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Conserved domains on  [gi|520792163|ref|WP_020291864|]
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potassium/proton antiporter [Pseudomonas sp. CFII64]

Protein Classification

potassium/proton antiporter( domain architecture ID 11480727)

potassium/proton antiporter extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels

CATH:  3.30.70.1450
PubMed:  9537504
TCDB:  2.A.36

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05326 PRK05326
potassium/proton antiporter;
5-568 0e+00

potassium/proton antiporter;


:

Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 753.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   5 TINSVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDG-GGIIFDNYATAYLVGNLALAVILLDGGLRTRVSS 83
Cdd:PRK05326   3 TINSLLLIGALLLLLSILASRLSSRLGIPSLLLFLAIGMLAGEDGlGGIQFDNYPLAYLVGNLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  84 FRVALWPALSLATVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTASLEIESGSND 161
Cdd:PRK05326  83 FRPALGPALSLATLGVLITAGLTGLFAHWLLGLDWLEGLLLGAIVGSTDAAAVFSLLRGKGlnLKERVASTLEIESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 162 PMAVFLTVTLIGMLASGQTSLEWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINL-ANGLYPILVIAGGLAVFALTNAI 240
Cdd:PRK05326 163 PMAVFLTITLIELITGGETGLSWGFLLLFLQQFGLGALIGLLGGWLLVQLLNRIALpAEGLYPILVLAGALLIFALTAAL 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 241 HGSGFLAVYLCGLVMGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVG 320
Cdd:PRK05326 243 GGSGFLAVYLAGLVLGNRPIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDIALPALLLALFLILVARPLAVFLS 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 321 LLPFKaFHGREKAFIAWVGLRGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLLLQGTSLPWMAKLLKVTVPPEPAPI 400
Cdd:PRK05326 323 LLPFR-FNLREKLFISWVGLRGAVPIVLATFPMMAGLPNAQLIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPEARPV 401
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 401 SRAPLEVHPTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGK 480
Cdd:PRK05326 402 SRVELDPLEESDAELLEYRVPAGSWLVGKALRDLRLPRGALIALIIRDGKLLVPTGSTRLKAGDVLLVLGPERDLPALER 481
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 481 LFSQAPQRGLDLRFFGDFVLEGDAQLGAVAALYGLKLDgldsNMPLSKFIVQKNRGEPVVGDQIEWNGTIWTVAVmegNK 560
Cdd:PRK05326 482 LFSQSPPGKLDQRFFGDFILEGDAKLADLALIYGLELD----QQTLGELIKQRLGGAPVVGDQVELGGIILTVAE---GR 554

                 ....*...
gi 520792163 561 ILKVGVRF 568
Cdd:PRK05326 555 VTKVGLRL 562
 
Name Accession Description Interval E-value
PRK05326 PRK05326
potassium/proton antiporter;
5-568 0e+00

potassium/proton antiporter;


Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 753.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   5 TINSVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDG-GGIIFDNYATAYLVGNLALAVILLDGGLRTRVSS 83
Cdd:PRK05326   3 TINSLLLIGALLLLLSILASRLSSRLGIPSLLLFLAIGMLAGEDGlGGIQFDNYPLAYLVGNLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  84 FRVALWPALSLATVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTASLEIESGSND 161
Cdd:PRK05326  83 FRPALGPALSLATLGVLITAGLTGLFAHWLLGLDWLEGLLLGAIVGSTDAAAVFSLLRGKGlnLKERVASTLEIESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 162 PMAVFLTVTLIGMLASGQTSLEWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINL-ANGLYPILVIAGGLAVFALTNAI 240
Cdd:PRK05326 163 PMAVFLTITLIELITGGETGLSWGFLLLFLQQFGLGALIGLLGGWLLVQLLNRIALpAEGLYPILVLAGALLIFALTAAL 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 241 HGSGFLAVYLCGLVMGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVG 320
Cdd:PRK05326 243 GGSGFLAVYLAGLVLGNRPIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDIALPALLLALFLILVARPLAVFLS 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 321 LLPFKaFHGREKAFIAWVGLRGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLLLQGTSLPWMAKLLKVTVPPEPAPI 400
Cdd:PRK05326 323 LLPFR-FNLREKLFISWVGLRGAVPIVLATFPMMAGLPNAQLIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPEARPV 401
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 401 SRAPLEVHPTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGK 480
Cdd:PRK05326 402 SRVELDPLEESDAELLEYRVPAGSWLVGKALRDLRLPRGALIALIIRDGKLLVPTGSTRLKAGDVLLVLGPERDLPALER 481
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 481 LFSQAPQRGLDLRFFGDFVLEGDAQLGAVAALYGLKLDgldsNMPLSKFIVQKNRGEPVVGDQIEWNGTIWTVAVmegNK 560
Cdd:PRK05326 482 LFSQSPPGKLDQRFFGDFILEGDAKLADLALIYGLELD----QQTLGELIKQRLGGAPVVGDQVELGGIILTVAE---GR 554

                 ....*...
gi 520792163 561 ILKVGVRF 568
Cdd:PRK05326 555 VTKVGLRL 562
NhaP2 COG3263
NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy ...
5-502 0e+00

NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 442494 [Multi-domain]  Cd Length: 502  Bit Score: 654.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   5 TINSVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDG-GGIIFDNYATAYLVGNLALAVILLDGGLRTRVSS 83
Cdd:COG3263    3 TLNLILLIGALLLLLSILASKLSSRLGVPLLLLFLGIGMLAGEDGlGGIQFDDAELAQLIGSLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  84 FRVALWPALSLATVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTASLEIESGSND 161
Cdd:COG3263   83 FRPVLAPALSLATLGVLLTAGLTGVFAHWLLGLSWLEGLLLGAIVSSTDAAAVFSILRSKGlnLKERLASTLELESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 162 PMAVFLTVTLIGMLASGQTSLeWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINL-ANGLYPILVIAGGLAVFALTNAI 240
Cdd:COG3263  163 PMAVFLTIALIELITGGGASG-WSLLLLFVLQMGLGALVGLAGGWLGVWLLNRIRLpAEGLYPVLVLALALLAFGATALL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 241 HGSGFLAVYLCGLVMGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVG 320
Cdd:COG3263  242 GGSGFLAVYLAGLVLGNRRLPHKKSILRFHDGLAWLAQIGMFLMLGLLVFPSRLLPVALPALLIALFLIFVARPLAVFLS 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 321 LLPFKaFHGREKAFIAWVGLRGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLLLQGTSLPWMAKLLKVTVPPEPAPI 400
Cdd:COG3263  322 LLPFR-FSWREKLFISWVGLRGAVPIVLATFPLLAGLPGAQLIFNVVFFVVLVSLLVQGTTLPPVARKLGLEVPPEPKPL 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 401 SRAPLEVHPTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGK 480
Cdd:COG3263  401 TRVELELLEELDAELVEYRVPPGSPAVGKTLRELRLPEGALVVLIVRDGELLVPRGSTRLQAGDQLLVLAPPEDLEALER 480
                        490       500
                 ....*....|....*....|..
gi 520792163 481 LFSQAPQRGLDLRFFGDFVLEG 502
Cdd:COG3263  481 LFAAVSRAGTLAEWFGDRVRLG 502
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
15-387 7.15e-40

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 149.33  E-value: 7.15e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   15 LLVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIFDNYATAYLVGNLALAVILLDGGLRTRVSSFRVALWPALSL 94
Cdd:pfam00999   3 LLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLGLISEVDEDLEVLSNLGLPPLLFLAGLELDLRELRKNGGSILLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   95 ATVGVLITTGLTGMMAAWL-FNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG-LNERVTASLEIESGSNDPMAVFLTVTLI 172
Cdd:pfam00999  83 ALLGVLIPFVLIGLLLYLLgLGIPLLEALLFGAILSATSPVVVLAILKELGrVPERLGTLLLGESVLNDGVAVVLLAVLL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  173 GMLASGQTSLEWSLLTHLLREFGIGGIIGLGGGWLMLQLVNR-INLANGLYPILVIAGGLAVFALTNAIHGSGFLAVYLC 251
Cdd:pfam00999 163 ALAQGVGGGSDLGWLLLIFLVVAVGGLLLGLLIGWLLRLITRfTDDDRELEVLLVLLLALLAALLAEALGVSGILGAFLA 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  252 GLVMGNRPIrsRHGILHMLDG-MAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVgLLPFKAFHGR 330
Cdd:pfam00999 243 GLVLSEYPF--ANKLSEKLEPfGYGLFNPLFFVLVGLSLDLSSLLLSVWILVLLALVAILLGRFLGVFL-LLRLLGLSLR 319
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 520792163  331 EKAFIAWVGL-RGAVPIILAVFPLMANLPNAQLYFnLAFFIVLVSLLLQGTSLPWMAK 387
Cdd:pfam00999 320 EALIIGFGGLqRGAVSLALAAIGPLLGIIARELYP-LLIVVVLFTVLVQGITLKPLLF 376
a_cpa1 TIGR00831
Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC ...
16-391 1.38e-14

Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129911 [Multi-domain]  Cd Length: 525  Bit Score: 76.46  E-value: 1.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   16 LVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIifDNYATAYLVGNLALAVILLDGGLRTRVSSFRVALWPALSLA 95
Cdd:TIGR00831   6 LVMLATAVAVTVKFIRLPYPIALILAGLLLGLAGLLP--EVPLDREIVLFLFLPPLLFEAAMNTDLRELRENFRPIALIA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   96 TVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSNDPMA-VFLTVTLIGM 174
Cdd:TIGR00831  84 FLLVVVTTVVVGFSLNWILGIPLALALILGAVLSPTDAVAVLGTFKSIRAPKKLSILLEGESLLNDGAAlVVFAIAVAVA 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  175 LASGQTSLewsllTHLLREFGIGGIIGLGGGWLMLQLVNRINLANGLYPI----LVIAGGLAVFALTNAIHGSGFLAVYL 250
Cdd:TIGR00831 164 LGKGVFDP-----LNAALDFAVVCVGGIAAGLAVGYLAYRLLRAKIDDPLveiaLTILAPFAGFLLAERFHFSGVIAVVA 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  251 CGLVMGNR------PIRSRHGILHMLDGMAWLAQIGMFLVLGLLV-------TPHDLLPIAVPALGLALWMILVA----- 312
Cdd:TIGR00831 239 AGLILTNYgrdfsmSPTTRLIALDFWSVIVFLVNGIIFILIGVQTpgtifsaWKEILVAPAAVILALFTNAFVIYpvmty 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  313 -------RPLSVMVGLLPFKAFHGREKAFIAWVGLRGAVPIILAV-FPLMAN----LPNAQLYFNLAFFIVLVSLLLQGT 380
Cdd:TIGR00831 319 vrflwtmKPFSNRFLKKKPMEFGTRWKHVVSWAGLRGAIPLALALsFPNQLLsgmaFPARYELVFLAAGVILFSLLVQGI 398
                         410
                  ....*....|.
gi 520792163  381 SLPWMAKLLKV 391
Cdd:TIGR00831 399 SLPIFVKRKFV 409
CorC_HlyC smart01091
Transporter associated domain; This small domain is found in a family of proteins with the ...
493-569 1.56e-11

Transporter associated domain; This small domain is found in a family of proteins with the DUF21 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.


Pssm-ID: 215020 [Multi-domain]  Cd Length: 78  Bit Score: 60.15  E-value: 1.56e-11
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 520792163   493 RFFGDFVLEGDAQLGAVAALYGLKL--DGLDSnmpLSKFIVQKNRGEPVVGDQIEWNGTIWTVAVMEGNKILKVGVRFP 569
Cdd:smart01091   3 LDDGSYLVDGRTPIDDLNELLGLDLpeEEYDT---LGGLVLEELGRIPEVGDSVEIGGLRFEVLEVDGRRIDKVRVTRP 78
 
Name Accession Description Interval E-value
PRK05326 PRK05326
potassium/proton antiporter;
5-568 0e+00

potassium/proton antiporter;


Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 753.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   5 TINSVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDG-GGIIFDNYATAYLVGNLALAVILLDGGLRTRVSS 83
Cdd:PRK05326   3 TINSLLLIGALLLLLSILASRLSSRLGIPSLLLFLAIGMLAGEDGlGGIQFDNYPLAYLVGNLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  84 FRVALWPALSLATVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTASLEIESGSND 161
Cdd:PRK05326  83 FRPALGPALSLATLGVLITAGLTGLFAHWLLGLDWLEGLLLGAIVGSTDAAAVFSLLRGKGlnLKERVASTLEIESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 162 PMAVFLTVTLIGMLASGQTSLEWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINL-ANGLYPILVIAGGLAVFALTNAI 240
Cdd:PRK05326 163 PMAVFLTITLIELITGGETGLSWGFLLLFLQQFGLGALIGLLGGWLLVQLLNRIALpAEGLYPILVLAGALLIFALTAAL 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 241 HGSGFLAVYLCGLVMGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVG 320
Cdd:PRK05326 243 GGSGFLAVYLAGLVLGNRPIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDIALPALLLALFLILVARPLAVFLS 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 321 LLPFKaFHGREKAFIAWVGLRGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLLLQGTSLPWMAKLLKVTVPPEPAPI 400
Cdd:PRK05326 323 LLPFR-FNLREKLFISWVGLRGAVPIVLATFPMMAGLPNAQLIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPEARPV 401
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 401 SRAPLEVHPTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGK 480
Cdd:PRK05326 402 SRVELDPLEESDAELLEYRVPAGSWLVGKALRDLRLPRGALIALIIRDGKLLVPTGSTRLKAGDVLLVLGPERDLPALER 481
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 481 LFSQAPQRGLDLRFFGDFVLEGDAQLGAVAALYGLKLDgldsNMPLSKFIVQKNRGEPVVGDQIEWNGTIWTVAVmegNK 560
Cdd:PRK05326 482 LFSQSPPGKLDQRFFGDFILEGDAKLADLALIYGLELD----QQTLGELIKQRLGGAPVVGDQVELGGIILTVAE---GR 554

                 ....*...
gi 520792163 561 ILKVGVRF 568
Cdd:PRK05326 555 VTKVGLRL 562
NhaP2 COG3263
NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy ...
5-502 0e+00

NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 442494 [Multi-domain]  Cd Length: 502  Bit Score: 654.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   5 TINSVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDG-GGIIFDNYATAYLVGNLALAVILLDGGLRTRVSS 83
Cdd:COG3263    3 TLNLILLIGALLLLLSILASKLSSRLGVPLLLLFLGIGMLAGEDGlGGIQFDDAELAQLIGSLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  84 FRVALWPALSLATVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTASLEIESGSND 161
Cdd:COG3263   83 FRPVLAPALSLATLGVLLTAGLTGVFAHWLLGLSWLEGLLLGAIVSSTDAAAVFSILRSKGlnLKERLASTLELESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 162 PMAVFLTVTLIGMLASGQTSLeWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINL-ANGLYPILVIAGGLAVFALTNAI 240
Cdd:COG3263  163 PMAVFLTIALIELITGGGASG-WSLLLLFVLQMGLGALVGLAGGWLGVWLLNRIRLpAEGLYPVLVLALALLAFGATALL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 241 HGSGFLAVYLCGLVMGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVG 320
Cdd:COG3263  242 GGSGFLAVYLAGLVLGNRRLPHKKSILRFHDGLAWLAQIGMFLMLGLLVFPSRLLPVALPALLIALFLIFVARPLAVFLS 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 321 LLPFKaFHGREKAFIAWVGLRGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLLLQGTSLPWMAKLLKVTVPPEPAPI 400
Cdd:COG3263  322 LLPFR-FSWREKLFISWVGLRGAVPIVLATFPLLAGLPGAQLIFNVVFFVVLVSLLVQGTTLPPVARKLGLEVPPEPKPL 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 401 SRAPLEVHPTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGK 480
Cdd:COG3263  401 TRVELELLEELDAELVEYRVPPGSPAVGKTLRELRLPEGALVVLIVRDGELLVPRGSTRLQAGDQLLVLAPPEDLEALER 480
                        490       500
                 ....*....|....*....|..
gi 520792163 481 LFSQAPQRGLDLRFFGDFVLEG 502
Cdd:COG3263  481 LFAAVSRAGTLAEWFGDRVRLG 502
NhaP COG0025
NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];
8-405 1.10e-63

NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 439796 [Multi-domain]  Cd Length: 506  Bit Score: 217.14  E-value: 1.10e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   8 SVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIFDNYATAYLVGNLALAVILLDGGLRTRVSSFRVA 87
Cdd:COG0025    2 ELLLLILLLLLLGLLSQWLARRLKLPAPLLLLLAGILLGPGLGLELDPELGDLEPLLELFLPPLLFEAALNLDLRELRRN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  88 LWPALSLATVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSNDPMAVFL 167
Cdd:COG0025   82 GRPILRLAVVGVLLTTLAVALAAHWLLGLPLAAALLLGAILAPTDPVAVSPILRRLGVPKRLRTILEGESLLNDATALVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 168 TVTLIGMLASGQTSLeWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINlANGLYPILVIAGGLAVFALTNAIHGSGFLA 247
Cdd:COG0025  162 FVLALAAALGGGFSL-GEALLDFLLAILGGILVGLLLGWLLGRLLRRLP-DPLLEILLTLALPFLAYLLAEALHGSGVLA 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 248 VYLCGLVMGNR-----PIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVGL- 321
Cdd:COG0025  240 VVVAGLVLGNAgrrslSPETRLQLLEFWETLEFLLNSLLFVLLGAQLPLILLGALGLGGILLVLLALLVVRPLWVFLSLa 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 322 LPFKAFHGREKAFIAWVGLRGAVPIILAVFPLM---ANLPNAQLYFNLAFFIVLVSLLLQGTSLPWMAKLLKVTVPPEPA 398
Cdd:COG0025  320 LRGSRLSWRERLFLSWGGPRGIVSLALALSLPLhggAGFPGRDLILALAFGVILLTLVLQGLTLPPLARRLGLREDEPEG 399

                 ....*..
gi 520792163 399 PISRAPL 405
Cdd:COG0025  400 EELEAAL 406
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
15-387 7.15e-40

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 149.33  E-value: 7.15e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   15 LLVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIFDNYATAYLVGNLALAVILLDGGLRTRVSSFRVALWPALSL 94
Cdd:pfam00999   3 LLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLGLISEVDEDLEVLSNLGLPPLLFLAGLELDLRELRKNGGSILLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   95 ATVGVLITTGLTGMMAAWL-FNLNMIQGLLIGAIVGSTDAAAVFSLLGGKG-LNERVTASLEIESGSNDPMAVFLTVTLI 172
Cdd:pfam00999  83 ALLGVLIPFVLIGLLLYLLgLGIPLLEALLFGAILSATSPVVVLAILKELGrVPERLGTLLLGESVLNDGVAVVLLAVLL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  173 GMLASGQTSLEWSLLTHLLREFGIGGIIGLGGGWLMLQLVNR-INLANGLYPILVIAGGLAVFALTNAIHGSGFLAVYLC 251
Cdd:pfam00999 163 ALAQGVGGGSDLGWLLLIFLVVAVGGLLLGLLIGWLLRLITRfTDDDRELEVLLVLLLALLAALLAEALGVSGILGAFLA 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  252 GLVMGNRPIrsRHGILHMLDG-MAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMILVARPLSVMVgLLPFKAFHGR 330
Cdd:pfam00999 243 GLVLSEYPF--ANKLSEKLEPfGYGLFNPLFFVLVGLSLDLSSLLLSVWILVLLALVAILLGRFLGVFL-LLRLLGLSLR 319
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 520792163  331 EKAFIAWVGL-RGAVPIILAVFPLMANLPNAQLYFnLAFFIVLVSLLLQGTSLPWMAK 387
Cdd:pfam00999 320 EALIIGFGGLqRGAVSLALAAIGPLLGIIARELYP-LLIVVVLFTVLVQGITLKPLLF 376
KefB COG0475
Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism]; ...
8-376 1.35e-16

Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism];


Pssm-ID: 440243 [Multi-domain]  Cd Length: 384  Bit Score: 81.73  E-value: 1.35e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   8 SVFLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIFDNyATAYLVGNLALAVILLDGGLRTRVSSFRVA 87
Cdd:COG0475    4 SLLLQLGLLLLAAVLAGLLARRLGLPSVLGYILAGILLGPSGLGLIEDS-EALELLAELGVVLLLFLIGLELDLKRLRKM 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  88 LWPALSLATVGVLITTGLtGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSNDPMAVFL 167
Cdd:COG0475   83 GRRALGIGLLQVLLPFLL-GFLLALLLGLSLAAALFLGAALAATSTAIVLKVLKELGLLKTPLGQLILGVALFDDIAAIL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 168 TVTLIGMLASGqTSLEWSLLTHLLREFGIGGIIGLGGGWLMLQLVNRINLAN--GLYPILVIAGGLAVFALTNAIHGSGF 245
Cdd:COG0475  162 LLALVPALAGG-GSVAGSLLLALLKALLFLALLLLVGRYLLRRLFRLVARTRsrELFLLFALLLVLLAAALAELLGLSAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 246 LAVYLCGLVMGNRPirSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIAVPALGLALWMIlVARPLSVMVGLLPFK 325
Cdd:COG0475  241 LGAFLAGLVLAESE--YRHELEEKIEPFGDLFLPLFFVSVGLSLDLSALLSNPLLALLLVLAAI-VGKLLGAYLAARLFG 317
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 520792163 326 AfhGREKAFIAWVGL--RGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLL 376
Cdd:COG0475  318 L--SRREALRIGLLLapRGEFALVLASLGLSAGLISPELFAALVLVVLLTTLL 368
a_cpa1 TIGR00831
Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC ...
16-391 1.38e-14

Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129911 [Multi-domain]  Cd Length: 525  Bit Score: 76.46  E-value: 1.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   16 LVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIifDNYATAYLVGNLALAVILLDGGLRTRVSSFRVALWPALSLA 95
Cdd:TIGR00831   6 LVMLATAVAVTVKFIRLPYPIALILAGLLLGLAGLLP--EVPLDREIVLFLFLPPLLFEAAMNTDLRELRENFRPIALIA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   96 TVGVLITTGLTGMMAAWLFNLNMIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSNDPMA-VFLTVTLIGM 174
Cdd:TIGR00831  84 FLLVVVTTVVVGFSLNWILGIPLALALILGAVLSPTDAVAVLGTFKSIRAPKKLSILLEGESLLNDGAAlVVFAIAVAVA 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  175 LASGQTSLewsllTHLLREFGIGGIIGLGGGWLMLQLVNRINLANGLYPI----LVIAGGLAVFALTNAIHGSGFLAVYL 250
Cdd:TIGR00831 164 LGKGVFDP-----LNAALDFAVVCVGGIAAGLAVGYLAYRLLRAKIDDPLveiaLTILAPFAGFLLAERFHFSGVIAVVA 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  251 CGLVMGNR------PIRSRHGILHMLDGMAWLAQIGMFLVLGLLV-------TPHDLLPIAVPALGLALWMILVA----- 312
Cdd:TIGR00831 239 AGLILTNYgrdfsmSPTTRLIALDFWSVIVFLVNGIIFILIGVQTpgtifsaWKEILVAPAAVILALFTNAFVIYpvmty 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  313 -------RPLSVMVGLLPFKAFHGREKAFIAWVGLRGAVPIILAV-FPLMAN----LPNAQLYFNLAFFIVLVSLLLQGT 380
Cdd:TIGR00831 319 vrflwtmKPFSNRFLKKKPMEFGTRWKHVVSWAGLRGAIPLALALsFPNQLLsgmaFPARYELVFLAAGVILFSLLVQGI 398
                         410
                  ....*....|.
gi 520792163  381 SLPWMAKLLKV 391
Cdd:TIGR00831 399 SLPIFVKRKFV 409
CorC_HlyC smart01091
Transporter associated domain; This small domain is found in a family of proteins with the ...
493-569 1.56e-11

Transporter associated domain; This small domain is found in a family of proteins with the DUF21 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.


Pssm-ID: 215020 [Multi-domain]  Cd Length: 78  Bit Score: 60.15  E-value: 1.56e-11
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 520792163   493 RFFGDFVLEGDAQLGAVAALYGLKL--DGLDSnmpLSKFIVQKNRGEPVVGDQIEWNGTIWTVAVMEGNKILKVGVRFP 569
Cdd:smart01091   3 LDDGSYLVDGRTPIDDLNELLGLDLpeEEYDT---LGGLVLEELGRIPEVGDSVEIGGLRFEVLEVDGRRIDKVRVTRP 78
TrkA_C pfam02080
TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of ...
415-482 1.95e-10

TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand. The domain is predicted to adopt an all beta structure.


Pssm-ID: 460440 [Multi-domain]  Cd Length: 70  Bit Score: 56.85  E-value: 1.95e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  415 LFVYRLGAEKWCIGAALRELKMPE--GTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGKLF 482
Cdd:pfam02080   1 LVEVTVPENSPLVGKTLKELNLPErfGVRIVAIRRGGRLIIPSGDTVLEAGDRLLVIGTPDDLAALRELL 70
b_cpa1 TIGR00840
sodium/hydrogen exchanger 3; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A. ...
10-391 2.03e-09

sodium/hydrogen exchanger 3; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36)The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals.Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in(1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles.This model is specific for the eukaryotic members members of this family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273294 [Multi-domain]  Cd Length: 559  Bit Score: 60.18  E-value: 2.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   10 FLIGALLVGASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIF--DNYATAYLVG----NLALAVILLDGGLRTRVSS 83
Cdd:TIGR00840   9 YEFILWILLASLAKIGFHLTHKVIRAVPESVLLIVYGLLVGGIIKasPHIDPPTLDSsyffLYLLPPIVLDAGYFMPQRN 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163   84 FRVALWPALSLATVGVLITTGLTG--MMAAWLF------NLNMIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEI 155
Cdd:TIGR00840  89 FFENLGSILIFAVVGTLINAFVIGlsLYGICLIggfgsiDIGLLDNLLFGSLISAVDPVAVLAVFEEYHVNEKLYIIIFG 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  156 ESGSNDPMAVFLTVTLIGMLASGQTSLEW-SLLTHLLREFGIG-------GIIGLGGGWLMLQLVNRinlaNGLYPILVI 227
Cdd:TIGR00840 169 ESLLNDAVTVVLYNTFIKFHKTADEPVTIvDVFEGCASFFVVTcggllvgVVFGFLVAFITRFTHHI----RQIEPLFVF 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  228 AGGLAVFALTNAIHGSGFLAVYLCGLVM-----GNRPIRSRHGILHMLDGMAWLAQIGMFLVLGL-LVTPHDLLPIAVPA 301
Cdd:TIGR00840 245 LISYLSYLFAETLHLSGILALIFCGITMkkyveANMSRRSQTTIKYFMKMLSSLSETLIFIFLGVsLVTENHEWNWAFVV 324
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  302 LGLA---LWMILVARPLSVMVGLLPFKAFHGREKAFIAWVGLRGAVPIILAVFPLMANLPNAQLYFNLAFFIVLVSLLLQ 378
Cdd:TIGR00840 325 ATLSfcvIYRVLGVRTLSWITNEFRPVEIPYKDQLVIFYAGLRGAVAFALALLLDEKIFPYKFLFVTTTLVVVFFTVIFQ 404
                         410
                  ....*....|...
gi 520792163  379 GTSLPWMAKLLKV 391
Cdd:TIGR00840 405 GGTIKPLVEVLKV 417
CorC_HlyC pfam03471
Transporter associated domain; This small domain is found in a family of proteins with the ...
493-570 9.10e-08

Transporter associated domain; This small domain is found in a family of proteins with the pfam01595 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.


Pssm-ID: 460935 [Multi-domain]  Cd Length: 81  Bit Score: 49.47  E-value: 9.10e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  493 RFFGDFVLEGDAQLGAVAALYGLKLDGLDSNMpLSKFIVQKNRGEPVVGDQ--IEWNGTIWTVAVMEGNKILKVGVRFPE 570
Cdd:pfam03471   3 LDDGSYLVDGRAPLDDLNELLGLELPEEDYDT-LGGLVLERLGRIPKVGDKveVELGGLRFTVLEMDGRRIKKVRITKLE 81
trkA PRK09496
Trk system potassium transporter TrkA;
427-482 2.38e-05

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 47.04  E-value: 2.38e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 520792163 427 IGAALRELKM---PEGTRIAALFRSQQLLHPSGSTTLEVDDLLCVIGHEHNLAALGKLF 482
Cdd:PRK09496 166 VGKPLSDLREhfpDIDVRVVAIFRGGRLIIPRGDTVIEAGDEVYFIGAREHIRAVMSEF 224
trkA PRK09496
Trk system potassium transporter TrkA;
405-464 6.02e-04

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 42.42  E-value: 6.02e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 405 LEVHPTSEwelfvyrlgaekwCIGAALRELKMPEGTRIAALFRSQQLLHPSGSTTLEVDD 464
Cdd:PRK09496 383 AVAHETSK-------------VVGKPLKDLKLPKGVLIGAIVRGGEVIIPTGDTVIEPGD 429
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
412-466 2.40e-03

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 40.05  E-value: 2.40e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 520792163 412 EWELFVYRLGAEKWCIGAALRELKMPE--GTRIAALFRSQQLLHPSGSTTLEVDDLL 466
Cdd:COG0569  239 DAEIVEVTVPEGSPLVGKTLKELDLREryGVTVVAIKRGGEVIIPSGDTVLEAGDEL 295
TlyC COG1253
Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction ...
496-576 4.74e-03

Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only];


Pssm-ID: 440865 [Multi-domain]  Cd Length: 435  Bit Score: 39.72  E-value: 4.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163 496 GDFVLEGDAQLGAVAALYGLKLDGLDSNMPLSKFIVQKNRGEPVVGDQIEWNGTIWTVAVMEGNKILKVGVRFPEGSRPG 575
Cdd:COG1253  355 GSYLVDGRLPIDELNELLGLDLPEEEDYETLGGLVLEQLGRIPEVGETVEVDGLRFEVLDMDGRRIDKVLVTRLPEEEEE 434

                 .
gi 520792163 576 P 576
Cdd:COG1253  435 E 435
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
10-181 7.83e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 39.12  E-value: 7.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  10 FLIGALLVGASILVSSLSSRLGIPILVIILAVGMvagvdgggIIFDNYATAYLVGNLAL-AVILLDGGLRTRVSSFRVAL 88
Cdd:COG2211   84 ILIGAIPLALSFVLLFTAPDLSPTGKLIYALVTY--------LLLGLAYTLVNIPYSALgAELTPDYEERTRLSSWRFAF 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 520792163  89 wpalslATVGVLITTGLTGMMAAWlFNLNMIQGLLIGAIVGSTdAAAVFSLLGGKGLNERVTASLEIES--------GSN 160
Cdd:COG2211  156 ------AGLGGLLASVLPPPLVAA-FGGDAALGYRLTALIFAV-LGLLAFLLTFFGTKERPVPEEEKVSlkeslkalLKN 227
                        170       180
                 ....*....|....*....|.
gi 520792163 161 DPMAVFLTVTLIGMLASGQTS 181
Cdd:COG2211  228 RPFLLLLLAYLLFFLALALVA 248
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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