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Conserved domains on  [gi|644352360|ref|WP_025302107|]
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MULTISPECIES: pentapeptide MXKDX repeat protein [Serratia]

Protein Classification

pentapeptide MXKDX repeat protein( domain architecture ID 10021606)

pentapeptide MXKDX repeat protein similar to Azospira oryzae methionine-rich peptide X that serves as an oxidative stress sink, specifically for chlorite and hypochlorite

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
penta_MxKDx TIGR02953
pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, ...
 42-94 1.83e-11

pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.


:

Pssm-ID: 131998 [Multi-domain]  Cd Length: 75  Bit Score: 54.47  E-value: 1.83e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 644352360  42 DGMAKDGMKKECMGKDCMKKDKMGKDAMKKEGMAKDGMAKDGMKKDEMKKDAM 94
Cdd:TIGR02953 23 DAMKKDTMKKDAMGKDAMAKDAMSKDAMKKDAMKKDAMKKDGMKKDAMKKDAM 75
 
Name Accession Description Interval E-value
penta_MxKDx TIGR02953
pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, ...
 42-94 1.83e-11

pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.


Pssm-ID: 131998 [Multi-domain]  Cd Length: 75  Bit Score: 54.47  E-value: 1.83e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 644352360  42 DGMAKDGMKKECMGKDCMKKDKMGKDAMKKEGMAKDGMAKDGMKKDEMKKDAM 94
Cdd:TIGR02953 23 DAMKKDTMKKDAMGKDAMAKDAMSKDAMKKDAMKKDAMKKDGMKKDAMKKDAM 75
 
Name Accession Description Interval E-value
penta_MxKDx TIGR02953
pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, ...
 42-94 1.83e-11

pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.


Pssm-ID: 131998 [Multi-domain]  Cd Length: 75  Bit Score: 54.47  E-value: 1.83e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 644352360  42 DGMAKDGMKKECMGKDCMKKDKMGKDAMKKEGMAKDGMAKDGMKKDEMKKDAM 94
Cdd:TIGR02953 23 DAMKKDTMKKDAMGKDAMAKDAMSKDAMKKDAMKKDAMKKDGMKKDAMKKDAM 75
penta_MxKDx TIGR02953
pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, ...
 45-96 1.39e-09

pentapeptide MXKDX repeat protein; Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.


Pssm-ID: 131998 [Multi-domain]  Cd Length: 75  Bit Score: 49.84  E-value: 1.39e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 644352360  45 AKDGMKKECMGKDCMKKDKMGKDAMKKEGMAKDGMAKDGMKKDEMKKDAMGH 96
Cdd:TIGR02953 21 AQDAMKKDTMKKDAMGKDAMAKDAMSKDAMKKDAMKKDAMKKDGMKKDAMKK 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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