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Conserved domains on  [gi|544825110|ref|WP_021241110|]
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cysteine desulfurase SufS [Enterobacter roggenkampii]

Protein Classification

cysteine desulfurase( domain architecture ID 10793188)

cysteine desulfurase is a pyridoxal-5'-phoshate dependent enzyme that catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK09295 PRK09295
cysteine desulfurase SufS;
1-406 0e+00

cysteine desulfurase SufS;


:

Pssm-ID: 181766 [Multi-domain]  Cd Length: 406  Bit Score: 820.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   1 MSFPVEKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFL 80
Cdd:PRK09295   1 MTFSVEKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  81 NARSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLL 160
Cdd:PRK09295  81 NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 161 LDDRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKE 240
Cdd:PRK09295 161 FDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 241 EILQAMPPWEGGGSMIATVSLTEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASV 320
Cdd:PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 321 PDLTLYGPADRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKR 400
Cdd:PRK09295 321 PDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQR 400

                 ....*.
gi 544825110 401 IHQLLG 406
Cdd:PRK09295 401 IHRLLG 406
 
Name Accession Description Interval E-value
PRK09295 PRK09295
cysteine desulfurase SufS;
1-406 0e+00

cysteine desulfurase SufS;


Pssm-ID: 181766 [Multi-domain]  Cd Length: 406  Bit Score: 820.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   1 MSFPVEKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFL 80
Cdd:PRK09295   1 MTFSVEKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  81 NARSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLL 160
Cdd:PRK09295  81 NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 161 LDDRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKE 240
Cdd:PRK09295 161 FDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 241 EILQAMPPWEGGGSMIATVSLTEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASV 320
Cdd:PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 321 PDLTLYGPADRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKR 400
Cdd:PRK09295 321 PDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQR 400

                 ....*.
gi 544825110 401 IHQLLG 406
Cdd:PRK09295 401 IHRLLG 406
sufS TIGR01979
cysteine desulfurases, SufSfamily; This model represents a subfamily of NifS-related cysteine ...
6-406 0e+00

cysteine desulfurases, SufSfamily; This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 131034 [Multi-domain]  Cd Length: 403  Bit Score: 644.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110    6 EKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSP 85
Cdd:TIGR01979   1 KNIRADFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   86 EELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRT 165
Cdd:TIGR01979  81 EEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  166 RLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQA 245
Cdd:TIGR01979 161 KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  246 MPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTL 325
Cdd:TIGR01979 241 MPPFLGGGEMIAEVSF-EETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRI 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  326 YGP---ADRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRIH 402
Cdd:TIGR01979 320 YGPrdaEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVR 399

                  ....
gi 544825110  403 QLLG 406
Cdd:TIGR01979 400 KFFG 403
CsdA COG0520
Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism];
5-404 0e+00

Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism];


Pssm-ID: 440286 [Multi-domain]  Cd Length: 396  Bit Score: 590.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   5 VEKVRADFPVltrevNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARS 84
Cdd:COG0520    2 VEAIRADFPV-----LGKPLVYLDNAATGQKPRPVIDAIRDYYEPYNANVHRGAHELSAEATDAYEAAREKVARFIGAAS 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  85 PEELVFVRGTTEGINLVANSWGNaqVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDR 164
Cdd:COG0520   77 PDEIIFTRGTTEAINLVAYGLGR--LKPGDEILITEMEHHSNIVPWQELAERTGAEVRVIPLDEDGELDLEALEALLTPR 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 165 TRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQ 244
Cdd:COG0520  155 TKLVAVTHVSNVTGTVNPVKEIAALAHAHGALVLVDGAQSVPHLPVDVQALGCDFYAFSGHKLYGPTGIGVLYGKRELLE 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 245 AMPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLT 324
Cdd:COG0520  235 ALPPFLGGGGMIEWVSF-DGTTYADLPRRFEAGTPNIAGAIGLGAAIDYLEAIGMEAIEARERELTAYALEGLAAIPGVR 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 325 LYGPAD---RQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRI 401
Cdd:COG0520  314 ILGPADpedRSGIVSFNVDGVHPHDVAALLDDEGIAVRAGHHCAQPLMRRLGVPGTVRASFHLYNTEEEIDRLVEALKKL 393

                 ...
gi 544825110 402 HQL 404
Cdd:COG0520  394 AEL 396
SufS_like cd06453
Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP) ...
26-398 0e+00

Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.


Pssm-ID: 99746 [Multi-domain]  Cd Length: 373  Bit Score: 567.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  26 YLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSPEELVFVRGTTEGINLVANSW 105
Cdd:cd06453    2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 106 GNAQvHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTENPVAE 185
Cdd:cd06453   82 GRAN-KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 186 IVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQAMPPWEGGGSMIATVSLtEGT 265
Cdd:cd06453  161 IGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSF-EET 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 266 TYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTLYGPA-DRQGVIAFNLGKHHA 344
Cdd:cd06453  240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAeDRAGVVSFNLEGIHP 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 544825110 345 YDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGL 398
Cdd:cd06453  320 HDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373
f2_encap_cargo1 NF041166
family 2A encapsulin nanocompartment cargo protein cysteine desulfurase; Capsid-like ...
3-401 0e+00

family 2A encapsulin nanocompartment cargo protein cysteine desulfurase; Capsid-like encapsulin nanocompartments are commonly found in bacteria and archaea. Encapsulin nanocompartments, which are assembled from shell proteins, encapsulate various cargo proteins, typically peroxidases or ferritin-like proteins, to protect cells from oxidative stress caused by peroxide. Proteins of this family are cysteine desulfurases with an additional N-terminal encapsulation targeting sequence (~200 aa) that is necessary and sufficient for compartmentalization.


Pssm-ID: 469077 [Multi-domain]  Cd Length: 623  Bit Score: 527.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   3 FPVEKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNA 82
Cdd:NF041166 225 FDVNAVRRDFPILQERVNGKPLVWFDNAATTQKPQAVIDRLSYFYEHENSNIHRAAHELAARATDAYEGAREKVRRFIGA 304
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  83 RSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLD 162
Cdd:NF041166 305 PSVDEIIFVRGTTEAINLVAKSWGRQNIGAGDEIIVSHLEHHANIVPWQQLAQETGAKLRVIPVDDSGQILLDEYAKLLN 384
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 163 DRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEI 242
Cdd:NF041166 385 PRTKLVSVTQVSNALGTVTPVKEIIALAHRAGAKVLVDGAQSVSHMPVDVQALDADFFVFSGHKVFGPTGIGVVYGKRDL 464
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 243 LQAMPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPD 322
Cdd:NF041166 465 LEAMPPWQGGGNMIADVTF-EKTVYQPAPNRFEAGTGNIADAVGLGAALDYVERIGIENIARYEHDLLEYATAGLAEVPG 543
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 323 LTLYGPA-DRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRI 401
Cdd:NF041166 544 LRLIGTAaDKASVLSFVLDGYSTEEVGKALNQEGIAVRSGHHCAQPILRRFGVEATVRPSLAFYNTCEEVDALVAVLRRL 623
Aminotran_5 pfam00266
Aminotransferase class-V; This domain is found in amino transferases, and other enzymes ...
26-394 0e+00

Aminotransferase class-V; This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.


Pssm-ID: 425567 [Multi-domain]  Cd Length: 368  Bit Score: 521.81  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   26 YLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSPEELVFVRGTTEGINLVANSW 105
Cdd:pfam00266   2 YLDSAATTQKPQEVLDAIQEYYTDYNGNVHRGVHTLGKEATQAYEEAREKVAEFINAPSNDEIIFTSGTTEAINLVALSL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  106 GNAqVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTENPVAE 185
Cdd:pfam00266  82 GRS-LKPGDEIVITEMEHHANLVPWQELAKRTGARVRVLPLDEDGLLDLDELEKLITPKTKLVAITHVSNVTGTIQPVPE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  186 IVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQAMPPWEGGGSMIATVSLtEGT 265
Cdd:pfam00266 161 IGKLAHQYGALVLVDAAQAIGHRPIDVQKLGVDFLAFSGHKLYGPTGIGVLYGRRDLLEKMPPLLGGGGMIETVSL-QES 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  266 TYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTLYGPADRQGVIAFNLGKHHAY 345
Cdd:pfam00266 240 TFADAPWKFEAGTPNIAGIIGLGAALEYLSEIGLEAIEKHEHELAQYLYERLLSLPGIRLYGPERRASIISFNFKGVHPH 319
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 544825110  346 DVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRL 394
Cdd:pfam00266 320 DVATLLDESGIAVRSGHHCAQPLMVRLGLGGTVRASFYIYNTQEDVDRL 368
 
Name Accession Description Interval E-value
PRK09295 PRK09295
cysteine desulfurase SufS;
1-406 0e+00

cysteine desulfurase SufS;


Pssm-ID: 181766 [Multi-domain]  Cd Length: 406  Bit Score: 820.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   1 MSFPVEKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFL 80
Cdd:PRK09295   1 MTFSVEKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  81 NARSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLL 160
Cdd:PRK09295  81 NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 161 LDDRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKE 240
Cdd:PRK09295 161 FDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 241 EILQAMPPWEGGGSMIATVSLTEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASV 320
Cdd:PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 321 PDLTLYGPADRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKR 400
Cdd:PRK09295 321 PDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQR 400

                 ....*.
gi 544825110 401 IHQLLG 406
Cdd:PRK09295 401 IHRLLG 406
sufS TIGR01979
cysteine desulfurases, SufSfamily; This model represents a subfamily of NifS-related cysteine ...
6-406 0e+00

cysteine desulfurases, SufSfamily; This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 131034 [Multi-domain]  Cd Length: 403  Bit Score: 644.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110    6 EKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSP 85
Cdd:TIGR01979   1 KNIRADFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   86 EELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRT 165
Cdd:TIGR01979  81 EEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  166 RLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQA 245
Cdd:TIGR01979 161 KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  246 MPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTL 325
Cdd:TIGR01979 241 MPPFLGGGEMIAEVSF-EETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRI 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  326 YGP---ADRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRIH 402
Cdd:TIGR01979 320 YGPrdaEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVR 399

                  ....
gi 544825110  403 QLLG 406
Cdd:TIGR01979 400 KFFG 403
CsdA COG0520
Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism];
5-404 0e+00

Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism];


Pssm-ID: 440286 [Multi-domain]  Cd Length: 396  Bit Score: 590.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   5 VEKVRADFPVltrevNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARS 84
Cdd:COG0520    2 VEAIRADFPV-----LGKPLVYLDNAATGQKPRPVIDAIRDYYEPYNANVHRGAHELSAEATDAYEAAREKVARFIGAAS 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  85 PEELVFVRGTTEGINLVANSWGNaqVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDR 164
Cdd:COG0520   77 PDEIIFTRGTTEAINLVAYGLGR--LKPGDEILITEMEHHSNIVPWQELAERTGAEVRVIPLDEDGELDLEALEALLTPR 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 165 TRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQ 244
Cdd:COG0520  155 TKLVAVTHVSNVTGTVNPVKEIAALAHAHGALVLVDGAQSVPHLPVDVQALGCDFYAFSGHKLYGPTGIGVLYGKRELLE 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 245 AMPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLT 324
Cdd:COG0520  235 ALPPFLGGGGMIEWVSF-DGTTYADLPRRFEAGTPNIAGAIGLGAAIDYLEAIGMEAIEARERELTAYALEGLAAIPGVR 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 325 LYGPAD---RQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRI 401
Cdd:COG0520  314 ILGPADpedRSGIVSFNVDGVHPHDVAALLDDEGIAVRAGHHCAQPLMRRLGVPGTVRASFHLYNTEEEIDRLVEALKKL 393

                 ...
gi 544825110 402 HQL 404
Cdd:COG0520  394 AEL 396
SufS_like cd06453
Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP) ...
26-398 0e+00

Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.


Pssm-ID: 99746 [Multi-domain]  Cd Length: 373  Bit Score: 567.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  26 YLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSPEELVFVRGTTEGINLVANSW 105
Cdd:cd06453    2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 106 GNAQvHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTENPVAE 185
Cdd:cd06453   82 GRAN-KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 186 IVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQAMPPWEGGGSMIATVSLtEGT 265
Cdd:cd06453  161 IGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSF-EET 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 266 TYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTLYGPA-DRQGVIAFNLGKHHA 344
Cdd:cd06453  240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAeDRAGVVSFNLEGIHP 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 544825110 345 YDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGL 398
Cdd:cd06453  320 HDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373
f2_encap_cargo1 NF041166
family 2A encapsulin nanocompartment cargo protein cysteine desulfurase; Capsid-like ...
3-401 0e+00

family 2A encapsulin nanocompartment cargo protein cysteine desulfurase; Capsid-like encapsulin nanocompartments are commonly found in bacteria and archaea. Encapsulin nanocompartments, which are assembled from shell proteins, encapsulate various cargo proteins, typically peroxidases or ferritin-like proteins, to protect cells from oxidative stress caused by peroxide. Proteins of this family are cysteine desulfurases with an additional N-terminal encapsulation targeting sequence (~200 aa) that is necessary and sufficient for compartmentalization.


Pssm-ID: 469077 [Multi-domain]  Cd Length: 623  Bit Score: 527.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   3 FPVEKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNA 82
Cdd:NF041166 225 FDVNAVRRDFPILQERVNGKPLVWFDNAATTQKPQAVIDRLSYFYEHENSNIHRAAHELAARATDAYEGAREKVRRFIGA 304
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  83 RSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLD 162
Cdd:NF041166 305 PSVDEIIFVRGTTEAINLVAKSWGRQNIGAGDEIIVSHLEHHANIVPWQQLAQETGAKLRVIPVDDSGQILLDEYAKLLN 384
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 163 DRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEI 242
Cdd:NF041166 385 PRTKLVSVTQVSNALGTVTPVKEIIALAHRAGAKVLVDGAQSVSHMPVDVQALDADFFVFSGHKVFGPTGIGVVYGKRDL 464
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 243 LQAMPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPD 322
Cdd:NF041166 465 LEAMPPWQGGGNMIADVTF-EKTVYQPAPNRFEAGTGNIADAVGLGAALDYVERIGIENIARYEHDLLEYATAGLAEVPG 543
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 323 LTLYGPA-DRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRI 401
Cdd:NF041166 544 LRLIGTAaDKASVLSFVLDGYSTEEVGKALNQEGIAVRSGHHCAQPILRRFGVEATVRPSLAFYNTCEEVDALVAVLRRL 623
Aminotran_5 pfam00266
Aminotransferase class-V; This domain is found in amino transferases, and other enzymes ...
26-394 0e+00

Aminotransferase class-V; This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.


Pssm-ID: 425567 [Multi-domain]  Cd Length: 368  Bit Score: 521.81  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   26 YLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSPEELVFVRGTTEGINLVANSW 105
Cdd:pfam00266   2 YLDSAATTQKPQEVLDAIQEYYTDYNGNVHRGVHTLGKEATQAYEEAREKVAEFINAPSNDEIIFTSGTTEAINLVALSL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  106 GNAqVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTENPVAE 185
Cdd:pfam00266  82 GRS-LKPGDEIVITEMEHHANLVPWQELAKRTGARVRVLPLDEDGLLDLDELEKLITPKTKLVAITHVSNVTGTIQPVPE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  186 IVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQAMPPWEGGGSMIATVSLtEGT 265
Cdd:pfam00266 161 IGKLAHQYGALVLVDAAQAIGHRPIDVQKLGVDFLAFSGHKLYGPTGIGVLYGRRDLLEKMPPLLGGGGMIETVSL-QES 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  266 TYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTLYGPADRQGVIAFNLGKHHAY 345
Cdd:pfam00266 240 TFADAPWKFEAGTPNIAGIIGLGAALEYLSEIGLEAIEKHEHELAQYLYERLLSLPGIRLYGPERRASIISFNFKGVHPH 319
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 544825110  346 DVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRL 394
Cdd:pfam00266 320 DVATLLDESGIAVRSGHHCAQPLMVRLGLGGTVRASFYIYNTQEDVDRL 368
PLN02855 PLN02855
Bifunctional selenocysteine lyase/cysteine desulfurase
6-399 5.26e-171

Bifunctional selenocysteine lyase/cysteine desulfurase


Pssm-ID: 215460 [Multi-domain]  Cd Length: 424  Bit Score: 484.64  E-value: 5.26e-171
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   6 EKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSP 85
Cdd:PLN02855  15 AETRPDFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  86 EELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLDDRT 165
Cdd:PLN02855  95 REIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKT 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 166 RLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQA 245
Cdd:PLN02855 175 KLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLES 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 246 MPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPDLTL 325
Cdd:PLN02855 255 MPPFLGGGEMISDVFL-DHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRI 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 326 YGPADRQGV-----IAFNLGKHHAYDVGSFLD-NYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLK 399
Cdd:PLN02855 334 YGPKPSEGVgraalCAFNVEGIHPTDLSTFLDqQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALK 413
PRK10874 PRK10874
cysteine desulfurase CsdA;
1-405 1.30e-136

cysteine desulfurase CsdA;


Pssm-ID: 182799 [Multi-domain]  Cd Length: 401  Bit Score: 396.33  E-value: 1.30e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   1 MSFPVEKVRADFPVLTRevnglPLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFL 80
Cdd:PRK10874   2 NVFNPAQFRAQFPALQD-----AGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  81 NARSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLL 160
Cdd:PRK10874  77 NAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPEL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 161 LDDRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKE 240
Cdd:PRK10874 157 ITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKS 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 241 EILQAMPPWEGGGSMIATVSLtEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASV 320
Cdd:PRK10874 237 ELLEAMSPWQGGGKMLTEVSF-DGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKL 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 321 PDLTLYGPADrQGVIAFNL-GKHHAyDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLK 399
Cdd:PRK10874 316 PGFRSFRCQD-SSLLAFDFaGVHHS-DLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVD 393

                 ....*.
gi 544825110 400 RIHQLL 405
Cdd:PRK10874 394 RALELL 399
FeS_syn_CsdA TIGR03392
cysteine desulfurase, catalytic subunit CsdA; Members of this protein family are CsdS. This ...
3-405 1.59e-127

cysteine desulfurase, catalytic subunit CsdA; Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 274558 [Multi-domain]  Cd Length: 398  Bit Score: 373.40  E-value: 1.59e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110    3 FPVEKVRADFPVLTREvnglpLAYLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNA 82
Cdd:TIGR03392   1 FNPAQFRRQFPALQDA-----TVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQEAQSLTARYEAAREQVAQLLNA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   83 RSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLNADGTLQLEQLDLLLD 162
Cdd:TIGR03392  76 PDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIDQLPELLT 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  163 DRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEI 242
Cdd:TIGR03392 156 PRTRILALGQMSNVTGGCPDLARAITLAHQYGCVVVVDGAQGVVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKTEL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  243 LQAMPPWEGGGSMIATVSLTEGTTYArAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELASVPD 322
Cdd:TIGR03392 236 LEAMPPWQGGGKMLSHVSFDGFTPQA-VPWRFEAGTPNIAGVIGLSAALEWLADIDINAAESWSVSLATLAEEALAQLPG 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  323 LTLYGPADrQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVAGLKRIH 402
Cdd:TIGR03392 315 FRSFRCQG-SSLLAFDFAGVHHSDLVTLLAEQGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVNAVGRAL 393

                  ...
gi 544825110  403 QLL 405
Cdd:TIGR03392 394 ELL 396
am_tr_V_VC1184 TIGR01976
cysteine desulfurase family protein, VC1184 subfamily; This model describes a subfamily of ...
3-398 5.39e-70

cysteine desulfurase family protein, VC1184 subfamily; This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 273906 [Multi-domain]  Cd Length: 397  Bit Score: 225.79  E-value: 5.39e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110    3 FPVEKVRADFPVLTREVnglpLAYLDSAASAQKPNQVVDAEAE-FYRHGyaaVHRGIHTLSAEATQRM-ENVRTQLAAFL 80
Cdd:TIGR01976   1 FDVEAVRGQFPALADGD----RVFFDNPAGTQIPQSVADAVSAaLTRSN---ANRGGAYESSRRADQVvDDAREAVADLL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110   81 NARSPEeLVFVRGTTEGINLVANS----WGnaqvhAGDNIIITQMEHHANIVPWQMLCERVGAQLRVIPLN-ADGTLQLE 155
Cdd:TIGR01976  74 NADPPE-VVFGANATSLTFLLSRAisrrWG-----PGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDeATGELHPD 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  156 QLDLLLDDRTRLVAVTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTgIGV 235
Cdd:TIGR01976 148 DLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH-MGI 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  236 LYVKEEILQAMPPWEgggsmiatvsltEGTTYARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLD--------------A 301
Cdd:TIGR01976 227 LWGRPELLMNLPPYK------------LTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESangsrrerlvasfqA 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  302 IQEYEQLLMHYALAELASVPDLTLYG---PADRQGVIAFNLGKHHAYDVGSFLDNYGVAVRTGHHCAMPLM---AFYQVP 375
Cdd:TIGR01976 295 IDAYENRLAEYLLVGLSDLPGVTLYGvarLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLrrlGLNDEG 374
                         410       420
                  ....*....|....*....|...
gi 544825110  376 AMCRASLVMYNTTEEVDRLVAGL 398
Cdd:TIGR01976 375 GVVRVGLAHYNTAEEVDRLLEAL 397
NifS COG1104
Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family [Amino ...
26-401 1.36e-48

Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family [Amino acid transport and metabolism];


Pssm-ID: 440721 [Multi-domain]  Cd Length: 381  Bit Score: 169.07  E-value: 1.36e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  26 YLDSAASAQKPNQVVDAEAEFYRHGYaavhrG----IHTLSAEATQRMENVRTQLAAFLNARsPEELVFVRGTTEGINLV 101
Cdd:COG1104    5 YLDNAATTPVDPEVLEAMLPYLTEYF-----GnpssLHSFGREARAALEEAREQVAALLGAD-PEEIIFTSGGTEANNLA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 102 ANSWGNAQVHAGDNIIITQMEHHANIVPWQMLcERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTEN 181
Cdd:COG1104   79 IKGAARAYRKKGKHIITSAIEHPAVLETARFL-EKEGFEVTYLPVDEDGRVDLEALEAALRPDTALVSVMHANNETGTIQ 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 182 PVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEIlQAMPPWEGGGSmiatvsl 261
Cdd:COG1104  158 PIAEIAEIAKEHGVLFHTDAVQAVGKIPVDVKELGVDLLSLSAHKIYGPKGVGALYVRKGV-RLEPLIHGGGQ------- 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 262 tEGTtyarapWRfeAGTPNTGGIIGLGAAVSYVSAiGLDAIQEYEQLLMHYALAEL-ASVPDLTLYGPADRQ--GVIAFN 338
Cdd:COG1104  230 -ERG------LR--SGTENVPGIVGLGKAAELAAE-ELEEEAARLRALRDRLEEGLlAAIPGVVINGDPENRlpNTLNFS 299
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 544825110 339 LGKHHAYDVGSFLDNYGVAVRTGHHCA----MP---LMAFYQVPAMCRASLVM----YNTTEEVDRLVAGLKRI 401
Cdd:COG1104  300 FPGVEGEALLLALDLAGIAVSSGSACSsgslEPshvLLAMGLDEELAHGSIRFslgrFTTEEEIDRAIEALKEI 373
PLN02651 PLN02651
cysteine desulfurase
26-392 8.14e-27

cysteine desulfurase


Pssm-ID: 178257 [Multi-domain]  Cd Length: 364  Bit Score: 110.13  E-value: 8.14e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  26 YLDSAASAQKPNQVVDAEAEFYRHGYAAVHRGIHTLSAEATQRMENVRTQLAAFLNArSPEELVFVRGTTEGINL----V 101
Cdd:PLN02651   2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGA-DPKEIIFTSGATESNNLaikgV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 102 ANSWGNAQVHagdnIIITQMEHHANIVPWQMLcERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTEN 181
Cdd:PLN02651  81 MHFYKDKKKH----VITTQTEHKCVLDSCRHL-QQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQ 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 182 PVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEILQAMPP-WEGGGSmiatvs 260
Cdd:PLN02651 156 PVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPlMSGGGQ------ 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 261 ltEGTtyarapwrFEAGTPNTGGIIGLGAAVSYvsaigldAIQEYEQLLMHY-ALAE------LASVPDLTLYGPADRQG 333
Cdd:PLN02651 230 --ERG--------RRSGTENTPLVVGLGAACEL-------AMKEMDYDEKHMkALRErllnglRAKLGGVRVNGPRDPEK 292
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544825110 334 VIAFNLGKHHAY-DVGSFLDNY-GVAVRTGHHCAMP-LMAFYQVPAM----------CRASLVMYNTTEEVD 392
Cdd:PLN02651 293 RYPGTLNLSFAYvEGESLLMGLkEVAVSSGSACTSAsLEPSYVLRALgvpeemahgsLRLGVGRFTTEEEVD 364
PRK14012 PRK14012
IscS subfamily cysteine desulfurase;
22-290 1.70e-20

IscS subfamily cysteine desulfurase;


Pssm-ID: 184450 [Multi-domain]  Cd Length: 404  Bit Score: 92.31  E-value: 1.70e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  22 LPLaYLDSAASAQKPNQVVDAEAEFYRHG--YAAVHRGIHTLSAEATQRMENVRTQLAAFLNArSPEELVFVRGTTEGIN 99
Cdd:PRK14012   3 LPI-YLDYSATTPVDPRVAEKMMPYLTMDgtFGNPASRSHRFGWQAEEAVDIARNQIADLIGA-DPREIVFTSGATESDN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 100 L----VANSWGNAqvhaGDNIIITQMEHHANIVPWQMLcERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSN 175
Cdd:PRK14012  81 LaikgAAHFYQKK----GKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNN 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 176 VLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYV-KEEILQAMPPWEGGGs 254
Cdd:PRK14012 156 EIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVrRKPRVRLEAQMHGGG- 234
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 544825110 255 miatvsltegttYARApwrFEAGTPNTGGIIGLGAA 290
Cdd:PRK14012 235 ------------HERG---MRSGTLPTHQIVGMGEA 255
PRK02948 PRK02948
IscS subfamily cysteine desulfurase;
26-401 9.30e-14

IscS subfamily cysteine desulfurase;


Pssm-ID: 179511 [Multi-domain]  Cd Length: 381  Bit Score: 72.07  E-value: 9.30e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  26 YLDSAASAQKPNQVVDAEAEFYRHgYAAVHRGIHTLSAEATQRMENVRTQLAAFLNARSpEELVFVRGTTEGINLVANSW 105
Cdd:PRK02948   3 YLDYAATTPMSKEALQTYQKAASQ-YFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEE-QGIYFTSGGTESNYLAIQSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 106 GNAQVHAGDNIIITQMEHHANIVPWQMLcERVGAQLRVIPLNADGTLQLEQLDLLLDDRTRLVAVTQVSNVLGTENPVAE 185
Cdd:PRK02948  81 LNALPQNKKHIITTPMEHASIHSYFQSL-ESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAE 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 186 IVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKEEIlqampPWEgggsmiatvSLTEGT 265
Cdd:PRK02948 160 IGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV-----RWK---------PVFPGT 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 266 TYARApwrFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYalaeLASVPDLTLygPADRQGVIAFNLgkhhAY 345
Cdd:PRK02948 226 THEKG---FRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYF----LEQIQTLPL--PIEVEGHSTSCL----PH 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 346 DVGSFLDNY------------GVAVRTGHHCAmplmAFYQVP--AM-------------CRASLVMYNTTEEVDRLVAGL 398
Cdd:PRK02948 293 IIGVTIKGIegqytmlecnrrGIAISTGSACQ----VGKQEPskTMlaigktyeeakqfVRFSFGQQTTKDQIDTTIHAL 368

                 ...
gi 544825110 399 KRI 401
Cdd:PRK02948 369 ETI 371
AAT_I cd01494
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ...
69-239 6.08e-10

Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).


Pssm-ID: 99742 [Multi-domain]  Cd Length: 170  Bit Score: 57.78  E-value: 6.08e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  69 MENVRTQLAAFLNArSPEELVFVRGTTEGINLVANSWGNAqvhaGDNIIITQMEHHANIvpWQMLcERVGAQLRVIPLNA 148
Cdd:cd01494    2 LEELEEKLARLLQP-GNDKAVFVPSGTGANEAALLALLGP----GDEVIVDANGHGSRY--WVAA-ELAGAKPVPVPVDD 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 149 DGTLQLEQLDLLLDDRTRLVA--VTQVSNVLGT-ENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALD---CDFYVF 222
Cdd:cd01494   74 AGYGGLDVAILEELKAKPNVAliVITPNTTSGGvLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPeggADVVTF 153
                        170
                 ....*....|....*..
gi 544825110 223 SGHKLYGPTGIGVLYVK 239
Cdd:cd01494  154 SLHKNLGGEGGGVVIVK 170
SepCysS cd06452
Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent ...
74-241 8.95e-09

Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.


Pssm-ID: 99745  Cd Length: 361  Bit Score: 56.63  E-value: 8.95e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  74 TQLAAFLNArspEELVFVRGTTEGINLVANSWgnaqVHAGDNIIITQMEHHANIVPwqmlCERVGAQLRVIP-------- 145
Cdd:cd06452   51 HDLAEFLGM---DEARVTPGAREGKFAVMHSL----CEKGDWVVVDGLAHYTSYVA----AERAGLNVREVPntghpeyh 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 146 LNADGTLQLEQLDLLLDDRTRLVA-VTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSG 224
Cdd:cd06452  120 ITPEGYAEVIEEVKDEFGKPPALAlLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSG 199
                        170
                 ....*....|....*...
gi 544825110 225 HKLYGPTG-IGVLYVKEE 241
Cdd:cd06452  200 HKSMAASApIGVLATTEE 217
PRK09331 PRK09331
Sep-tRNA:Cys-tRNA synthetase; Provisional
76-241 2.66e-08

Sep-tRNA:Cys-tRNA synthetase; Provisional


Pssm-ID: 236469  Cd Length: 387  Bit Score: 55.32  E-value: 2.66e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110  76 LAAFLNArspEELVFVRGTTEGINLVANSWGNAqvhaGDNIIITQMEHHANIVPwqmlCERVGAQLRVIP--------LN 147
Cdd:PRK09331  72 LAEFLGM---DEARVTHGAREGKFAVMHSLCKK----GDYVVLDGLAHYTSYVA----AERAGLNVREVPktgypeykIT 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 148 ADGTLQLEQLDLLLDDRTRLVA-VTQVSNVLGTENPVAEIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHK 226
Cdd:PRK09331 141 PEAYAEKIEEVKEETGKPPALAlLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHK 220
                        170
                 ....*....|....*.
gi 544825110 227 LYGPTG-IGVLYVKEE 241
Cdd:PRK09331 221 SMAASApSGVLATTEE 236
PLN02724 PLN02724
Molybdenum cofactor sulfurase
181-339 1.08e-04

Molybdenum cofactor sulfurase


Pssm-ID: 215384 [Multi-domain]  Cd Length: 805  Bit Score: 44.47  E-value: 1.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 181 NPVAEIVDKAHQAGAK-----VLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYG-PTGIGVLYVKEEILQAM-PPWEGGG 253
Cdd:PLN02724 212 DLVKLIKDNQHSNFSKsgrwmVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGyPTGLGALLVRRDAAKLLkKKYFGGG 291
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825110 254 SMIATVSLTEGTT-YARAPWRFEAGTPNTGGIIGLGAAVSYVSAIGLDAIQEYEQLLMHYALAELAS------VPDLTLY 326
Cdd:PLN02724 292 TVAASIADIDFVKrRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNlkhgngAPVCVLY 371
                        170       180
                 ....*....|....*....|
gi 544825110 327 GPAD------RQG-VIAFNL 339
Cdd:PLN02724 372 GNHTfklefhIQGpIVTFNL 391
AdSS cd03108
adenylosuccinate synthetase; Adenylosuccinate synthetase (AdSS) catalyzes the first step in ...
183-235 3.37e-03

adenylosuccinate synthetase; Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP. IMP and L-aspartate are conjugated in a two-step reaction accompanied by the hydrolysis of GTP to GDP in the presence of Mg2+. In the first step, the r-phosphate group of GTP is transferred to the 6-oxygen atom of IMP. An aspartate then displaces this 6-phosphate group to form the product adenylosuccinate. Because of its critical role in purine biosynthesis, AdSS is a target of antibiotics, herbicides and antitumor drugs.


Pssm-ID: 349762  Cd Length: 316  Bit Score: 39.02  E-value: 3.37e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 544825110 183 VAEIVDKAHQAGAKVLIDGAQAVMhhavdvqaLDCDF----YVFSGHKL--YGPTGIGV 235
Cdd:cd03108  155 TVELLNEALKAGKKVLFEGAQGTL--------LDIDFgtypYVTSSNTTagGVCTGLGI 205
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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