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Conserved domains on  [gi|556281272|ref|WP_023289347|]
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MULTISPECIES: ABC transporter permease [Klebsiella]

Protein Classification

ABC transporter permease( domain architecture ID 11467922)

ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter, which may be involved in the transport of one or more from a variety of substrates such as nopaline and octopine

Gene Ontology:  GO:0140359|GO:0042626|GO:0043190|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ArtM COG4160
ABC-type arginine/histidine transport system, permease component [Amino acid transport and ...
 3-231 5.44e-109

ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism];


:

Pssm-ID: 443325 [Multi-domain]  Cd Length: 229  Bit Score: 313.18  E-value: 5.44e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   3 IDFAFLGETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFG 82
Cdd:COG4160    1 MDLDLLFEYLPLLLSGLPLTLQLLALSLLLGFLLAVPLALARASGNRLLRWPARGYIYVFRGTPLLVQLFLIYYGLGQFE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  83 VIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEA 162
Cdd:COG4160   81 WVRESWLWPLLRDPWFCALLALTLNTAAYTAEIFRGAIRAVPKGEIEAARALGMSRWQTFRRIILPSALRRALPAYSNEV 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556281272 163 ILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQNP 231
Cdd:COG4160  161 ILMLKATALASTITVMDLTGVARRIYSRTYDPFEPFLIAALIYLVITFLLTRLFRLLERRLLRHLRPRR 229
 
Name Accession Description Interval E-value
ArtM COG4160
ABC-type arginine/histidine transport system, permease component [Amino acid transport and ...
 3-231 5.44e-109

ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 443325 [Multi-domain]  Cd Length: 229  Bit Score: 313.18  E-value: 5.44e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   3 IDFAFLGETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFG 82
Cdd:COG4160    1 MDLDLLFEYLPLLLSGLPLTLQLLALSLLLGFLLAVPLALARASGNRLLRWPARGYIYVFRGTPLLVQLFLIYYGLGQFE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  83 VIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEA 162
Cdd:COG4160   81 WVRESWLWPLLRDPWFCALLALTLNTAAYTAEIFRGAIRAVPKGEIEAARALGMSRWQTFRRIILPSALRRALPAYSNEV 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556281272 163 ILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQNP 231
Cdd:COG4160  161 ILMLKATALASTITVMDLTGVARRIYSRTYDPFEPFLIAALIYLVITFLLTRLFRLLERRLLRHLRPRR 229
artM PRK11122
arginine ABC transporter permease ArtM;
10-222 2.81e-56

arginine ABC transporter permease ArtM;


Pssm-ID: 182978 [Multi-domain]  Cd Length: 222  Bit Score: 179.00  E-value: 2.81e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  10 ETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGVIR-HSF 88
Cdd:PRK11122   3 EYLPELLKGLHTSLTLTVASLLVALVLALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFPWLQeYPW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  89 LWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLrRIIAPVMLRYALPAYSTEAILLVKS 168
Cdd:PRK11122  83 LWHLLSQPWLCAMLALALNSAAYSTQLFYGAVRAIPEGQWQSCAALGMSKKQTL-RILLPYAFKRALSSYSNEVVLVFKS 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 556281272 169 TALASLVTVWDVTGVAQQIIQRTYRTMeVFLCAAAIYLLLNFIIVQLYALLERR 222
Cdd:PRK11122 162 TSLAYTITLMDVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLLMRLIERK 214
ectoine_ehuC TIGR03004
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are ...
 21-229 6.73e-29

ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons. Permease subunits EhuC and EhuD are homologous.


Pssm-ID: 132049 [Multi-domain]  Cd Length: 214  Bit Score: 108.40  E-value: 6.73e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   21 VTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGvirhsflwpLLREPFICA 100
Cdd:TIGR03004  13 VTMQITLAGSVLATVLAFFAGLGRVSGGPILRTVALCYIEVFRGTSLLVQLFWFYFVLPLIG---------LSLDPVTTG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  101 VLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDV 180
Cdd:TIGR03004  84 VMVLGLHAGAYGAEIVRGALSSVSVQQLEACRALNFTRFQTLRRISLPQALVEMMPAFGNLAIELLKLTSLVSLISLADL 163

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 556281272  181 TGVAQQIIQRTYRTMEVFlcaaAIYLLLNFIIVQLYALLERRLTPHTRQ 229
Cdd:TIGR03004 164 TFAAQSIRNLTLDTLSIF----AITLLCYFVMALIIMLIMRVLERVVRR 208
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 19-213 1.07e-16

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 75.39  E-value: 1.07e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  19 LPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFgvirhsFLWPLLREPFI 98
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVL------LGWGILPGLGL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  99 CAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVW 178
Cdd:cd06261   75 PALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGG 154

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 556281272 179 DVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIV 213
Cdd:cd06261  155 EAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLS 189
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 36-223 6.81e-11

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 59.23  E-value: 6.81e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   36 LALGVLALRMSRWPLaSGFAKGYILIFRGSPLLIQLFLIYYgLGQFGVIRHSFLWpllrepficAVLALALCTAAYTAEI 115
Cdd:pfam00528   2 IPLGIIAALRRGRRL-DRLLRPLIDLLQALPSFVLAILLVV-IAILSILGHGILP---------AIILALLGWAGYARLI 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  116 LRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRT- 194
Cdd:pfam00528  71 RRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYp 150

                         170       180       190
                  ....*....|....*....|....*....|.
gi 556281272  195 --MEVFLCAAAIYLLLNFIIVQLYALLERRL 223
Cdd:pfam00528 151 eiQGPVLAAALILLLLNLLVDILQRLLDPRV 181
 
Name Accession Description Interval E-value
ArtM COG4160
ABC-type arginine/histidine transport system, permease component [Amino acid transport and ...
 3-231 5.44e-109

ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 443325 [Multi-domain]  Cd Length: 229  Bit Score: 313.18  E-value: 5.44e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   3 IDFAFLGETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFG 82
Cdd:COG4160    1 MDLDLLFEYLPLLLSGLPLTLQLLALSLLLGFLLAVPLALARASGNRLLRWPARGYIYVFRGTPLLVQLFLIYYGLGQFE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  83 VIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEA 162
Cdd:COG4160   81 WVRESWLWPLLRDPWFCALLALTLNTAAYTAEIFRGAIRAVPKGEIEAARALGMSRWQTFRRIILPSALRRALPAYSNEV 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556281272 163 ILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQNP 231
Cdd:COG4160  161 ILMLKATALASTITVMDLTGVARRIYSRTYDPFEPFLIAALIYLVITFLLTRLFRLLERRLLRHLRPRR 229
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 1-223 1.45e-68

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 210.32  E-value: 1.45e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   1 MIIDFAFLGETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQ 80
Cdd:COG0765    1 MFFDFSVLLDYLPLLLEGLLVTLLLTVLAIVLGLVLGLLLALARLSPNPVLRWLATAYVEFFRGTPLLVQLFFIYFGLPL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  81 FGvIRHSflwpllrePFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYST 160
Cdd:COG0765   81 LG-IDLS--------PFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLGN 151

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 556281272 161 EAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRL 223
Cdd:COG0765  152 EFISLLKDTSLVSVIGVPELTRAAQQIASRTFRPFEVYLVAALIYLVLTLPLSLLARRLERRL 214
artM PRK11122
arginine ABC transporter permease ArtM;
10-222 2.81e-56

arginine ABC transporter permease ArtM;


Pssm-ID: 182978 [Multi-domain]  Cd Length: 222  Bit Score: 179.00  E-value: 2.81e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  10 ETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGVIR-HSF 88
Cdd:PRK11122   3 EYLPELLKGLHTSLTLTVASLLVALVLALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFPWLQeYPW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  89 LWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLrRIIAPVMLRYALPAYSTEAILLVKS 168
Cdd:PRK11122  83 LWHLLSQPWLCAMLALALNSAAYSTQLFYGAVRAIPEGQWQSCAALGMSKKQTL-RILLPYAFKRALSSYSNEVVLVFKS 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 556281272 169 TALASLVTVWDVTGVAQQIIQRTYRTMeVFLCAAAIYLLLNFIIVQLYALLERR 222
Cdd:PRK11122 162 TSLAYTITLMDVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLLMRLIERK 214
PRK15069 PRK15069
histidine ABC transporter permease HisM;
19-228 5.28e-53

histidine ABC transporter permease HisM;


Pssm-ID: 185029 [Multi-domain]  Cd Length: 234  Bit Score: 171.00  E-value: 5.28e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  19 LPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGVIR-HSFLWPLLREPF 97
Cdd:PRK15069  23 LAITLWLLVASVVIGFVLAVPLAIARVSSNKWIRFPVWLYTYVFRGTPLYVQLLVFYTGMYSLEIVRgTDLLDAFFRSGL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  98 ICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTV 177
Cdd:PRK15069 103 NCTILAFTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGMSTFKLYRRIILPSALRRALPAYSNEVILMLHATTLAFTATV 182

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 556281272 178 WDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTR 228
Cdd:PRK15069 183 PDILKIARDINSATYQPFQAFGIAAVLYLIISFVLISLFRRAERRWLAHLK 233
ArtQ COG4215
ABC-type arginine transport system, permease component [Amino acid transport and metabolism];
21-232 1.95e-51

ABC-type arginine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 443361 [Multi-domain]  Cd Length: 238  Bit Score: 167.22  E-value: 1.95e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  21 VTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQ-FGVIRHSFLWPLLRE--PF 97
Cdd:COG4215   24 VTLELALLSLLLGLVLGLLGALAKLSGNRPLRWLATGYTTVVRGVPDLLLILLLYFGGQIlLNALADLFGYDGFIEinPF 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  98 ICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTV 177
Cdd:COG4215  104 VAGVLALGFVFGAYATEVFRGAFLAVPKGQIEAARAYGMSRWQVFRRILLPQMWRYALPGLGNNWLVLLKDTALVSVIGL 183

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 556281272 178 WDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQNPA 232
Cdd:COG4215  184 VDLVRQAQEAAGSTREPFTFYLAAALIYLALTTVSELVLARLERRASRGVRRAAG 238
PRK15100 PRK15100
cystine ABC transporter permease;
22-229 5.41e-41

cystine ABC transporter permease;


Pssm-ID: 185055 [Multi-domain]  Cd Length: 220  Bit Score: 139.88  E-value: 5.41e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  22 TLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGVirhsflwplLREPFICAV 101
Cdd:PRK15100  22 TLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYVSIFRGTPLIAQLFMIYYGLPQFGI---------ELDPIPAAM 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272 102 LALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVT 181
Cdd:PRK15100  93 IGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTRWQTLRRAILPQAARTALPPLSNSFISLVKDTSLAATIQVPELF 172

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 556281272 182 GVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQ 229
Cdd:PRK15100 173 RQAQLITSRTLEVFTMYLAASLIYWIMATVLSALQNRFENQLNRQERE 220
PRK11123 PRK11123
arginine ABC transporter permease ArtQ;
12-224 9.99e-39

arginine ABC transporter permease ArtQ;


Pssm-ID: 182979 [Multi-domain]  Cd Length: 238  Bit Score: 134.42  E-value: 9.99e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  12 LLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQ--------FGV 83
Cdd:PRK11123   4 FFPLASAAGMTVGLAVCALIVGLALAMLFAVWESAKWRPVAWPGTALVTLLRGLPEILVVLFIYFGSSQllltlsdgFTL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  84 IRHSFLWPLLRE-------PFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALP 156
Cdd:PRK11123  84 NLGFVQIPVQMDienfevsPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALP 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 556281272 157 AYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224
Cdd:PRK11123 164 GLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIELRAT 231
ectoine_ehuC TIGR03004
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are ...
 21-229 6.73e-29

ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons. Permease subunits EhuC and EhuD are homologous.


Pssm-ID: 132049 [Multi-domain]  Cd Length: 214  Bit Score: 108.40  E-value: 6.73e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   21 VTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGvirhsflwpLLREPFICA 100
Cdd:TIGR03004  13 VTMQITLAGSVLATVLAFFAGLGRVSGGPILRTVALCYIEVFRGTSLLVQLFWFYFVLPLIG---------LSLDPVTTG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  101 VLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDV 180
Cdd:TIGR03004  84 VMVLGLHAGAYGAEIVRGALSSVSVQQLEACRALNFTRFQTLRRISLPQALVEMMPAFGNLAIELLKLTSLVSLISLADL 163

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 556281272  181 TGVAQQIIQRTYRTMEVFlcaaAIYLLLNFIIVQLYALLERRLTPHTRQ 229
Cdd:TIGR03004 164 TFAAQSIRNLTLDTLSIF----AITLLCYFVMALIIMLIMRVLERVVRR 208
glnP PRK09494
glutamine ABC transporter permease protein; Reviewed
 23-223 4.98e-28

glutamine ABC transporter permease protein; Reviewed


Pssm-ID: 181907 [Multi-domain]  Cd Length: 219  Bit Score: 106.29  E-value: 4.98e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  23 LGLFICSFLLGGVLALGVLA--LRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFgvirhsfLWPLLREPFICA 100
Cdd:PRK09494  21 MTLWISVLGLAGGLVIGLLAgfARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPMA-------FNDLRIDPFTAA 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272 101 VLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDV 180
Cdd:PRK09494  94 VVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRRMLPPLGNQWIISIKDTSLFIVIGVAEL 173

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 556281272 181 TGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRL 223
Cdd:PRK09494 174 TRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRM 216
ectoine_ehuD TIGR03003
ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Members of this family are ...
 4-223 7.51e-27

ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons.


Pssm-ID: 132048 [Multi-domain]  Cd Length: 212  Bit Score: 103.01  E-value: 7.51e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272    4 DFAFLGETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGV 83
Cdd:TIGR03003   2 DWEFVRQILPTLIEGLKITILATALGFAIAAVLGLVFAILRRSAPTPISWPTSFVVEFIRGTPLLVQLYFLYYVLPDIGI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   84 IRHSFLwpllrepfiCAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAI 163
Cdd:TIGR03003  82 RLPALV---------AGVLGLGLHYATYAAEVYRAGIEAVPRGQWEAATALNLTARQTYRHIILPQAIPPIIPALGNYLV 152

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  164 LLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRL 223
Cdd:TIGR03003 153 AMFKETPVLSAITVLELMNQAKSIGNSTFRYLEPMTLVGVFFLILSIISVFFLRRLEARL 212
PRK15135 PRK15135
histidine ABC transporter permease HisQ;
21-224 3.10e-23

histidine ABC transporter permease HisQ;


Pssm-ID: 185089 [Multi-domain]  Cd Length: 228  Bit Score: 93.70  E-value: 3.10e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  21 VTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQF--GVIRHSFLWPLLREPFI 98
Cdd:PRK15135  15 VTLELALSSVVLAVIIGLIGAGGKLSQNRLLGLIFEGYTTLIRGVPDLVLMLLIFYGLQIAlnSVTEALGVGQIDIDPMV 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  99 CAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVW 178
Cdd:PRK15135  95 AGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLE 174

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 556281272 179 DVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224
Cdd:PRK15135 175 DVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLWLERRYS 220
HEQRo_perm_3TM TIGR01726
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This ...
 15-118 2.61e-18

amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This model represents one of several classes of multiple membrane spanning regions found immediately N-terminal to the domain described by pfam00528, binding-protein-dependent transport systems inner membrane component. The region covered by this model generally is predicted to contain three transmembrane helices. Substrate specificities attributed to members of this family include histidine, arginine, glutamine, glutamate, and (in Agrobacterium) the opines octopine and nopaline. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 130787 [Multi-domain]  Cd Length: 99  Bit Score: 77.19  E-value: 2.61e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   15 LGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFGvirhsflwpLLR 94
Cdd:TIGR01726   5 LLKGLLLTLLLSVLSILLGLVLGLLLALLRLSGNRPLRWIATVYVELFRGTPLLVQLFFIYFGLPLIG---------IRL 75

                          90       100
                  ....*....|....*....|....
gi 556281272   95 EPFICAVLALALCTAAYTAEILRG 118
Cdd:TIGR01726  76 SPLTAAVIALTLFYGAYLAEIFRG 99
PRK15107 PRK15107
glutamate/aspartate ABC transporter permease GltK;
4-224 8.55e-17

glutamate/aspartate ABC transporter permease GltK;


Pssm-ID: 185062 [Multi-domain]  Cd Length: 224  Bit Score: 76.41  E-value: 8.55e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   4 DFAFLGETLLKLGAALPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFgV 83
Cdd:PRK15107   5 DWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTILAVMRLSSFKPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGF-L 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  84 IRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAI 163
Cdd:PRK15107  84 QNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGI 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556281272 164 LLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224
Cdd:PRK15107 164 VLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKKRTV 224
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 19-213 1.07e-16

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 75.39  E-value: 1.07e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  19 LPVTLGLFICSFLLGGVLALGVLALRMSRWPLASGFAKGYILIFRGSPLLIQLFLIYYGLGQFgvirhsFLWPLLREPFI 98
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVL------LGWGILPGLGL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  99 CAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVW 178
Cdd:cd06261   75 PALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGG 154

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 556281272 179 DVTGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIV 213
Cdd:cd06261  155 EAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLS 189
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 36-223 6.81e-11

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 59.23  E-value: 6.81e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   36 LALGVLALRMSRWPLaSGFAKGYILIFRGSPLLIQLFLIYYgLGQFGVIRHSFLWpllrepficAVLALALCTAAYTAEI 115
Cdd:pfam00528   2 IPLGIIAALRRGRRL-DRLLRPLIDLLQALPSFVLAILLVV-IAILSILGHGILP---------AIILALLGWAGYARLI 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  116 LRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRT- 194
Cdd:pfam00528  71 RRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYp 150

                         170       180       190
                  ....*....|....*....|....*....|.
gi 556281272  195 --MEVFLCAAAIYLLLNFIIVQLYALLERRL 223
Cdd:pfam00528 151 eiQGPVLAAALILLLLNLLVDILQRLLDPRV 181
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 15-225 3.86e-06

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 46.68  E-value: 3.86e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  15 LGAALPVTLGLFICSFLLGGVLALgVLALRMSRWPLASGFAKGYILIFRGSPL--LIQLFLIYYGLGQFGvirhsflwpl 92
Cdd:COG0600   59 LWEHLLASLLRVLLGFALAALLGV-PLGLLLGLSRLLRRLLDPLLVFLRPIPPlaLAPLLILWFGIGEAS---------- 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  93 lrepficAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALA 172
Cdd:COG0600  128 -------KIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAWIGLVVA 200

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 556281272 173 SLVTVwdVTGVAQQIIQ-RTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTP 225
Cdd:COG0600  201 ELLGA--SSGLGYLILDaRQLLDTDLVFAAILVIGLLGLLLDLLLRLLERRLLR 252
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
100-210 2.03e-04

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 42.07  E-value: 2.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272 100 AVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRIIAPvMLRYALPAysteAILLVKSTALASLVTVwd 179
Cdd:COG1178  142 IILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLP-LLRPAIAA----GALLVFLLCLADFGTP-- 214

                         90       100       110
                 ....*....|....*....|....*....|.
gi 556281272 180 vtgvaqQIIQRTYRTMEVflcaaAIYLLLNF 210
Cdd:COG1178  215 ------LVLGGGYTTLTT-----AIYQAWLG 234
PhnE COG3639
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ...
 4-155 2.96e-04

ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 442856 [Multi-domain]  Cd Length: 244  Bit Score: 40.83  E-value: 2.96e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272   4 DFAFLGETLLKLGaalpVTLGLFICSFLLGGVLA--LGVLALR-MSRWPLASGFAKGYILIFRGSPLLI--QLFLIYYGL 78
Cdd:COG3639   42 DWSYLPDLLSALL----ETLAIALLGTLLGAVLAlpLAFLAARnLAPNPWVRLLARRLLNVLRAIPELVwaLIFVAAVGL 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  79 GQFGvirhsflwpllrepficAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLRRII----APVMLRYA 154
Cdd:COG3639  118 GPFA-----------------GVLALAIHTIGFLGKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVlpqvLPQFLSYT 180


                 .
gi 556281272 155 L 155
Cdd:COG3639  181 L 181
PhnE TIGR01097
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ...
 4-143 2.08e-03

phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]


Pssm-ID: 273441 [Multi-domain]  Cd Length: 250  Bit Score: 38.29  E-value: 2.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272    4 DFAFLGETLLKLGaalpVTLGLFICSFLLGGVLA--LGVLALR-MSRWPLASGFAKGYILIFRGSPLLI--QLFLIYYGL 78
Cdd:TIGR01097  49 DWSYLPRILKALL----ETLAMAILGTVLAAVLAvpLALLAARnITPSPWLYGLARLLLNFLRAIPELVwaLIFVAAVGL 124

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 556281272   79 GQFGvirhsflwpllrepficAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQACGMSRWLLLR 143
Cdd:TIGR01097 125 GPFA-----------------GVLALAFHTVGFLGKLFAEAIEEVDPGPVEALRATGASKLQVIR 172
DppB COG0601
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 15-223 9.61e-03

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440366 [Multi-domain]  Cd Length: 314  Bit Score: 36.58  E-value: 9.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  15 LGAALPVTLGLFICSFLLGGVLA--LGVL-ALRMSRWP--LASGFAkgyiLIFRGSP------LLIQLFliYYGLGQFGV 83
Cdd:COG0601   91 IAERLPVTLELALLALLLALLIGipLGILaALRRGSWLdrLITVLA----LLGISIPsfwlglLLILLF--AVKLGWLPV 164

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556281272  84 IRHSFLWPLLREPF---ICAVLALALCTAAYTAEILRGGLLAIpPGQ--IEAGQACGMSRWLLLRRIIapvmLRYALPay 158
Cdd:COG0601  165 SGRVSPWEDFLDALrhlILPALTLALGSLAGIARLTRSSMLEV-LGQdyVRTARAKGLSERRVLLRHA----LRNALI-- 237

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556281272 159 steAILLVKSTALASLV-------TVWDVTGVAQQIIQRTYR-----TMEVFLCAAAIYLLLNFIIVQLYALLERRL 223
Cdd:COG0601  238 ---PVVTVLGLQLGGLLggavvveTVFSWPGLGRLLVDAILNrdypvVQGIVLLIAVLVVLVNLLVDLLYALLDPRI 311
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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