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Conserved domains on  [gi|550715262|ref|WP_022648151|]
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MULTISPECIES: molecular chaperone [Enterobacter]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-218 3.13e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 234.50  E-value: 3.13e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKL--TAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIENIDSKN---KTAPPFIVTP 75
Cdd:COG3121    1 MKRLlrLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTN-TGDTPYLVQSWVDDWDQDAgpdKATAPFVVTP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  76 TLFRLDAEQKNSLRINYLGTPLPTDRESVFWLNIKNIAPSK--KANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKF 153
Cdd:COG3121   80 PLFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDasEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550715262 154 TCRNNTLSAHNPSPWFVSFYKVSVGNTDVEM---PGMIDPFSARQWHIP------CSGTIRWQAINDYGGLTRV 218
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLkkgLGMVLPGSTRRWPLPagaslaAGGKVTWATINDYGGAVPL 233
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-218 3.13e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 234.50  E-value: 3.13e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKL--TAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIENIDSKN---KTAPPFIVTP 75
Cdd:COG3121    1 MKRLlrLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTN-TGDTPYLVQSWVDDWDQDAgpdKATAPFVVTP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  76 TLFRLDAEQKNSLRINYLGTPLPTDRESVFWLNIKNIAPSK--KANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKF 153
Cdd:COG3121   80 PLFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDasEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550715262 154 TCRNNTLSAHNPSPWFVSFYKVSVGNTDVEM---PGMIDPFSARQWHIP------CSGTIRWQAINDYGGLTRV 218
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLkkgLGMVLPGSTRRWPLPagaslaAGGKVTWATINDYGGAVPL 233
lfpB PRK15290
fimbrial chaperone;
2-216 2.59e-54

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 174.02  E-value: 2.59e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   2 KKLTAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENIDSKNKTAPPFIVTPTLFRLD 81
Cdd:PRK15290  18 KLFTAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  82 AEQKNSLR-INYLGTPLPTDRESVFWLNIKNIAPS-KKANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNT 159
Cdd:PRK15290  98 PSQEKVLRiIHTKGVSLPDDRESVFWLNIKNIPPSaSNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRN 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262 160 LSAHNPSPWFVSFYKVSVGNTDVEMpGMIDPFSARQWHIPCS---GTIRWQAINDYGGLT 216
Cdd:PRK15290 178 LIAENPNPIHISVMDVIVDGHDVPL-NMIRPFETLTLPLPANsagGQMTWRFINDYGAVS 236
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 23-141 4.43e-47

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 151.59  E-value: 4.43e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   23 VVMGGTRVVYLEGQREVAFSITNMEKeTPYLIQSWIENID---SKNKTAPPFIVTPTLFRLDAEQKNSLRINYLGTPLPT 99
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGD-NPYLVQSWVDDGNeegTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 550715262  100 DRESVFWLNIKNI--APSKKANSNKLQINVKSKFKLFFRPAGLK 141
Cdd:pfam00345  80 DRESLFWLNVLEIppKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-218 3.13e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 234.50  E-value: 3.13e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKL--TAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIENIDSKN---KTAPPFIVTP 75
Cdd:COG3121    1 MKRLlrLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTN-TGDTPYLVQSWVDDWDQDAgpdKATAPFVVTP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  76 TLFRLDAEQKNSLRINYLGTPLPTDRESVFWLNIKNIAPSK--KANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKF 153
Cdd:COG3121   80 PLFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDasEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550715262 154 TCRNNTLSAHNPSPWFVSFYKVSVGNTDVEM---PGMIDPFSARQWHIP------CSGTIRWQAINDYGGLTRV 218
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLkkgLGMVLPGSTRRWPLPagaslaAGGKVTWATINDYGGAVPL 233
lfpB PRK15290
fimbrial chaperone;
2-216 2.59e-54

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 174.02  E-value: 2.59e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   2 KKLTAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENIDSKNKTAPPFIVTPTLFRLD 81
Cdd:PRK15290  18 KLFTAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  82 AEQKNSLR-INYLGTPLPTDRESVFWLNIKNIAPS-KKANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNT 159
Cdd:PRK15290  98 PSQEKVLRiIHTKGVSLPDDRESVFWLNIKNIPPSaSNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRN 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262 160 LSAHNPSPWFVSFYKVSVGNTDVEMpGMIDPFSARQWHIPCS---GTIRWQAINDYGGLT 216
Cdd:PRK15290 178 LIAENPNPIHISVMDVIVDGHDVPL-NMIRPFETLTLPLPANsagGQMTWRFINDYGAVS 236
PRK15195 PRK15195
molecular chaperone FimC;
8-222 2.30e-53

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 171.20  E-value: 2.30e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   8 LFFYSLGMSLSAHA--GVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENIDS-KNKTappFIVTPTLFRLDAEQ 84
Cdd:PRK15195  10 IIIFYLIISASVHAagGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGvKEKS---FIVTPPLFVSEPKS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  85 KNSLRINYLGTPLPTDRESVFWLNIKNIAPSKKAN---SNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNTLS 161
Cdd:PRK15195  87 ENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNAlegRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLK 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 550715262 162 AHNPSPWFVSFYKVSVGNTDVEmPGMIDPFSARQWHIPC--SGTIRWQAINDYGGLTRVATQS 222
Cdd:PRK15195 167 VHNPSPYYVTLVNLQVGSQKLG-NAMIAPKVNSQIPLPSgvQGKLKFQTVNDYGAVTPAREVN 228
PRK15295 PRK15295
fimbrial assembly chaperone;
10-213 1.12e-51

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 166.66  E-value: 1.12e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  10 FYSLGMSLS---AHAGVVMGGTRVVYLEGQREVAFSITNMEKeTPYLIQSWIENIDSKNKTAPPFIVTPTLFRLDAEQKN 86
Cdd:PRK15295   5 KSVLVVLLTshvAHASIVVGGTRLVFDGNNDESSINVENKDS-KANLVQSWLSVVDPQVTNKQAFIITPPLFRLDAGQKN 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  87 SLRINYLGTPLPTDRESVFWLNIKNI-APSKKANSNKLQINVKSKFKLFFRPAGLKGNAELAY-KKLKFTCRNNTLSAHN 164
Cdd:PRK15295  84 SIRVIRSGAPLPADRESMYWLNIKGIpSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQsQQLKWQTAGDVITVNN 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 550715262 165 PSPWFVSFYKVSVGNTDVEMPGMIDPFSARQWHIPCS----GTIRWQAINDYG 213
Cdd:PRK15295 164 PTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTaaphGTVTWRLISDYG 216
PRK09926 PRK09926
fimbrial chaperone;
2-215 4.44e-51

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 165.66  E-value: 4.44e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   2 KKLTAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKEtPYLIQSWIEniDSKNKTAP-----PFIVTPT 76
Cdd:PRK09926   6 KHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNN-PLLVQSWLD--TGDDNAEPgsikvPFTATPP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  77 LFRLDAEQKNSLRINYLG-TPLPTDRESVFWLNIKNIAP----SKKANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKL 151
Cdd:PRK09926  83 VSRIDPKRGQTIKLMYTAsTALPKDRESVFWFNVLEVPPkpdaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLAL 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550715262 152 KFTCRNN----TLSAHNPSPWFVSF----YKVSVGNTDVEMPgMIDPFSARQWHI------PCSGTIRWQAINDYGGL 215
Cdd:PRK09926 163 KWSWAGSegkaSLRVTNPTPYYVSFssgdLEAGGKRYPVDSK-MIAPFSDESMKVkglsgkASSGKVHFYAINDFGGA 239
PRK15208 PRK15208
molecular chaperone LpfB;
1-221 1.37e-50

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 163.93  E-value: 1.37e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKLTAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENIDSKNKTapPFIVTPTLFRL 80
Cdd:PRK15208   1 MRLISFTALALALIAQNSFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKT--PFIITPPLFKL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  81 DAEQKNSLRINYLGTPLPTDRESVFWLNIKNIaPSKKA---NSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRN 157
Cdd:PRK15208  79 DPTKNNVLRIVNITNTLPQDRESVYWINVKAI-PAKSEdaeNKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAG 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 550715262 158 NTLSAHNPSPWFVSFYKVSVGNTDVEMPGMIDPFSARQWHIPcSGT-----IRWQAINDYGGLTRVATQ 221
Cdd:PRK15208 158 NQIKVENPSAFNLTFNQFYANGRDIEKAGMVPAKGSLNIELP-AGTgkvseVKYNIINDFGTAGEMLTK 225
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 16-214 5.41e-50

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 162.64  E-value: 5.41e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  16 SLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKeTPYLIQSWIENIDSKNKTA-PPFIVTPTLFRLDAEQKNSLRINYLG 94
Cdd:PRK15299  17 SLAHAAGINIGTTRVIFHGDAKDASISISNSDN-VPYLIQSWAQSISETGASGdAPFMVTPPLFRLNGGQKNVLRIIRTG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  95 TPLPTDRESVFWLNIKNIAPSKKANS-NKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNTLSAHNPSPWFVSFY 173
Cdd:PRK15299  96 GNLPEDRESLYWLDIKSIPSSNPDNKhNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTPYYMNFA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 550715262 174 KVSVGNTDVEMPGMIDPFSARQWHIP--CSGTIRWQAINDYGG 214
Cdd:PRK15299 176 TLSVGSQKVKAPRYVAPFGNAQYTLPaaASGPIAWSIINDFGG 218
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 23-141 4.43e-47

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 151.59  E-value: 4.43e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   23 VVMGGTRVVYLEGQREVAFSITNMEKeTPYLIQSWIENID---SKNKTAPPFIVTPTLFRLDAEQKNSLRINYLGTPLPT 99
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGD-NPYLVQSWVDDGNeegTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 550715262  100 DRESVFWLNIKNI--APSKKANSNKLQINVKSKFKLFFRPAGLK 141
Cdd:pfam00345  80 DRESLFWLNVLEIppKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
4-220 2.73e-42

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 142.92  E-value: 2.73e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   4 LTAALFFYSLGMSLsAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQS-------WIENIDSKNKTapPFIVTPT 76
Cdd:PRK15192   6 LRCAIYWCLLPISW-AQAGVVIGGTRFIYHAGAPALSVPVSN-HSEASWLIDThilpggrWPGTKNEGNIT--PFVVTPP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  77 LFRLDAEQKNSLRINYLGTPLPTDRESVFWLNIKNIaPSKKANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCR 156
Cdd:PRK15192  82 LFMLSARQENSMRVVYTGAPLPADRESLFTLSIAAI-PSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 550715262 157 NNTLSAHNPSPWFVSFYKVSVGNTDVEMPGMIDPFSARQ--W---HIPCsgTIRWQAINDYGGLTRVAT 220
Cdd:PRK15192 161 PDGATVRNPTPYYVTLFLLRANERAQDNAGVVAPFATRQtdWcrhTVRC--TVRWQSINDYGRVMTAQT 227
PRK15211 PRK15211
fimbrial chaperone;
1-214 1.04e-39

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 136.11  E-value: 1.04e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKLTAALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETpYLIQSWIENIDSKNKTAPpFIVTPTLFRL 80
Cdd:PRK15211   2 KMMKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQT-YGGQVWIDNTTQGSSTVY-MVPAPPFFKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  81 DAEQKNSLRINYLGTPLPTDRESVFWLNIKNIAPSKKA-NSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNT 159
Cdd:PRK15211  80 RPKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKAsEGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGE 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 550715262 160 LSAHNPSPWFVSFYKVSVGNTDVEMPGMID-------PFSARQWHIPCS-GTIRWQAINDYGG 214
Cdd:PRK15211 160 TYLKNPTPYYFAVTGVKLNGQPVKLSDRVMneiaqlaPFSEVSLGKLSLnGTVTVQAVNDWGG 222
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 8-222 5.87e-36

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 126.42  E-value: 5.87e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   8 LFFYSLGMSLSAHAG-VVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENIDSKNKTapPFIVTPTLFRLDAEQKN 86
Cdd:PRK15188  13 LLLSAAGLSFAAQAGgIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRST--DFIITPPLFVIQPKKEN 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  87 SLRINYLGTPLPTDRESVFWLNIKNIaPS---KKANSNKLQINVKSKFKLFFRPAGLkgnAEL-AYKKLKFTCRNN--TL 160
Cdd:PRK15188  91 ILRIMYVGPSLPTDRESVFYLNSKAI-PSvdkNKLTGNSLQIATQSVIKLFIRPKNL---AEApAHAPSTLRCRNErgQL 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550715262 161 SAHNPSPWFVSFykVSVGNTDVEMPGMIDPFSARQWHIPCSGTIRWQAINDYGGLT--RVATQS 222
Cdd:PRK15188 167 TITNPSPYYVSM--VELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTpaRVCPAS 228
PRK15249 PRK15249
fimbrial chaperone;
8-213 5.05e-35

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 124.53  E-value: 5.05e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   8 LFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIENID----SKNKTAPPFIVTPTLFRLDAE 83
Cdd:PRK15249  15 VFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKN-NDAIPYIVQTWFDDGDmntsPENSSAMPFIATPPVFRIQPK 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  84 QKNSLRINYLGT-PLPTDRESVFWLNIKNIAPS---KKANSNKLQINVKSKFKLFFRPAGLkGNAELAYKKLKFTCRNNT 159
Cdd:PRK15249  94 AGQVVRVIYNNTkKLPQDRESVFWFNVLQVPPTnigSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKTVNKG 172

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 550715262 160 -----LSAHNPSPWFVSFYKVS--VGNTDVEM-PGMIDPFSARQWHIP-------CSGTIRWQAINDYG 213
Cdd:PRK15249 173 sgksgIVIVNPQPWFASLSNLNvkVNGASYNLdADMIAPFSSQTWWLPgkrslksFSGTVTVTLVNDQG 241
PRK15224 PRK15224
pili assembly chaperone PapD;
23-214 1.26e-33

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 120.62  E-value: 1.26e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  23 VVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSwieNIDSKNKTAP-PFIVTPTLFRLDAEQKNSLRINYLGTPLPTDR 101
Cdd:PRK15224  30 VKLGATRVIYHAGTAGATLSVSN-PQNYPILVQS---SVKAADKSSPaPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDR 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262 102 ESVFWLNIKNIAPSKKANSNK-------LQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNTLSAHNPSPWFVSFYK 174
Cdd:PRK15224 106 ETLQWVCIKAVPPENEPSDTQakgatldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLAS 185

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 550715262 175 VSVGNTDVEMPGMIDPFSARQWHIPCS--GTIRWQAINDYGG 214
Cdd:PRK15224 186 VTVGGKPITGLEYIPPFADKTLNMPGSahGDIEWRVITDFGG 227
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 1-213 3.56e-32

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 117.07  E-value: 3.56e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKLTAALFFYSLgmsLSAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIeniDSKNKTAPP------FIVT 74
Cdd:PRK15253  16 MKILSAVLLSAII---LPAHAGIVIYGTRVIYPAEKKEVVVQLVN-QGEQASLVQSWI---DDGNTSLPPekiqvpFMLT 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  75 PTLFRLDAEQKNSLRINYLGTPLPTDRESVFWLNIKNIAPSKKANSNK--LQINVKSKFKLFFRPAGLKGNAELAYKKLK 152
Cdd:PRK15253  89 PPVARVAAESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKnvLKFAMQNRIKLIWRPSRIAAVTKDSFQRIG 168

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550715262 153 FTCRNNTLSAHNPSPWFVSFYKVSVGNTDV-EMPGMIDPFSARQWHIPCSGTIRWQA--INDYG 213
Cdd:PRK15253 169 LFRSNKTVIMKNDTANWITVTDVKAGNTKInDQTIMLPPLSTQNINMKYASTSQYEVtiIDDNG 232
PRK15246 PRK15246
fimbrial assembly chaperone;
14-217 2.55e-30

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 111.98  E-value: 2.55e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  14 GMSLSAHAGVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIE--NID-SKNKTAPPFIVTPTLFRLDAEQKNSLRI 90
Cdd:PRK15246   3 GWYGPAQAAVNIDRTRIIFASDDVAQSLTLSN-DNTTPMLLQVWTDagNIDaSPDNSKTPLVALPPVFKMQPGELRTLRL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  91 NYLG-TPLPTDRESVFWLNIKNIAPSKKANSN---KLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRNNTLSAHNPS 166
Cdd:PRK15246  82 LLSSrQQLATDRESLFWLNIYQIPPVTQDIKNhprKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPT 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 550715262 167 PWFVSFyKVSVGNTDVEMPGMIDPFSARQWHI---PCSG-TIRWQAINDYGGLTR 217
Cdd:PRK15246 162 SWYMSL-TLTMDNKKSIGDIMVAPKTALDVPLtrsPTPGaSINYAVINDSGNWRQ 215
PRK11385 PRK11385
fimbrial chaperone;
6-222 6.24e-30

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 110.99  E-value: 6.24e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   6 AALFFYSLGMSLSA--HAGVVMGGTRVVYLEGQREVAFSITNMEKETpYLIQSWIEN----IDSKNKTAP-PFIVTPTLF 78
Cdd:PRK11385   9 ALLIFAVLSLLVAGelQAGVVVGGTRFIFPADRESISILLTNTSQES-WLINSKINRptrwAGGEASTVPaPLLAAPPLI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  79 RLDAEQKNSLRINYLGTP-LPTDRESVFWLNIKNIaPSKKANSNKLQINVKSKFKLFFRPAGLKGNAELAYKKLKFTCRN 157
Cdd:PRK11385  88 LLKPGTTGTLRLLRTESDiLPVDRETLFELSIASV-PSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNS 166

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262 158 NTLSAHNPSPWFVSFYKVSVGNTDVEMPGMIDPFSARQ--WH---IPCSgtIRWQAINDYGGLTRVATQS 222
Cdd:PRK11385 167 QGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQtsWCqaiAPCH--VAWRAINDYGGLSAKKEQN 234
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 21-215 8.82e-27

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 102.93  E-value: 8.82e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  21 AGVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENIDSKNKTAppFIVTPTLFRLDAEQKNSLRINY---LGTPL 97
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDA--LMALPPLQRIDAGQKSQVRITQvrgLTDKL 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  98 PTDRESVFWLNIKNIaPSKKANSNKLQINVKSKFKLFFRP-AGLKGNAELAYKKLKFTCRNNTLSAHNPSPWFVSF---- 172
Cdd:PRK15254  94 PQDRETLFWFNVRGV-PPKPEDDNVLQLAMQSQLKLFYRPkAIIRSSSDQPERKLTAERNAGHLTLRNPTPYYITVawlg 172

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 550715262 173 ----YKVSVGNTDVEMPGMID-PFSARqwhIPCSGTIRWQA-INDYGGL 215
Cdd:PRK15254 173 adrsHRLSGFREGVMVPPLGSlPLKAV---LPAETRTLWVGyIDDYGGL 218
PRK15218 PRK15218
fimbrial assembly chaperone;
1-179 1.31e-23

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 94.28  E-value: 1.31e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   1 MKKLTAALFfysLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETPyLIQSWIENIDSK---NKTAPPFIVTPTL 77
Cdd:PRK15218   1 MKWMIALCL---ACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSS-LIQAWIDNGDTSlppEKLQVPFIMTPPV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  78 FRLDAEQKNSLRINYLGTPLPTDRESVFWLNIKNIAPSKKANSNK--LQINVKSKFKLFFRPAGLKGNAELAYKKLKFTC 155
Cdd:PRK15218  77 IRVAANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDENKDKniIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLR 156

                        170       180
                 ....*....|....*....|....
gi 550715262 156 RNNTLSAHNPSPWFVSFYKVSVGN 179
Cdd:PRK15218 157 APGSISVKNNSANWITIPEIKAKS 180
PRK15233 PRK15233
fimbrial chaperone SefB;
22-195 6.10e-21

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 87.47  E-value: 6.10e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  22 GVVMGGTRVVYLEGQREVAFSITNmEKETPYLIQSWIENIDSKNKTapPFIVTPTLFRLDAEQKNSLRINYLGTPLPTDR 101
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMN-EKEYPILVQTQVYNDDKSSKA--PFIVTPPILKVESNARTRLKVIPTSNLFNKNE 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262 102 ESVFWLNIKNIAPSKKANSN-------KLQINV--KSKFKLFFRPAGLKGNAELAYKKLKFTCRNNTLSAHNPSPWFVSF 172
Cdd:PRK15233 118 ESLYWLCVKGVPPLNDNESNnknnittNLNVNVvtNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNI 197

                        170       180
                 ....*....|....*....|....
gi 550715262 173 YKVSVGNTDVEMP-GMIDPFSARQ 195
Cdd:PRK15233 198 ANIKSGNLSFNIPnGYIEPFGYAQ 221
PRK15285 PRK15285
fimbrial chaperone StfD;
6-176 4.99e-20

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 85.22  E-value: 4.99e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262   6 AALFFYSLGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENiDSKNKTAPPFIVTPTLFRLDAEQK 85
Cdd:PRK15285  10 AAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVED-EKGVKITSPLIVVPPVQRIEPSAI 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  86 NSLRINylGTP----LPTDRESVFWLNIKNIaPSKKANSNKLQINVKSKFKLFFRPAGL-KGNAELAYK-KLKFTCRNNT 159
Cdd:PRK15285  89 GQVKIQ--GMPalasLPQDRETLFYYNVREI-PPQSDKPNTLQIALQTRIKVFYRPQALsKIDMQHPWQyKITLQRQGNG 165

                        170
                 ....*....|....*..
gi 550715262 160 LSAHNPSPWFVSFYKVS 176
Cdd:PRK15285 166 YQVSNPTGYYVVLSNAS 182
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 13-170 2.85e-19

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 83.29  E-value: 2.85e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  13 LGMSLSAHAGVVMGGTRVVYLEGQREVAFSITNMEKETPYLIQSWIENiDSKNKTAPPFIVTPTLFRLDAEQKNSLRINY 92
Cdd:PRK15274  18 LAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLED-DKFAKDTRYFTALPPLQRIEPKSDGQVKVQP 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550715262  93 L--GTPLPTDRESVFWLNIKNIaPSKKANSNKLQINVKSKFKLFFRPAGLKGNAELAY---KKLKFTCRNNTLSAHNPSP 167
Cdd:PRK15274  97 LpaAASLPQDRESLFYFNVREI-PPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHpwqTKLTLTYQGDGVIFDNPTP 175


                 ...
gi 550715262 168 WFV 170
Cdd:PRK15274 176 FYL 178
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 163-217 3.88e-14

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 64.59  E-value: 3.88e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 550715262  163 HNPSPWFVSFYKVSVGNTDVEM---PGMIDPFSARQWHIPCS----GTIRWQAINDYGGLTR 217
Cdd:pfam02753   2 KNPTPYYVTFSSLSLGGGGKELaldPGMVAPFSSQTFAGLPApaagGTVSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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