terminase small subunit [Escherichia coli]
terminase small subunit( domain architecture ID 10538622)
terminase small subunit binds to the packaging signal on DNA, allowing the terminase large subunit to cleave phage DNA and thread it through the portal protein channel into the procapsid, powered by ATP hydrolysis
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Phage_Nu1 | pfam07471 | Phage DNA packaging protein Nu1; Terminase, the DNA packaging enzyme of bacteriophage lambda, ... |
1-160 | 2.91e-78 | |||
Phage DNA packaging protein Nu1; Terminase, the DNA packaging enzyme of bacteriophage lambda, is a heteromultimer composed of subunits Nu1 and A. The smaller Nu1 terminase subunit has a low-affinity ATPase stimulated by non-specific DNA. : Pssm-ID: 369382 [Multi-domain] Cd Length: 164 Bit Score: 230.31 E-value: 2.91e-78
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Name | Accession | Description | Interval | E-value | ||||
Phage_Nu1 | pfam07471 | Phage DNA packaging protein Nu1; Terminase, the DNA packaging enzyme of bacteriophage lambda, ... |
1-160 | 2.91e-78 | ||||
Phage DNA packaging protein Nu1; Terminase, the DNA packaging enzyme of bacteriophage lambda, is a heteromultimer composed of subunits Nu1 and A. The smaller Nu1 terminase subunit has a low-affinity ATPase stimulated by non-specific DNA. Pssm-ID: 369382 [Multi-domain] Cd Length: 164 Bit Score: 230.31 E-value: 2.91e-78
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Nu1 | COG4220 | Phage DNA packaging protein, Nu1 subunit of terminase [Mobilome: prophages, transposons]; |
1-181 | 9.45e-43 | ||||
Phage DNA packaging protein, Nu1 subunit of terminase [Mobilome: prophages, transposons]; Pssm-ID: 443364 Cd Length: 170 Bit Score: 140.58 E-value: 9.45e-43
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Name | Accession | Description | Interval | E-value | ||||
Phage_Nu1 | pfam07471 | Phage DNA packaging protein Nu1; Terminase, the DNA packaging enzyme of bacteriophage lambda, ... |
1-160 | 2.91e-78 | ||||
Phage DNA packaging protein Nu1; Terminase, the DNA packaging enzyme of bacteriophage lambda, is a heteromultimer composed of subunits Nu1 and A. The smaller Nu1 terminase subunit has a low-affinity ATPase stimulated by non-specific DNA. Pssm-ID: 369382 [Multi-domain] Cd Length: 164 Bit Score: 230.31 E-value: 2.91e-78
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Nu1 | COG4220 | Phage DNA packaging protein, Nu1 subunit of terminase [Mobilome: prophages, transposons]; |
1-181 | 9.45e-43 | ||||
Phage DNA packaging protein, Nu1 subunit of terminase [Mobilome: prophages, transposons]; Pssm-ID: 443364 Cd Length: 170 Bit Score: 140.58 E-value: 9.45e-43
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Blast search parameters | ||||
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