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Conserved domains on  [gi|550714626|ref|WP_022647515|]
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MULTISPECIES: molecular chaperone [Enterobacter]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-216 5.95e-86

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 254.14  E-value: 5.95e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGY----LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSG----GKNPAKAPFLITPP 72
Cdd:COG3121    1 MKRLLrlllLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWdqdaGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  73 LFRLDAKEDNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVE-GVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWH 151
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEeGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 550714626 152 REGNDLVVNNPTPFYMNFQTVTLN--GQKVTKATWAV-PKSETHFAIPGNV---GGSNVTYSIINDYGSIS 216
Cdd:COG3121  161 LVGNGLTVTNPGPYYVTLSDLSLGagGKKLKKGLGMVlPGSTRRWPLPAGAslaAGGKVTWATINDYGGAV 231
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-216 5.95e-86

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 254.14  E-value: 5.95e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGY----LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSG----GKNPAKAPFLITPP 72
Cdd:COG3121    1 MKRLLrlllLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWdqdaGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  73 LFRLDAKEDNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVE-GVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWH 151
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEeGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 550714626 152 REGNDLVVNNPTPFYMNFQTVTLN--GQKVTKATWAV-PKSETHFAIPGNV---GGSNVTYSIINDYGSIS 216
Cdd:COG3121  161 LVGNGLTVTNPGPYYVTLSDLSLGagGKKLKKGLGMVlPGSTRRWPLPAGAslaAGGKVTWATINDYGGAV 231
PRK15295 PRK15295
fimbrial assembly chaperone;
1-213 1.10e-79

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 237.92  E-value: 1.10e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGYLLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVD-SGGKNPAKAPFLITPPLFRLDAK 79
Cdd:PRK15295   1 KHIKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSvVDPQVTNKQAFIITPPLFRLDAG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  80 EDNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVEGVNTLQIAINTRIKLLYRPSAVKGR-PEDVADKLEWHREGNDLV 158
Cdd:PRK15295  81 QKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKStPDSQSQQLKWQTAGDVIT 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 550714626 159 VNNPTPFYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGS-NVTYSIINDYG 213
Cdd:PRK15295 161 VNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHgTVTWRLISDYG 216
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 21-138 2.13e-58

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 180.09  E-value: 2.13e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   21 VVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGG----KNPAKAPFLITPPLFRLDAKEDNVLRVVRTGGNLPED 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNeegtDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 550714626   97 RESLYWLNIKAIPS-SKHVEGVNTLQIAINTRIKLLYRPSAVK 138
Cdd:pfam00345  81 RESLFWLNVLEIPPkDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-216 5.95e-86

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 254.14  E-value: 5.95e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGY----LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSG----GKNPAKAPFLITPP 72
Cdd:COG3121    1 MKRLLrlllLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWdqdaGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  73 LFRLDAKEDNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVE-GVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWH 151
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEeGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 550714626 152 REGNDLVVNNPTPFYMNFQTVTLN--GQKVTKATWAV-PKSETHFAIPGNV---GGSNVTYSIINDYGSIS 216
Cdd:COG3121  161 LVGNGLTVTNPGPYYVTLSDLSLGagGKKLKKGLGMVlPGSTRRWPLPAGAslaAGGKVTWATINDYGGAV 231
PRK15295 PRK15295
fimbrial assembly chaperone;
1-213 1.10e-79

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 237.92  E-value: 1.10e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGYLLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVD-SGGKNPAKAPFLITPPLFRLDAK 79
Cdd:PRK15295   1 KHIKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSvVDPQVTNKQAFIITPPLFRLDAG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  80 EDNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVEGVNTLQIAINTRIKLLYRPSAVKGR-PEDVADKLEWHREGNDLV 158
Cdd:PRK15295  81 QKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKStPDSQSQQLKWQTAGDVIT 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 550714626 159 VNNPTPFYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGS-NVTYSIINDYG 213
Cdd:PRK15295 161 VNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHgTVTWRLISDYG 216
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 6-213 1.17e-70

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 215.41  E-value: 1.17e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKNPAK--APFLITPPLFRLDAKEDNV 83
Cdd:PRK15299   9 LLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASgdAPFMVTPPLFRLNGGQKNV 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  84 LRVVRTGGNLPEDRESLYWLNIKAIPSSKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNPT 163
Cdd:PRK15299  89 LRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPT 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 550714626 164 PFYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGSnVTYSIINDYG 213
Cdd:PRK15299 169 PYYMNFATLSVGSQKVKAPRYVAPFGNAQYTLPAAASGP-IAWSIINDFG 217
PRK15208 PRK15208
molecular chaperone LpfB;
2-223 2.56e-66

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 204.37  E-value: 2.56e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   2 RHGYLLSTLLLIAASAHA-GVVINGTRLVYQGDKKESSLGLSNPDTTD-YLVQSWVDSGGKNpAKAPFLITPPLFRLDAK 79
Cdd:PRK15208   3 LISFTALALALIAQNSFAgGVALSSTRVIYDGSKKEASLTVNNKSKTEeFLIQSWIDDANGN-KKTPFIITPPLFKLDPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  80 EDNVLRVVRTGGNLPEDRESLYWLNIKAIPS-SKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLV 158
Cdd:PRK15208  82 KNNVLRIVNITNTLPQDRESVYWINVKAIPAkSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIK 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 550714626 159 VNNPTPFYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGG-SNVTYSIINDYGSISHSWSKSV 223
Cdd:PRK15208 162 VENPSAFNLTFNQFYANGRDIEKAGMVPAKGSLNIELPAGTGKvSEVKYNIINDFGTAGEMLTKRV 227
lfpB PRK15290
fimbrial chaperone;
6-216 5.60e-63

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 196.36  E-value: 5.60e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTT-DYLVQSWVDSGGK-NPAKAPFLITPPLFRLDAKEDNV 83
Cdd:PRK15290  24 ILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKeDKSKAPFTVIPPVSRLEPSQEKV 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  84 LRVVRTGG-NLPEDRESLYWLNIKAIPSSKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNP 162
Cdd:PRK15290 104 LRIIHTKGvSLPDDRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLIAENP 183

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 550714626 163 TPFYMNFQTVTLNGQKVtKATWAVPKSETHFAIPGNVGGSNVTYSIINDYGSIS 216
Cdd:PRK15290 184 NPIHISVMDVIVDGHDV-PLNMIRPFETLTLPLPANSAGGQMTWRFINDYGAVS 236
PRK15195 PRK15195
molecular chaperone FimC;
4-216 1.16e-58

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 184.68  E-value: 1.16e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   4 GYLLSTLLLIAASAHA--GVVINGTRLVYQGDKKESSLGLSNPDTTD-YLVQSWVDSGGKNPAKApFLITPPLFRLDAKE 80
Cdd:PRK15195   8 GMIIIFYLIISASVHAagGIALGATRVIYPADAKQTSLAIRNSHTNErYLVNSWIENSSGVKEKS-FIVTPPLFVSEPKS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  81 DNVLRVVRTGGNLPEDRESLYWLNIKAIPS--SKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLV 158
Cdd:PRK15195  87 ENTLRIIYAGPPLAADRESLFWMNVKAIPSvdKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLK 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 550714626 159 VNNPTPFYMNFQTVTLNGQKVTKATWAvPKSETHFAIPGNVGGsNVTYSIINDYGSIS 216
Cdd:PRK15195 167 VHNPSPYYVTLVNLQVGSQKLGNAMIA-PKVNSQIPLPSGVQG-KLKFQTVNDYGAVT 222
PRK09926 PRK09926
fimbrial chaperone;
6-215 1.50e-58

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 184.92  E-value: 1.50e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKN--PA--KAPFLITPPLFRLDAKED 81
Cdd:PRK09926  12 CFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNaePGsiKVPFTATPPVSRIDPKRG 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  82 NVLRVVRTGGN-LPEDRESLYWLNIKAIP---SSKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWH--REGN 155
Cdd:PRK09926  92 QTIKLMYTASTaLPKDRESVFWFNVLEVPpkpDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSwaGSEG 171

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550714626 156 D--LVVNNPTPFYMNFQTVTL--NGQKVT-KATWAVPKSETHFAI---PGNVGGSNVTYSIINDYGSI 215
Cdd:PRK09926 172 KasLRVTNPTPYYVSFSSGDLeaGGKRYPvDSKMIAPFSDESMKVkglSGKASSGKVHFYAINDFGGA 239
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 21-138 2.13e-58

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 180.09  E-value: 2.13e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   21 VVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGG----KNPAKAPFLITPPLFRLDAKEDNVLRVVRTGGNLPED 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNeegtDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 550714626   97 RESLYWLNIKAIPS-SKHVEGVNTLQIAINTRIKLLYRPSAVK 138
Cdd:pfam00345  81 RESLFWLNVLEIPPkDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
PRK15224 PRK15224
pili assembly chaperone PapD;
12-217 1.17e-54

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 174.93  E-value: 1.17e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  12 LIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKNpAKAPFLITPPLFRLDAKEDNVLRVVRTGG 91
Cdd:PRK15224  21 LNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKS-SPAPFLVMPPLFRLEANQQSQLRIVRTGG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  92 NLPEDRESLYWLNIKAIP-----SSKHVEGVN-TLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNPTPF 165
Cdd:PRK15224 100 DMPTDRETLQWVCIKAVPpenepSDTQAKGATlDLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPF 179

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 550714626 166 YMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGsNVTYSIINDYGSISH 217
Cdd:PRK15224 180 YMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHG-DIEWRVITDFGGESH 230
PRK15211 PRK15211
fimbrial chaperone;
1-213 5.59e-48

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 157.29  E-value: 5.59e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGYLLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKNPAKAPFLITPPLFRLDAKE 80
Cdd:PRK15211   4 MKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTTQGSSTVYMVPAPPFFKVRPKE 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  81 DNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVN 160
Cdd:PRK15211  84 KQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKASEGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGETYLK 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626 161 NPTPFYMNFQTVTLNGQKV-------TKATWAVPKSETHFAIPgnVGGSNVTYSIINDYG 213
Cdd:PRK15211 164 NPTPYYFAVTGVKLNGQPVklsdrvmNEIAQLAPFSEVSLGKL--SLNGTVTVQAVNDWG 221
PRK15249 PRK15249
fimbrial chaperone;
1-219 4.46e-39

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 135.31  E-value: 4.46e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   1 MRHGYLLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGG-----KNPAKAPFLITPPLFR 75
Cdd:PRK15249  10 LYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDmntspENSSAMPFIATPPVFR 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  76 LDAKEDNVLRVVRTGGN-LPEDRESLYWLNIKAIPSS--KHVEGVNTLQIAINTRIKLLYRPSAVkGRPEDVADKLE--- 149
Cdd:PRK15249  90 IQPKAGQVVRVIYNNTKkLPQDRESVFWFNVLQVPPTniGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQikt 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626 150 --WHREGNDLVVNNPTPFYMNFQ--TVTLNGQKV-TKATWAVPKSETHFAIPGNV----GGSNVTYSIINDYGS-ISHSW 219
Cdd:PRK15249 169 vnKGSGKSGIVIVNPQPWFASLSnlNVKVNGASYnLDADMIAPFSSQTWWLPGKRslksFSGTVTVTLVNDQGArISESY 248
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
11-215 2.62e-37

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 130.21  E-value: 2.62e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  11 LLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKNPAK------APFLITPPLFRLDAKEDNVL 84
Cdd:PRK15192  14 LLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTknegniTPFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  85 RVVRTGGNLPEDRESLYWLNIKAIPSSKhvEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNPTP 164
Cdd:PRK15192  94 RVVYTGAPLPADRESLFTLSIAAIPSGK--PEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTP 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 550714626 165 FYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGSNVTYSIINDYGSI 215
Cdd:PRK15192 172 YYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHTVRCTVRWQSINDYGRV 222
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 6-214 2.67e-36

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 127.86  E-value: 2.67e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAA--SAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKN--PAK--APFLITPPLFRLDAK 79
Cdd:PRK15253  18 ILSAVLLSAIilPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSlpPEKiqVPFMLTPPVARVAAE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  80 EDNVLRVVRTGGNLPEDRESLYWLNIKAI-PSSKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLV 158
Cdd:PRK15253  98 SGQQIKIKKMPNSLPDNKESLFYLNVLDIpPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVI 177

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 550714626 159 VNNPTPFYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGSNVTYSIINDYGS 214
Cdd:PRK15253 178 MKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGN 233
PRK11385 PRK11385
fimbrial chaperone;
11-216 2.38e-35

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 125.25  E-value: 2.38e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  11 LLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVD-----SGGK-NPAKAPFLITPPLFRLDAKEDNVL 84
Cdd:PRK11385  18 LLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrptrwAGGEaSTVPAPLLAAPPLILLKPGTTGTL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  85 RVVRTGGN-LPEDRESLYWLNIKAIPSSKhVEGvNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNPT 163
Cdd:PRK11385  98 RLLRTESDiLPVDRETLFELSIASVPSGK-VEN-QSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPT 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 550714626 164 PFYMNFQTVTLNGQKVTKATWAVPKSETHFAIPGNVGGSNVTYSIINDYGSIS 216
Cdd:PRK11385 176 PYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLS 228
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 6-216 8.21e-33

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 118.33  E-value: 8.21e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNP-DTTDYLVQSWVdSGGKNPAKAPFLITPPLFRLDAKEDNVL 84
Cdd:PRK15188  14 LLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSsASNVFLIQSWV-ANADGSRSTDFIITPPLFVIQPKKENIL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  85 RVVRTGGNLPEDRESLYWLNIKAIPS-SKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNPT 163
Cdd:PRK15188  93 RIMYVGPSLPTDRESVFYLNSKAIPSvDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPS 172

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 550714626 164 PFYMNFQTVTLNGQKVTKaTWAVPKSE-THFAIPGnvggsNVTYSIINDYGSIS 216
Cdd:PRK15188 173 PYYVSMVELYSAGKKLPN-TMVPPKGAiTLPATPG-----QVSLRTVNDFGATT 220
PRK15246 PRK15246
fimbrial assembly chaperone;
10-214 9.83e-32

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 115.83  E-value: 9.83e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  10 LLLIAASAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSG----GKNPAKAPFLITPPLFRLDAKEDNVLR 85
Cdd:PRK15246   1 LTGWYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGnidaSPDNSKTPLVALPPVFKMQPGELRTLR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  86 VV---RTGgnLPEDRESLYWLNIKAIPSSKHVEGVNT--LQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVN 160
Cdd:PRK15246  81 LLlssRQQ--LATDRESLFWLNIYQIPPVTQDIKNHPrkLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIV 158

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 550714626 161 NPTPFYMNFqTVTLNGQKVTKATWAVPKSETHFAIP-GNVGGSNVTYSIINDYGS 214
Cdd:PRK15246 159 NPTSWYMSL-TLTMDNKKSIGDIMVAPKTALDVPLTrSPTPGASINYAVINDSGN 212
PRK15218 PRK15218
fimbrial assembly chaperone;
6-214 1.04e-31

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 115.46  E-value: 1.04e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAA-SAHAGVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKN--PAK--APFLITPPLFRLDAKE 80
Cdd:PRK15218   4 MIALCLACAAmPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSlpPEKlqVPFIMTPPVIRVAANS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  81 DNVLRVVRTGGNLPEDRESLYWLNIKAI-PSSKHVEGVNTLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVV 159
Cdd:PRK15218  84 GQQLKIKKLANNLPGDRESLFYLNVLDIpPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISV 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 550714626 160 NNPTPFYMNFQTVTlNGQKVTKATWAVPKSETHfAIPGNVGGSNVTYSIINDYGS 214
Cdd:PRK15218 164 KNNSANWITIPEIK-AKSKVNKETLLLAPWSSQ-SITTTVVVNSYTVTLIDDSGN 216
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 6-213 4.24e-29

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 109.48  E-value: 4.24e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   6 LLSTLLLIAA-SAHAGVVINGTRLVYQGDKKESSLGLSNPDTT-DYLVQSWVDSGGKNPAKAPFLITPPLFRLDAKEDNV 83
Cdd:PRK15274  12 LIASVLLAAPlVSHSAIVPDRTRVIFNGNENSITVTLKNGNATlPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQ 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  84 LRV--VRTGGNLPEDRESLYWLNIKAIPSSKhvEGVNTLQIAINTRIKLLYRPSAVKGRPEDV---ADKLEWHREGNDLV 158
Cdd:PRK15274  92 VKVqpLPAAASLPQDRESLFYFNVREIPPKS--DKPNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLTYQGDGVI 169

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 550714626 159 VNNPTPFYMnfqTVTLNGQKVT------KATWAVPKSETHFAIPGNVGGSNVTYSIINDYG 213
Cdd:PRK15274 170 FDNPTPFYL---VISNAGSKENetasgfKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYG 227
PRK15285 PRK15285
fimbrial chaperone StfD;
5-214 4.64e-27

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 104.09  E-value: 4.64e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   5 YLLSTLLLIA----ASAHAGVVINGTRLVYQGDKKESSLGLSNPDTT-DYLVQSWVDSGGKNPAKAPFLITPPLFRLDAK 79
Cdd:PRK15285   7 YNLAAVLLLLlggyGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  80 EDNVLRV--VRTGGNLPEDRESLYWLNIKAIPSSKhvEGVNTLQIAINTRIKLLYRPSAVK--GRPEDVADKLEWHREGN 155
Cdd:PRK15285  87 AIGQVKIqgMPALASLPQDRETLFYYNVREIPPQS--DKPNTLQIALQTRIKVFYRPQALSkiDMQHPWQYKITLQRQGN 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 550714626 156 DLVVNNPTPFYMNFQTVT--LNGQKVTKATWAV--PKSETHFAIPGNVGGSNVTYSIINDYGS 214
Cdd:PRK15285 165 GYQVSNPTGYYVVLSNASnrMDGTPARGFSPLViaPKSNVTLGGDASELGHSPVLTYVNDYGA 227
PRK15233 PRK15233
fimbrial chaperone SefB;
20-214 8.61e-27

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 103.27  E-value: 8.61e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  20 GVVINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGGKNpAKAPFLITPPLFRLDAKEDNVLRVVRTGGNLPEDRES 99
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKS-SKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEES 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626 100 LYWLNIKAIPSSKHVEGVN--------TLQIAINTRIKLLYRPSAVKGRPEDVADKLEWHREGNDLVVNNPTPFYMNFQT 171
Cdd:PRK15233 120 LYWLCVKGVPPLNDNESNNknnittnlNVNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIAN 199

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 550714626 172 VtlngqKVTKATWAVPKSET----HFAIPGNVgGSNVTYSIINDYGS 214
Cdd:PRK15233 200 I-----KSGNLSFNIPNGYIepfgYAQLPGGV-HSKITLTILDDNGA 240
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 10-167 9.68e-26

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 100.23  E-value: 9.68e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  10 LLLIAAS----AHAGVVINGTRLVYQGDKKESSLGLSNPD-TTDYLVQSWVDSGGKNPAKApFLITPPLFRLDAKEDNVL 84
Cdd:PRK15254   3 LLALAAAwsqySPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTDA-LMALPPLQRIDAGQKSQV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  85 RVVRTGG---NLPEDRESLYWLNIKAIPSSKhvEGVNTLQIAINTRIKLLYRPSAVKGRPEDVAD-KLEWHREGNDLVVN 160
Cdd:PRK15254  82 RITQVRGltdKLPQDRETLFWFNVRGVPPKP--EDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHLTLR 159


                 ....*..
gi 550714626 161 NPTPFYM 167
Cdd:PRK15254 160 NPTPYYI 166
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 159-216 5.27e-14

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 64.21  E-value: 5.27e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 550714626  159 VNNPTPFYMNFQTVTLNGQKVTKATWAV---PKSETHFAI-PGNVGGSNVTYSIINDYGSIS 216
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGmvaPFSSQTFAGlPAPAAGGTVSYTYINDYGGIV 62
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 5-189 3.09e-11

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 60.82  E-value: 3.09e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626   5 YLLSTLLLIAASAHA-GVVINGTRLVYQGDKKESSLGLSNPDTTD-YLVQSWVDSGGKNPAKapFLITPPLFRLDAKEDN 82
Cdd:PRK09918   9 FTALVLLSSSSAVHAaGMVPETSVVIVEESDGEGSINVKNTDSNPiLLYTTLVDLPEDKSKL--LLVTPPVARVEPGQSQ 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714626  83 VLRVVRTGGNlPEDRESLYWLNIKAIPSSKhvEGVNTLQIAINTRIKLLYRPSAVKgRPEDVADKLEWHREGNDLVVNNP 162
Cdd:PRK09918  87 QVRFILKSGS-PLNTEHLLRVSFEGVPPKP--GGKNKVVMPIRQDLPVLIQPAALP-VVRDPWKLLVWSISGNNLVVSNP 162

                        170       180       190
                 ....*....|....*....|....*....|.
gi 550714626 163 TPFymnfqTVTLnGQKVT----KATWAVPKS 189
Cdd:PRK09918 163 SPY-----VVRL-GQQVIllpsGKVVALPKP 187
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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