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Conserved domains on  [gi|662087890|ref|WP_030047403|]
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MULTISPECIES: molecular chaperone [Pseudomonas]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
17-236 1.42e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 215.62  E-value: 1.42e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  17 PTSEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:COG3121   19 AAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTG 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQARDRESLYWLNIYEIPPqATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVS 176
Cdd:COG3121   99 PPLPQDRESLFRLNVDEIPP-KDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTVTNPGPYYVT 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 177 LAGLALEIGETRLDLPGTLLAPRSQRRLGLPWRVDGGTRGEVAFDWIDDNGVSRQERKAL 236
Cdd:COG3121  178 LSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
17-236 1.42e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 215.62  E-value: 1.42e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  17 PTSEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:COG3121   19 AAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTG 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQARDRESLYWLNIYEIPPqATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVS 176
Cdd:COG3121   99 PPLPQDRESLFRLNVDEIPP-KDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTVTNPGPYYVT 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 177 LAGLALEIGETRLDLPGTLLAPRSQRRLGLPWRVDGGTRGEVAFDWIDDNGVSRQERKAL 236
Cdd:COG3121  178 LSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PRK15246 PRK15246
fimbrial assembly chaperone;
17-231 1.38e-47

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 157.04  E-value: 1.38e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  17 PTSEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:PRK15246   6 GPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQ-ARDRESLYWLNIYEIPPQATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFV 175
Cdd:PRK15246  86 RQQlATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYM 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 662087890 176 SLAgLALEIGETRLDLpgtLLAPRSQRRLGLPWRVDGGTrgEVAFDWIDDNGVSRQ 231
Cdd:PRK15246 166 SLT-LTMDNKKSIGDI---MVAPKTALDVPLTRSPTPGA--SINYAVINDSGNWRQ 215
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 23-145 2.41e-47

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 152.74  E-value: 2.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890   23 VTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQARD 102
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 662087890  103 RESLYWLNIYEIPPQATAEAAGRpRLTVTLRTQMKVLYRPHGL 145
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQN-GLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
17-236 1.42e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 215.62  E-value: 1.42e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  17 PTSEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:COG3121   19 AAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTG 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQARDRESLYWLNIYEIPPqATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVS 176
Cdd:COG3121   99 PPLPQDRESLFRLNVDEIPP-KDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTVTNPGPYYVT 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 177 LAGLALEIGETRLDLPGTLLAPRSQRRLGLPWRVDGGTRGEVAFDWIDDNGVSRQERKAL 236
Cdd:COG3121  178 LSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PRK15246 PRK15246
fimbrial assembly chaperone;
17-231 1.38e-47

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 157.04  E-value: 1.38e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  17 PTSEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:PRK15246   6 GPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQ-ARDRESLYWLNIYEIPPQATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFV 175
Cdd:PRK15246  86 RQQlATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYM 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 662087890 176 SLAgLALEIGETRLDLpgtLLAPRSQRRLGLPWRVDGGTrgEVAFDWIDDNGVSRQ 231
Cdd:PRK15246 166 SLT-LTMDNKKSIGDI---MVAPKTALDVPLTRSPTPGA--SINYAVINDSGNWRQ 215
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 23-145 2.41e-47

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 152.74  E-value: 2.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890   23 VTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQARD 102
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 662087890  103 RESLYWLNIYEIPPQATAEAAGRpRLTVTLRTQMKVLYRPHGL 145
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQN-GLQLALRSRIKLFYRPAGL 122
PRK09926 PRK09926
fimbrial chaperone;
28-227 3.73e-47

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 156.42  E-value: 3.73e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  28 TRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQ-ARDRESL 106
Cdd:PRK09926  32 TRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQTIKLMYTASTAlPKDRESV 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 107 YWLNIYEIPPQATAEA-AGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDE----TLRVDNPTPYFVSLAGLA 181
Cdd:PRK09926 112 FWFNVLEVPPKPDAEKvANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSegkaSLRVTNPTPYYVSFSSGD 191

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 662087890 182 LEIGETRLDLPGTLLAPRSQRRLGLPWRVDGGTRGEVAFDWIDDNG 227
Cdd:PRK09926 192 LEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFG 237
PRK15208 PRK15208
molecular chaperone LpfB;
21-229 2.62e-32

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 117.32  E-value: 2.62e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  21 AGVTAERTRLVFVEGQREASLLLVNQNPY-PVLVQAWVDDGAldGEPDTalaPFLPLPPVFRLEPGRQRSLRLLATGQAQ 99
Cdd:PRK15208  21 GGVALSSTRVIYDGSKKEASLTVNNKSKTeEFLIQSWIDDAN--GNKKT---PFIITPPLFKLDPTKNNVLRIVNITNTL 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 100 ARDRESLYWLNIYEIPPQaTAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVSLAG 179
Cdd:PRK15208  96 PQDRESVYWINVKAIPAK-SEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIKVENPSAFNLTFNQ 174

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 662087890 180 LAleIGETRLDLPGTLLApRSQRRLGLPWRVdgGTRGEVAFDWIDDNGVS 229
Cdd:PRK15208 175 FY--ANGRDIEKAGMVPA-KGSLNIELPAGT--GKVSEVKYNIINDFGTA 219
lfpB PRK15290
fimbrial chaperone;
17-227 3.68e-32

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 117.40  E-value: 3.68e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  17 PTSEAGVTAERTRLVFVEGQREASLLLVNQN-PYPVLVQAWVDDGALDgepDTALAPFLPLPPVFRLEPGRQRSLRLLAT 95
Cdd:PRK15290  33 ALTYAGVVIGGTRVVYLSNNPDKSISVFSKEeKIPYLIQAWVDPFNKE---DKSKAPFTVIPPVSRLEPSQEKVLRIIHT 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  96 -GQAQARDRESLYWLNIYEIPPQATAEAAGrpRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYF 174
Cdd:PRK15290 110 kGVSLPDDRESVFWLNIKNIPPSASNKATN--SLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLIAENPNPIH 187

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 662087890 175 VSLAGLALEiGEtrlDLPGTLLAPRSQRRLGLPWRVDGgtrGEVAFDWIDDNG 227
Cdd:PRK15290 188 ISVMDVIVD-GH---DVPLNMIRPFETLTLPLPANSAG---GQMTWRFINDYG 233
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 21-234 8.55e-32

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 116.03  E-value: 8.55e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  21 AGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEpdTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQA 100
Cdd:PRK15299  22 AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGA--SGDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLP 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 101 RDRESLYWLNIYEIPpqATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVSLAgl 180
Cdd:PRK15299 100 EDRESLYWLDIKSIP--SSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTPYYMNFA-- 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 662087890 181 ALEIGETRLDLPgTLLAPRSQRRLGLPwrvdGGTRGEVAFDWIDDNGVSRQERK 234
Cdd:PRK15299 176 TLSVGSQKVKAP-RYVAPFGNAQYTLP----AAASGPIAWSIINDFGGTGPEHK 224
PRK15249 PRK15249
fimbrial chaperone;
21-207 6.03e-31

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 114.51  E-value: 6.03e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  21 AGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEP-DTALAPFLPLPPVFRLEPGRQRSLRLLATG-QA 98
Cdd:PRK15249  28 ASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPeNSSAMPFIATPPVFRIQPKAGQVVRVIYNNtKK 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  99 QARDRESLYWLNIYEIPPQATAEAAGRPRLTVTLRTQMKVLYRPHGLHpHAEDAAAELGF-ALRDET----LRVDNPTPY 173
Cdd:PRK15249 108 LPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLG-KPDNLAKKLQIkTVNKGSgksgIVIVNPQPW 186

                        170       180       190
                 ....*....|....*....|....*....|....
gi 662087890 174 FVSLAGLALEIGETRLDLPGTLLAPRSQRRLGLP 207
Cdd:PRK15249 187 FASLSNLNVKVNGASYNLDADMIAPFSSQTWWLP 220
PRK15211 PRK15211
fimbrial chaperone;
18-230 4.06e-29

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 109.14  E-value: 4.06e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  18 TSEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDD-GALDGEpdtalAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:PRK15211  19 QAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNtTQGSST-----VYMVPAPPFFKVRPKEKQIIRIMKTD 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQARDRESLYWLNIYEIPPQATAEAAGrpRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVS 176
Cdd:PRK15211  94 SALPKDRESLFWLNVQEIPPKPKASEGN--VLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGETYLKNPTPYYFA 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 662087890 177 LAGLALEIGETRL--DLPG--TLLAPRSQRRLGLPwrvdgGTRGEVAFDWIDDNGVSR 230
Cdd:PRK15211 172 VTGVKLNGQPVKLsdRVMNeiAQLAPFSEVSLGKL-----SLNGTVTVQAVNDWGGTQ 224
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 19-227 6.84e-28

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 106.29  E-value: 6.84e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  19 SEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRL--EPGRQRSLRLLATg 96
Cdd:PRK15253  31 AHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVaaESGQQIKIKKMPN- 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 qAQARDRESLYWLNIYEIPPQaTAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVS 176
Cdd:PRK15253 110 -SLPDNKESLFYLNVLDIPPN-SQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWIT 187

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 662087890 177 LAGlaLEIGETRLDLPGTLLAPRSQRRLGLPWRVDggTRGEVAFdwIDDNG 227
Cdd:PRK15253 188 VTD--VKAGNTKINDQTIMLPPLSTQNINMKYAST--SQYEVTI--IDDNG 232
PRK15195 PRK15195
molecular chaperone FimC;
22-227 8.98e-28

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 105.71  E-value: 8.98e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  22 GVTAERTRLVFVEGQREASLLLVNQNPYP-VLVQAWVDDGALDGEpdtalAPFLPLPPVFRLEPGRQRSLRLLATGQAQA 100
Cdd:PRK15195  26 GIALGATRVIYPADAKQTSLAIRNSHTNErYLVNSWIENSSGVKE-----KSFIVTPPLFVSEPKSENTLRIIYAGPPLA 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 101 RDRESLYWLNIYEIPPQATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVSLAGl 180
Cdd:PRK15195 101 ADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVHNPSPYYVTLVN- 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 662087890 181 aLEIGETRLDlpGTLLAPRSQRRLGLPwrvdGGTRGEVAFDWIDDNG 227
Cdd:PRK15195 180 -LQVGSQKLG--NAMIAPKVNSQIPLP----SGVQGKLKFQTVNDYG 219
PRK15224 PRK15224
pili assembly chaperone PapD;
28-227 1.99e-27

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 104.82  E-value: 1.99e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  28 TRLVFVEGQREASLLLVNQNPYPVLVQAwvddgALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQARDRESLY 107
Cdd:PRK15224  35 TRVIYHAGTAGATLSVSNPQNYPILVQS-----SVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQ 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 108 WLNIYEIPP---QATAEAAGRP-RLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVSLAGLALE 183
Cdd:PRK15224 110 WVCIKAVPPenePSDTQAKGATlDLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVG 189

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 662087890 184 iGETRLDLpgTLLAPRSQRRLGLPwrvdGGTRGEVAFDWIDDNG 227
Cdd:PRK15224 190 -GKPITGL--EYIPPFADKTLNMP----GSAHGDIEWRVITDFG 226
PRK15295 PRK15295
fimbrial assembly chaperone;
19-235 2.14e-27

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 104.64  E-value: 2.14e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  19 SEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDgepDTALAPFLPLPPVFRLEPGRQRSLRLLATGQA 98
Cdd:PRK15295  17 AHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQ---VTNKQAFIITPPLFRLDAGQKNSIRVIRSGAP 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  99 QARDRESLYWLNIYEIPpqATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAE-LGFALRDETLRVDNPTPYFVSL 177
Cdd:PRK15295  94 LPADRESMYWLNIKGIP--SIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQqLKWQTAGDVITVNNPTPYYMNF 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 662087890 178 AGLALEIGETRldlPGTLLAPRSQrrLGLPWRVDGGTRGEVAFDWIDDNGVSRQERKA 235
Cdd:PRK15295 172 ASVTLNSHEVK---SATFVPPKSS--ASFKLGSTAAPHGTVTWRLISDYGMSLEPHSG 224
PRK15233 PRK15233
fimbrial chaperone SefB;
22-227 1.05e-21

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 90.17  E-value: 1.05e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  22 GVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDgaldgEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQAR 101
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYN-----DDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNK 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 102 DRESLYWLNIYEIPPQATAEAAGRPRLTVTLRTQ------MKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFV 175
Cdd:PRK15233 116 NEESLYWLCVKGVPPLNDNESNNKNNITTNLNVNvvtnscIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYV 195

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 662087890 176 SLAGlaLEIGETRLDLPGTLLAPRSQRRLglpwrvDGGTRGEVAFDWIDDNG 227
Cdd:PRK15233 196 NIAN--IKSGNLSFNIPNGYIEPFGYAQL------PGGVHSKITLTILDDNG 239
PRK15218 PRK15218
fimbrial assembly chaperone;
21-227 5.20e-21

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 87.73  E-value: 5.20e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  21 AGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQA 100
Cdd:PRK15218  18 SGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKKLANNLP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 101 RDRESLYWLNIYEIPPQaTAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVSLAGL 180
Cdd:PRK15218  98 GDRESLFYLNVLDIPPN-SDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISVKNNSANWITIPEI 176

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 662087890 181 aleIGETRLDLPGTLLAPRSQRRLGLPWRVDGGTrgevaFDWIDDNG 227
Cdd:PRK15218 177 ---KAKSKVNKETLLLAPWSSQSITTTVVVNSYT-----VTLIDDSG 215
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 19-201 1.31e-19

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 84.45  E-value: 1.31e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  19 SEAGVTAERTRLVFVEGQREASLLLVNQNP-YPVLVQAWVDDGALdgEPDTALapFLPLPPVFRLEPGR--QRSLRLLAT 95
Cdd:PRK15274  24 SHSAIVPDRTRVIFNGNENSITVTLKNGNAtLPYLAQAWLEDDKF--AKDTRY--FTALPPLQRIEPKSdgQVKVQPLPA 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  96 GQAQARDRESLYWLNIYEIPPQATaeaagRPR-LTVTLRTQMKVLYRPHGLHPHAEDA---AAELGFALRDETLRVDNPT 171
Cdd:PRK15274 100 AASLPQDRESLFYFNVREIPPKSD-----KPNtLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLTYQGDGVIFDNPT 174

                        170       180       190
                 ....*....|....*....|....*....|
gi 662087890 172 PYFVSLAGLALEIGETRLDLPGTLLAPRSQ 201
Cdd:PRK15274 175 PFYLVISNAGSKENETASGFKNLLIAPREK 204
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 21-233 1.96e-19

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 83.66  E-value: 1.96e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  21 AGVTAERTRLVFVEGQREASLLLVNQNPYPV-LVQAWVDDGalDGEPDTalaPFLPLPPVFRLEPGRQRSLRLLATGQAQ 99
Cdd:PRK15188  27 GGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANA--DGSRST---DFIITPPLFVIQPKKENILRIMYVGPSL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 100 ARDRESLYWLNIYEIPPQATAEAAGRpRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVSLag 179
Cdd:PRK15188 102 PTDRESVFYLNSKAIPSVDKNKLTGN-SLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSM-- 178

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 662087890 180 laLEIGETRLDLPGTLLAPRSQrrLGLPwrvdgGTRGEVAFDWIDDNGVSRQER 233
Cdd:PRK15188 179 --VELYSAGKKLPNTMVPPKGA--ITLP-----ATPGQVSLRTVNDFGATTPAR 223
PRK15285 PRK15285
fimbrial chaperone StfD;
18-205 2.38e-18

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 80.98  E-value: 2.38e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  18 TSEAGVTAERTRLVFVEGQREASLLLVNQNP-YPVLVQAWVDDgaldgEPDTAL-APFLPLPPVFRLEPGR--QRSLRLL 93
Cdd:PRK15285  22 SAQAAIAPDRTRLVFRGEDKSISVDLKNANSkLPYLAQSWVED-----EKGVKItSPLIVVPPVQRIEPSAigQVKIQGM 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  94 ATGQAQARDRESLYWLNIYEIPPQATaeaagRPR-LTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDE--TLRVDNP 170
Cdd:PRK15285  97 PALASLPQDRETLFYYNVREIPPQSD-----KPNtLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQgnGYQVSNP 171

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 662087890 171 TPYFVSLAGLALEI-GETRLDLPGTLLAPRSQRRLG 205
Cdd:PRK15285 172 TGYYVVLSNASNRMdGTPARGFSPLVIAPKSNVTLG 207
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 19-183 1.30e-16

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 75.97  E-value: 1.30e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  19 SEAGVTAERTRLVFVEGQREASLLLVNQNPY-PVLVQAWVDDGalDGEPDTALapfLPLPPVFRLEPGRQRSLRLLAT-- 95
Cdd:PRK15254  14 SPAAVNVDRTRIIMDAPQKTVAITLNNDDKTtPFLAQSWVTDA--DGVRTDAL---MALPPLQRIDAGQKSQVRITQVrg 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  96 -GQAQARDRESLYWLNIYEIPPQATAEAAgrprLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDET-LRVDNPTPY 173
Cdd:PRK15254  89 lTDKLPQDRETLFWFNVRGVPPKPEDDNV----LQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGhLTLRNPTPY 164

                        170
                 ....*....|
gi 662087890 174 FVSLAGLALE 183
Cdd:PRK15254 165 YITVAWLGAD 174
PRK11385 PRK11385
fimbrial chaperone;
20-203 5.55e-16

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 74.40  E-value: 5.55e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  20 EAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGA--LDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLAT-G 96
Cdd:PRK11385  25 QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTrwAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTeS 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQARDRESLYWLNIYEIPPQATAEAAgrprLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPYFVS 176
Cdd:PRK11385 105 DILPVDRETLFELSIASVPSGKVENQS----VKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYIN 180

                        170       180
                 ....*....|....*....|....*..
gi 662087890 177 LagLALEIGETRLDLPGtLLAPRSQRR 203
Cdd:PRK11385 181 L--IQVSVNGKALSNAG-VVPPKSQRQ 204
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
19-177 6.22e-16

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 74.35  E-value: 6.22e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  19 SEAGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDDGAL--DGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATG 96
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRwpGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  97 QAQARDRESLYWLNIYEIPpqataeaAGRP---RLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFALRDETLRVDNPTPY 173
Cdd:PRK15192 100 APLPADRESLFTLSIAAIP-------SGKPeanRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPY 172


                 ....
gi 662087890 174 FVSL 177
Cdd:PRK15192 173 YVTL 176
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 21-218 1.02e-12

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 65.06  E-value: 1.02e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890  21 AGVTAERTRLVFVEGQREASLLLVNQNPYPVLVQAWVDdgalDGEPDTALApFLPLPPVFRLEPGRQRSLRLLATGQAQA 100
Cdd:PRK09918  24 AGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLV----DLPEDKSKL-LLVTPPVARVEPGQSQQVRFILKSGSPL 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662087890 101 rDRESLYWLNIYEIPPQATaeaaGRPRLTVTLRTQMKVLYRPHGLhPHAEDAAAELGFALRDETLRVDNPTPYFVSLA-G 179
Cdd:PRK09918  99 -NTEHLLRVSFEGVPPKPG----GKNKVVMPIRQDLPVLIQPAAL-PVVRDPWKLLVWSISGNNLVVSNPSPYVVRLGqQ 172

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 662087890 180 LALEIGETRLDLPGTLLAPRSQRRLGLPWRVDGGTRGEV 218
Cdd:PRK09918 173 VILLPSGKVVALPKPYILPGESLTVAITNSKATDTKVRF 211
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 167-227 1.31e-12

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 60.74  E-value: 1.31e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 662087890  167 VDNPTPYFVSLAGLALEIGETRLDLPGTLLAPRSQRRLGLPwrVDGGTRGEVAFDWIDDNG 227
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGL--PAPAAGGTVSYTYINDYG 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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