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Conserved domains on  [gi|695701573|ref|WP_032639038|]
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MULTISPECIES: fimbrial protein [Enterobacter cloacae complex]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 5.65e-43

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 140.94  E-value: 5.65e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIAsvvgCSASAFAATDGEGQINFTGEIIDSACQVVNGlSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELK 80
Cdd:COG3539    1 MKKLLLALLLA----LALSAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  81 NCPETVT-TAAINFGGTPDANNNSTLALTpDADAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTAvNDLQFAARYIQTG 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 695701573 160 SAVTAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 5.65e-43

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 140.94  E-value: 5.65e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIAsvvgCSASAFAATDGEGQINFTGEIIDSACQVVNGlSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELK 80
Cdd:COG3539    1 MKKLLLALLLA----LALSAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  81 NCPETVT-TAAINFGGTPDANNNSTLALTpDADAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTAvNDLQFAARYIQTG 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 695701573 160 SAVTAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 27-177 5.43e-29

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 105.81  E-value: 5.43e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  27 EGQINFTGEIIDSACQVVNGLSNPlNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPETVTTAAINFGGTPDANNNSTLA 106
Cdd:PRK15289  25 DGVVHFVGEIVDTTCEVTSDTADQ-IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLK 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573 107 LTPDAD--------------AATGVAIQLIDSSEQP-VSLYTPSKEYPL-ASGTAvnDLQFAARYIQTGSAVTAGPANSV 170
Cdd:PRK15289 104 VGTPLTagnpgdftgtgqaiAATGVGIRIFNQSDNSqVKLYNDSAYTAIdAEGKA--EMKFIARYVATNATVTAGTANAD 181


                 ....*..
gi 695701573 171 STFTVIY 177
Cdd:PRK15289 182 SQFTVEY 188
Fimbrial pfam00419
Fimbrial protein;
30-178 2.02e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 61.68  E-value: 2.02e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   30 INFTGEI--IDSACQVVNGLsnPLNVTLGKVSKTVFTGAGSTSTATKFDIELkNCPETVTTAAIN--FGGTPDANNNSTL 105
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT--PIEVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSAVKVTvgLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 695701573  106 ALTPDADAATGVAIQLIDSSEQPVSLYTP-SKEYPLASGTAVNDLQFAARYIQT-GSAVTAGPANSVSTFTVIYN 178
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGtSSIPVSATAAVATGITFTASLVATtGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 5.65e-43

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 140.94  E-value: 5.65e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIAsvvgCSASAFAATDGEGQINFTGEIIDSACQVVNGlSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELK 80
Cdd:COG3539    1 MKKLLLALLLA----LALSAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  81 NCPETVT-TAAINFGGTPDANNNSTLALTpDADAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTAvNDLQFAARYIQTG 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 695701573 160 SAVTAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 27-177 5.43e-29

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 105.81  E-value: 5.43e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  27 EGQINFTGEIIDSACQVVNGLSNPlNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPETVTTAAINFGGTPDANNNSTLA 106
Cdd:PRK15289  25 DGVVHFVGEIVDTTCEVTSDTADQ-IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLK 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573 107 LTPDAD--------------AATGVAIQLIDSSEQP-VSLYTPSKEYPL-ASGTAvnDLQFAARYIQTGSAVTAGPANSV 170
Cdd:PRK15289 104 VGTPLTagnpgdftgtgqaiAATGVGIRIFNQSDNSqVKLYNDSAYTAIdAEGKA--EMKFIARYVATNATVTAGTANAD 181


                 ....*..
gi 695701573 171 STFTVIY 177
Cdd:PRK15289 182 SQFTVEY 188
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 1-178 2.53e-27

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 101.20  E-value: 2.53e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVgcSASAFAATDGEGQINFTGEIIDSACqVVNGLSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELK 80
Cdd:PRK15209   1 MKKVVFALSALALT--STSVFAAESGDGTVKFTGEIVDAPC-VVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  81 NCP-ETVTTAAINFGGTPDANNNSTLALTPDADAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTAVndLQFAARYIQTG 159
Cdd:PRK15209  78 DCDiTTNKKVNVSFNGVGDADDSTLVSVSTEAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTV--LYFTANYVSTK 155

                        170
                 ....*....|....*....
gi 695701573 160 SAVTAGPANSVSTFTVIYN 178
Cdd:PRK15209 156 DTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
4-177 4.73e-20

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 82.31  E-value: 4.73e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   4 IALGLFIASVVGCSASAFAATDGeGQINFTGEIIDSACqVVNGLSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELKNC- 82
Cdd:PRK15194  10 IASLLFVAGAAYAADPTPVSVDG-GTIHFEGELVNAAC-SVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCd 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  83 PETVTTAAINFGGTPDANNNSTLALTP--DADAATGVAIQLIDSSEQPVSL--YTPSKEYPLASGTavNDLQFAARYIQT 158
Cdd:PRK15194  88 PVVAATAAVAFSGQADATNDNLLAVASstNTTTATGVGIEILDNTSSILKPdgATFSANQNLIEGT--NTLHFSARYKAT 165

                        170
                 ....*....|....*....
gi 695701573 159 GSAVTAGPANSVSTFTVIY 177
Cdd:PRK15194 166 GTSASAGQANADATFIMKY 184
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 14-177 8.86e-20

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 81.30  E-value: 8.86e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  14 VGCSASAFAATDGEGQINFTGEIIDSACQVVNGLSNpLNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPETVTTAAINF 93
Cdd:PRK15191   9 IGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSEN-INVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTVSF 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  94 GGTPDANNNSTLALTPDADAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTAVNDLQFAARYIQTGSAVTAGPANSVSTF 173
Cdd:PRK15191  88 SGAADSRNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGDANASATF 167


                 ....
gi 695701573 174 TVIY 177
Cdd:PRK15191 168 ILAY 171
PRK09934 PRK09934
fimbriae assembly protein;
8-178 2.90e-18

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 77.62  E-value: 2.90e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   8 LFIASVVG--CSASAFAATD-GEGQINFTGEIIDSACQVVNGLSNPlNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPE 84
Cdd:PRK09934   4 VFFACFCGllWSPLSWAADPlGEINIELHGNVVDFTCTVNTADSDK-TVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  85 TvtTAAINFGGTPdANNNSTLALTpDADAATGVAIQLIDSSEQPVSLYTPSKEYPL-ASGTAVndLQFAARYIQTGSAVT 163
Cdd:PRK09934  83 G--SASITFTGTP-ASDTNLLALD-DPAMAQTVAIEIRDSDRSRLALGQASPTVEVdANGNAT--LNFYANYIALADGVQ 156

                        170
                 ....*....|....*
gi 695701573 164 AGPANSVSTFTVIYN 178
Cdd:PRK09934 157 PGVAKADATFMINYN 171
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 1-177 2.86e-17

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 74.89  E-value: 2.86e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVGCSASAFAATDGEGQINFTGEIIDSACQVVNglsNPLNVTLGKVSKTVFTGAGSTSTATKFDIELK 80
Cdd:PRK15205   3 NKRALLPLALLLLTASGMAAPTDLGPAGDIHFTITIKAKACELEK---DSLEVDMGTMVLQKPVKVGTELNQKNFSIGLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  81 NCPEtVTTAAINFGGTPDANNNSTLALtpDADAATGVAIQLIDS--SEQPVSLYTPSK-EYPLaSGTAVNDLQFAARYIQ 157
Cdd:PRK15205  80 DCDG-ISKASVTMDGSPDPDDPSLFAL--DAGGATGVALKIKTSkgTQQYPKSTDGTPvEWAI-NGDGTTQLNYIASYVP 155

                        170       180
                 ....*....|....*....|
gi 695701573 158 TGSAVTAGPANSVSTFTVIY 177
Cdd:PRK15205 156 VNADATVGTANATVNFSVTY 175
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 1-177 6.42e-17

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 74.35  E-value: 6.42e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVGCSASAFAATDGEGQINFTGEIIDSACQV-VNGLSNplNVTLGKVSKTVFTGAGSTSTATKFDIEL 79
Cdd:PRK15190   1 MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIdISSLSQ--SIDLGQFAVGDFPSTGTTTKFKPFNINL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  80 KNCPETVTTAAINFGGTPDANNNSTLALTPDADA-----ATGVAIQLIDSSEQPVSL-YTPSKEYPLASGTavNDLQFAA 153
Cdd:PRK15190  79 KNCSRGIAGAKIWFTGEPDPDNPALLAITDTGMGsgnmlASGVGVEILNDDQDTISInNADSVVYPLKAGR--NTLSFYI 156

                        170       180
                 ....*....|....*....|....
gi 695701573 154 RYIQTGSAVTAGPANSVSTFTVIY 177
Cdd:PRK15190 157 RYKSTRPTVTSGNATAVMYFDMQY 180
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 12-178 1.67e-14

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 67.81  E-value: 1.67e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  12 SVVGCSASAFAATDGEGQINFTGEIIDSACQVVnglSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPETV-TTAA 90
Cdd:PRK15300  13 AAITLSPAALADTAKDGTVHITGLIKQNACTVK---TDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENCDANVySSVQ 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  91 INFGGTPDANNNSTLAltpDADAATGVAIQLIDSSEQPVSL-----YTPSKEYPLASGTAVNDLQFAARYIQTGSAVTAG 165
Cdd:PRK15300  90 ARFEGTLDGTDATILK---NEDDAENIGVQILDKTSTPMTFndlqaWSAAVALPTAEGVTELSMPFTARYIATAVPVKSG 166

                        170
                 ....*....|...
gi 695701573 166 PANSVSTFTVIYN 178
Cdd:PRK15300 167 TVDATATFYLQYN 179
Fimbrial pfam00419
Fimbrial protein;
30-178 2.02e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 61.68  E-value: 2.02e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   30 INFTGEI--IDSACQVVNGLsnPLNVTLGKVSKTVFTGAGSTSTATKFDIELkNCPETVTTAAIN--FGGTPDANNNSTL 105
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT--PIEVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSAVKVTvgLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 695701573  106 ALTPDADAATGVAIQLIDSSEQPVSLYTP-SKEYPLASGTAVNDLQFAARYIQT-GSAVTAGPANSVSTFTVIYN 178
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGtSSIPVSATAAVATGITFTASLVATtGGTPTAGDFNATATIVVDYQ 152
PRK15210 PRK15210
fimbrial protein;
2-177 5.06e-12

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 61.25  E-value: 5.06e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   2 NKIALGL------FIASVVGCSASAFAATDGEGQINFTGEIIDSACQVVNGlSNPLNVTLGKVSKTVFTGAGSTSTATKF 75
Cdd:PRK15210   3 NKIILAMaaagmmYGASVFAADTTPTAGPFGSGKILFTGTITNSPCDIAPG-DDAITVPFGQISYRKLNTADATTESKPF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  76 DIELKNC---PETVTTA---------AINFGGTPDANNNSTLAltpdADAATGVAIQLIDSSEqpVSLYTPSKEYP---- 139
Cdd:PRK15210  82 TIHLQNCafdPNIPDTAgsagkmskvTVSFSGTANTSKKAYTT----SGSAQHVGVQLLKSDN--TSIIEPNTPMPdgda 155

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 695701573 140 --LASGTavNDLQFAARYIQTGSAVTAGPANSVSTFTVIY 177
Cdd:PRK15210 156 qqLQAGN--NELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 1-178 9.74e-12

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 60.22  E-value: 9.74e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVG----CSASAFAATDGEGQINFTGEIIDSACQVvNGLSNPLNVTLGKVSKTVFTGAGSTSTATK-F 75
Cdd:PRK15187   1 MKKPVLALMVSAIAFggmlSTAQADTTTVTGGTVNFVGQVVDAACSV-SADSVDQTVTLGQVRASKLTEAGMVANQKEdF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  76 DIELKNC-PETVTTAAINFGGTPDANNNSTLALTPDADAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTavNDLQFAAR 154
Cdd:PRK15187  80 TIKLEDCdTQTSQNAAVIFNGQQDANQPGSLANTAGAGSATNVALQLYGPDGQALNIGESSSTVTLNDGE--NVIPLSVD 157

                        170       180
                 ....*....|....*....|....
gi 695701573 155 YIQTGSAvTAGPANSVSTFTVIYN 178
Cdd:PRK15187 158 YIATGTA-TAGNVTATATFSMVYS 180
PRK09733 PRK09733
fimbrial-like protein;
1-177 1.22e-11

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 59.96  E-value: 1.22e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVgcSASAFAaTDGEGQINFTGEIIDSACQVVNGLSNpLNVTLGKVSKTVFTgAGSTSTATKFDIELK 80
Cdd:PRK09733   2 FKKSLLVAGVAMIL--SNNVFA-DEGHGIVKFKGEVISAPCSIKPGDED-LTVNLGEVADTVLK-SDQKSLAEPFTIHLQ 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  81 NC-----PETVTTAAINFG-GTPDANNNSTLALTPDAD--AATGVAIQLIDSSEQPVSLYTPSkEYPLASGTAVNDLQFA 152
Cdd:PRK09733  77 DCmlsqgGTTYSKAKVTFTtANTMTGQSDLLKNTKETEigGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQELNFK 155

                        170       180
                 ....*....|....*....|....*
gi 695701573 153 ARYIQTGSAVTAGPANSVSTFTVIY 177
Cdd:PRK09733 156 ARMESPSKDATPGNVYAQADYKIAY 180
PRK15296 PRK15296
fimbrial protein SthA;
16-177 6.34e-10

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 55.48  E-value: 6.34e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  16 CSASAFAATdgegQINFTGEIIDSACQVVNGLSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPETV----TTAAI 91
Cdd:PRK15296  16 ASTPVFAQN----TITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGtgvpTQAMF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  92 NFGGTPDANNNSTLALTPDA--DAATGVAIQLIDSSEQPVSLYTPSKEYPLASGTAVNDLQFAARYIQTGSA-VTAGPAN 168
Cdd:PRK15296  92 RFHGATDDSNPTYFKNADEGseTGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFTYYAAMANDGSAtVTGGDVS 171


                 ....*....
gi 695701573 169 SVSTFTVIY 177
Cdd:PRK15296 172 TQVTYTVSY 180
PRK15293 PRK15293
fimbrial protein SthD;
17-177 4.88e-09

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 53.14  E-value: 4.88e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  17 SASAFAATDGEGQINFTGEIIDSACQVvnglSNPLNVTLGKVSKTVFTGAGSTSTATKFDIELKNCPETVTTAAINFGGT 96
Cdd:PRK15293  24 SISAAYNTADAVDINVTGLIYADPCTV----TVPDTLSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGV 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  97 PDANNNSTLALTPD--ADAATGVAIQLIDSSEQPVSLYTPSKEY--PLASGTAVNDLQFAARYIQTGSAVTAGPANSVST 172
Cdd:PRK15293 100 PYPDPNYASAIYANsaANPAQDLGLQLFNLDGKSLVNLANNVTYtvDINSNTHEANLPVAARMYTPYGKVTAGDFTSVVT 179


                 ....*
gi 695701573 173 FTVIY 177
Cdd:PRK15293 180 ITIAW 184
PRK15220 PRK15220
fimbrial protein YehD;
12-176 7.46e-09

fimbrial protein YehD;


Pssm-ID: 237928  Cd Length: 178  Bit Score: 52.51  E-value: 7.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  12 SVVGCSASAFAATDGEGQINFTGEIIDSACQVVNglSNPLNVTLGKVSKTVFTG--AGSTSTATKFD--IELKNCPETVT 87
Cdd:PRK15220  12 SAVFMSAGAFAADEDMGELKINGKVVGTTCQFLG--TNSATIELNQVGVDRLANlnPGQIYTGYTNPtaMPLKVKCTQGA 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  88 TAAINFGGTPDANNNSTLALTPDADAAtGVAIQLIDSSEQPvslyTPSKEYPLASGTAVN---DLQFAARYIQTGSAVTA 164
Cdd:PRK15220  90 APRISFSRSQFVDNMDITKNNGSANGA-GFAVYYDGTDVKP----DPETGVTLNPNKFENgvyTLNFSARYARVDNDVTS 164

                        170
                 ....*....|..
gi 695701573 165 GPANSVSTFTVI 176
Cdd:PRK15220 165 GDVESTLTLTVV 176
PRK15292 PRK15292
type 1 fimbrial protein;
48-178 1.61e-08

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 52.64  E-value: 1.61e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  48 SNPLNVTLGKVSKTVFTGAGSTSTATKfDIELKNCPETVTTAAINFG-GTPDANNNSTLALTPDA--DAATGVAIQL-ID 123
Cdd:PRK15292 203 TPALTFDMGSINAGSFANSQTVGTAEQ-DILLSCEPGTNVSASVSAQpASGDNPDNTVIALSNASapTSATGVGVQLnIQ 281

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573 124 SSE-----------QPVSLYTPSKEYPLASGTAVN------------------DLQFAARYIQTGSAVTAGPANSVSTFT 174
Cdd:PRK15292 282 APDagfftdslpinTKIDLFTSTRTTNADGSQTVSysyftnpdspggamnmstTLKISANYYKTGATVTAGQANATGTLT 361


                 ....
gi 695701573 175 VIYN 178
Cdd:PRK15292 362 LTYN 365
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
28-177 2.99e-08

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 50.63  E-value: 2.99e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  28 GQINFTGEIIDSACqVVNGLSNPLNVTLGKVSKTVFTGAGSTSTAT-KFDIELKNCPETVT-TAAINFGGTPDANNNSTL 105
Cdd:PRK15200  27 GRVHLRGQLVNGGC-AVATESQDLRVLMGQYRTNAFTGPGSFAPVSvPFSLRLISCSAEVWrHVGIAFAGVTPAEDPHVF 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 695701573 106 ALTPDADAATGVAIQLIDSSE-QPVSLYTPSKEYPLAsgTAVNDLQFAARYIQTGSAVTAGPANSVSTFTVIY 177
Cdd:PRK15200 106 LASGEGIGNAGIGLALFDDQQrQIIPNTLPLHYAPIL--TSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
PRK15262 PRK15262
putative fimbrial protein StaF; Provisional
 1-169 3.99e-07

putative fimbrial protein StaF; Provisional


Pssm-ID: 237933  Cd Length: 197  Bit Score: 47.76  E-value: 3.99e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVgCSASAFAATDgegqINFTGEIIDSACQVvnGLSNPLNVTLGKVSKTVFTGAGSTST----ATKFD 76
Cdd:PRK15262   6 MKKIILFLGLLFAL-TSPPAYAGQD----VDLTANIKNSTCQS--GISNNGNVDLGTVGVGYFADNVTAETyypgGKEFT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  77 IELKNCPETVTTAAIN---FGGTP-----DANNNSTLALTPDADAA--TGVAIQLIDSSEQPVSLYTPS----KEYPLAS 142
Cdd:PRK15262  79 ITVVDCALQGTGSVLNqlhFDFRPqsgvmATGSQQIFANEAVAGGAknVGVVIFSIQDPANTFNVLNSDgssrSVYPVMT 158

                        170       180       190
                 ....*....|....*....|....*....|
gi 695701573 143 GTAVN-DLQFAARYIQTGSA--VTAGPANS 169
Cdd:PRK15262 159 SALNNsSWKFYARMQKIDPAldVTSGQVTS 188
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-178 1.02e-04

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 41.18  E-value: 1.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   1 MNKIALGLFIASVVGCSASAFAATDgEGQINFTGEIIDSACQVV--NGLS---NPLNVTLGKVSKTVF---TGAGSTSTA 72
Cdd:PRK15307   3 LKKYGLAAAVAMTLSASSAMAADPD-TGTITFHGLVTNNTCNISldNKIDqdgNDFDITLPTVFVKDFataLGVNSTLGE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573  73 TKFDIELKNCPE-TVTTAAINFGGTPDANNNSTLALTPDAD---AATGVAIQLIDSSEQPVSL----YTPSKEYPLASGT 144
Cdd:PRK15307  82 KQFTLNLSECDNaTLKDASAQFNSWGGSSATSGGLLVPPANlqgSATNVNLVLANNGNTATDLikidQPNNTQKATISTD 161

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 695701573 145 AVNDLQFAARYIQTG------SAVTAGPANSVSTFTVIYN 178
Cdd:PRK15307 162 GTGDLFYRVAYTQGQkwnadtSPVTSGTVQAQVAFTMIYN 201
FimA pfam16970
Type-1 fimbrial protein, A; FimA is a family of Gram-negative fimbrial component A proteins ...
 55-177 4.53e-03

Type-1 fimbrial protein, A; FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.


Pssm-ID: 339870  Cd Length: 145  Bit Score: 35.86  E-value: 4.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695701573   55 LGKVSKTVFTGAGSTSTATKFDIELKNCPETVTTAA-----INFGGTPDANNNSTLALTPDaDAATGVAIQLIDSSEQPV 129
Cdd:pfam16970   1 LPTISNKALADPGETAGGTPFDIKLTECPQALDGAGhvgafFEPGGSTDFTSGNLFAIAAD-NAAGDEQIPLLKADGTQA 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 695701573  130 SLYTPS-----------KEYPLASGTAVND-----LQFAARYIQTG-SAVTAGPANSVSTFTVIY 177
Cdd:pfam16970  80 NLDGSAiflgkdfaaqaAHTFLVSETAGGDgygatLRYLACYIASGaGSIVAGNLKSQVGFSIAY 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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