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Conserved domains on  [gi|556424867|ref|WP_023309794|]
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MULTISPECIES: phosphate ABC transporter permease PstA [Enterobacter]

Protein Classification

phosphate ABC transporter permease PstA( domain architecture ID 11485290)

phosphate ABC transporter permease PstA is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter for phosphate; ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment; the captured solute is delivered to a gated translocation pathway formed by the two TMs

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
pstA PRK11268
phosphate ABC transporter permease PstA;
1-295 0e+00

phosphate ABC transporter permease PstA;


:

Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 582.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867   1 MATLEMQATAELAESRRKMQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEMTPPPNTAGGGLA 80
Cdd:PRK11268   1 MATVEMQNTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGMSLALFTEMTPPPNTAGGGLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  81 NALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGWAGVIAL 160
Cdd:PRK11268  81 NAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 161 ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWST 240
Cdd:PRK11268 161 ALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTALSNQFWST 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 556424867 241 DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKH 295
Cdd:PRK11268 241 DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLLITLCVLLLNILARVVFAKKKH 295
 
Name Accession Description Interval E-value
pstA PRK11268
phosphate ABC transporter permease PstA;
1-295 0e+00

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 582.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867   1 MATLEMQATAELAESRRKMQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEMTPPPNTAGGGLA 80
Cdd:PRK11268   1 MATVEMQNTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGMSLALFTEMTPPPNTAGGGLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  81 NALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGWAGVIAL 160
Cdd:PRK11268  81 NAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 161 ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWST 240
Cdd:PRK11268 161 ALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTALSNQFWST 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 556424867 241 DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKH 295
Cdd:PRK11268 241 DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLLITLCVLLLNILARVVFAKKKH 295
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 40-292 3.67e-116

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 334.70  E-value: 3.67e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  40 FGLFWLVWILFSTVVRGIDGMSLSLFTEMtPPPNTAGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAE 119
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPALSWEFLTSS-PSPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLAR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 120 VIRFINDILLSAPSIVVGLFVYTVVVAQM-EHFSGWAGVIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMI 198
Cdd:COG0581   80 LIRFAIDVLAGVPSIVYGLFGYALFVLTLgLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTI 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 199 SAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLC 278
Cdd:COG0581  160 RKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPFATLPVHIYNLASSPYPAAQELAWAAALVLLLL 239

                        250
                 ....*....|....
gi 556424867 279 VLLLNILARVIFAK 292
Cdd:COG0581  240 VLLLNLLARLLRRR 253
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 27-294 1.02e-86

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 260.25  E-value: 1.02e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867   27 NRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEmTPPPNTAGGGLANALAGSGLLILWATVFGTPLGIMAGI 106
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTK-SPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  107 YLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQME--HFSGWAGVIALALLQVPIVIRTTENMLKLVPDSLR 184
Cdd:TIGR00974  80 YLAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLggGFSLLAGALALALLILPVIIRTTEEALKAVPKDLR 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  185 EAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWSTDMMQPIANLPVTIFKFA-MSPFAE 263
Cdd:TIGR00974 160 EASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFDPFATLPVLIYNLAsEGPYVE 239

                         250       260       270
                  ....*....|....*....|....*....|.
gi 556424867  264 WQQLAWAGVLIITLCVLLLNILARVIFAKKK 294
Cdd:TIGR00974 240 AQQLAWAAALVLIVLVLLLNLIARLLRRRFK 270
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 83-238 2.30e-17

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 78.09  E-value: 2.30e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  83 LAGSGLLILWATVFGTPLGIMAGIYLAEYGRksWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQM----EHFSGWAGVI 158
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRG--KLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLgwgiLPGLGLPALI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 159 ALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFW 238
Cdd:cd06261   79 LALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 101-295 2.63e-16

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 75.03  E-value: 2.63e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  101 GIMAGIYLAEYgRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVP 180
Cdd:pfam00528   1 GIPLGIIAALR-RGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  181 DSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTsLSNQFWSTDMMQPIANlpvtifkfamSP 260
Cdd:pfam00528  80 SDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAILG----------YD 148

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 556424867  261 FAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKH 295
Cdd:pfam00528 149 YPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 83-224 3.09e-07

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 49.47  E-value: 3.09e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  83 LAGSGLLILWATVFGTPLGimAGIYLAEYGRKSWlaeVIRFINdILLSAPSIVVGLFVYTVV-----VAQMEH-FSGWAG 156
Cdd:NF038017   2 LRVSGTATLIAALIGIPLG--ALLALRRFPGRRL---VISLLN-TLMGLPPVVVGLIVYLLLsrsgpLGFLGLlYTPTAM 75

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 556424867 157 VIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAItLKASVSGIMTGILLAVARIAGE 224
Cdd:NF038017  76 IIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISE 142
 
Name Accession Description Interval E-value
pstA PRK11268
phosphate ABC transporter permease PstA;
1-295 0e+00

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 582.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867   1 MATLEMQATAELAESRRKMQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEMTPPPNTAGGGLA 80
Cdd:PRK11268   1 MATVEMQNTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGMSLALFTEMTPPPNTAGGGLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  81 NALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGWAGVIAL 160
Cdd:PRK11268  81 NAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 161 ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWST 240
Cdd:PRK11268 161 ALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTALSNQFWST 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 556424867 241 DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKH 295
Cdd:PRK11268 241 DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLLITLCVLLLNILARVVFAKKKH 295
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 40-292 3.67e-116

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 334.70  E-value: 3.67e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  40 FGLFWLVWILFSTVVRGIDGMSLSLFTEMtPPPNTAGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAE 119
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPALSWEFLTSS-PSPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLAR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 120 VIRFINDILLSAPSIVVGLFVYTVVVAQM-EHFSGWAGVIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMI 198
Cdd:COG0581   80 LIRFAIDVLAGVPSIVYGLFGYALFVLTLgLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTI 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 199 SAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLC 278
Cdd:COG0581  160 RKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPFATLPVHIYNLASSPYPAAQELAWAAALVLLLL 239

                        250
                 ....*....|....
gi 556424867 279 VLLLNILARVIFAK 292
Cdd:COG0581  240 VLLLNLLARLLRRR 253
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 27-294 1.02e-86

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 260.25  E-value: 1.02e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867   27 NRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEmTPPPNTAGGGLANALAGSGLLILWATVFGTPLGIMAGI 106
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTK-SPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  107 YLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQME--HFSGWAGVIALALLQVPIVIRTTENMLKLVPDSLR 184
Cdd:TIGR00974  80 YLAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLggGFSLLAGALALALLILPVIIRTTEEALKAVPKDLR 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  185 EAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFWSTDMMQPIANLPVTIFKFA-MSPFAE 263
Cdd:TIGR00974 160 EASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFDPFATLPVLIYNLAsEGPYVE 239

                         250       260       270
                  ....*....|....*....|....*....|.
gi 556424867  264 WQQLAWAGVLIITLCVLLLNILARVIFAKKK 294
Cdd:TIGR00974 240 AQQLAWAAALVLIVLVLLLNLIARLLRRRFK 270
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 13-294 2.74e-37

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 134.06  E-value: 2.74e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  13 AESRRKMQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMS----LSLFTEMTPPPNTAGG--GLANALAGS 86
Cdd:COG0573    3 SSRLRPRRRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQevglLEFLTGTEWNPVSSNGefGILPLIVGT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  87 GLLILWATVFGTPLGIMAGIYLAEYGRKsWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGW--------AGVI 158
Cdd:COG0573   83 LLVSLIALLIAVPLGLGIAIFLSEYAPP-RLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFPWppsgfsllTAGI 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 159 ALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGET-APLLFTSLSNQF 237
Cdd:COG0573  162 VLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETmAVLMVAGNAPQI 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 556424867 238 wSTDMMQPIANLPVTI-FKFAMSPFAEWQQLA-WAGVLIITLCVLLLNILARVIFAKKK 294
Cdd:COG0573  242 -PFSLFDPGRTLTALIaLEFGEAPFGSLHYSAlFALGLVLFVITLLVNLLARLIVRRYR 299
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 42-294 5.50e-26

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 103.89  E-value: 5.50e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867   42 LFWLVWILFSTVVRGIDGMSLSLF---TEMTPPPNTAGG--GLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKsW 116
Cdd:TIGR02138  19 LLLIVLFLLYEAIPAFEKNGILNFltgTVWDPGSGPVQEqyGALPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAPK-R 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  117 LAEVIRFINDILLSAPSIVVGLFVYTVVVAQME-HFSGW----------------AGVIALALLQVPIVIRTTENMLKLV 179
Cdd:TIGR02138  98 VRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKpHFQPFlgsnlgliplfggpilTAGIVLAIMILPTIASISRDALRAV 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  180 PDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGET-APLLFTSLSNQFWSTDMMQPIANLPVTI-FKFA 257
Cdd:TIGR02138 178 PRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETmAVTMVIGNVFPISPLSLFDPGTTITSLIaNQFG 257

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 556424867  258 MSPFAEWQQLA-WAGVLIITLCVLLLNILARVIFAKKK 294
Cdd:TIGR02138 258 EASGGSVHTSAlFALGLVLFVITLLVNILARYIVRRRR 295
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 83-238 2.30e-17

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 78.09  E-value: 2.30e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  83 LAGSGLLILWATVFGTPLGIMAGIYLAEYGRksWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQM----EHFSGWAGVI 158
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRG--KLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLgwgiLPGLGLPALI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 159 ALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQFW 238
Cdd:cd06261   79 LALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 101-295 2.63e-16

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 75.03  E-value: 2.63e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  101 GIMAGIYLAEYgRKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVP 180
Cdd:pfam00528   1 GIPLGIIAALR-RGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  181 DSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTsLSNQFWSTDMMQPIANlpvtifkfamSP 260
Cdd:pfam00528  80 SDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAILG----------YD 148

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 556424867  261 FAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKH 295
Cdd:pfam00528 149 YPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
15-289 3.70e-12

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 66.34  E-value: 3.70e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  15 SRRKMQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEMTPPPNTAGGGLANALAGSGLLILWAT 94
Cdd:COG1178  272 GGRARRPRRVKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTKALDDNLTLDNYRFVLLDPSLLRALLNSLLLALLAA 351

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  95 VFGTPLGIMAGIYLAEygRKSWLAEVIRFINDILLSAPSIVVG---LFVYTVVVAQMEHFSGWAGVIALALLQVPIVIRT 171
Cdd:COG1178  352 LLAVLLALLLAYLVRR--RRGRLARLLDRLAMLPYAVPGIVLGlglLLLFNRPLPLLLYGTLAILVLAYVVRFLPFALRS 429

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 172 TENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGE-TAPLLFTSLSnqfWSTdmmqpianLP 250
Cdd:COG1178  430 LEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKElSATLLLRPPG---FET--------LA 498

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 556424867 251 VTIFKFAMSPFaeWQQLAWAGVLIITLCVLLLNILARVI 289
Cdd:COG1178  499 VLIYQLASSGR--YGEAAALALLLVLVSLLPVLLLERLL 535
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 78-294 2.87e-08

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 53.58  E-value: 2.87e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  78 GLANALAGSGLLILWATVFGTPLGIMAGIYLAEYgrKSWLAEVIRFINDILLSAPSIVVGLFVYTVVVAQMEHFSGWAGV 157
Cdd:COG1177   58 RLLDALLNSLLIALLSTLLATVLGTPAALALARY--RFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLI 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 158 IALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGETAPLLFTSLSNQf 237
Cdd:COG1177  136 LAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGV- 214

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 238 wstdmmqpiANLPVTIF---KFAMSPFAewqqlAWAGVLIITLCVLLLNILARVIFAKKK 294
Cdd:COG1177  215 ---------TTLPVYIYsmiRRGISPEI-----NALSTLLILLSLLLLLLAERLRRRGER 260
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 83-224 3.09e-07

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 49.47  E-value: 3.09e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  83 LAGSGLLILWATVFGTPLGimAGIYLAEYGRKSWlaeVIRFINdILLSAPSIVVGLFVYTVV-----VAQMEH-FSGWAG 156
Cdd:NF038017   2 LRVSGTATLIAALIGIPLG--ALLALRRFPGRRL---VISLLN-TLMGLPPVVVGLIVYLLLsrsgpLGFLGLlYTPTAM 75

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 556424867 157 VIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAItLKASVSGIMTGILLAVARIAGE 224
Cdd:NF038017  76 IIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISE 142
cysT CHL00187
sulfate transport protein; Provisional
 26-224 1.11e-06

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 48.47  E-value: 1.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  26 KNRIALSLSMA---TMAFGLFWLVWILFSTVVRGIDGMSLSLFTEMTPPPNTAGGGLANALAgsglliLWATVFGTPLGI 102
Cdd:CHL00187   3 DFNFSLKFSSIyiiSLSYIIFLLVLPILALLIKASQQPWSDFLQKATEPIALSAYSLTLSMA------LIAALINGFFGL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 103 MAGIYLAEY---GRKSWLAEVirfinDILLSAPSIVVGLFVYTVVVAQ--MEHFSGWAGV--------IALALLQV--PI 167
Cdd:CHL00187  77 LIAWVLVRYnfpGKRLLDAAV-----DLPFALPTSVAGLTLATVYGDNgwIGHLLSHLGIqivftklgVLLAMIFVsfPF 151

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 556424867 168 VIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGE 224
Cdd:CHL00187 152 VVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
OpuBB COG1174
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ...
 60-218 3.79e-06

ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440787 [Multi-domain]  Cd Length: 212  Bit Score: 46.59  E-value: 3.79e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  60 MSLSLFTEMTpppnTAGGGLANALAGSGLLILWATVFGTPLGIMAGIYLaeyGRKSWLAEVIRFINDILLSAPSIvvGLF 139
Cdd:COG1174    1 MNLSLIEWLA----DNRDGILALLLEHLLLVLLALLIALLIAVPLGILI---TRRRRLAGLVLGVANILQTIPSL--ALL 71

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556424867 140 VYTVVVAQmehFSGWAGVIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAV 218
Cdd:COG1174   72 ALLIPLLG---IGPAPAIIALVLYALLPILRNTYTGLRSVDPAVVEAARGMGMTPWQRLWRVELPLALPVILAGIRTAA 147
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 91-234 1.68e-05

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 45.51  E-value: 1.68e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  91 LWATVFGTPLGIMAGIYLAEY---GRKswlaeVIRFINDILLSAPSIVVG-----LFVYTVVVAQMEH-------FSGWA 155
Cdd:COG0555   64 LIAALINLVFGLPLAWVLVRYrfpGKR-----LVDALVDLPFALPTAVAGialllLFGPNGWLGQLLAplgikvaFTPLG 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 156 GVIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVAR----------IAG-- 223
Cdd:COG0555  139 IVLAQTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARalgefgavifIAGnl 218

                        170
                 ....*....|....*.
gi 556424867 224 ----ETAPLL-FTSLS 234
Cdd:COG0555  219 pmktEILPLLiYLKLE 234
modB PRK09421
molybdate ABC transporter permease subunit;
91-224 2.64e-04

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 41.45  E-value: 2.64e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  91 LWATVFGTPLGIMAGIYLA--EYGRKSWLAEVIRfindILLSAPSIVVGLFVYTVVVAQ-------MEHFS-----GWAG 156
Cdd:PRK09421  19 SVAVLFSLPFGILVAWLLArcRFPGKSLLDSLLH----LPLVLPPVVTGYLLLISMGRRgfigqwlYEWFGisfafSWRG 94

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556424867 157 -VIALALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVARIAGE 224
Cdd:PRK09421  95 aALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
DppB COG0601
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 79-219 3.67e-04

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440366 [Multi-domain]  Cd Length: 314  Bit Score: 41.59  E-value: 3.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  79 LANALAGSGLLILWATVFGTPLGIMAGIYLAeYGRKSWLAEVIRFINDILLSAPSIVVG-LFVYTVVV-----------A 146
Cdd:COG0601   91 IAERLPVTLELALLALLLALLIGIPLGILAA-LRRGSWLDRLITVLALLGISIPSFWLGlLLILLFAVklgwlpvsgrvS 169

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 147 QMEHFSGWAG-----VIALALLQVPIVIRTT-ENMLklvpDSLRE----AAYALGTPKWKMISAITLKASVSGIMTGILL 216
Cdd:COG0601  170 PWEDFLDALRhlilpALTLALGSLAGIARLTrSSML----EVLGQdyvrTARAKGLSERRVLLRHALRNALIPVVTVLGL 245


                 ...
gi 556424867 217 AVA 219
Cdd:COG0601  246 QLG 248
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
19-217 3.70e-04

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 41.69  E-value: 3.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  19 MQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRGIDGMSLSLFTEmtpppntagGGLANALAGSGLLILWATVFGT 98
Cdd:COG1178    1 MSTRPRRRPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFWALLSD---------PYLWRALGNTLLLALLVTLLSL 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  99 PLGIMAGIYLAEY---GRKswlaeVIRFINDILLSAPSIVVG-----LFVYTVVVAQMEH----------FSGWAGVIAL 160
Cdd:COG1178   72 LLGVPLAWLLARTdfpGRR-----LLRWLLLLPLALPPYVVAlawiaLFGPNGLLNTLLRalfgleppdiYGLGGIILVL 146

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 556424867 161 ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLA 217
Cdd:COG1178  147 VLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLV 203
pstC PRK11275
phosphate ABC transporter permease PstC;
12-230 1.51e-03

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 39.68  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  12 LAESRRKMQARRRMKNRIALSLSMATMAFGLFWLVWILFSTVVRG---IDGMSLS-LFTEMTPPPNTAGGGLAnALAGSG 87
Cdd:PRK11275   1 MAATKPAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSwpsIQKFGLSfLWTKEWDAPNDIYGALV-PIYGTL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  88 LLILWATVFGTPLGIMAGIYLAEYGrKSWLAEVIRFINDILLSAPSIVVG---LFVYTVVVAQM---------------- 148
Cdd:PRK11275  80 VTSFIALLIAVPVSFGIALFLTELA-PGWLKRPLGIAIELLAAIPSIVYGmwgLFVFAPLFATYfqepvgnvlsnipivg 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867 149 EHFSG--------WAGVIaLALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAVAR 220
Cdd:PRK11275 159 ALFSGpafgigilAAGVI-LAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGR 237

                        250
                 ....*....|
gi 556424867 221 IAGETAPLLF 230
Cdd:PRK11275 238 ALGETMAVTF 247
PRK10952 PRK10952
proline/glycine betaine ABC transporter permease ProW;
89-214 3.27e-03

proline/glycine betaine ABC transporter permease ProW;


Pssm-ID: 236805  Cd Length: 355  Bit Score: 38.53  E-value: 3.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556424867  89 LILWATVFGTPLGIMAGIYLAEYGRKswlAEVIRFINDILLSAPSivvglFVYTVVVAQMEHFSGWAGVIALALLQVPIV 168
Cdd:PRK10952 152 LVLTALLFCIVIGLPLGIWLARSPRA---AKIIRPLLDAMQTTPA-----FVYLVPIVMLFGIGNVPGVVVTIIFALPPI 223

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 556424867 169 IRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGI 214
Cdd:PRK10952 224 VRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGV 269
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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