEIFGKVEV V LTFGMWS - TLT I FGLCG I FM A PVTHLS gwfgtp LNVSDL SGLF GYI G MAMFM FVG C E LVTPM A P 227
Cdd:PRK11021 128 LLN LR G ASSSANLQT V IALLIVA l VVA I WWAGD I KP A DIPFPA ------ PGSIEW SGLF AAL G VMFWC FVG I E AFAHL A S 201
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 228 E I K QAH R TI PRA MAL GLL GVAS ---- C MFI --- YG A AINR Q VENV mldaannvhlldtpm AI P AFAERVM G HAGQYWLG V 300
Cdd:PRK11021 202 E F K NPE R DF PRA LMI GLL LAGL vywa C TVV vlh FP A YGDK Q AAAA --------------- SL P GIFVQLF G GYALWVIC V 266
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 695766026 301 GLL LA GC A TI N TLMAAVP R IIYGM A LD G AL P RF L TW L HP R f KT PV I A IAIGVAIPCL 357
Cdd:PRK11021 267 IGY LA CF A SV N IYTQSFA R LVWSQ A RE G RP P SY L AR L SA R - GV PV N A LNAVLGCCAV 322
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
205-384
6.85e-04
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 42.04
E-value: 6.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 205 L F G YI g MAMFMFV G CELVTP MA P EI KQAHRTI PRA M -- A LGLLG V ASCM F IYGAAINRQVENVMLDAANNVHLLDT pmai 282
Cdd:TIGR00907 220 L L G LL - NPAWSMT G YDGTAH MA E EI ENPEVVG PRA I ig A VAIGI V TGFC F NIVLFFSMGDIDSLISSTTGQPIAQI ---- 294
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 283 pa F AERVMGH AG QYW L GVGL L LAGCATIN T L M A A VP R I IY GMAL DG A LP -- RFLTWLH PR FKT P VI A IAIGVAIPC L HAW 360
Cdd:TIGR00907 295 -- F YNALGNK AG AIF L LCLI L VTSFFCAI T C M T A NS R M IY AFSR DG G LP fs PLWSRVN PR TQV P LN A VWLSAVWII L IGL 372
170 180
....*....|....*....|....
gi 695766026 361 YLN G NIDRIVPLILAAVC A WG V A Y 384
Cdd:TIGR00907 373 LGL G SSTAFQAIFSVCTV A LD V S Y 396
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
66-410
1.81e-03
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 40.89
E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 66 F AE AA T L IP TT G SV Y D YI acgmgrf FAIT G A L C A Y L IVH I FAGTAETILAG V M AL VNFES I SSQMAAHQNTWMVGVGM V V 145
Cdd:TIGR00911 97 Y AE LG T T IP KS G GE Y N YI ------- LEVF G P L L A F L RLW I ELLVIRPGSQA V N AL NFAIY I LTPVFPDCEVPEWAIRL V A 169
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 146 V FGL L ----- N AIG V EIFGK V EVVL T FGMWST L --- T I F G LCGIFMAP V TH L --- SGWF GT PLNVSDL ----- SG LFG Y I 209
Cdd:TIGR00911 170 V LCV L lltlv N CLS V KWATR V QDIF T ACKLLA L lli I I T G WVQLGKGG V ES L npk NAFE GT ETSAGGI vlafy SG IWA Y G 249
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 210 G MAMFM FV GC E LVT P mapeikqa H RT I P R A MALGLLG V A scm FIY GAA inrqve N VMLDAANNVHL L DTPM A IPA - F A ER 288
Cdd:TIGR00911 250 G WNYLN FV TE E VKN P -------- Y RT L P I A IIISMPI V T --- FIY VLT ------ N IAYFTVLSPEE L LASL A VAV d F G ER 312
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 289 VM G HAG qy W LGVG L LLAG C - ATI N TLMAAVP R IIYGMALD G A LP RF L TWL H PRFK TP VIAIA I GVAIPC L HAWY lngni D 367
Cdd:TIGR00911 313 LL G VMS -- W AMPA L VGLS C f GSV N GSLFSSS R LFFVGGRE G H LP SL L SMI H VKRL TP LPSLL I VCTLTL L MLFS ----- G 385
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 695766026 368 R I VP LI LAAVC A WGVAYL L VTLSVVL LR IR RP DLP R AYRS P W F 410
Cdd:TIGR00911 386 D I YS LI NLISF A NWLFNA L AVAGLLW LR YK RP EMN R PIKV P L F 428
PRK11049
PRK11049 D-alanine/D-serine/glycine permease; Provisional
150-240
8.53e-03
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830
Cd Length: 469
Bit Score: 38.56
E-value: 8.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 150 LN AIG V EI FG KV E vv LT F G M WSTLT I FG L CGI -------- F MA P VTHLS --------- G W F G tplnv SD LSG L F GYIGM A 212
Cdd:PRK11049 148 LN LAT V KM FG EM E -- FW F A M IKIVA I VA L IVV glvmvamh F QS P TGVEA sfahlwndg G M F P ----- KG LSG F F AGFQI A 220
90 100
....*....|....*....|....*...
gi 695766026 213 M F M FVG C ELV TPM A P E I K QAHRTI PRA M 240
Cdd:PRK11049 221 V F A FVG I ELV GTT A A E T K DPEKSL PRA I 248
frlA
PRK11357 amino acid permease;
15-360
9.44e-03
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 38.30
E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 15 V GF PTT LA SS VG LIMA S PVILT V TSGFGMG G DTF -- A LA VLLAFIMMQA Q VTTF AE AA T LI P TT G SV Y D Y IACGMG R FF A 92
Cdd:PRK11357 10 L GF WAV LA IA VG TTVG S GIFVS V GEVAKAA G TPW lt V LA FVIGGLIVIP Q MCVY AE LS T AY P EN G AD Y V Y LKNAGS R PL A 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 93 I tga L CAY li VHIF A GT A ETILAGVM A L V N ---- FES I SSQMAA hqntw MVGV G MVVV F G LL NAIG VE IFGKVEVVL T FG 168
Cdd:PRK11357 90 F --- L SGW -- ASFW A ND A PSLSIMAL A I V S nlgf LTP I DPLLGK ----- FIAA G LIIA F M LL HLRS VE GGAAFQTLI T IA 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 169 MWSTL TI FGLC GIF MAP vthl SGW F GT P LNVS ----- DLSG L FGY I GMAMFMFV G CELVTP M AP EIK QAHR T I PRA MALG 243
Cdd:PRK11357 160 KIIPF TI VIGL GIF WFK ---- AEN F AA P TTTA igatg SFMA L LAG I SATSWSYT G MASICY M TG EIK NPGK T M PRA LIGS 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695766026 244 L L G V ASCMFIYGAA I NRQVENVM L DAA nnvhll D TP MAIPAFAERVM G HAGQYWLGVGLLLAGCATINTLMAAV PR II Y G 323
Cdd:PRK11357 236 C L L V LVLYTLLALV I SGLMPFDK L ANS ------ E TP ISDALTWIPAL G STAGIFVAITAMIVILGSLSSCVMYQ PR LE Y A 309
330 340 350
....*....|....*....|....*....|....*..
gi 695766026 324 MA L D GALPRFLTWL HP RFK TP VIA I AIGV A IPCLHAW 360
Cdd:PRK11357 310 MA K D NLFFKCFGHV HP KYN TP DVS I ILQG A LGIFFIF 346
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
