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Conserved domains on  [gi|658549661|ref|WP_029742048|]
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MULTISPECIES: MFS transporter [Enterobacter]

Protein Classification

MFS transporter( domain architecture ID 13023516)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

PubMed:  26098515|26758938
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
13-384 6.19e-71

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 227.05  E-value: 6.19e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  13 ILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLI 92
Cdd:cd17324    1 LLALALAAFAIGTTEYVIQGLLPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  93 TASSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVAS 171
Cdd:cd17324   81 AALAPSFALLLLARALAGLAhGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 172 VLMVIMALALWRGLPKVKQENHLNYPqlLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIG 251
Cdd:cd17324  161 VLALLAALLLWRLLPSLPPKKPGSLG--LLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVPGFSSSAIIG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 252 LFGLAGAAGALGARPAGGLADKGkSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIYRVKP 331
Cdd:cd17324  239 LLLLFGVAGVVGSPLAGRLADRG-GRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAP 317
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 658549661 332 EARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWW 384
Cdd:cd17324  318 EARGLASSLYLAAYNLGGALGAALGGLVLDHGGWAGVGWVGAALLLLALLLAL 370
 
Name Accession Description Interval E-value
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
13-384 6.19e-71

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 227.05  E-value: 6.19e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  13 ILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLI 92
Cdd:cd17324    1 LLALALAAFAIGTTEYVIQGLLPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  93 TASSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVAS 171
Cdd:cd17324   81 AALAPSFALLLLARALAGLAhGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 172 VLMVIMALALWRGLPKVKQENHLNYPqlLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIG 251
Cdd:cd17324  161 VLALLAALLLWRLLPSLPPKKPGSLG--LLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVPGFSSSAIIG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 252 LFGLAGAAGALGARPAGGLADKGkSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIYRVKP 331
Cdd:cd17324  239 LLLLFGVAGVVGSPLAGRLADRG-GRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAP 317
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 658549661 332 EARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWW 384
Cdd:cd17324  318 EARGLASSLYLAAYNLGGALGAALGGLVLDHGGWAGVGWVGAALLLLALLLAL 370
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
4-351 1.56e-31

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 122.39  E-value: 1.56e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   4 TTQGLSPALILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMT 83
Cdd:COG2814    3 ATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  84 LLAAGGMLITASSQSLTMMIVGTALTGLFS-VVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGG 162
Cdd:COG2814   83 LLFALGSLLCALAPSLWLLLAARFLQGLGAgALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFG 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 163 WRTVYWVASVLMVIMALALWRGLPKVKQENHLNYPQLLASVFSlftqDKLLRTRALLGCFTFANFSILWTSMAFLLAAPP 242
Cdd:COG2814  163 WRWVFLVNAVLALLALLLLLRLLPESRPAARARLRGSLRELLR----RPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 243 FNYSEGVIGLFGLAGAAGALGARPAGGLADKGKSHLTTSAGLVLLLLSWAAIWYGHiSVLALIVGILVLDLTVQGVHITN 322
Cdd:COG2814  239 GLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAG-SLWLLLLALFLLGFGFGLLFPLL 317
                        330       340       350
                 ....*....|....*....|....*....|
gi 658549661 323 QTVIY-RVKPEARNRLTAGYMTSYFIGGAA 351
Cdd:COG2814  318 QALVAeLAPPEARGRASGLYNSAFFLGGPL 347
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
5-186 2.74e-18

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 85.87  E-value: 2.74e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661    5 TQGLSPALILLMSVATGLAVASNYYAQPlldTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTL 84
Cdd:TIGR00895  14 YQWRAIILSFLIMLMDGYDLAAMGFAAP---AISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSIL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   85 LAAGGMLITASSQSLTMMIVGTALTGL-FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGW 163
Cdd:TIGR00895  91 LFSVFTLLCALATNVTQLLILRFLAGLgLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170
                         170       180
                  ....*....|....*....|...
gi 658549661  164 RTVYWVASVLMVIMALALWRGLP 186
Cdd:TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLP 193
MFS_1 pfam07690
Major Facilitator Superfamily;
16-353 1.25e-17

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 83.24  E-value: 1.25e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   16 MSVATGLAVASNYYAQPLL-DTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITA 94
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALpLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   95 SSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVL 173
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGaGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  174 MVIMALALWRGLPKVKQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIGLF 253
Cdd:pfam07690 161 SLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  254 GLAGAAGALGARPAG-GLADK-GKSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHIT--NQTVIYRV 329
Cdd:pfam07690 241 LGLGGLLGAIGRLLLgRLSDRlGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPalNALVSDLA 320
                         330       340
                  ....*....|....*....|....
gi 658549661  330 KPEARNRLTAGYMTSYFIGGAAGS 353
Cdd:pfam07690 321 PKEERGTASGLYNTAGSLGGALGP 344
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
32-182 5.30e-09

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 57.23  E-value: 5.30e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:PRK11102  12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL 91
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 658549661 112 F----SVVAQILVplaATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALW 182
Cdd:PRK11102  92 AaaaaSVVINALM---RDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163
 
Name Accession Description Interval E-value
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
13-384 6.19e-71

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 227.05  E-value: 6.19e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  13 ILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLI 92
Cdd:cd17324    1 LLALALAAFAIGTTEYVIQGLLPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  93 TASSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVAS 171
Cdd:cd17324   81 AALAPSFALLLLARALAGLAhGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 172 VLMVIMALALWRGLPKVKQENHLNYPqlLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIG 251
Cdd:cd17324  161 VLALLAALLLWRLLPSLPPKKPGSLG--LLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVPGFSSSAIIG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 252 LFGLAGAAGALGARPAGGLADKGkSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIYRVKP 331
Cdd:cd17324  239 LLLLFGVAGVVGSPLAGRLADRG-GRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAP 317
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 658549661 332 EARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWW 384
Cdd:cd17324  318 EARGLASSLYLAAYNLGGALGAALGGLVLDHGGWAGVGWVGAALLLLALLLAL 370
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
4-351 1.56e-31

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 122.39  E-value: 1.56e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   4 TTQGLSPALILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMT 83
Cdd:COG2814    3 ATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  84 LLAAGGMLITASSQSLTMMIVGTALTGLFS-VVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGG 162
Cdd:COG2814   83 LLFALGSLLCALAPSLWLLLAARFLQGLGAgALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFG 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 163 WRTVYWVASVLMVIMALALWRGLPKVKQENHLNYPQLLASVFSlftqDKLLRTRALLGCFTFANFSILWTSMAFLLAAPP 242
Cdd:COG2814  163 WRWVFLVNAVLALLALLLLLRLLPESRPAARARLRGSLRELLR----RPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 243 FNYSEGVIGLFGLAGAAGALGARPAGGLADKGKSHLTTSAGLVLLLLSWAAIWYGHiSVLALIVGILVLDLTVQGVHITN 322
Cdd:COG2814  239 GLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAG-SLWLLLLALFLLGFGFGLLFPLL 317
                        330       340       350
                 ....*....|....*....|....*....|
gi 658549661 323 QTVIY-RVKPEARNRLTAGYMTSYFIGGAA 351
Cdd:COG2814  318 QALVAeLAPPEARGRASGLYNSAFFLGGPL 347
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
32-387 1.12e-20

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 92.64  E-value: 1.12e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:cd17325   17 PILPLYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 112 FS-VVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPK--V 188
Cdd:cd17325   97 ASaAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALLLLPEprP 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 189 KQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAfLLAAPPFNYSEGVI-GLFGLAGAAGALGARPA 267
Cdd:cd17325  177 PPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLP-LYAAELGGLSPAQIgLLFGAQGLASALSQPPA 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 268 GGLADKGKSHLTTSAGLVLLLLSWAAIWYGHiSVLALIVGILVLDLTVQGVHITNQTVI-YRVKPEARNRLTAGYMTSYF 346
Cdd:cd17325  256 GKLSDRIGRKPLILIGLLLSAVALLLLPLAT-SFWLLLLLLALLGLGLGLVFPATLALLaDIVPPEGRGTAMGLFNTAFS 334
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 658549661 347 IGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWWRGY 387
Cdd:cd17325  335 LGMVLGPLLGGFLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
5-186 2.74e-18

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 85.87  E-value: 2.74e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661    5 TQGLSPALILLMSVATGLAVASNYYAQPlldTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTL 84
Cdd:TIGR00895  14 YQWRAIILSFLIMLMDGYDLAAMGFAAP---AISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSIL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   85 LAAGGMLITASSQSLTMMIVGTALTGL-FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGW 163
Cdd:TIGR00895  91 LFSVFTLLCALATNVTQLLILRFLAGLgLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170
                         170       180
                  ....*....|....*....|...
gi 658549661  164 RTVYWVASVLMVIMALALWRGLP 186
Cdd:TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLP 193
MFS_1 pfam07690
Major Facilitator Superfamily;
16-353 1.25e-17

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 83.24  E-value: 1.25e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   16 MSVATGLAVASNYYAQPLL-DTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITA 94
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALpLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   95 SSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVL 173
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGaGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  174 MVIMALALWRGLPKVKQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIGLF 253
Cdd:pfam07690 161 SLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  254 GLAGAAGALGARPAG-GLADK-GKSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHIT--NQTVIYRV 329
Cdd:pfam07690 241 LGLGGLLGAIGRLLLgRLSDRlGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPalNALVSDLA 320
                         330       340
                  ....*....|....*....|....
gi 658549661  330 KPEARNRLTAGYMTSYFIGGAAGS 353
Cdd:pfam07690 321 PKEERGTASGLYNTAGSLGGALGP 344
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
13-238 4.88e-14

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 72.99  E-value: 4.88e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  13 ILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR-MLIVSMTLLAAGGML 91
Cdd:cd17320    1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRpVLLAGLLLFILASLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  92 ItASSQSLTMMIVGTALTGLF----SVVAQILVplaATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVY 167
Cdd:cd17320   81 C-ALASSIEQLLIARFLQGLGaaagSVVARAIV---RDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIF 156
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 658549661 168 WVASVLMVIMALALWRGLPK-VKQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLL 238
Cdd:cd17320  157 VFLALLGLLLLLLVLLFLPEtLPEEKRKPLLSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIY 228
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
13-385 6.94e-14

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 72.22  E-value: 6.94e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  13 ILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR-MLIVSMTLLAAGGML 91
Cdd:cd17474    1 LYAVFFATLLAVLGVSIVDPILPAIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKkVLLPGLLLFGIGGLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  92 ItASSQSLTMMIVGTALTGLfsvVAQILVPLAAT----LASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGgWRTVY 167
Cdd:cd17474   81 C-GLSDSFALLLAGRALQGI---GAAGLGPLALTligdLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLAAIS-WRYPF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 168 WVASVLMVIMALALWRGLPKVKQENHLNYPQLLASVFSLFTqDKLLRTRALLGCFTFANFSILWTSMAFLLAAPpFNYSE 247
Cdd:cd17474  156 FLLAALIPVAFLAILFLLPEPKEKAKSSSATKLRDLKKALR-GRGLLTFLVSAFLYFFLYFAFLTYLPFLLELL-YGISP 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 248 GVI--GLFGLAGAAGALGARPAGGLADKGKSHLTTSAGLVLLLLSWAAIWYGHisVLALIVGILVLDLTVQGVHIT--NQ 323
Cdd:cd17474  234 IIIglLFAGWSVLLALGSLFVGRLLKKRFGARRILVIGLLLYALSLLLLGFVP--SLALLLIAIVLFGLGLGLNLPllTT 311
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 658549661 324 TVIYRVKPEARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWWR 385
Cdd:cd17474  312 LVTELAPEEERGTASSLYNFVRFLGQAVGPLLFGLLLEIFGLSAPFLVGAAIALAAAVLLAL 373
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
18-181 8.63e-14

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 72.66  E-value: 8.63e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  18 VATGLAVASNYYAQPLLDTIARAFN---LSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITA 94
Cdd:cd06179    1 AALCLAYFAQLFGVTLPAAVLPFIVadlGPSSNSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  95 SSQSLTMMIVGTALTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLL--ASLGGWRTVYWVASV 172
Cdd:cd06179   81 TAKSVNMLIGGQALIGIGAGTQGLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGALveANAAGWRWIFYINAI 160

                 ....*....
gi 658549661 173 LMVIMALAL 181
Cdd:cd06179  161 FNALALILL 169
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
32-389 1.30e-13

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 71.45  E-value: 1.30e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:COG2223   26 VLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGI 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 112 FS-VVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQ 190
Cdd:COG2223  106 GGgGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAFLILGILLLVVAVLAWLFLRDPPA 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 191 ENHLNYPQLLASVFSLFTqDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIGLFGLAGAAGALGARPAGGL 270
Cdd:COG2223  186 GAAAAAKASLRDQLEALR-DPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDQFGLSAATAGLLAALFALLGALGRPLGGWL 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 271 ADKGKSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVH-ITNQTVIYRVKPEARNRLTAGYMTSYFIGG 349
Cdd:COG2223  265 SDRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLGLALGGGNgAVFALVPDIFPTKNAGAVYGLVGAAGGLGG 344
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 658549661 350 AAGSLISASAWQHAG-WSGVCAIGAIVATLNLLVWWRGYHR 389
Cdd:COG2223  345 FLGPLLFGALLDATGsYTAAFLVFAVLALVALVLTLLLYRR 385
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
32-182 8.76e-13

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 69.13  E-value: 8.76e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:COG2807   39 PLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGA 118
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 658549661 112 FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALW 182
Cdd:COG2807  119 GIAVGNVLLPGLIKRWFPDRVGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLALLLWL 189
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
12-385 1.46e-12

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 68.36  E-value: 1.46e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  12 LILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGML 91
Cdd:COG2271   11 ILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  92 ITASSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVA 170
Cdd:COG2271   91 LFGFATSFWQLLLLRFLLGLGeAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWRAAFLIL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 171 SVLMVIMALALWRGLpkvkqenhlnypqllasvfslftqdkllrtrallgcfTFANFSILWTSMAFLLAAPPF-----NY 245
Cdd:COG2271  171 GLPGLLLALLRFWLL-------------------------------------ALAYFLVYFALYGFLTWLPTYlvevrGL 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 246 SEGVIGLFGLAGAAGALGARPAG-GLADK--GKSHLTTSAGLVLLLLSWAAIWYGHiSVLALIVGILVLDLTVQGVHITN 322
Cdd:COG2271  214 SLAQAGLLLSLPFLAGIVGSLLGgWLSDRlgRRRKLVLAIGLLLAALALLLLALLP-SPALAIALLFLAGFGLGGAFGLL 292
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 658549661 323 QTVI-YRVKPEARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWWR 385
Cdd:COG2271  293 WALAaELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALL 356
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
11-182 2.99e-12

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 67.22  E-value: 2.99e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  11 ALILLMSVATglAVASNYYAqPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRML-IVSMTLLAAGG 89
Cdd:cd17323    2 FIISFLTFVV--TFGSSIYS-PALPQIAEDFHVSEEVANLGVSLFVLGFGLGPLIWAPLSELYGRRPVyLVSLFIFVIFQ 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  90 MLiTASSQSLTMMIVGTALTGLFSVVAQILVPLA-ATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYW 168
Cdd:cd17323   79 IG-CALAPNIAMLIILRFLQGFFGSSPLAIGAGTiADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQSLGWRWIFW 157
                        170
                 ....*....|....
gi 658549661 169 vasvLMVIMALALW 182
Cdd:cd17323  158 ----FLAIISGFCL 167
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
34-181 5.41e-11

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 63.36  E-value: 5.41e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  34 LDTIARAFNLSASS--AGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:cd17315   20 LLYIAKDLGFGLSTslQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGL 99
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 658549661 112 FSVVAQILVPL-AATLASPEKRGKVVGTIMSGLLLGILLArTVAGLLASL---GGWRTVYWVASVLMVIMALAL 181
Cdd:cd17315  100 GVGLASVLVPLyISEIAPAKIRGALGTLNQLMITFGILLA-YLLGLALSLsppGWWRLMFALAAVPALLQLLLM 172
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
11-179 8.55e-11

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 62.96  E-value: 8.55e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  11 ALILLMSVATGLAVAsnyyaqplLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGM 90
Cdd:cd17321    4 AVFLAALDVTIVNVA--------LPTIARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLAS 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  91 LITASSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWV 169
Cdd:cd17321   76 LLCALAPSLAFLIAARALQGIGaAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLELFGWRWIFLI 155
                        170
                 ....*....|
gi 658549661 170 ASVLMVIMAL 179
Cdd:cd17321  156 NVPIGLVALL 165
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
12-243 1.41e-10

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 61.75  E-value: 1.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  12 LILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGML 91
Cdd:COG0477   15 ALLALALGTFLEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  92 ITASSQSLTMMIVGTALTGLF-SVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVA 170
Cdd:COG0477   95 LCGLAPSPELLIAARALQGIGaGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWRWIFLIN 174
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 658549661 171 SVLMVIMALALWRGLPKVKQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPF 243
Cdd:COG0477  175 APLGLLALVLRLRLPESRGLLLALLALALAALLLAALALALLALLLLLLLLLLALLALLLAGAALLLLLALLL 247
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
32-180 1.71e-10

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 61.82  E-value: 1.71e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGl 111
Cdd:cd17504   17 PALPTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQG- 95
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 658549661 112 fsvVAQILVPLAATLA----SPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALA 180
Cdd:cd17504   96 ---IGGAVFPLAFALVreefPPERVPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAPVAVLLAAL 165
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
11-185 2.61e-10

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 61.44  E-value: 2.61e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  11 ALILLMSVATGLAVASNYYAQPLLdtIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGM 90
Cdd:cd17325  202 LALFLAIFVLAFAFGALEPFLPLY--AAELGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVAL 279
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  91 LITASSQSLTMMIVGTALTGL-FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWV 169
Cdd:cd17325  280 LLLPLATSFWLLLLLLALLGLgLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLA 359
                        170
                 ....*....|....*.
gi 658549661 170 ASVLMVIMALALWRGL 185
Cdd:cd17325  360 AAALLLLAAVLFLLLR 375
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
31-382 2.76e-10

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 61.29  E-value: 2.76e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  31 QPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTG 110
Cdd:cd06174   16 SPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 111 LFSVVAQILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLAS--LGGWRTVYWVASVLMVIMALALWRGLPK 187
Cdd:cd06174   96 LGSGLIDPAVLaLIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASslGFGWRAVFLIAAALALLAAILLLLVVPD 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 188 VKQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNY----SEGVIGLFGLAGAAGALG 263
Cdd:cd06174  176 PPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLgglsVAVAGLLLSLFGLAGALG 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 264 ARPAGGLADKGKSHLTTS-AGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIYRVKPEARNRLTAGYM 342
Cdd:cd06174  256 SLLLGLLSDRLIGRKPLLlIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLN 335
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 658549661 343 TSYFIGGAAGSLISASAW-QHAGWSGVCAIGAIVATLNLLV 382
Cdd:cd06174  336 TFGFLGGAIGPLLAGFLLaATFGLTGAFLVLAVLLLLAAIL 376
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
33-230 1.49e-09

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 59.24  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  33 LLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL- 111
Cdd:cd17371   21 VLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGLg 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 112 FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLG----GWRTVYWVAsVLMVIMALALWRGLP- 186
Cdd:cd17371  101 FGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFPLLppeiAWRVLFLLG-ALPALLVLFIRRFVKe 179
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 658549661 187 ------KVKQENHLNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSIL 230
Cdd:cd17371  180 ppqwqaARAARRHFADRPSLRELFSPPLLRTTLLASLLATGALGGYYGIT 229
Sugar_tr pfam00083
Sugar (and other) transporter;
43-182 3.45e-09

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 58.05  E-value: 3.45e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   43 LSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRM-LIVSMTLLAAGGMLITAS--SQSLTMMIVGTALTGLFSVVAQIL 119
Cdd:pfam00083  43 ALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKsLLIANVLFVIGAVLQGAAkgKWSVYQLIVGRVLVGIGVGGASVL 122
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 658549661  120 VPL-AATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLA---SLGGWRTVYWVASVLMVIMALALW 182
Cdd:pfam00083 123 APMyISEIAPKKLRGALGSLYQLAITFGILLAYIFGLGLNktsNSDGWRIPLGLQLVPALLLIIGLL 189
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
32-182 5.30e-09

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 57.23  E-value: 5.30e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:PRK11102  12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL 91
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 658549661 112 F----SVVAQILVplaATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALW 182
Cdd:PRK11102  92 AaaaaSVVINALM---RDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
1-193 6.36e-09

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 57.17  E-value: 6.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   1 MTKTTQGLSPALILLMSVATGLAVASNyyaQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIV 80
Cdd:COG0738    1 MSKKNYRRALIAIYLLFFLWGFATALW---GPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  81 SMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASL 160
Cdd:COG0738   78 LGLLLMALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRLNLLHAFFSLGALLGPLLGGLLILL 157
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 658549661 161 G---GWRTVYWVASVLMVIMALALWR-GLPKVKQENH 193
Cdd:COG0738  158 GlslSWHLPYLILAVLLLLLALLFLRsKLPEIEEEEE 194
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
9-183 1.17e-08

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 56.47  E-value: 1.17e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   9 SPALILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAG 88
Cdd:cd06173  207 SPLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGL 286
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  89 GMLITASSQSLTMMIVGTALTGLFSVVAQI-LVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVY 167
Cdd:cd06173  287 ALLVLGLSPSLWLLLAALFLLGLAGGLFNVpLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALGLSAVF 366
                        170
                 ....*....|....*.
gi 658549661 168 WVASVLMVIMALALWR 183
Cdd:cd06173  367 LLAGALLLLAALLLLL 382
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
37-190 1.31e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 56.03  E-value: 1.31e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  37 IARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR--MLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSV 114
Cdd:COG2271  207 LVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLG 286
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 658549661 115 VAQILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQ 190
Cdd:COG2271  287 GAFGLLWaLAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLLLRETRK 363
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
43-150 2.07e-08

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 55.72  E-value: 2.07e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  43 LSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQ-SLTMMIVGTALTGLFSVVAQILVP 121
Cdd:cd17356   42 PSSSRQGLIVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIYIIGAIIQVAAIgKWYQLIVGRIIAGLGVGFASVLVP 121
                         90       100       110
                 ....*....|....*....|....*....|
gi 658549661 122 L-AATLASPEKRGKVVGTIMSGLLLGILLA 150
Cdd:cd17356  122 VyQSEVAPKHIRGTLVSLYQLAITIGILVA 151
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
36-382 4.46e-08

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 54.51  E-value: 4.46e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  36 TIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTG--LFS 113
Cdd:cd17365   24 ALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGlgLGA 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 114 VVAQILVpLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLpkvkqenh 193
Cdd:cd17365  104 AMPNAIT-LVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGGVPPLILLPLLRGTL-------- 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 194 lnypqllasvfslftqdkllrtrALLGCFTFANFSI--LWTSMAFLLAAPPFNYSEGVIGLFGLAGAAGALGARPAGgLA 271
Cdd:cd17365  175 -----------------------LLWVTFFMGLLLVylLNSWLPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGW-LA 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 272 DKGKSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIYRVKPEARNRLTAGYMTSY-FIGGA 350
Cdd:cd17365  231 DRFGPKRVLALFFALGAVSLALLGVSPASLVLLYVLVFLAGACVNGAQVGLYALAARFYPTEVRATGVGWALGVgRLGAI 310
                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 658549661 351 AGSLISASA----WQHAGWSGVCAIGAIVATLNLLV 382
Cdd:cd17365  311 LGPLLGGLLlaagLGPESVFLALAIPAALGALAVLL 346
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
37-182 4.89e-08

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 54.58  E-value: 4.89e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  37 IARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFER-RMLIVSMTLLaaGGM-LITASSQSLTMMIVGTALTGLFSV 114
Cdd:PRK11551  41 MAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRkRILIVSVALF--GLFsLATAQAWDFPSLLVARLLTGVGLG 118
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 658549661 115 VA-QILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASV--LMVIMALALW 182
Cdd:PRK11551 119 GAlPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVgpLLLVPLLMRW 189
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
15-182 8.68e-08

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 53.70  E-value: 8.68e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  15 LMSVATGLAVASnYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITA 94
Cdd:cd17370  204 LYLLAVALFALG-NFSFAFLILRAQELGLSAALIPLLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFA 282
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  95 SSQSLTMMIVGTALTGLFSVVAQILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVL 173
Cdd:cd17370  283 LGSSLWLLLLGFILWGLYMGAQESIERaAVADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYLWDLISPSAAFLFSAVL 362

                 ....*....
gi 658549661 174 MVIMALALW 182
Cdd:cd17370  363 ALIALLLLL 371
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
17-185 1.34e-07

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 53.01  E-value: 1.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  17 SVATGLAVASNYYAQPLLDTIAR-AFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITAS 95
Cdd:cd17475    1 ATLAQAAASLVAQGIPALAPFLQeDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMAL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  96 SQSLTMMIVGTALTGLFSVVAQILVPLA-ATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLM 174
Cdd:cd17475   81 VGSYPVLLVLLFLVGAGYGSVQPGGGRAiMRWFPPRERGLAMGIRQTGVPLGGALAAALLPPLALHYGWRAAFVVAGLVS 160
                        170
                 ....*....|.
gi 658549661 175 VIMALALWRGL 185
Cdd:cd17475  161 ILAAVLFWLFY 171
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
41-183 1.42e-07

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 53.13  E-value: 1.42e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  41 FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILV 120
Cdd:cd17362   34 YNLSSLQSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVGIGLAMHAA 113
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 658549661 121 PL-AATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASL-GGWRTVYWVASVLMVIMALALWR 183
Cdd:cd17362  114 PVyIAETSPSHIRGLLVSLKELFIVLGILLGYVSGYAFADVvGGWRYMYGLAAPPALLLGIGMWF 178
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
32-232 1.73e-07

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 52.61  E-value: 1.73e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLgyaAGLLFLVPLG---DMFERRMLIVSMTLLAAG-GMLITASSQSLTMMIVGTA 107
Cdd:cd17490   17 PFLSPYAESLGASLSMIGIILGAYGI---SQMLLRIPLGilsDRIGKRKLFIIIGLLFTVlASLIMILFPSPWGLLIARF 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 108 LTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVImALALWRGLPK 187
Cdd:cd17490   94 LSGIAAATWVSFTVLYASYFPPDEAAKAMGLINLVNNLGQLIAFLIGGLIAEHFGMRAPFLLAALAGVL-GFILSLFIKE 172
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 658549661 188 VKQENHlNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWT 232
Cdd:cd17490  173 ERREKK-PVLTELKELLSVLKDKKLLFFSLLAILQQMITFSTTFG 216
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
32-182 1.74e-07

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 52.64  E-value: 1.74e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMF-ERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTG 110
Cdd:cd17341   20 PLGPVIRDDLGLSTSQIGLLVAIPVLAGALLRLPYGFLCDRFgGRRVFIASLLLLLIPLLALALAVSSYWGLLVLGFLLG 99
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 658549661 111 LFSVVAQILVPLAATLASPEKRGKVVGTI----MSGLLLGILLARTVAGLLASLG---GWRTVYWVASVLMVIMALALW 182
Cdd:cd17341  100 FAGANFASGQPWASFWFPKEKIGGAAGGIagagNMGVAVSQLLAPLIAGAIVFDGgfvGWRNAFFVPGILLAIAAVLVL 178
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
23-182 1.79e-07

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 53.11  E-value: 1.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   23 AVASNYYAQP---LLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR---MLIVSMTLLAAGGMLITASS 96
Cdd:TIGR00879  45 GVIGGALALPafeFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKkslLIIALLFVIGAILMGLAAFA 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   97 QSLTMMIVGTALTGLFSVVAQILVPL-AATLASPEKRGKVVGTIMSGLLLGILLA---RTVAGLLASLGGWRTVYWVASV 172
Cdd:TIGR00879 125 LSVEMLIVGRVLLGIGVGIASALVPMyLSEIAPKALRGALTSLYQLAITFGILVAygfGSGKVSLNNTLGWRIPLGLQLI 204
                         170
                  ....*....|
gi 658549661  173 LMVIMALALW 182
Cdd:TIGR00879 205 PAGLLFLGLF 214
PRK03545 PRK03545
putative arabinose transporter; Provisional
33-192 1.91e-07

putative arabinose transporter; Provisional


Pssm-ID: 179591 [Multi-domain]  Cd Length: 390  Bit Score: 52.59  E-value: 1.91e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  33 LLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIV---GTALT 109
Cdd:PRK03545  31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLIsriGIAFA 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 110 glFSVVAQILVPLAATLASPEKRGKVVGTIMSG----LLLGILLARTVAGLLaslgGWRTVYWVASVLMVIMALALWRGL 185
Cdd:PRK03545 111 --HAIFWSITASLAIRVAPAGKKAQALSLLATGtalaMVLGLPLGRVIGQYL----GWRTTFLAIGGGALITLLLLIKLL 184

                 ....*..
gi 658549661 186 PKVKQEN 192
Cdd:PRK03545 185 PLLPSEH 191
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
33-169 2.75e-07

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 51.80  E-value: 2.75e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  33 LLDTIARAFNlSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL- 111
Cdd:cd17502   18 ALPTIVAEFG-GLSLVSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIg 96
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 658549661 112 ---FSVVAQILVplaATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWV 169
Cdd:cd17502   97 gggLMSLAFIII---ADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTDHLSWRWCFYI 154
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
41-191 4.18e-07

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 51.39  E-value: 4.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  41 FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLF-SVVAQIL 119
Cdd:COG0738  241 LGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLALLAPGPWLALIGLALVGLGlSLMFPTI 320
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 658549661 120 VPLAATlASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQE 191
Cdd:COG0738  321 FSLALD-GLGKRTAAAVSAVLIMGIVGGAIGPPLIGFLADAFGLRAAFLVPLVCYLLILLLALALKRKRRKK 391
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
33-188 5.94e-07

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 51.03  E-value: 5.94e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  33 LLDTIARAFNLSASSAGFIVTAAQLGYAaglLFLVPLGDMFE----RRMLIVSMTLLAAGGMLiTASSQSLTMMIVGTAL 108
Cdd:cd17319   25 AAPTIMKDLGLSPTQYGLIASAFFLGYA---LFQVPGGWLLDrfgaRKVLAVSMLLWSLFTAL-TGFATSLTSLYVLRFL 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 109 TGLFSvvAQILVPLAATLAS---PEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGL 185
Cdd:cd17319  101 LGVAE--AGFFPGAIKALAEwfpARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFIIEGLLGLLLAVLWWFYL 178

                 ...
gi 658549661 186 PKV 188
Cdd:cd17319  179 RQV 181
emrD PRK11652
multidrug transporter EmrD;
32-186 6.00e-07

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 51.06  E-value: 6.00e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR-MLIVSMTLLAAGGMLItASSQSLTMMIVGTALTG 110
Cdd:PRK11652  29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRpVILVGMSIFILGTLVA-LFAHSLTVLIAASAIQG 107
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 658549661 111 LFSVVAQILV-PLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLP 186
Cdd:PRK11652 108 LGTGVGGVMArTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMP 184
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
34-181 7.17e-07

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 50.65  E-value: 7.17e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  34 LDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFs 113
Cdd:cd17503   19 LPTIMGDLGASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFG- 97
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 658549661 114 vvAQILVPLAATLA----SPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVaSVLMVIMALAL 181
Cdd:cd17503   98 --GGVLIPLAQTILlriyPPEKRGAAMGLVGLVILLAPAIGPTLGGWLTDNLSWRWIFYI-NLPIGILALLL 166
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
41-184 9.58e-07

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 50.26  E-value: 9.58e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  41 FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL-FSVVAQIL 119
Cdd:cd17473  228 GGGSAALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGLgFGLLLPTL 307
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 658549661 120 VPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGG--WRTVYWVASVLMVIMALALWRG 184
Cdd:cd17473  308 NSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLGPLVNLTGglSGAFLILGVLALVLAIVLLLLR 374
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
34-182 1.46e-06

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 49.89  E-value: 1.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  34 LDTIARAFNLSASSAGFIVTAAQL---------GYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIV 104
Cdd:cd17365   13 FDLAVMGFVAPALAQDWGLSPAQLgpvgsaalfGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLAL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 105 GTALT--GLFSVVAQILVpLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALW 182
Cdd:cd17365   93 LRFLTglGLGAAMPNAIT-LVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGGVPPLILLPLLR 171
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
64-384 2.08e-06

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 49.14  E-value: 2.08e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  64 LFLVPLG---DMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILVpLAATLASPEKRGKVVGTIm 140
Cdd:cd17472   47 IFQIPFGllsDRIGRKPVILFGLLLFIAGSLLAAYATSIYGLILGRALQGSGAISSVVMA-LLADLTREENRTKAMALI- 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 141 sGLLLGI--LLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKqenhlNYPQLLASVFSLFTqdKLLRTRAL 218
Cdd:cd17472  125 -GASIGIafAISMVLGPLLAAHLGVSGLFLITAILSLVSLLILLFFVPDPP-----KIVQISEKEKKKLK--KLLKNKRL 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 219 LgCFTFANFSILWTSMAFLLAAP-----PFNYSEGVIGLFGLAGAAGALGARPAGGLADK-GKSHLTTSAGLVLLLLSWA 292
Cdd:cd17472  197 L-RLDFSIFILHFVLMAFFYILPllltqLGGGKGQLWKVYLPAILIGFILMVPFVIYAEKkGKMKQVFVSSILLIAVGFL 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 293 AIWYGHISVLALIVGILVLDLTVQGVHITNQTVIYR-VKPEARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAI 371
Cdd:cd17472  276 LLLFAATSLWLLIIGLIIFFIGFNLLEALLPSLVSKiAPKEYRGTAMGIYNTSQFLGSFLGGALGGLLWGLLGYSSVFLT 355
                        330
                 ....*....|...
gi 658549661 372 GAIVATLNLLVWW 384
Cdd:cd17472  356 ILILALLWLLVSF 368
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
44-385 2.11e-06

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 49.15  E-value: 2.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  44 SASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR-MLIVSMTLLAAGGMLITASSQS--------LTMMIVGTALTGLFSV 114
Cdd:cd06173   32 SALLVGLVLAAFFLPFLLFSPFAGVLADRFDRRrLLILADLLRALLAAVLALLALLgslslwllLVLAFLLGIASAFFGP 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 115 VAQILVPLaatLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALW---RGLPKVKQE 191
Cdd:cd06173  112 ARQALLPE---LVPKEQLVRANALNSLATQLARIIGPALGGLLVALLGPGGAFAINALSFLLSALLLLfirRPPPAAPGE 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 192 NHLNYPQLLASVFSLFTQDKLLRtRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIGLFGLAGAAGALGARPAGGLA 271
Cdd:cd06173  189 SSSLLLRDLREGLRYLRRSPLLR-LLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVGALLGALLLGRL 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 272 DKGKSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIY-RVKPEARNRLTAGYMTSYFIGGA 350
Cdd:cd06173  268 SKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQlRVPDELRGRVFSVYNALNSGAMP 347
                        330       340       350
                 ....*....|....*....|....*....|....*
gi 658549661 351 AGSLISASAWQHAGWSGVCAIGAIVATLNLLVWWR 385
Cdd:cd06173  348 LGALLAGLLADALGLSAVFLLAGALLLLAALLLLL 382
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
8-182 9.41e-06

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 47.57  E-value: 9.41e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   8 LSPALILLMSVATGLAVASNYYAQP-LLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLA 86
Cdd:cd17358    2 LATFVANLGSFSFGIAVGWSSPALPsLMSDNSLSLPLTVAQFSWFGSLLTLGALIGALLSGKLADRIGRKRTLLISAIPC 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  87 AGGMLITASSQSLTMMIVGTALT----GLFSVVAQILVplaATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLAslgg 162
Cdd:cd17358   82 ILGWLLIAFAKDVWMLYLGRFLAgfggGAASVVVPVYI---AEIAPKNVRGALGSLNQLLVNIGILLGYVLGSFLP---- 154
                        170       180
                 ....*....|....*....|
gi 658549661 163 WRTVYWVASVLMVIMALALW 182
Cdd:cd17358  155 WRTLALIGAIPPVVFLILLF 174
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
40-182 1.06e-05

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 47.20  E-value: 1.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  40 AFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL-FSVVAQI 118
Cdd:cd17489  221 AAERGISNAGLFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLgFGLLFPA 300
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 658549661 119 LVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALW 182
Cdd:cd17489  301 LQALAVDLVPPHRRGAANGTFFIFFDLGIGLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYI 364
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
41-185 1.33e-05

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 46.83  E-value: 1.33e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  41 FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLF-SVVAQIL 119
Cdd:cd17316   31 LGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGiGGEYPGA 110
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 120 VPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLG----GWRTVYWVASVLMVIMALALWRGL 185
Cdd:cd17316  111 STYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLLsgdwGWRILFLIGALPALLALLLRRRTL 180
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
43-186 1.63e-05

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 46.53  E-value: 1.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  43 LSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQIL-VP 121
Cdd:cd06180   31 LSYAQAGWIATANYAGYLVGALLASFLRRRGRARRLIRGGLLLTVLLLAAMALTSGFAALLALRFLAGAASAFVFVFgSN 110
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 658549661 122 LAATLASPEKRGKVVGTIMSGLLLGILL-ARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLP 186
Cdd:cd06180  111 LVLHHATAAGRGHLIGLLFAGVGLGIALsGLLVPAGLGGGLSWRAGWLALALLSAVLLLLSFLLLR 176
PRK03893 PRK03893
putative sialic acid transporter; Provisional
34-186 1.81e-05

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 46.61  E-value: 1.81e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  34 LDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMM-----IVGTAL 108
Cdd:PRK03893  43 LTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLfiarlVIGMGM 122
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 658549661 109 TGLFSVVAQILVplaaTLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVAsVLMVIMALALWRGLP 186
Cdd:PRK03893 123 AGEYGSSATYVI----ESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG-ILPIIFALWLRKNLP 195
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
16-384 1.87e-05

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 46.43  E-value: 1.87e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  16 MSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITAS 95
Cdd:cd17489    1 ILLANFFFFLSFYLLLPVLPLYAHDLGGSEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  96 SQSLTMMIVGTALTGL-FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLM 174
Cdd:cd17489   81 ATSVALLLVLRLIHGIgWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 175 VImALALWRGLPKVKQENHLNyPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSegviGLFG 254
Cdd:cd17489  161 LL-ALLLVFLVKDPPPVAAEE-AEAGTRAFRRLVEKKVLPPALILFLASIAYGAISTFLPLYAAERGISNAG----LFFT 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 255 LAGAAGALGARPAGGLADKGKSHLTTSAGLVLLLLSWAAIWYGHISVLALIVGILvLDLTVQGVHITNQTVIY-RVKPEA 333
Cdd:cd17489  235 VYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVL-YGLGFGLLFPALQALAVdLVPPHR 313
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 658549661 334 RNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVWW 384
Cdd:cd17489  314 RGAANGTFFIFFDLGIGLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYI 364
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
10-182 2.01e-05

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 46.11  E-value: 2.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  10 PALILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGG 89
Cdd:cd17355    2 WVVLAVTFLILILSWGIRYYFGVFIIPIIAEFGWSRAVISLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  90 MLITASSQSLTMMIVGTALTGLFSVVAqILVPLAATLAS---PEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTV 166
Cdd:cd17355   82 LVLLALATSLWQLYLLWGLLGGGGAGT-LAAVAFATVAAwwfERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGWRTA 160
                        170
                 ....*....|....*.
gi 658549661 167 YWVASVLMVIMALALW 182
Cdd:cd17355  161 LLVLALLALLVLVPVL 176
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
32-188 3.21e-05

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 45.68  E-value: 3.21e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAaqlgYAAGLLFLVP----LGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTA 107
Cdd:cd17390   17 PLLSTHIRSLGASPTVIGLIGSV----YGALQLFSSPlvgsWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLSRI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 108 LTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASL-GGWRTVYWVASVLMVIMALALWRGLP 186
Cdd:cd17390   93 PLGIFKHTQSLCKAYLSDLVSEQERSRVLGRFNAASSLGFILGPVVGGHLAETdGGFYYVALLCSAIFILNAGLVWFLLS 172

                 ..
gi 658549661 187 KV 188
Cdd:cd17390  173 KL 174
MFS_NIMT_CynX_like cd17339
2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator ...
32-182 6.74e-05

2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340897 [Multi-domain]  Cd Length: 374  Bit Score: 44.49  E-value: 6.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMF-ERRMLIVSMTLLAAGgmLITASSQSLTMMIVGTALTG 110
Cdd:cd17339   20 PLLPEIRDDLGLSASQAGLLTTLPLLCFAVFSPLAPRLARRFgLERTLLLALLLLAAG--ILLRSLGGIALLFLGTALAG 97
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 658549661 111 LFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLAS--LGGWRTVYWVASVLMVImALALW 182
Cdd:cd17339   98 AGIAVGNVLLPSLIKRDFPRRVGLMTGLYTTSMNLGAALASGLSVPLAQalGGGWRGALAIWALPALL-ALLIW 170
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
40-191 7.29e-05

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 44.49  E-value: 7.29e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  40 AFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMF-ERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQI 118
Cdd:COG2223  235 QFGLSAATAGLLAALFALLGALGRPLGGWLSDRIgGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLGLALGGGNG 314
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 658549661 119 LVP-LAATLASPEKRGKVVGTI-MSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQE 191
Cdd:COG2223  315 AVFaLVPDIFPTKNAGAVYGLVgAAGGLGGFLGPLLFGALLDATGSYTAAFLVFAVLALVALVLTLLLYRRPRRA 389
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
69-229 7.66e-05

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 44.56  E-value: 7.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  69 LGDMFERRmlivSMTLLAAGGMLITASSQSLT----MMIVGTALTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLL 144
Cdd:cd17391   59 LADRYGRK----PMLLRASLGMAIVIGLMAFVtnvwQLLILRLLQGVFSGYVPNATALIASQTPKEKSGWALGTLSTGVV 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 145 LGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPK----VKQENHLNYPQLLASVFSLFTQDKLLRTRALLg 220
Cdd:cd17391  135 AGTLIGPLLGGFLADLFGIRNVFFITGGLLFLAFLLTLFFVKEdfkpVEKKKMVSTKEVWNSVPNPSLLISLFVTTFII- 213

                 ....*....
gi 658549661 221 cfTFANFSI 229
Cdd:cd17391  214 --QLANQSI 220
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
41-181 8.63e-05

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 44.18  E-value: 8.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  41 FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILV 120
Cdd:cd17360   30 VVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGVGIASMTV 109
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 658549661 121 PL-AATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASL-GGWRTVYWVASVLMVIMALAL 181
Cdd:cd17360  110 PLyIAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYLpGGWRWMLGLAAVPAVLQFIGL 172
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
40-183 1.08e-04

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 43.71  E-value: 1.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  40 AFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMF---ERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVA 116
Cdd:cd17319  209 ARGFSLKQVGLLAAIPFLAGAIGMILGGRLSDRLlrgARRLVIIIGLLLAAVGLLLAYLTTSPVVAVILLSLAGFGIGAA 288
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 658549661 117 QILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAG-LLASLGGWRTVYWVASVLMVIMALALWR 183
Cdd:cd17319  289 SPVFWsLPADLLPGEAAATAGGLINSGGNLGGFVAPLLIGyLVDATGSYTAAFLFLAAVALLAALLVLL 357
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
11-183 1.15e-04

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 43.75  E-value: 1.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  11 ALILLMSVATGLAVASNYYAQPLLdtIARAFNLSASSAGFIVTAAQLGYAAGLLFLVP-LGDMF-ERRMLIVSMTLLAAG 88
Cdd:cd17331  210 AFLLLVKLLSGLPIGMFQSMFSLV--AMDFFGLTPEENGYLMSYAGVLGMVVQGLLVGpLTKRFgERSLLKLSVALLAIG 287
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  89 GMLITASSQSLTMMIVGTALTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYW 168
Cdd:cd17331  288 YLLLAFVTTVWQLLVLLLPLVIGGSVLYTVITSLLTKAVPPEDTGTALGLSHALFSLVRTVSPTIGGALLQAYGFPSFGL 367
                        170
                 ....*....|....*
gi 658549661 169 VASVLMVIMALALWR 183
Cdd:cd17331  368 LGAAINGLLTVYLLL 382
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
36-185 1.41e-04

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 43.42  E-value: 1.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  36 TIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVV 115
Cdd:cd17312   28 PIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLFQSM 107
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 658549661 116 AqiLVPLAATLA---SPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGL 185
Cdd:cd17312  108 G--WPPCVKLLGnwfSKKERGTVYGIWSTSHNFGGILAPILAASLASYYGWRAAFLVPGIVGLVVAIILFFFL 178
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
41-193 1.50e-04

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 43.52  E-value: 1.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   41 FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILV 120
Cdd:TIGR00881  25 IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPC 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  121 PLAAT-LASPEKRGKVVGTIMSGLLL-GILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWR---------GLPKVK 189
Cdd:TIGR00881 105 GRTVTkWFSRSERGTWVSFWNCSHNVgGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLllrdspqscGLPPAE 184

                  ....
gi 658549661  190 QENH 193
Cdd:TIGR00881 185 EMPN 188
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
12-384 2.59e-04

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 42.95  E-value: 2.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  12 LILLMSVATGLAVAsnyyaqPLLDTIARAFNL-SASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGM 90
Cdd:cd17473    6 LASTLTVMAGAAIA------PALPAIAQHFVPnSELLVPLLLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  91 LITASSQSLTMMIVGTALTGLFS-VVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGgWRT---V 166
Cdd:cd17473   80 VAGLFLDSLYALLASRALLGIGVaGIMTLATALIGDYFEGEERAKMLGLQSAAMSLGGVVFLLLGGALAEIG-WRApflV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 167 YWVASVLMVIMALALWRglPKVKQENHLNYPQLLASVFSLftqdKLLRTRALLGCFTFANFSILWTSMAFLLAAPpFNYS 246
Cdd:cd17473  159 YLLALPVLILVLLFLPE--PARKSKSAASPGAATAAALPW----KRVLPIYFLAFLAMLLFYVIPIQLPFLLQER-GGGS 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 247 EGVIGLFGLAGAAGALGARPAGGLADKGKSHLTTSA------GLVLLLLSWAAIWYGHISVLALI---VGILVldltvqg 317
Cdd:cd17473  232 AALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLAigfalmALGFLLLALASGLWVVLLGAILAglgFGLLL------- 304
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 658549661 318 vHITNQTVIYRVKPEARNRLTAGYMTSYFIGGAAGSLIS-ASAWQHAGWSGVCAIGAIVATLNLLVWW 384
Cdd:cd17473  305 -PTLNSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLgPLVNLTGGLSGAFLILGVLALVLAIVLL 371
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
32-190 2.68e-04

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 42.57  E-value: 2.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:cd17330   20 PFYVREFNKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGL 99
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 658549661 112 FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQ 190
Cdd:cd17330  100 TGGNVSVAQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLVAAALALLNLVLVLFFLPPLRR 178
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
32-193 3.44e-04

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 42.16  E-value: 3.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL 111
Cdd:cd17478   17 ALLPLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVALAGI 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 112 FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQE 191
Cdd:cd17478   97 GSAAFHPEGARLASQAAGGRRGLAMSIFSVGGNLGFALGPLIAAALVALFGGLGLLILLIIPGLAVALLLLRLRPLKKPE 176

                 ..
gi 658549661 192 NH 193
Cdd:cd17478  177 AK 178
nepI PRK10213
purine ribonucleoside efflux pump NepI;
33-191 3.60e-04

purine ribonucleoside efflux pump NepI;


Pssm-ID: 182309 [Multi-domain]  Cd Length: 394  Bit Score: 42.21  E-value: 3.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  33 LLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL- 111
Cdd:PRK10213  42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLa 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 112 FSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQE 191
Cdd:PRK10213 122 LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE 201
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
12-196 5.65e-04

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 41.98  E-value: 5.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   12 LILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGML 91
Cdd:TIGR00711   3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   92 ITASSQSLTMMIVGTALTGlfsVVAQILVPLAATL----ASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVY 167
Cdd:TIGR00711  83 LCGVAPNLELMIIFRVIQG---FGGGPLIPLSFSTllniYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIF 159
                         170       180
                  ....*....|....*....|....*....
gi 658549661  168 WVASVLMVIMALALWRGLPKVKQENHLNY 196
Cdd:TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPAASENF 188
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
33-180 1.09e-03

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 40.71  E-value: 1.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  33 LLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMF-ERRMLIVSMTLLAAGGmLITASSQSLTMMIVGTALTGL 111
Cdd:cd17476   20 ILPIIGDSFGTSPNQLSWLAASYSLTVGTFILIFGRLGDIYgHKKMFVIGSFWFAIWS-LIAGFSPNFIFFIICRALQGL 98
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 658549661 112 fsvVAQILVP-----LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALA 180
Cdd:cd17476   99 ---GPAFLLPnamalLGRTYPPGPRKNIVFSLFGATAPLGFALGGVFGGLFAQLAWWPWIFWFLAILAAIVAVA 169
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
75-191 2.29e-03

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 39.84  E-value: 2.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  75 RRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGL-FSVVAQI--LVPLAATLASPEKRGKVVGTIMSGLLLGILLAR 151
Cdd:cd17471   63 KPLILLALLAGALGYLLFAFLRNYWVLLLVGVVLLSLgAAAFPQLfaLAREYADRSSGRDATLFNSVLRAAFSLAWVIGP 142
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 658549661 152 TVAGLLASLGGWRTVYWVASVLMVIMALALWRGLPKVKQE 191
Cdd:cd17471  143 PLAFLLLDVLGFTGLFLLAALLYLVVALLVLFLLPSVKPP 182
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
29-181 4.30e-03

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 39.09  E-value: 4.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  29 YAQPLLDTIARA----FNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIV 104
Cdd:cd17433   20 YSSPAIPSLQRIadpaLRLDDAAASWFGSVVTLGAAAGGVLGGWIVDRAGRKLSLMLCSVPFIAGFTVITAAQNVWMLYV 99
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 658549661 105 GTALTGLFSVVAQILVPL-AATLASPEKRGKVVGTIMSGLLLGILLArTVAGLLASlggWRTVYWVASVLMVIMALAL 181
Cdd:cd17433  100 GRLLTGLASGVTSLVVPVyISEIAHPRVRGTLGSCVQLMVVIGIMGA-YLAGLVLD---WRWLAVLGSIPPTLMLLLM 173
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
18-383 5.43e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 38.69  E-value: 5.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  18 VATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQ 97
Cdd:cd17477    3 LSVALLGLGSGLLLPLLSLRLEREGVSTALIGLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTD 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  98 S-----LTMMIVGTALTGLFsVVAQILVplaATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGwrTVYWVASV 172
Cdd:cd17477   83 SpwvwfLLRFVMGIGLAGLF-VVSESWL---NALATNENRGRVLGLYSTVLGLGFALGPLLLALVGTAGA--LPFLIAAV 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 173 LM---VIMALALWRGLPKVKQENHLNYPQLLASVFSlftqdkllrtrALLGCFTFANFSILWTSMAFLLAAPpFNYSEGV 249
Cdd:cd17477  157 LLllaLVPLLLTRRAAPEIEEAESISLRRLLRIAPL-----------ALLGAFVAGFLEGAFYSLLPLYGLR-LGLSVAQ 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 250 IGLFGLAGAAGALGARPAG-GLADK-GKSHLTTSAGLVLLLLSwAAIWYGHISVLALIVGILVLDLTVQGVHITNQTVIY 327
Cdd:cd17477  225 AALLLAAFVLGGLLLQWPLgWLADRfDRRRVLLGCALLGALAA-LLLPLVPGLPLALLVLLFLWGGAAGPLYTLALALAG 303
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 658549661 328 -RVKPEARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAIGAIVATLNLLVW 383
Cdd:cd17477  304 dRLPGDELVAANAALLLLYGLGSVIGPLLAGALMDAFGPHGLFLFLAAVALLFLLFL 360
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
7-181 5.49e-03

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 38.72  E-value: 5.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   7 GLSPALILLMSVATGLAVASNYYAQPL--------LDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFE-RRM 77
Cdd:cd17365  159 GGVPPLILLPLLRGTLLLWVTFFMGLLlvyllnswLPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGWLADRFGpKRV 238
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  78 LIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGL 156
Cdd:cd17365  239 LALFFALGAVSLALLGVSPASLVLLYVLVFLAGACVNGAQVGLYaLAARFYPTEVRATGVGWALGVGRLGAILGPLLGGL 318
                        170       180
                 ....*....|....*....|....*.
gi 658549661 157 LASLG-GWRTVYWVASVLMVIMALAL 181
Cdd:cd17365  319 LLAAGlGPESVFLALAIPAALGALAV 344
MFS_4 pfam06779
Uncharacterized MFS-type transporter YbfB; This family represents putative bacterial membrane ...
32-189 5.50e-03

Uncharacterized MFS-type transporter YbfB; This family represents putative bacterial membrane proteins which may be sugar transporters. Members carry twelve transmembrane regions which are characteriztic of members of the major facilitator sugar-transporter superfamily.


Pssm-ID: 399632 [Multi-domain]  Cd Length: 365  Bit Score: 38.51  E-value: 5.50e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661   32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAG-LLFLVPLGDMFER-RMLIVSMTLLAAGGMLITASSQSLTMMIVGTALT 109
Cdd:pfam06779  14 PILPVMIAEGQFSLSQAGLLAAANYAGYLAGaLLASFAWRHGASRlRPALLAGLLATVLLLLAMAATSSFWAVLLIRFLA 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  110 GLFSVVAQILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLG-GWRTVYWVASVLMVIMALALWRGLPK 187
Cdd:pfam06779  94 GVASAAVMIFGSsLILGHATAARRAFVGALLFAGVGIGIALSGLLVPLGLQLGlGGSSLWYGAGVLSAVLTLAVFPLLPR 173

                  ..
gi 658549661  188 VK 189
Cdd:pfam06779 174 RA 175
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
12-183 6.34e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 38.36  E-value: 6.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  12 LILLMSVATGLAVASNYYAQPLLdtIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGML 91
Cdd:cd17329  204 LFLLASFLISLIYFQLESTLPVY--VVEILGLGESLLGLLLALNALLIVLLQFPVARLVERFRLRKILMIGILLFAIGFA 281
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  92 ITASSQSLTMMIVGTALTGLFSVVAQILVP-LAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVA 170
Cdd:cd17329  282 VLAFANTLAVLILAMIVLTLGEMLVFPAVQtLVAALAPPDKRGSYMGFYALAWGLGRAIGPLVGGLLLDLLGPGLPWLIL 361
                        170
                 ....*....|...
gi 658549661 171 SVLMVIMALALWR 183
Cdd:cd17329  362 AALGLIAAALLLG 374
PRK05122 PRK05122
major facilitator superfamily transporter; Provisional
40-191 6.41e-03

major facilitator superfamily transporter; Provisional


Pssm-ID: 235348 [Multi-domain]  Cd Length: 399  Bit Score: 38.33  E-value: 6.41e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  40 AFNLSASSAGFIvtaaqlgyAAGLLFlvplGDMFER----RMLIVSMtLLAAGGMLITASSQSLTMMIVGTALTGL-FSV 114
Cdd:PRK05122 252 ALALTLFGVAFV--------GARLLF----GNLINRlgglRVAIVSL-LVEILGLLLLWLAPSPWMALIGAALTGFgFSL 318
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 115 VAQILVPLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVI---MALALWRGLPKVKQE 191
Cdd:PRK05122 319 VFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLglaLTWLLYRRAPRAVPE 398
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
43-169 6.54e-03

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 38.37  E-value: 6.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  43 LSASSAGFIVTAAQLGYAAGLlflvplgdMFERRMLIVSMTLLAAGGMLI-TASSQSLTMMIVGTALTGLFSVVAQ-ILV 120
Cdd:cd17318   62 LSSFFYGYILTQIPGGYLAEK--------YGAKRVLGYSILITALLTLLTpLAARGGYGALIVLRILQGLAQGVTFpAMH 133
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 658549661 121 PLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWV 169
Cdd:cd17318  134 ALWAKWAPPLERSRLTSIAYSGSQFGTVIAMPLSGFLCESLGWPSIFYI 182
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
46-183 6.79e-03

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 38.33  E-value: 6.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  46 SSAGFIVTAAQLGYAAGLLFLVPlgdmfERRMLIVSMtLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILV-PLAA 124
Cdd:cd17330  217 ALVGIAGILAQLLLIPRLAKRLG-----ERKLLRLGL-LLAIIGLLLLPFASSVPLLVLAAAILAFGTGIVFPALsALLS 290
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 658549661 125 TLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWR 183
Cdd:cd17330  291 KSVPSKEQGKAQGIIQSLQSLARIIGPLLAGPLYSFLGPGVPFLLAAGLLLIALFLLSL 349
MFS_SLCO_OATP cd17336
Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; ...
12-188 7.00e-03

Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; Solute carrier organic anion transporters (SLCOs) are also called organic anion transporting polypeptides (OATPs) or SLC21 (Solute carrier family 21) proteins. They are sodium-independent transporters that mediate the transport of a broad range of endo- as well as xenobiotics. Their substrates are mainly amphipathic organic anions with a molecular weight of more than 300Da, although there are a few known neutral or positively charged substrates. These include drugs including statins, angiotensin-converting enzyme inhibitors, angiotensin receptor blockers, antibiotics, antihistaminics, antihypertensives, and anticancer drugs. SLCOs/OATPs can be classified into 6 families (SLCO1-6 or OATP1-6) and each family may have subfamilies (e.g. OATP1A, OATP1B, OATP1C). Within the subfamilies, individual members are numbered according to the chronology of their identification and if there is already an ortholog known, they are given the same number. For example, the first SLCO identified, is rat OATP1A1 (encoded by the Slco1a1 gene). The second SLCO identified is the first human SLCO from the same subfamily and is called OATP1A2 (encoded by the SLCO1A2 gene). There are 11 human SLCOs/OATPs. SLCOs belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340894 [Multi-domain]  Cd Length: 411  Bit Score: 38.37  E-value: 7.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  12 LILLMSVATGLAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGML 91
Cdd:cd17336    4 FVVLLCLLGLLQGAVVSYFVSTITTIEKRFGLSSSQSGLILSANDIGQLLAVLLVSYFGGRGHRPRWIGIGSILMGLGCF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  92 ITASSQsltMMIVGTALTGLFSVvaqILVPLAATL----ASPEKRGKVVGTIMSGLLLGILLARTVAGLLAS-------- 159
Cdd:cd17336   84 LLALPH---FLFVGQFLLGIGSS---PLYTLGITYiddnVSKKNSPLYIGILYAMRVLGPALGFLLGSFLLRiyvdfsrv 157
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 658549661 160 -----------LGGWRTVYWVASVLMVIMALALWrGLPKV 188
Cdd:cd17336  158 plgitpddprwIGAWWLGFLILGILLLIVSIPLF-FFPPI 196
MFS_SLCO3_OATP3 cd17402
Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of ...
29-155 7.95e-03

Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters; The Solute carrier organic anion transporter 3 (SLCO3) or Organic anion transporting polypeptide 3 (OATP3) family contains only one subfamily, OATP3A, which contains only one mammalian member OATP3A1 (encoded by SLCO3A1). It mediates the Na(+)-independent transport of organic anions such as estrone-3-sulfate, prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123, and vasopressin. SLCO3A1 has been identified as a Crohn's disease (CD)-associated gene, which mediates inflammatory processes in intestinal epithelial cells through NF-kappaB transcription activation, resulting in a higher incidence of bowel perforation in CD patients. The SLCO3/OATP3 family belongs to the Solute carrier organic anion transporter [SLCO, also called organic anion transporting polypeptides (OATPs) or Solute carrier family 21] family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340960 [Multi-domain]  Cd Length: 444  Bit Score: 38.37  E-value: 7.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  29 YAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMiVGTAL 108
Cdd:cd17402   21 YLVSVLTTLERRFNLQSADVGVIASSFEIGNLALILFVSYFGARGHRPRLIGCGGIVMALGALLSALPEFLTHQ-YKTNM 99
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 658549661 109 TGLFSVVAQILVPLAATLASPEKRGKV---VGTIMSGLLLGILLARTVAG 155
Cdd:cd17402  100 MYLLLIGAQVLLGIGATPVQPLGVSYIddhVRRKDSSLYIGILFTMLVFG 149
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
32-238 8.54e-03

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 38.07  E-value: 8.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  32 PLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERR-MLIVSMTLLAAGGMLITASSqSLTMMIVGTALTG 110
Cdd:cd17333   17 ILGPSLEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRrTLILGLLLISLALALIFATP-SIYLFVVLMFLAG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661 111 LFSVVAQILVPLAATLASPEKRG----KVVGTIMSGLLLGILLArtvAGLLASLGGWRTVYWVASVLMVIMALALWRglP 186
Cdd:cd17333   96 LGAGILDTGANTFVGALFEESSAtrlnVLHGFFGLGALIGPLIA---TSLLTSELSWSWAYLIIGLIYLLLAILILL--T 170
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 658549661 187 KVKQENHLNYPQLLASVFSLFTQDKLLrtrallgcftfaNFSILWTSMAFLL 238
Cdd:cd17333  171 LFPELPSARNPQQSVGAFSASASRLLR------------NPSIILGALALFL 210
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
69-181 8.87e-03

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 37.98  E-value: 8.87e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  69 LGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIVGTALTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLLLGIL 148
Cdd:PRK09874  77 LADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGAL 156
                         90       100       110
                 ....*....|....*....|....*....|....
gi 658549661 149 LARTVAGLLASLGGWRTVYWV-ASVLMVIMALAL 181
Cdd:PRK09874 157 LGPLAGGLLADSYGLRPVFFItASVLFLCFLVTL 190
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
12-181 9.38e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 37.92  E-value: 9.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  12 LILLMSVATGLAVASNYYAQPLLdtiARAFNLSASSAGFIVTAAQLGyaaGLLFLVPLG---DMFERRMLIVSMTLLAAG 88
Cdd:cd17477  192 LALLGAFVAGFLEGAFYSLLPLY---GLRLGLSVAQAALLLAAFVLG---GLLLQWPLGwlaDRFDRRRVLLGCALLGAL 265
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658549661  89 GMLITASSQSLTMMIVgtALTGLFSVVAQILVPLAATLASPEKRGKVVGTIMSGLL----LGILLARTVAGLLASLGGWR 164
Cdd:cd17477  266 AALLLPLVPGLPLALL--VLLFLWGGAAGPLYTLALALAGDRLPGDELVAANAALLllygLGSVIGPLLAGALMDAFGPH 343
                        170
                 ....*....|....*..
gi 658549661 165 TVYWVASVLMVIMALAL 181
Cdd:cd17477  344 GLFLFLAAVALLFLLFL 360
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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