|
Name |
Accession |
Description |
Interval |
E-value |
| FimD |
COG3188 |
Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; |
10-854 |
0e+00 |
|
Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures];
Pssm-ID: 442421 [Multi-domain] Cd Length: 817 Bit Score: 904.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 10 LSLGLGLSVVFSSFSARAQEHFNPHLLETDSAEvpAMDLSLFAKDE-VPPGDYNVDIFINGNLVDSKTLSFRRLKSaptS 88
Cdd:COG3188 7 LALLLLLLLALAAAAAAAAVEFNPAFLDGDDAA--AIDLSRFSRGNyVPPGTYYLDVYVNGQPLGRGDITFVADRD---D 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 89 DRTGACLNVTQLKAWNVRVDNYFGEQEKASECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITA 168
Cdd:COG3188 82 GRLQPCLTPELLEQLGLKLDALPALLAADGQCVDLSAIPGASVRFDFATQRLDLSVPQAALPYQARGYVPPSLWDDGIPA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 169 GLLNYSVSGQQDlHQRNGTDSSNQFLSLQPGLNVGAWRFRNYSTYTHS-ESENDWDSVYTYASRDIKSLKSQLVLGQGTT 247
Cdd:COG3188 162 LLLNYDLNASRS-RGRSGSASESRYLGLNSGLNLGAWRLRNNSSYSYSsGGGSGWQRLDTYLQRDIPALRSQLTLGDSYT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 248 RGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQVVI 327
Cdd:COG3188 241 SSDWFDSVRFRGVQLASDFRMLPDSLRGYAPVVRGIAASNATVTVRQNGYVIYQTTVPPGPFEINDLPPTGGAGDLDVTV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 328 KESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQDGSGSRAEdfNFIQGSAAWGVGKGITLYGGyIQAEDNYSNLIA 407
Cdd:COG3188 321 TEADGREQTFTVPFASVPQLLRPGLSRYSLAAGRYRRNGSFDYGP--PFAQGTLRYGLSNGLTLYGG-AEAAEDYQAGGL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 408 GTGFNMGSAGALSFDISQSWADIPqpdnmrQQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFLNDWDPG 487
Cdd:COG3188 398 GAGFNLGALGALSADVTQSRARLP------DDDTGSGQSYRLGYSKSFDETGTNFSLAGYRYSTRGYRDLSDALDARDSG 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 488 NSTiDNGRERNRFDVTISQTLP-FGTLSLSMYDASYWN-SEHADSMNLGFSSTLGPVSYSLNYAHSKNVNGGynndsdny 565
Cdd:COG3188 472 GDN-SSYRPRSRFQATLSQSLGdGGSLYLSYSQQDYWDgSGRTRSYSLGYSNSLRNISYSLSASRSRNGGGR-------- 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 566 dDDNVFSLNLSVPFSafshseaaRSVSANYSMNSSKNGDTTHNIGISGTAMQENQLNWQVSEGYNADSEATNGNVTVGYQ 645
Cdd:COG3188 543 -RDRSVSLSLSIPLG--------NRSSASYSLSRDNGGGTSQQVGLSGSAPEDGGLGYSLSAGYGSGGDGNSGSANLSYR 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 646 STYADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYH 725
Cdd:COG3188 614 GSYGTLSAGYSYSRGYRQVSAGASGGLVAHAGGVTLSRRLGDTFALVDAPGAAGVPVNNERGGRTDRRGYALVPYLTPYR 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 726 SNSISLNTVDASDTsAAIDNIAKTVVPTKGAVVRVKYNTWIGQKAMMTLT-YNGKPVPFGAVVTQTSGESddtrSSIVGD 804
Cdd:COG3188 694 RNRVSIDPLDLPDD-VELDNTEQRVVPTRGAGVLVRFPTRRGRRALLTLRdADGKPLPFGAEVTDEGGQE----VGIVGQ 768
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|
gi 556412326 805 GGEVYLVGLAGKGRLIVKWGEtANKQCAVDYTLAGAKTEADILFINGVCH 854
Cdd:COG3188 769 DGQVYLSGLPPQGTLTVKWGD-GAQQCRASYTLPASADGQGIPRLPLTCR 817
|
|
| PRK15294 |
PRK15294 |
fimbrial outer membrane usher protein; |
14-854 |
0e+00 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185194 [Multi-domain] Cd Length: 845 Bit Score: 742.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 14 LGLSVVFSSFS---ARAQEHFNPHLLETDSAEVPAMDLSLFAKDEVPPGDYNVDIFINGNLVDSKTLSFRRLKSAPTSDR 90
Cdd:PRK15294 12 LALSFLFICCSikpALAHDHFNPLSLENDEPGVENVDLSVFEKGGQAEGTYNVDIYINNTSVETKNIAFKNKKSADNKLS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 91 TGACLNVTQLKAWNVRVDNYFGEQEKASECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITAGL 170
Cdd:PRK15294 92 LQPCLSVEQLKQWGVKTENFPELKNDPNGCTDLSLLAGAVAKFNVIGNRLDLAIPQIALIADPREFVPTSEWDEGINAFL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 171 LNYSVSGQQDLHQRNGTDSSNQFLSLQPGLNVGAWRFRNYSTYTH-SESENDWDSVYTYASRDIKSLKSQLVLGQGTTRG 249
Cdd:PRK15294 172 LNYSFTGSQDHDIDENRTENSEYANLRPGINIGAWRFRNYSTWNHdSDGQNSWDSAYTYVSRDIEFLKGQLIAGENNTPA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 250 GIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQVVIKE 329
Cdd:PRK15294 252 DVFDSISFKGVQISSDDDMLPDSMKGFAPVIRGVAKSSAQVTVEQNGYTIYKTNVPAGPFAINDLYPTGGSGDLYVTIKE 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 330 SDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQDGSGSRAEdfNFIQGSAAWGVGKGITLYGGY--IQAEDNYSNLIA 407
Cdd:PRK15294 332 SDGSEQHFIVPYASVPVLQREGHLKYDLTVGRTRSSDTHSAQQ--NFAELTALYGLAGGITAYGGIesTLSNDVYHAALI 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 408 GTGFNMGSAGALSFDISQSWADIPQPDNMrqQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFLNDWDpG 487
Cdd:PRK15294 410 GTGLNLGDLGALSLDVTNSWSKIKAGDVV--SDTLTGQSWRIRYSKDIQSTGTNFTVAGYRYSTKDYYALEDVLDTYS-D 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 488 NSTIDNgrERNRFDVTISQTLPFGTLSLSMYDASYWNSEHADSMNLGFSSTLGPVSYSLNYAHSKNV-NGGYNNDSDNYD 566
Cdd:PRK15294 487 NSHYDH--VRNRTDLSLSQDIIYGSISLTLYNEDYWNDTHTTSLGIGYNNTWHNVSYGINYSYTLNAdNSQDEDDDTEDS 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 567 DDNVFSLNLSVPFSAFshseaARSVSANYSMNSSKNGDTTHNIGISGTAMQENQLNWQVSEGYNADSEATNGNVTVGYQS 646
Cdd:PRK15294 565 NDQQISINISIPLDAF-----MPSTYATYNMNSAKDGDTTHTVGLNGTALAQKNLSWSVQEGYSSQEKATSGNVSATYNG 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 647 TYADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYHS 726
Cdd:PRK15294 640 TYADINGGYSYDNHMRRLNYGVQGGVLLHRNGLTLSQPMDDTIILVKAPGAAGVPVNNETGVDTDFRGYAVVPYASPYHR 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 727 NSISLNTVDASDTSAAIDNiAKTVVPTKGAVVRVKYNTWIGQKAMMTLT-YNGKPVPFGAVVTQTSgeSDDTRSSIVGDG 805
Cdd:PRK15294 720 NEVSLDTTGIRKNIELIDT-SKTLVPTRGAVVRAEYKTNIGYKALMVLTrINNLPVPFGATVSSLT--KPDNHSSFVGDA 796
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 556412326 806 GEVYLVGLAGKGRLIVKWGETANKQCAVDYTLAGAKTEADILFINGVCH 854
Cdd:PRK15294 797 GQAWLTGLEKQGRLLVKWGPTAADRCQVSYRIPSSPSASGVEILHEQCQ 845
|
|
| PRK15193 |
PRK15193 |
outer membrane usher protein; Provisional |
4-854 |
0e+00 |
|
outer membrane usher protein; Provisional
Pssm-ID: 237919 [Multi-domain] Cd Length: 876 Bit Score: 627.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 4 VKQTYVLSLGLGLSVVFSSFSARAQEHFNPHLLETDSAEVPamDLSLFAKD-EVPPGDYNVDIFINGNLVDSKTLSFRRL 82
Cdd:PRK15193 12 LSSGGVPSLALGIVVFVSAGNAQAETYFNPAFLSDDPSMVA--DLSRFEKGaKIAAGVYRVDIVLNNTFVATRDVNFVEI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 83 K----SAPTSDR-TGACLNVTQLKAWNVRVDNY-FGEQEKASECVDLFT-IPGADEKIDLAQQRFDLILPQVALFNTARG 155
Cdd:PRK15193 90 KttgkSAPTDDKgLAACLTTESLDAMGVNTDAFpAFKQLAKGACPPLASiIPDASVTFDFNKQRLDISVPQIAIKSSARG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 156 YVSPERWDEGITAGLLNYSVSGQQDLHQRNGTDSSNQ-FLSLQPGLNVGAWRFRNYSTYTHSESEN----DWDSVYTYAS 230
Cdd:PRK15193 170 YIPPERWDEGINALLLNYSFSGANSIHSSADSDSGDSyFLGLNSGVNLGPWRLRNYSTWNRSSGQTaedsDWQHISSYLE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 231 RDIKSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFE 310
Cdd:PRK15193 250 RAVIPLKGELTAGDSYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPTVRGIAKSNAQVTIKQNGYTIYQTYVSPGAFE 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 311 FSDMYPTGSSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHqdGSGSRAEDFNFIQGSAAWGVGKGIT 390
Cdd:PRK15193 330 ISDLYPTSSSGDLLVEVKEADGSINSYSVPYSAVPLLQREGRIKYAVTLAKYR--TNSNEQQEVKFAQATLQWGLPHGFT 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 391 LYGGyIQAEDNYSNLIAGTGFNMGSAGALSFDISQSwadipqPDNMRQQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFS 470
Cdd:PRK15193 408 WYGG-TQLSEYYHALAFGLGFNLGDWGAISFDATQA------KSTLADQSEHKGQSYRFLYAKSLNQLGTNFQLMGYRYS 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 471 TRGYLSFQDFL------NDWDPGNSTIDNGRE-----------RNRFDVTISQTL-PFGTLSLSMYDASYWNSEHADSM- 531
Cdd:PRK15193 481 TSGFYTLSDTMykhmdgYEFDDGDDEDKSTPMwsdyynlfytkRGKLQVNISQQLgEYGSFYLSGSQQTYWHTDQKDRLl 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 532 NLGFSSTLGPVSYSLNYAHSKNVNggynndsdNYDDDNVFSLNLSVPFSAF----SHSEAARSVSANYSMNSSKNGDTTH 607
Cdd:PRK15193 561 QFGYNTQIKDISLGVSYNYSKSRG--------QPDADQVFALNFSLPLNLWlprsNDTRKKHNAYATSSTSIDNEGHVTQ 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 608 NIGISGTAMQENQLNWQVSEGYNADSEATNGNVTVGYQSTYADMSAGYSYDDY--SRRVNYSLRGGMVLHRDGITLARQL 685
Cdd:PRK15193 633 NAGLTGTLLDDNNLSYSVQQGYNNEGKGASGSASLDYKGAFGDANVGYNYSDNgsQQQLNYGLSGGLVAHSQGITLSQPL 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 686 NDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYHSNSISLNTVDASDtSAAIDNIAKTVVPTKGAVVRVKYNTW 765
Cdd:PRK15193 713 GETNVLIAAPGAENVRVANSTGLKTDWRGYAVVPYATSYRENRIALDAASLKD-NVDLENAVVNVVPTKGALVLAEFNAH 791
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 766 IGQKAMMTLTYNGKPVPFGAVVTQtsgeSDDTRSSIVGDGGEVYLVGLAGKGRLIVKWGETANKQCAVDYTLAGAKTEAD 845
Cdd:PRK15193 792 VGARALMTLSHQGIPLPFGATVTL----DDQHNSGIVDDDGSVYLSGLPAQGVLHVRWGEAPDQICVASYHLTEQQINSA 867
|
....*....
gi 556412326 846 ILFINGVCH 854
Cdd:PRK15193 868 LTRMDAICR 876
|
|
| PRK15207 |
PRK15207 |
outer membrane usher protein LpfC; |
19-853 |
0e+00 |
|
outer membrane usher protein LpfC;
Pssm-ID: 185129 [Multi-domain] Cd Length: 842 Bit Score: 590.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 19 VFSSFSARAQEhFNPHLLETDSAEVPAMDLSLFAKD--EVPPGDYNVDIFINGNLVDSKTLSFrrlKSAPTSDRTGA--- 93
Cdd:PRK15207 24 IASTLPAYAGK-FNPKFLEDVQGIDQHVDLSMYESPvgQQLPGKYRVSVFVNEEKMESRTLEF---KAATEAQRKAMges 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 94 ---CLNVTQLKAWNVRVDNYFGEQEKASECVDLF--TIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITA 168
Cdd:PRK15207 100 lvpCLSRVQLEEMGVRVDSFPALKMAPPEACVAFdeIIPQATSHFDFNTQTLHLSFPQAAMMQTARGTVPESRWDEGIPA 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 169 GLLNYSVSGQQDLHQRNGTDSS----NQFLSLQPGLNVGAWRFRNYSTYTHSESENDWDSVYTYASRDIKSLKSQLVLGQ 244
Cdd:PRK15207 180 LLLDYSFSGSNGSYDGTGSSSSytsdSYYLNLRSGLNLGAWRLRNYSTWNRTDGKNQWDNIGTSLSRAIIPLKSQLTLGD 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 245 GTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQ 324
Cdd:PRK15207 260 TATAGDIFDSVQMRGALLASDEEMLPDSQRGFAPVVRGIAKSNAEVSIEQNGYVIYRTFVQPGAFEINDLYPTSNSGDLT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 325 VVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKtHQDGSGSRAEDfNFIQGSAAWGVGKGITLYGGYIQAeDNYSN 404
Cdd:PRK15207 340 VIIKEADGSEQRFIQPFSSVAIFQREGHLKYSLAAGE-YRAGNYDSAKP-KFGQLDAMYGLPWGMTAYGGALLS-ADYNA 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 405 LIAGTGFNMGSAGALSFDISQSwadipqPDNMRQQEHHSGQSYRVRYSKTLqQTNTDIAVAGYKFSTRGYLSFQDFLNDW 484
Cdd:PRK15207 417 LALGLGKNFGYIGAISIDVTQA------KSQLRNNEKSEGQSYRFLYSKSF-ESGTDFRLLGYKYSTSGYYTFQEATDVR 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 485 DPGNSTIDNGRERNRFDVTISQTL-PFGTLSLSMYDASYWNSE-HADSMNLGFSSTLGPVSYSLNYAHSKNvnggynndS 562
Cdd:PRK15207 490 SDADSDYRRYHKRSQIQGNITQQLgAYGSVYFNMTQQDYWNDDgKQNSLSAGYNGRIGRVNYSVAYTWTKS--------P 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 563 DNYDDDNVFSLNLSVPFSafshseaarSVSANYSMNSSKNGDTTHNIGISGTAMQENQLNWQVSEGYNADSEATNGNVTV 642
Cdd:PRK15207 562 EWDESDRLWSFSMSIPLG---------RAWSNYRMTTDQNGRTNQQLGVSGTLLEDRNLSYSVQEGYTSNGVGNSGSVNL 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 643 GYQSTYADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVR 722
Cdd:PRK15207 633 GYQGGSGNISVGYNYSKDNQQVNYGVRGGVIVHSEGITLSQPLGESMAIISAPGARGAHVVNNGGVEVDWMGNAVVPYLT 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 723 PYHSNSISLNTvDASDTSAAIDNIAKTVVPTKGAVVRVKYNTWIGQKAMMTLTY-NGKPVPFGAvvTQTSGESDDTRSSI 801
Cdd:PRK15207 713 PYRETEVSLRS-DSLGQNVDLQEAFQKVVPTRGAIVRARFDTRVGYRVLMSLKQaNGNAVPFGA--TATLIDTTKEASSI 789
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 556412326 802 VGDGGEVYLVGLAGKGRLIVKWGETANKQCAVDYTLAGAKTEADILFINGVC 853
Cdd:PRK15207 790 VGEEGQLYISGMPEEGELQVSWGNDQAQQCRVPFRLPEQKDNTGIVMVNAVC 841
|
|
| PRK15198 |
PRK15198 |
outer membrane usher protein FimD; |
5-857 |
0e+00 |
|
outer membrane usher protein FimD;
Pssm-ID: 185120 [Multi-domain] Cd Length: 860 Bit Score: 577.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 5 KQTYVLS-LGLGLSVVFSSFSARAQEHFNPHLLETDSAEVPamDLSLFAK-DEVPPGDYNVDIFINGNLVDSKTLSFRR- 81
Cdd:PRK15198 3 RYTWCLAgVALSSLAILPPFLSYAESYFNPAFLSEDTASVA--DLSRFERgNHQPPGVYRVDIWRNDEFIGTQDIRFESt 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 82 -LKSAPTSDRTGACLNVTQLKAWNVRVdNYFGEQEKASE--CVDLFT-IPGADEKIDLAQQRFDLILPQVALFNTARGYV 157
Cdd:PRK15198 81 tVNTGDKSGGLMPCFTQELLERLGVNS-SAFPELAQQQDnkCINLLKaIPGAEIAFDFASMRLNISLPQIALLNSARGYI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 158 SPERWDEGITAGLLNYSVSGQQdlhqrnGTDSSNQFLSLQPGLNVGAWRFRNYSTYTHSESE----NDWDSVYTYASRDI 233
Cdd:PRK15198 160 PPEEWDEGIPAALLNYSFTGNR------GNDNDSYFLSLLSGLNYGPWRLRNNGAWNYFRGNgyhsEQWNNIGTWVQRAI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 234 KSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSD 313
Cdd:PRK15198 234 IPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITD 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 314 MYPTGSSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKtHQDGSGSRAEDFnFIQGSAAWGVGKGITLYG 393
Cdd:PRK15198 314 LNPTSSSGDLDVTVDEKDGNQQRYTVPYSTVPLLQREGRVKYDLVAGD-FRSGNSQQSSPF-FFQGTAIGGLPQGFTAYG 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 394 GyIQAEDNYSNLIAGTGFNMGSAGALSFDISQSWADIpqPDNMRqqehHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRG 473
Cdd:PRK15198 392 G-TQLAARYTAVLLGAGRNLGDWGAVSVDVTHARSQL--ADDSR----HEGQSLRFLYAKSLNTFGTNFQLLGYRYSTQG 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 474 YLSFQDF----LNDWDPGNSTIDNGR--------------ERNRFDVTISQTL-PFGTLSLSMYDASYWNSEHADS-MNL 533
Cdd:PRK15198 465 FYTLDDVayrsMEGYEYDYDSDGEHRdvpiiqsyhnlrfsKKGRFQLNISQSLgDYGSLYISGSHQKYWNTSDSNTwYQL 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 534 GFSSTLGPVSYSLNYAHSKNVNGGynndsdnyDDDNVFSLNLSVPFSAFSHSEAARSVS-----ANYSMNSSKNGDTTHN 608
Cdd:PRK15198 545 GYASGWQGISYSLSWSWNESVGIP--------GNDRIVGFNVSVPFSVLTKRRYTRDNAldrayATFNANRNSNGDNSWQ 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 609 IGISGTAMQENQLNWQVSEGYNADSEATnGNVTVGYQSTYADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDS 688
Cdd:PRK15198 617 TGVGGTLLEGRNLSYSVTQGDTSNNGYS-GSASANWQATYGTLGVGYNYDRDQHDVNWQLSGGVVGHEDGITFSQPLGDT 695
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 689 VALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYHSNSISLNTvDASDTSAAIDNIAKTVVPTKGAVVRVKYNTWIGQ 768
Cdd:PRK15198 696 NVLIKAPGAGGVRIENQTGVKTDWRGYAVMPYATVYRYNRVALDT-NTMGNSTDVENNVSSVVPTQGALVRANFDTRIGV 774
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 769 KAMMTLTYNGKPVPFGAVVTQTSGESddtrSSIVGDGGEVYLVGLAGKGRLIVKWGETANKQCAVDYTLAGAKTEADILF 848
Cdd:PRK15198 775 RALITVTQGGKPVPFGALVRETSSGI----TSMVGDDGQIYLSGLPLSGELLIQWGDGANSRCIAHYVLPEQSLQQAITV 850
|
890
....*....|
gi 556412326 849 INGVC-HPVS 857
Cdd:PRK15198 851 ISAVCtRPGS 860
|
|
| PRK15298 |
PRK15298 |
fimbrial outer membrane usher protein; |
21-854 |
0e+00 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185198 [Multi-domain] Cd Length: 848 Bit Score: 567.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 21 SSFS--ARAQEHFNPHLLETD-SAEVPAMDLSLFAKDEVP-PGDYNVDIFINGNLVDSKTLSFRRLKSAPTSDRTGACLN 96
Cdd:PRK15298 22 STFAhvAWARDYFNPAFIENHgQANRTSVDLSTFDNDKSQlPGTYYVTININKTEIGARNVDFQLATLSDGQQALQGCLR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 97 VTQLKAWNVRVDnYFGEQEKASECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITAGLLNYSVS 176
Cdd:PRK15298 102 LQELKDNGVKTD-LFPTLESEKGCVDLSVIPGASQRFDFQQQALSVSIPQLYIANNARGYVPPEKWQEGITALMLNYSFS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 177 GQQDL-HQRNGTDSSNQFLSLQPGLNVGAWRFRNYSTYTHSESEN-DWDSVYTYASRDIKSLKSQLVLGQGTTRGGIFDS 254
Cdd:PRK15298 181 GYKEYgSSEDSDDAESKYLALQPGFNLGPWRFRNYSNWSSNNGESgSWNSVYNYLQRDIIALKSQFTAGDSNTPSDVFDS 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 255 VGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQVVIKESDGTQ 334
Cdd:PRK15298 261 VPFRGLQLTSDDQMQPNSQRGYAPTIRGIARSNAQVIVRQNGYIAYQTAVSPGEFEINDMFPTGSNGDYDVTVKEADGSE 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 335 SSFIVPYATLPVLQREGQVQYGLVAGKtHQDGSGSRAEDFNfiQGSAAWGVGKGITLYGGYIQAEDNYSNLIAGTGFNMG 414
Cdd:PRK15298 341 QHFIVPYSSLPILQRTGRAKYSVTVGK-YRDYNNHTLDDFG--QATLLYGLPWGITLYGGSQIAGDKYQSVAFGVGQNMQ 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 415 SAGALSFDISQSWADIpqpDNMRQQehhSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFLNdwdPGNSTIDN- 493
Cdd:PRK15298 418 MLGAISLDGIWSHAKF---DDGRKE---IGQSWRVRYSKGVVSTGTTFSLAGYRYASENYNSLSEVIN---PDDDFYDNy 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 494 GRERNRFDVTISQTLP--FGTLSLSMYDASYWNS-EHADSMNLGFSSTLGPVSYSLNYAHSKNV-------NGGYNNDSD 563
Cdd:PRK15298 489 GKRHNRFEASVNQQISntLGSLTLSWVKEDYWHSaQQMESLSASYNNSWGPVSYTLSYSYNKNTyqyrsdnDDDDNDDDR 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 564 NYDDDNVFSLNLSVPFSAFShseaaRSVSANYSMNSSKNGDTTHNIGISGTAMQENQLNWQVSEGYNAdSEATNGNVTVG 643
Cdd:PRK15298 569 YNQNDRLFTLSLHVPFTVFD-----SRLYASYMLNTRKHDATVNSTTLSGTALRDRNLNWSLQQSHST-QDGDSGGVNAS 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 644 YQSTYADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRP 723
Cdd:PRK15298 643 YKGTYANLNAGYNQSPDSQQVSYGISGGILAHENGITLSQPITGAAILIKAPGASGVSVENQTGVATDFRGYTVIPNVTP 722
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 724 YHSNSISLntvdasDTSAAIDNI-----AKTVVPTKGAVVRVKYNTWIGQKAMMTLT-YNGKPVPFGAvvTQTSGESDDT 797
Cdd:PRK15298 723 YYRYDISL------DSSTFADNVdiplnNQTVYPTRNAVVRAAYDTHKGYRVLLTLTrSNGEPVPFGA--TASVDGQDAN 794
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 556412326 798 RSSIVGDGGEVYLVGLAGKGRLIVKWGETAnkqCAVDYTLAGAKTEADILFINGVCH 854
Cdd:PRK15298 795 LASIVGDKGQVFLSGLPEEGLLLVNWGSAS---CRADYRLDISKNMNGIVMANAVCQ 848
|
|
| Usher |
pfam00577 |
Outer membrane usher protein; In Gram-negative bacteria the biogenesis of fimbriae (or pili) ... |
193-762 |
0e+00 |
|
Outer membrane usher protein; In Gram-negative bacteria the biogenesis of fimbriae (or pili) requires a two- component assembly and transport system which is composed of a periplasmic chaperone and an outer membrane protein which has been termed a molecular 'usher'. The usher protein is rather large (from 86 to 100 Kd) and seems to be mainly composed of membrane-spanning beta-sheets, a structure reminiscent of porins. Although the degree of sequence similarity of these proteins is not very high they share a number of characteriztics. One of these is the presence of two pairs of cysteines, the first one located in the N-terminal part and the second at the C-terminal extremity that are probably involved in disulphide bonds. The best conserved region is located in the central part of these proteins.
Pssm-ID: 425762 [Multi-domain] Cd Length: 549 Bit Score: 557.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 193 FLSLQPGLNVGAWRFRNYSTYTHSES-ENDWDSVYTYASRDIKSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPD 271
Cdd:pfam00577 1 YLNLQSGLNLGAWRLRNDSNWTQSRGnTGKWQNSRTYLQRAIPQLKSRLTLGESYTSSDIFDSFSFRGVQLASDDNMLPD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 272 SMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQVVIKESDGTQSSFIVPYATLPVLQREG 351
Cdd:pfam00577 81 SLRGYAPVIRGIARTNARVTIRQNGYVIYQTLVPPGPFEITDLYPTGSSGDLDVTVEEADGSVQTFTVPYSSVPLLLRPG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 352 QVQYGLVAGKTHQDGSGSRAEDfnFIQGSAAWGVGKGITLYGGyIQAEDNYSNLIAGTGFNMGSAGALSFDISQSWAdip 431
Cdd:pfam00577 161 QVRYSLAAGRYRSGNSDQESPF--FFQATASWGLPNGLTLYGG-LQGADDYQAAALGLGRNLGDLGALSVDVTQSRS--- 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 432 QPDNmrqQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFLNDWDPGNSTIDN-GRERNRFDVTISQTLP- 509
Cdd:pfam00577 235 QLDN---QSSEQGQSYRFLYNKSLNETGTNFQLAGYRYSTRGFYTLADALDARMDGFDYYNLtYNKKNSYQLNVSQSLGg 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 510 FGTLSLSMYDASYWNSEHAD-SMNLGFSSTLGPVSYSLNYAHSKNVNggynndsdNYDDDNVFSLNLSVPFsafshSEAA 588
Cdd:pfam00577 312 WGSLYLSGSRQTYWGTSGTSyNLQLGYNTNIGRVSVSLSWSYSRNEY--------ENGEDDLLYLNLSIPF-----GRGL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 589 RSVSANYSMNSSKNGDTTHNIGISGTAMqENQLNWQVSEGYnADSEATNGNVTVGYQSTYADMSAGYSYDDYSRRVNYSL 668
Cdd:pfam00577 379 SRANSSYSMTRNNSGRTTSNTGVYGTLL-DDNLSYSVNAGR-ASDGRHTGSGNLSYQGSYGTVSGSYSYGRDYRQLNYSV 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 669 RGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYHSNSISLNTVDaSDTSAAIDNIAK 748
Cdd:pfam00577 457 SGGIVAHAHGVTLSQYLGDTRALIDAPGAAGVRVNNQTGVKTDWRGYAVVPYLTPYRENRVELDTND-LPDDVDLENTVV 535
|
570
....*....|....
gi 556412326 749 TVVPTKGAVVRVKY 762
Cdd:pfam00577 536 QVVPTEGAVVYARF 549
|
|
| PRK15223 |
PRK15223 |
fimbrial biogenesis outer membrane usher protein; |
11-853 |
2.42e-176 |
|
fimbrial biogenesis outer membrane usher protein;
Pssm-ID: 185145 [Multi-domain] Cd Length: 836 Bit Score: 530.36 E-value: 2.42e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 11 SLGLGLSVVFSSFSARAQeHFNPHLLeTDSAEvpAMDLSLFAKDEVPPGDYNVDIFINGNLVDSKTLSFRRLKSAPTSDR 90
Cdd:PRK15223 7 ALLLFIAGVVHCANAHTY-TFDASML-GDAAK--GVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGTPF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 91 TGACLNVTQLKAWNVRVDNYFGEQEKAS---ECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGIT 167
Cdd:PRK15223 83 LAPCLTVSQLSRYGVKTEDYPQLWKAAKtpdECADLTAIPQAKAVLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIP 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 168 AGLLNYSV-SGQQDLHQRNGTDSSNQFLSLQPGLNVGAWRFRNYSTYTHSESEN-DWDSVYTYASRDIKSLKSQLVLGQG 245
Cdd:PRK15223 163 AFLMNYSArTTQTDYKMDMERRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSgKWQAAYTYAERGLYSLKSRLTLGQK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 246 TTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQV 325
Cdd:PRK15223 243 TSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSVTDSSGDLHV 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 326 VIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQdgSGSRAEDFNFIQGSAAWGVGKGITLYGGyIQAEDNYSNL 405
Cdd:PRK15223 323 TVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRS--SDSATDKAQIAQATLMYGLPWNLTAYGG-IQSATHYQAA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 406 IAGTGFNMGSAGALSFDISQSWADIPQpDNMRQqehhsGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFLNDWD 485
Cdd:PRK15223 400 SLGLGGSLGRWGSLSVDGSDTHSQRQG-EAVQQ-----GASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYR 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 486 PGNSTID----NGRERNRFDVTISQTL--PFGTLSLSMYDASYWNSE-HADSMNLGFSSTLGPVSYSLNYAHSKNVnggy 558
Cdd:PRK15223 474 HDGNRLWswreNLQPSSRTTLMLSQSWgrHLGNLSLTGSRTDWRNRPgHDDSYGLSWGTSIGGGSLSLNWNQNRTL---- 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 559 nNDSDNYDDDNVFSLNLSVPFSAFShseaARSVSANYSMNSSKNGDTTHNIGISGTAMqENQLNWQVSEGYNADSEATNG 638
Cdd:PRK15223 550 -WRNGAHRKENITSLWFSMPLSRWT----GNNVSASWQMTSPSHGGQTQQVGVNGEAF-SQQLDWEVRQSYRADAPPGGG 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 639 N---VTVGYQSTYADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGN 715
Cdd:PRK15223 624 NnsaLHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGIVIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGD 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 716 AIVPYVRPYHSNSISLNTVDASDtSAAIDNIAKTVVPTKGAVVRVKYNTWIGQKAMMTLTY-NGKPVPFGAVVTqtsGES 794
Cdd:PRK15223 704 TTVGNLNVYQENTVSLDPSRLPD-DAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKReDGSAIPFGAQVT---VNG 779
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 556412326 795 DDTRSSIVGDGGEVYLVGLAGKGRLIVKWGetaNKQCAVDYTLAGAKTEADILFINGVC 853
Cdd:PRK15223 780 QDGSAALVDTDSQVYLTGLADKGELTVKWG---AQQCRVNYQLPAHKGIAGLYQMSGLC 835
|
|
| PRK09828 |
PRK09828 |
putative fimbrial outer membrane usher protein; Provisional |
10-854 |
5.76e-155 |
|
putative fimbrial outer membrane usher protein; Provisional
Pssm-ID: 182098 [Multi-domain] Cd Length: 865 Bit Score: 475.78 E-value: 5.76e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 10 LSLGLGLSVVFSSFSARAQE-HFNPHLLETDSAEvpAMDLSLFAK-DEVPPGDYNVDIFINGNLVDSKTLSFRRLKSapt 87
Cdd:PRK09828 14 TRLATFCALLYSNSAACAELvEYDHTFLMGQGAS--NIDLSRYSEgNPTLPGTYDVSVYVNDQPISSQSIPFIDIGK--- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 88 sDRTGACL---NVTQL----KAWNVRVDNYFGEQEKASECVDLFT-IPGADEKIDLAQQRFDLILPQVALFNTARGYVSP 159
Cdd:PRK09828 89 -KNAQACItlkNLLQFhiksPDINNEKAILLARDDELGDCLNLTKiIPQASVRYDVSDQRLDIDVPQAWVMKNYQGYVDP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 160 ERWDEGITAGLLNYSVSGQQDlhQRNGTDSSNQFLSLQPGLNVGAWRFRNYSTYT-HSESENDWDSVYTYASRDIKSLKS 238
Cdd:PRK09828 168 SLWENGINAAMLSYNLNGYHS--ESPGRTNDSIYAAFNGGINLGAWRLRARGNYNwMTDSGSDYDFQNRYLQRDIAALRS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 239 QLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTG 318
Cdd:PRK09828 246 QLIIGESYTTGETFDSVSIRGIRLYSDSRMLPPGLASYAPIIRGVANSNAKVTITQSGYKIYETTVPPGAFVIDDLSPSG 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 319 SSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQDgsgSRAEDFNFIQGSAAWGVGKGITLYGGyIQA 398
Cdd:PRK09828 326 YGSDLIVTIEEADGSKRTFSQPFSSVVQMLRPGVGRWDISAGQVLDD---SLQDEPNLGQASYYYGLNNYLTGYTG-IQY 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 399 EDN-YSNLIAGTGFNMgSAGALSFDISQSWADIPqpdnmrQQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSF 477
Cdd:PRK09828 402 TDNnYTAGLLGLGMNT-SVGAFAFDVTHSNAEIP------DDKTYQGQSYRLTWNKLFEATSTSFNVAAYRYSTQDYLGL 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 478 QDFLN--------DWDPGNSTIDN-GRERNRFDVTISQTLPF-----GTLSLSMYDASYWNSEHADS-MNLGFSSTLGPV 542
Cdd:PRK09828 475 NDALTlidevkhpEQDLEPKSMRNySRMKNQVTVSINQPLKFekkdyGSFYLSGSWSDYWASGQSRSnYSVGYSNSASWG 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 543 SYSLNYAHSKNVNGGYNNDSDnydddnvfsLNLSVPFSAFSHSEAARS--VSANYSMNSSKNGDTTHNIGISGTAmQENQ 620
Cdd:PRK09828 555 SYSVSLQRSWNEDGEKDDSVY---------LSFSIPIENLLGTERRSSgfQSIDTQLNSDFKGNNQLNVSSSGNS-EDNR 624
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 621 LNWQVSEGYNADSEATNGNVTVGY---QSTYADMSAGYSY-DDYSRRVNYSLRGGMVLHRDGITLARQL---NDSVALVE 693
Cdd:PRK09828 625 ISYSVNTGYSMNKNSKDLSYVGGYasyESPWGTLSGSASAsSDNSRQYSLSTDGGFVLHSGGLTFSNDSfsdSDTLALVK 704
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 694 TPGVSGMPINGqTNVHTDYFGNAIVPYVRPYHSNSISLNtVDASDTSAAIDNIAKTVVPTKGAVVRVKYNTWIGQKAMMT 773
Cdd:PRK09828 705 APGAKGARINY-GNSTIDRWGYGVTSALSPYRENRVALD-INTLENDVELKSTSAVAVPRQGAVVLADFETDQGRSAIMN 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 774 LTYN-GKPVPFGAVVTQTSGESDDTrssiVGDGGEVYLVGLAGKGRLIVKW-GETANKQCAVDYTL-AGAKTEADILFIN 850
Cdd:PRK09828 783 ITRSdGKNIPFAADVYDEQGNVIGN----VGQGGQAFVRGIEDQGELRIRWlEEGKPVSCLAHYQQpATAEKIGQTIILN 858
|
....*
gi 556412326 851 GV-CH 854
Cdd:PRK09828 859 GItCQ 863
|
|
| PRK15248 |
PRK15248 |
fimbrial outer membrane usher protein; |
11-853 |
2.12e-123 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185160 [Multi-domain] Cd Length: 853 Bit Score: 392.67 E-value: 2.12e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 11 SLGLGLSVVFSSFSARAQEHFNPHLLETDSAevpAMDLSLFAKDEVPPGDYNVDIFINGNLVDSKTLSfrRLKSAPTSDR 90
Cdd:PRK15248 11 SLALLIAIVCSGSAQGEEYYFDPALLQGATY---GQNIARFNEQQTPSGDYLADVYVNGTLVTSSTNI--RFNAVKEGQQ 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 91 TGACLNVTQLKAWNVRVdnyFGEQEKASECVDL-FTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITAG 169
Cdd:PRK15248 86 TEPCLPLSVMKAAQIKS---LPATDAATECRPLrEWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 170 LL----NYSVSGQQDLHQRNgtdssnQFL--SLQPGLNVGAWRFRN-----YSTYTHSESENDWDSVYTYASRDIKSLKS 238
Cdd:PRK15248 163 FLrhntNWTHTENTDSHYRY------QYLwsGLNMGVNLGLWQVRHqsnlrYANSNQSGSAWRYNSVRTWVQRPVASINS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 239 QLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTG 318
Cdd:PRK15248 237 ILSLGDSYTDSSLFGSLSFNGIKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTR 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 319 SSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQdgsGSRAEDfNFIQGSAAWGVGKGITLYGGYIQA 398
Cdd:PRK15248 317 YQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQ---YYDIEN-RFFEGTFQHGVNNTITLNLGSRIA 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 399 EDnYSNLIAGtGFNMGSAGAlsFDISQSWADIPQPDNMRQQehhsGQSYRVRYSKTLqQTNTDIAVAGYKFSTRGYLSFQ 478
Cdd:PRK15248 393 QR-YQAWLAG-GVWATGMGA--FGLNATWSNARAEHNDRQQ----GWRAELSYSKTF-TTGTNLVLAAYRYSTNGFRDLQ 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 479 DFLNDWDPGNSTI----DNGRERNRFDVTISQTLP-FGTLSLSMYDASYWNSE-HADSMNLGFSSTLGPVSYSLNYAHSK 552
Cdd:PRK15248 464 DVLGVRREAKTGIdyysDTLHQRNRLSATVSQPLGrLGTLNLSASTADYYNNQsRITQLQMGYSNQWRNISYGVNIARQR 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 553 N----------VNGGYNNDSDNYDDDNVFSLNLSVPFSAfshseAARSVSANYSMNSSKNGDTThNIGISGTAMQENQLN 622
Cdd:PRK15248 544 TtwdydrfyhgVNEPLDVSSRQKYTETTMSFNVSIPLDW-----GENRTSVAMNYNQSSQSRSS-TVSMTGSSGENSDLS 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 623 WQVSEGY----NADSEAT-----NGNVTvgyQST-YADMSAGYSYDDYSRRVNYSLRGGMVLHRDGITLARQLNDSVALV 692
Cdd:PRK15248 618 WSVYGGYeryrNSNSDSSapttfGGNLQ---QNTrFGALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALI 694
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 693 ETPGVSGMPI-NGQTNVhTDYFGNAIVPYVRPYHSNSISLNTVDASdTSAAIDNIAKTVVPTKGAVVRVKYNTWIGQKAM 771
Cdd:PRK15248 695 HADGAQGAIVqNGQGAV-VDRFGYAILPSLSPYRVNNVTLDTRKMR-SDAELTGGSQQIVPYAGAIARVNFATISGKAVL 772
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 772 MTLTY-NGKPVPFGAVVTQTSGESddtrSSIVGDGGEVYLVGLAGKGRLIVKWGETANKQCAVDYTLAGaKTEADILFIN 850
Cdd:PRK15248 773 ISVKMpDGGIPPMGADVFNGEGTN----IGMVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDL-HTKEPFLYLN 847
|
...
gi 556412326 851 GVC 853
Cdd:PRK15248 848 KIC 850
|
|
| PRK15217 |
PRK15217 |
fimbrial outer membrane usher protein; Provisional |
58-810 |
4.31e-117 |
|
fimbrial outer membrane usher protein; Provisional
Pssm-ID: 185139 [Multi-domain] Cd Length: 826 Bit Score: 375.27 E-value: 4.31e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 58 PGDYNVDIFINGNLVDSKTLSfrrLKSAPTSdrtgACLNVTQLKAWNVRVDNyfgeQEKASECVDLFT-IPGADEKIDLA 136
Cdd:PRK15217 53 PGQYEIDIYVNKQWRGKYEII---VKDNPQE----TCLSRELIKRLGIKSDN----FATEKQCITLKQlVQGGSYTWDIG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 137 QQRFDLILPQVALFNTARGYVSPERWDEGITAGLLNYSVSgQQDLHQRNGTDSSNQFLSLQPGLNVGAWRFRNYSTYTHS 216
Cdd:PRK15217 122 VFRLDLSVPQAYVEELEAGYVPPENWDRGINAFYTSYYAS-QYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKT 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 217 ESEN-DWDSVYTYASRDIKSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQN 295
Cdd:PRK15217 201 DNNPgEWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSVRFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQN 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 296 GHSIYKATVPPGPFEFSDMYPTGSSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQDGSgSRAEDfn 375
Cdd:PRK15217 281 GFVVYQKEVPPGPFAIADLQLAGGGADLDVSVKEADGSVTTYLVPYASVPNMLQPGVSKYDFAAGRSHIEGA-SKQSD-- 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 376 FIQGSAAWGVGKGITLYGGYIQAeDNYSNLIAGTGFNMgSAGALSFDISQSWAdipQPDNmrqQEHHSGQSYRVRYSKTL 455
Cdd:PRK15217 358 FVQAGYQYGFNNLLTLYGGTMLA-NNYYAFTLGTGWNT-RIGAISVDATKSHS---KQDN---GDVFDGQSYQIAYNKYL 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 456 QQTNTDIAVAGYKFSTRGYLSFQDFL------------ND-WDPGNSTIDNGRERNRFDVTISQTLP--FGTLSLSMYDA 520
Cdd:PRK15217 430 SQTSTRFGLAAWRYSSRDYRTFNDHVwannkdnyrrdeNDvYDIADYYQNDFGRKNSFSANISQSLPegWGSVSLSALWR 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 521 SYWN-SEHADSMNLGFSSTLGPVSYSLNYAHSKNVNggynndsdnYDDDNVFSLNLSVPFS-AFSHSEAARSVSANYSMN 598
Cdd:PRK15217 510 DYWGrSGSSKDYQLSYSNNWQRISYTLSASQTYDEN---------HHEEKRFNIFISIPFDwGDDVTTPRRQIYLSNSTT 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 599 SSKNGDTTHNIGISGTAMQENQLNWQVSEGYNADSEATNGNVTVGYQSTYADMSAGYSYDDYSRRVNYSLRGGMVLHRDG 678
Cdd:PRK15217 581 FDDQGFASNNTGLSGTAGSRDQFNYGVNLSHQRQGNETTAGANLTWNAPVATVNGSYSQSSNYRQAGGSISGGLVAWSGG 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 679 ITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYHSNSISLNtVDASDTSAAIDNIAKTVVPTKGAVV 758
Cdd:PRK15217 661 VNLANRLSDTFAIMNAPGLEGAYVNGQKYRTTNRKGVVVYDGLTPYRENHLMLD-VSQSDSETELRGNRKIAAPYRGAVV 739
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 556412326 759 RVKYNT-----WIgqkaMMTLTYNGKPVPFGAVVTQTSGESddtrSSIVGDGGEVYL 810
Cdd:PRK15217 740 LVNFDTdqrkpWF----IKALRADGQPLTFGYEVNDIHGHN----IGVVGQGSQLFI 788
|
|
| PRK15235 |
PRK15235 |
outer membrane fimbrial usher protein SefC; Provisional |
40-853 |
6.06e-116 |
|
outer membrane fimbrial usher protein SefC; Provisional
Pssm-ID: 185150 [Multi-domain] Cd Length: 814 Bit Score: 372.14 E-value: 6.06e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 40 SAEVPAMDLSLFAKDEVPPGDYNVDIFINGNLVDSKTLSFRRLksaptSDRTGACLNVTQLKAWNVRVDNYFGEQEKASE 119
Cdd:PRK15235 31 SLSLPPGENASFLSVETLPGNYVVDVYLNNQLKETTELYFKSM-----TQTLEPCLTKEKLIKYGIAIQELHGLQFDNEQ 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 120 CVDLFTIPgADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITAGLLNYSVSGqqdLHQRNGTDSSnQFLSLQPG 199
Cdd:PRK15235 106 CVLLEHSP-LKYTYNAANQSLLLNAPSKILSPIDSEIADENIWDDGINAFLLNYRANY---LHSKVGGEDS-YFGQIQPG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 200 LNVGAWRFRNYSTYTHSESENDWDSVYTYASRDIKSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPV 279
Cdd:PRK15235 181 FNFGPWRLRNLSSWQNLSSEKKFESAYIYAERGLKKIKSKLTVGDKYTSADLFDSVPFRGFSLNKDESMIPFSQRTYYPT 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 280 IRGIARSNAEVTVYQNGHSIYKATVPPGPFEF--SDMYPTG-SSGDLQVVIKESDGTQSSFIVPYATlPVLQ-REGQVQY 355
Cdd:PRK15235 261 IRGIAKTNATVEVRQNGYLIYSTSVPPGQFEIgrEQIADLGvGVGVLDVSIYEKNGQVQNYTVPYST-PVLSlPDGYSKY 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 356 GLVAGKTHQdgSGSRAEDFNFIQGSAAWGVGKGITLYGGyIQAEDNYSNLIAGTGFNMGSAGALSFDISQSwadIPQPDN 435
Cdd:PRK15235 340 SVTIGRYRE--VNNDYIDPVFFEGTYIYGLPYGFTLFGG-VQWANIYNSYAIGASKDIGEYGALSFDWKTS---VSKTDT 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 436 mrqqEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFLNdwdpgNSTIDNGRERNRFDVT---ISQTL-PFG 511
Cdd:PRK15235 414 ----SNENGHAYGIRYNKNIAQTNTEVSLASHYYYSKNYRTFSEAIH-----SSEHDEFYDKNKKSTTsmlLSQALgSLG 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 512 TLSLSMYDASYWNSEHADSMNLGFSSTLGPVSYSLNYAHSKNvnggynndSDNYDDDNVFSLNLSVPFSAFSHSEaarsV 591
Cdd:PRK15235 485 SVNLSYNYDKYWKHEGKKSIIASYGKNLNGVSLSLSYTKSTS--------KISEENEDLFSFLLSVPLQKLTNHE----M 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 592 SANYSMNSSKNGDTTHNIGISGTAMqENQLNWQVS---EGYNADSEATNGNVTvgYQSTYADMSAGYSYDDYSRRVNYSL 668
Cdd:PRK15235 553 YATYQNSSSSKHDMNHDLGITGVAF-DSQLTWQARgqiEDKSKNQKATFLNAS--WRGTYGEIGANYSHNEINRDIGMNV 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 669 RGGMVLHRDGITLARQLNDSVALVETPGVSGMPINGQTNVHTDYFGNAIVPYVRPYHSNSISLNTVDASdTSAAIDNIAK 748
Cdd:PRK15235 630 SGGVIAHSSGITFGQSISDTAALVEAKGVSGAKVLGLPGVRTDFRGYTISSYLTPYMNNFISIDPTTLP-INTDIRQTDI 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 749 TVVPTKGAVVRVKYNTWIGQKAMMTLT-YNGKPVPFGAVVTQTSGESDDTRSSIVGDGGEVYLVGLAGKGRLIVKWGETA 827
Cdd:PRK15235 709 QVVPTEGAIVKAVYKTSVGTNALIRITrTNGKPLALGTVLSLKNNDGVIQSTSIVGEDGQAYVSGLSGVQKLIASWGNKP 788
|
810 820
....*....|....*....|....*.
gi 556412326 828 NKQCAVDYTLAGaKTEADILFINGVC 853
Cdd:PRK15235 789 SDTCTVFYSLPD-KNKGQISFLNGVC 813
|
|
| PRK15284 |
PRK15284 |
putative fimbrial outer membrane usher protein StfC; Provisional |
9-831 |
1.71e-100 |
|
putative fimbrial outer membrane usher protein StfC; Provisional
Pssm-ID: 185184 [Multi-domain] Cd Length: 881 Bit Score: 332.60 E-value: 1.71e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 9 VLSLGLGLSVVFSSFSARAQE--HFNPHLLETDSAEvpAMDLSLFA-KDEVPPGDYNVDIFINGN-LVDSKTLSFRRLKS 84
Cdd:PRK15284 11 ILAWCIALAMSGGYVNAWAEDdiQFDSRFLELKGDT--KIDLKRFSsKGYVEPGKYNLQVQLNKQpLAEEYDIYWYASEN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 85 APtsDRTGACLN---VTQLKAWNVRVDNYfgEQEKASECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPER 161
Cdd:PRK15284 89 DP--SKTYACLTpelVAQLGLKEDIAKNL--QWIHDGKCLKPGQLEGMEIKADLSQSALVISLPQAYLEYTDPDWDPPSR 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 162 WDEGITAGLLNYSVSGQQDlHQRNGTDSSNQFL-SLQPGLNVGAWRFRN--YSTYTH------------SESENDWDSVY 226
Cdd:PRK15284 165 WDDGIPGLIADYSINAQTR-HEENGGDDSNDISgNGTVGVNLGAWRLRAdwQTNYQHtrsnddddefsgSSTQKNWDWSR 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 227 TYASRDIKSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPP 306
Cdd:PRK15284 244 YYAWRALPSLKAKLALGEDYLNSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 307 GPFEFSDMYPTgSSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKThQDGSGSRAEDFnFIQGSAAWGVG 386
Cdd:PRK15284 324 GPFRIQDIGDS-VSGTLHVRIEEQNGQVQEYDVSTASMPFLTRPGQVRYKLMMGRP-QDWGHHVEGGF-FSGAEASWGIA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 387 KGITLYGGYIqAEDNYSNLIAGTGFNMGSAGALSFDISQSWADIPQpDNMRQQEHHSGQSYRVRYSKTLQQTNTDIAVAG 466
Cdd:PRK15284 401 NGWSLYGGAL-GDENYQSAALGVGRDLALFGAVAFDVTHSHTKLDK-DSAYGKGSLDGNSFRVSYAKDFDELNSRVTFAG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 467 YKFSTRGYLSFQDFLNDWDpgNSTIDNGRERNRFDVTISQTlpFGTLSLSMY----DASYWNSEHADSMNLGFS-----S 537
Cdd:PRK15284 479 YRFSEENFMTMSEYLDASD--SDMVRTGNDKEMYTATYNQN--FRDAGVSVYlnytHHTYWDRPEQTNYNLMLShyfnmG 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 538 TLGPVSYSLN---YAHSKNVNGGYNndsdnydddnvfsLNLSVPFSafshseAARSVSANYSMNSsknGDTTHNIGISGT 614
Cdd:PRK15284 555 SIRNMSISVTgyrYEYDNQADKGVY-------------ISLSIPWG------DNSTVSYNGNYGS---GSDSSQVGYFSR 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 615 AmqENQLNWQVSEGYNADSEATNGNVTvgYQSTYA--DMSAGYSYDDYsRRVNYSLRGGMVLHRDGITLARQLN--DSVA 690
Cdd:PRK15284 613 V--DDATHYQLNVGTSDNHTSVDGYYS--HDGSLAqvDLSANYHEGQY-TSAGLSLQGGATLTAHGGALHRTQNmgGTRL 687
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 691 LVETPGVSGMPINGQ-TNVHTDYFGNAIVPYVRPYHSNSISLNTVDASDTSAAIDNIAKTVVpTKGAVVRVKYNTWIGQK 769
Cdd:PRK15284 688 LIDADGVANVPVEGNgAAVYTNMFGKAVVADVNNYYRNQAYIDLNNLPEDAEATQSVVQATL-TEGAIGYRKFAVISGQK 766
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 556412326 770 AMMTLTY-NGKPVPFGAVVTQtsgeSDDTRSSIVGDGGEVYLVGLAGKGRLIVKWGETAnkQC 831
Cdd:PRK15284 767 AMAVLRLrDGSHPPFGAEVKN----DNQQQVGLVDDDGNVYLAGVKPGEHMQVFWEGVA--HC 823
|
|
| PRK15255 |
PRK15255 |
fimbrial outer membrane usher protein StdB; Provisional |
9-823 |
7.26e-97 |
|
fimbrial outer membrane usher protein StdB; Provisional
Pssm-ID: 185167 [Multi-domain] Cd Length: 829 Bit Score: 321.71 E-value: 7.26e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 9 VLSLGLGLSVVFSSFSARAQEhFNPHLLetDSAEVPAMDLSLFAKD-EVPPGDYNVDIFINGNLVDSKTLSfrRLKSAPT 87
Cdd:PRK15255 3 ITRLAILITLTFSVLKSQATE-FNASLL--DSGNLSNVDLTAFSREgYVAPGNYILDIWLNDQPVREQYPV--RVVPVAG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 88 SDRTGACLNVTQLKAWNVRVDNYFGEQEKAS----ECVDLFTipgADEKIDLA--QQRFDLILPQVALFNTARGYVSPER 161
Cdd:PRK15255 78 RDAAVICVTTDMVAMLGLKDKIIHGLKPVTGipdgQCLELRS---ADSQVRYSaeNQRLTFIIPQAWMRYQDPDWVPPSR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 162 WDEGITAGLLNYSVSGQQDLHQRnGTDSSNQFLSLQPGLNVGAWRFRNYSTYT-----HSESENDWDSVYTYASRDIKSL 236
Cdd:PRK15255 155 WSDGVTAGLLDYSLMVNRYMPQQ-GETSTSYSLYGTAGFNLGAWRLRSDYQYSrfdsgQGASQSDFYLPQTYLFRALPAL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 237 KSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMyP 316
Cdd:PRK15255 234 RSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-S 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 317 TGSSGDLQVVIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGK-----THQDGSGSRaedfNFIQGSAAWGVGKGITL 391
Cdd:PRK15255 313 QNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplyggTHNNSTVSP----DFLLGEATWGAFNNTSL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 392 YGGYIQAEDNYSNLIAGTGFNMGSAGALSFDISQSWADIPqpdnmrQQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFST 471
Cdd:PRK15255 389 YGGLIASTGDYQSAALGIGQNMGLLGALSADVTRSDARLP------HGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSD 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 472 RGYLSFQDFLNdwdpgNSTIDNG---RERNRFDVTISQTLPFGTLS--LSMYDASYWNSEHAD----SMNLGFS-STLGP 541
Cdd:PRK15255 463 RHFLSMPEYLQ-----RRATDGGdawHEKQSYTVTYSQSVPVLNMSaaLSVSRLNYWNAQSNNnymlSFNKVFSlGDLQG 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 542 VSYSLNYAHSKNVNGGYNNDSDNydddnvfslNLSVPFSafshseAARSVSanYSMNSSKNGDTTHNIGISGtaMQENQL 621
Cdd:PRK15255 538 LSASVSFARNQYTGGGSQNQVYA---------TISIPWG------DSRQVS--YSVQKDNRGGLQQTVNYSD--FHNPDT 598
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 622 NWQVSEGYNADSEATNGNVTVGYQSTY----ADMSAGYSYDDYsRRVNYSLRGGMVLHRDGITLARQL--NDSVALVETP 695
Cdd:PRK15255 599 TWNISAGHNRYDTGSNSSFSGSVQSRLpwgqAAADATLQPGQY-RSLGLSWYGSVTATAHGAAFSQSMagNEPRMMIDTG 677
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 696 GVSGMPINGQTNVhTDYFGNAIVPYVRPYHSNSISLNtVDASDTSAAIDNIAKTVVPTKGAVVRVKYNTWIGQKAMMTLT 775
Cdd:PRK15255 678 DVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVD-VAALPEDVDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIR 755
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|.
gi 556412326 776 Y-NGKPVPFGAVVtqTSGESDDTrSSIVGDGGEVYLVGLAGKGR--LIVKW 823
Cdd:PRK15255 756 LaDGASPPFGALV--VSGKTGRT-AGMVGDDGLAYLTGLSGEDRrtLNVSW 803
|
|
| PRK15213 |
PRK15213 |
outer membrane usher protein PefC; |
11-793 |
4.03e-88 |
|
outer membrane usher protein PefC;
Pssm-ID: 237926 [Multi-domain] Cd Length: 797 Bit Score: 297.04 E-value: 4.03e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 11 SLGLGLSVVFSSFSARAQEHFNPHLLETDSAEVPAMdlsLFAKDEVPPGDYNVDIFINGNLVDSKTLSFrrlksAPtSDR 90
Cdd:PRK15213 12 ALALAIFTHLGFASAVAGEELNMSFIQGGGGIPPEV---LASNGDYPPGRYLVDVIFNGKKIGKAILSI-----TP-QEA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 91 TGACLNVTQLKAWNVRVD-NYFGEQEKAS-ECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARgyvsPERWDEGITA 168
Cdd:PRK15213 83 EALCLSPEWLKKAGIPVSlEYYRSGYDAArQCYVLSKAPSVQVDFDYSTQSLTLSIPQAGLVKKPE----PVEWDYGVPA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 169 GLLNYSVSGQQdlhqrNGTDSSNQFLSLQPGLNVGAW-RFRNYSTYTHSESENDWDSVYTYASRDIKSLKSQLVLGQGTT 247
Cdd:PRK15213 159 FRLNYSANASK-----TSRQNTSAYGNADLKANLGRWvLSSRASASRGAGGSNEFTTNDFTLTTAIKSLQGDLLVGKTQT 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 248 RGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTGsSGDLQVVI 327
Cdd:PRK15213 234 GNSLLGSFGFYGASLRSNNDMLPWENRGYAPVISGIANGPSRVTISQNGYTLYSEVVPAGPFQLDDVPLVG-SGDLTVTV 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 328 KESDGTQSSFIVPYATLPVLQREGQVQYGLVAGKTHQDGSGSRAEDFNFIQGSAAWGVgKGITLYGGYIqAEDNYSNLIA 407
Cdd:PRK15213 313 EEEDGHKTTQVFPVAVLPGLLRPGEHEYNVAAGLKDDNYDLKKPENGLFFAGSYGYGF-DGLTLNAAGI-LNQNYQGGGV 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 408 GTGFNMGSAGALSFDISQSWAdipqpdNMRQQEHHSGQSYRVRYSKTLQQTNTDIAVAgYKFSTRGYLSFQDFlndwDPG 487
Cdd:PRK15213 391 GVVQGLGYFGAVSASGNLSQA------KYQNGDNKSGNSVSLKYAKSLSDTNNLQLLS-YRYQSEGYVDFADF----YPT 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 488 NSTIdNGRERNRFDVTISQTL--PFGTLSLSMYDASYWNSEHADS-MNLGFSSTLGPVSYSLNYAHSKNVNGGYNNDSDn 564
Cdd:PRK15213 460 DLYT-RSNTKRRYEDIFSQGLsqSLFFLSLSGWQEDYWPSSGKETgATVSLSTTIKGVSVNLNGSYSKRNSLGENDYSA- 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 565 ydddnvfSLNLSVPFSAFShseaaRSVSANYSMNSSKNGDTTHNIGISGTamqenqLNWQVSEGYNADSE---ATNGNVT 641
Cdd:PRK15213 538 -------SLSISIPFTLFD-----KRHYSSTSVSYSRSGGTGFNSGVSGS------LNDRLSYGLNTNRDrdgGRSSSLN 599
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 642 VGYQSTYADMSAGYSYD-DYSRRVNYSLRGGMVLHRD-GITLARQLNDSVALVETPGVSGMPINGqtNVHTDYFGNAIVP 719
Cdd:PRK15213 600 ASYGFDRAQTNGMLSHQgGGNTSGSVSVSGSVLGTPDaGILFTRVTGDTVAVVNVKDVPGVKFNG--SGPTDSKGNTVVP 677
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 720 yVRPYHSNSISLNTVDASDTSAAIDNiAKTVVPTKGAVVrvkyntWIGQKAMMTLTY-------NGKPVPFGAVVTQTSG 792
Cdd:PRK15213 678 -LSSYDLNTVTVNAENLPLNTELTTT-SQNVVPTDKAVV------YREFKALKVLRYilrvkqkDGRFVPGGSWARNEQG 749
|
.
gi 556412326 793 E 793
Cdd:PRK15213 750 T 750
|
|
| PRK15273 |
PRK15273 |
fimbrial biogenesis outer membrane usher protein; |
21-831 |
8.13e-82 |
|
fimbrial biogenesis outer membrane usher protein;
Pssm-ID: 185176 [Multi-domain] Cd Length: 881 Bit Score: 281.66 E-value: 8.13e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 21 SSFSARAQE-HFNPHLLETDSAEvpAMDLSLFA-KDEVPPGDYNVDIFINGNLVDSKtlsFRRLKSAPTSDRTGA--CLN 96
Cdd:PRK15273 6 SPYSASGKDiEFNTDFLDVKNRD--NVNIAQFSrKGFILPGVYLLQIKINGQTLPQE---FPVNWVIPEHDPQGSevCAE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 97 ---VTQLKAWNVRVDNYFGEQEKASECVDLFTIPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITAGLLNY 173
Cdd:PRK15273 81 pelVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 174 SVSGQQDLHQRNGTDSSNQFLSLQPGLNVGAWRFRN--YSTYTHSESENDWDSVYT------YASRDIKSLKSQLVLGQG 245
Cdd:PRK15273 161 NINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRAdwQASYDHRDDDENTSTLHDqswsryYAYRALPTLGAKLTLGES 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 246 TTRGGIFDSVGFTGVQMYSDNDMKPDSMQGFAPVIRGIARSNAEVTVYQNGHSIYKATVPPGPFEFSDMYPTgSSGDLQV 325
Cdd:PRK15273 241 YLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQS-VSGTLHV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 326 VIKESDGTQSSFIVPYATLPVLQREGQVQYGLVAGK----THQDGSGSraedfnFIQGSAAWGVGKGITLYGGYIqAEDN 401
Cdd:PRK15273 320 TVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRpqdwDHHPITGT------FASAEASWGVTNGWSLYGGAI-GESN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 402 YSNLIAGTGFNMGSAGALSFDISQSWADIPQPDNMrQQEHHSGQSYRVRYSKTLQQTNTDIAVAGYKFSTRGYLSFQDFL 481
Cdd:PRK15273 393 YQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGF-DGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYL 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 482 NdwDPGNSTIDNGRERNRFDVTISQTLPFGTLS--LSMYDASYWNSEHADSMNLGFS-----STLGPVSYSLNyAHSKNV 554
Cdd:PRK15273 472 D--AKTYHHLNAGHEKERYTVTYNQNFREQGMSayFSYSRSTFWDSPDQSNYNLSLSwyfdlGSIKNLSASLN-GYRSEY 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 555 NGGYNNDSDnydddnvfsLNLSVPFsafshseAARSVSANYSMNSSKNgdtTHNIGISGTAmqENQLNWQVSEGYNADSE 634
Cdd:PRK15273 549 NGDKDDGVY---------ISLSVPW-------GNDSISYNGTFNGSQH---RNQLGYSGHS--QNGDNWQLHVGQDEQGA 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 635 ATNGNVTVGYQSTYADMSAGYSYDDYsRRVNYSLRGGMVLHRDGITLARQ--LNDSVALVETPGVSGMPINGQTN-VHTD 711
Cdd:PRK15273 608 QADGYYSHQGALTDIDLSADYEEGSY-RSLGMSLRGGMTLTTQGGALHRGslAGSTRLLVDTDGIADVPVSGNGSpTSTN 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 712 YFGNAIVPYVRPYHSNSISLNTVDASDTSAAIDNIAKTVVpTKGAVVRVKYNTWIGQKAMMTLTY-NGKPVPFGAVVTQT 790
Cdd:PRK15273 687 IFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITL-TEGAIGYRHFDVVSGEKMMAVFRLaDGDFPPFGAEVKNE 765
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 556412326 791 SGEsddtRSSIVGDGGEVYLVGLAGKGRLIVKWGETAnkQC 831
Cdd:PRK15273 766 RQQ----QLGLVADDGNAWLAGVKAGETLKVFWDGAA--QC 800
|
|
| PRK15304 |
PRK15304 |
putative fimbrial outer membrane usher protein; Provisional |
58-853 |
6.87e-58 |
|
putative fimbrial outer membrane usher protein; Provisional
Pssm-ID: 237937 [Multi-domain] Cd Length: 801 Bit Score: 212.69 E-value: 6.87e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 58 PGDYNVDIFINGN---------------LVDSKTLSFRRLKSAPTSDRTGaCLNVTQlkAWNVRVDNyfgeqekasecvd 122
Cdd:PRK15304 59 PGSHSVMVKINGKkrgslaarfdeegqlCVDDDFLQAAGLVPLPISAKET-CHDLQE--DYPSATIT------------- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 123 lfTIPGADEkidlaqqrFDLILPQVALFNTArgyVSPERWDEGITAGLLNYSVSGQqdlHQRNGTDSSNQF-LSLQPGLN 201
Cdd:PRK15304 123 --PLPNQES--------LELVVPPEALDNDL---LRLNNVIHGGTAALLNYSLFSS---RYEYSGGDSDYSqASLEAGFN 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 202 VGAWRFRNYSTYTHSESENDWDSVYTYASRDIKSLKSQLVLGQGTTRGGIFDSVGFTGVQMYSDNDMKPDSmQGFApvIR 281
Cdd:PRK15304 187 FADWTLRSRQFLTDTDGEFSTDSLYTYAQHTFTDQKTLMQVGQINVNNSLFSGASIYGVQLMPENALQQDG-SGVT--VT 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 282 GIARSN-AEVTVYQNGHSIYKATVPPGPFEFSDMYPTGSSGDLQVVIKESDGTQSSFIVPYATLPvLQREGQVQ-YGLVA 359
Cdd:PRK15304 264 GIARTSqARVEIRQSGQLIYSTLVPAGAFTLDDVPVINGNTDLNVTVVETDGSTSHFTVPASSFN-LNELSRPQgLTMAI 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 360 GKThqDGSGSRAEDFNFIQGSAAWGVGKGITLYGGYIQAEDNYsnliagtgfnmGSAGALSFDISQSWADIPQPDNMRQQ 439
Cdd:PRK15304 343 GRV--RDTDSDYSQPWVYNASDGWRLTPWMNLLAGGVLAENYQ-----------AAGARLDWVPLPKWTVSASMLGSQDS 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 440 --EHHSGQSYRVRYSKTLQQtNTDIAVAGYKFStRGYLSFQDFLNDwdpgnstiDNGRERNRFDVTISQTLPF-GTLSLS 516
Cdd:PRK15304 410 fgDSLQGHKTELDAGYSLPG-SLGLSVSTARYS-DGYRELTEALDD--------DYYSYKSSYSANVNWSHSLlGTFSLG 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 517 MYDASYWNSEHaDS--MNLGFSSTLGPVSYSLNYAHSKNvnggynNDSDNYDDDNVFSLNLSVPFSafshseAARSVSAN 594
Cdd:PRK15304 480 YYYNQATDGDN-DSryINASWGKTFKYASVSVNWQHAVS------QDDENSNDDDMFYVNISIPLG------RSRSINAY 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 595 YsmnsSKNGDTTHN-IGISGTAMQENQLNWQVSEGYNADSEATNGNVTVGYQSTYADMSAGYSYDDYsRRVNYSLRGGMV 673
Cdd:PRK15304 547 M----RNQGDKTSYgLRNMGSLSDNTSYYVSADRDHDESENSFNGSLNSNLHYTQLSVGAGTDGDDN-RNYNATLSGGIA 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 674 LHRDGITLA-RQLNDSVALVE-TPGVSGMPING-QTNVHTDYFGNAIVPYVRPYHSNSISLNTvDASDTSAAIDNIAKTV 750
Cdd:PRK15304 622 AHDQGVTFSpYTIKDTFAIARlDEPVAGVEIATpQGPVWTDFWGQAVIPGLTEWRKSRVEVNT-NTLPKNMDLANGTKMI 700
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 751 VPTKGAVVRVKYNTWIGQKAMMTLTY-NGKPVPFGAVVTQTSGESDDTrssiVGDGGEVYLVGLAGKGRLIVKwGETANK 829
Cdd:PRK15304 701 KAAHGAVSKVDFSVLNQRRVMLNVKRaDGSPLPKGVSIVDEKGNYLTS----AVDDGRVFLNDIDDIPALYAK-DDDMNR 775
|
810 820
....*....|....*....|....*
gi 556412326 830 QCAVDYTLAGAK-TEADILFINGVC 853
Cdd:PRK15304 776 LCRIHYTLPEDQdKEAFYETAKGVC 800
|
|
| PapC_N |
pfam13954 |
PapC N-terminal domain; The PapC N-terminal domain is a structural domain found at the ... |
30-177 |
8.13e-45 |
|
PapC N-terminal domain; The PapC N-terminal domain is a structural domain found at the N-terminus of the E. coli PapC protein. Pili are assembled using the chaperone usher system. In E.coli this is composed of the chaperone PapD and the usher PapC. This domain represents the N-terminal domain from PapC and its homologs. This domain is involved in substrate binding.
Pssm-ID: 433603 [Multi-domain] Cd Length: 146 Bit Score: 158.16 E-value: 8.13e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556412326 30 HFNPHLLETDSAEVpaMDLSLFAK-DEVPPGDYNVDIFINGNLVDSKTLSFRRLKSaptSDRTGACLNVTQLKAWNVRVD 108
Cdd:pfam13954 1 EFNPDFLDGSGAAG--VDLSRFSRgNYVLPGTYRVDVYVNGRWIGRQDVRFVADPG---DGGLEPCLTPELLEQLGVKTD 75
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556412326 109 NYFGEQEKASE-CVDLFT-IPGADEKIDLAQQRFDLILPQVALFNTARGYVSPERWDEGITAGLLNYSVSG 177
Cdd:pfam13954 76 KLPALADAQLGaCVDLAAlIPGASARFDFAQQRLDLSIPQAYLRRSARGYVPPSLWDDGIPAALLNYNANA 146
|
|
| PapC_C |
pfam13953 |
PapC C-terminal domain; The PapC C-terminal domain is a structural domain found at the ... |
771-837 |
1.04e-21 |
|
PapC C-terminal domain; The PapC C-terminal domain is a structural domain found at the C-terminus of the E. coli PapC protein. Pili are assembled using the chaperone usher system. In E.coli this is composed of the chaperone PapD and the usher PapC. This domain represents the C-terminal domain from PapC and its homologs. This domain has a beta-sandwich structure similar to the plug domain of PapC.
Pssm-ID: 464055 [Multi-domain] Cd Length: 66 Bit Score: 89.20 E-value: 1.04e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 556412326 771 MMTLTY-NGKPVPFGAVVTqtsgESDDTRSSIVGDGGEVYLVGLAGKGRLIVKWGETANKQCAVDYTL 837
Cdd:pfam13953 1 LLTLTDaDGKPLPFGATVT----DEGGGQSGIVGQDGQVYLRGLPDQGRLRVKWGDGAGQQCRASYTL 64
|
|
| |
