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Conserved domains on  [gi|695294905|ref|WP_032497235|]
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MULTISPECIES: toxin-antitoxin system YwqK family antitoxin [Bacteroidales]

Protein Classification

toxin-antitoxin system YwqK family antitoxin( domain architecture ID 11458243)

toxin-antitoxin (TA) system YwqK family antitoxin similar to YwqK (RtbO) antitoxin, the antitoxin component of the YwqJK (RtbNO) TA system that is encoded in the chromosome of Bacillus subtilis subsp. subtilis str. 168

PubMed:  31075979

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
22-168 4.14e-13

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


:

Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 65.09  E-value: 4.14e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695294905  22 IIEWNNLQTITDNARRTVYYEKGSKQPLQGEYRIVRGLDEERVKLSDGIIngdYFRYRDGVLRESGIYAKGKRNGTFTEY 101
Cdd:COG2849   21 ELGDTLLEKNGYKSGVKEKTEDSYNEGGKLIKKKLGKGLGKYKKGKLGEW---KTYYPNGQLKSEGTYKNGKLEGEWKEY 97

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695294905 102 YQDGvTLRKETPMQQGKIDGTVKTYFRNGKIETEKEYRQSVESGRERRFDsKTGEQIFESHYIDGKK 168
Cdd:COG2849   98 YENG-KLKSEGNYKNGKLHGEWKEYYENGKLKEEGNYKNGKKDGVWKYYD-ENGKLVKEEEYKNGKK 162
 
Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
22-168 4.14e-13

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 65.09  E-value: 4.14e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695294905  22 IIEWNNLQTITDNARRTVYYEKGSKQPLQGEYRIVRGLDEERVKLSDGIIngdYFRYRDGVLRESGIYAKGKRNGTFTEY 101
Cdd:COG2849   21 ELGDTLLEKNGYKSGVKEKTEDSYNEGGKLIKKKLGKGLGKYKKGKLGEW---KTYYPNGQLKSEGTYKNGKLEGEWKEY 97

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695294905 102 YQDGvTLRKETPMQQGKIDGTVKTYFRNGKIETEKEYRQSVESGRERRFDsKTGEQIFESHYIDGKK 168
Cdd:COG2849   98 YENG-KLKSEGNYKNGKLHGEWKEYYENGKLKEEGNYKNGKKDGVWKYYD-ENGKLVKEEEYKNGKK 162
 
Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
22-168 4.14e-13

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 65.09  E-value: 4.14e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695294905  22 IIEWNNLQTITDNARRTVYYEKGSKQPLQGEYRIVRGLDEERVKLSDGIIngdYFRYRDGVLRESGIYAKGKRNGTFTEY 101
Cdd:COG2849   21 ELGDTLLEKNGYKSGVKEKTEDSYNEGGKLIKKKLGKGLGKYKKGKLGEW---KTYYPNGQLKSEGTYKNGKLEGEWKEY 97

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 695294905 102 YQDGvTLRKETPMQQGKIDGTVKTYFRNGKIETEKEYRQSVESGRERRFDsKTGEQIFESHYIDGKK 168
Cdd:COG2849   98 YENG-KLKSEGNYKNGKLHGEWKEYYENGKLKEEGNYKNGKKDGVWKYYD-ENGKLVKEEEYKNGKK 162
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
38-195 9.34e-11

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 58.54  E-value: 9.34e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695294905  38 TVYYEKGSKQPLQGEYRIVRGLDEERVKLSDGIINGDYFRYRDGVLRESGIYAKGKRNGTFTEYYQDGvTLRKETPMQQG 117
Cdd:COG2849   10 SKYLLSLKLKYELGDTLLEKNGYKSGVKEKTEDSYNEGGKLIKKKLGKGLGKYKKGKLGEWKTYYPNG-QLKSEGTYKNG 88

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695294905 118 KIDGTVKTYFRNGKIETEKEYRQSVESGRERRFDsKTGEQIFESHYIDGKKEGEEWEIFENGRTLRsrtTRHYRNGKL 195
Cdd:COG2849   89 KLEGEWKEYYENGKLKSEGNYKNGKLHGEWKEYY-ENGKLKEEGNYKNGKKDGVWKYYDENGKLVK---EEEYKNGKK 162
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
65-222 2.40e-08

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 51.99  E-value: 2.40e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 695294905  65 KLSDGIINGDYFRYRDGVLRESGIYAKGKRNGTFTEYYQDGVTLRKETPMQQGKIDGTVKTYFRNGKIETEKEYRQSVES 144
Cdd:COG2849   12 YLLSLKLKYELGDTLLEKNGYKSGVKEKTEDSYNEGGKLIKKKLGKGLGKYKKGKLGEWKTYYPNGQLKSEGTYKNGKLE 91

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 695294905 145 GRERRFDSkTGEQIFESHYIDGKKEGEEWEIFENGRTlrsRTTRHYRNGKLDGSYRvESTRDGKpyITIEGQYTDGEK 222
Cdd:COG2849   92 GEWKEYYE-NGKLKSEGNYKNGKLHGEWKEYYENGKL---KEEGNYKNGKKDGVWK-YYDENGK--LVKEEEYKNGKK 162
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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