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Conserved domains on  [gi|519054651|ref|WP_020210526|]
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Grx4 family monothiol glutaredoxin [Gilvimarinus chinensis]

Protein Classification

glutaredoxin family protein( domain architecture ID 10000959)

glutaredoxin (GRX) family protein belonging to the thioredoxin superfamily, may function as a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins using an active site dithiol, present in a CXXC motif

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GrxD COG0278
Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones];
1-103 2.88e-71

Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 440047  Cd Length: 105  Bit Score: 207.28  E-value: 2.88e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   1 MDVMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:COG0278    2 MDVQERIKQQIKSNPVVLFMKGTPQFPQCGFSARAVQILNACGVDFATVNVLEDPEIRQGLKEYSNWPTIPQLYVKGEFI 81
                         90       100
                 ....*....|....*....|...
gi 519054651  81 GGCDIVTEMYENGELKTLIESAA 103
Cdd:COG0278   82 GGCDIIREMYESGELQKLLEEAG 104
 
Name Accession Description Interval E-value
GrxD COG0278
Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones];
1-103 2.88e-71

Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440047  Cd Length: 105  Bit Score: 207.28  E-value: 2.88e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   1 MDVMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:COG0278    2 MDVQERIKQQIKSNPVVLFMKGTPQFPQCGFSARAVQILNACGVDFATVNVLEDPEIRQGLKEYSNWPTIPQLYVKGEFI 81
                         90       100
                 ....*....|....*....|...
gi 519054651  81 GGCDIVTEMYENGELKTLIESAA 103
Cdd:COG0278   82 GGCDIIREMYESGELQKLLEEAG 104
TIGR00365 TIGR00365
monothiol glutaredoxin, Grx4 family; The gene for the member of this glutaredoxin family in E. ...
3-99 5.90e-67

monothiol glutaredoxin, Grx4 family; The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport]


Pssm-ID: 188046  Cd Length: 97  Bit Score: 196.15  E-value: 5.90e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651    3 VMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGG 82
Cdd:TIGR00365   1 TIERIKEQIAENPVVLYMKGTPQFPQCGFSARAVQILNACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGG 80
                          90
                  ....*....|....*..
gi 519054651   83 CDIVTEMYENGELKTLI 99
Cdd:TIGR00365  81 CDIIMEMYQSGELQTLL 97
PRK10824 PRK10824
Grx4 family monothiol glutaredoxin;
1-109 4.90e-56

Grx4 family monothiol glutaredoxin;


Pssm-ID: 182759  Cd Length: 115  Bit Score: 169.31  E-value: 4.90e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   1 MDVMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:PRK10824   2 STTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELV 81
                         90       100
                 ....*....|....*....|....*....
gi 519054651  81 GGCDIVTEMYENGELKTLIESAASEDSSD 109
Cdd:PRK10824  82 GGCDIVIEMYQRGELQQLIKETAAKYKSE 110
GRX_PICOT_like cd03028
Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of ...
7-96 5.58e-56

Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein in Arabidopsis thaliana, and PfGLP-1, a GRX-like protein from Plasmodium falciparum.


Pssm-ID: 239326  Cd Length: 90  Bit Score: 168.06  E-value: 5.58e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   7 IKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGGCDIV 86
Cdd:cd03028    1 IKKLIKENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIV 80
                         90
                 ....*....|
gi 519054651  87 TEMYENGELK 96
Cdd:cd03028   81 KEMHESGELQ 90
Glutaredoxin pfam00462
Glutaredoxin;
16-80 1.33e-20

Glutaredoxin;


Pssm-ID: 425695 [Multi-domain]  Cd Length: 60  Bit Score: 77.93  E-value: 1.33e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 519054651   16 VILYMKgspnaPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:pfam00462   1 VVLYTK-----PTCPFCKRAKRLLKSLGVDFEEIDVDEDPEIREELKELSGWPTVPQVFIDGEHI 60
 
Name Accession Description Interval E-value
GrxD COG0278
Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones];
1-103 2.88e-71

Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440047  Cd Length: 105  Bit Score: 207.28  E-value: 2.88e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   1 MDVMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:COG0278    2 MDVQERIKQQIKSNPVVLFMKGTPQFPQCGFSARAVQILNACGVDFATVNVLEDPEIRQGLKEYSNWPTIPQLYVKGEFI 81
                         90       100
                 ....*....|....*....|...
gi 519054651  81 GGCDIVTEMYENGELKTLIESAA 103
Cdd:COG0278   82 GGCDIIREMYESGELQKLLEEAG 104
TIGR00365 TIGR00365
monothiol glutaredoxin, Grx4 family; The gene for the member of this glutaredoxin family in E. ...
3-99 5.90e-67

monothiol glutaredoxin, Grx4 family; The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport]


Pssm-ID: 188046  Cd Length: 97  Bit Score: 196.15  E-value: 5.90e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651    3 VMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGG 82
Cdd:TIGR00365   1 TIERIKEQIAENPVVLYMKGTPQFPQCGFSARAVQILNACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGG 80
                          90
                  ....*....|....*..
gi 519054651   83 CDIVTEMYENGELKTLI 99
Cdd:TIGR00365  81 CDIIMEMYQSGELQTLL 97
PRK10824 PRK10824
Grx4 family monothiol glutaredoxin;
1-109 4.90e-56

Grx4 family monothiol glutaredoxin;


Pssm-ID: 182759  Cd Length: 115  Bit Score: 169.31  E-value: 4.90e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   1 MDVMETIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:PRK10824   2 STTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELV 81
                         90       100
                 ....*....|....*....|....*....
gi 519054651  81 GGCDIVTEMYENGELKTLIESAASEDSSD 109
Cdd:PRK10824  82 GGCDIVIEMYQRGELQQLIKETAAKYKSE 110
GRX_PICOT_like cd03028
Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of ...
7-96 5.58e-56

Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein in Arabidopsis thaliana, and PfGLP-1, a GRX-like protein from Plasmodium falciparum.


Pssm-ID: 239326  Cd Length: 90  Bit Score: 168.06  E-value: 5.58e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   7 IKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGGCDIV 86
Cdd:cd03028    1 IKKLIKENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIV 80
                         90
                 ....*....|
gi 519054651  87 TEMYENGELK 96
Cdd:cd03028   81 KEMHESGELQ 90
PTZ00062 PTZ00062
glutaredoxin; Provisional
4-99 5.12e-35

glutaredoxin; Provisional


Pssm-ID: 240250 [Multi-domain]  Cd Length: 204  Bit Score: 118.75  E-value: 5.12e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651   4 METIKQQLSENPVILYMKGSPNAPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGGC 83
Cdd:PTZ00062 103 VEKIERLIRNHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNWPTYPQLYVNGELIGGH 182
                         90
                 ....*....|....*.
gi 519054651  84 DIVTEMYENGELKTLI 99
Cdd:PTZ00062 183 DIIKELYESNSLRKVI 198
GRX_family cd02066
Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins ...
15-91 5.47e-28

Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which are members of this family. E. coli GRX2, however, is a 24-kDa protein that belongs to the GSH S-transferase (GST) family.


Pssm-ID: 239017 [Multi-domain]  Cd Length: 72  Bit Score: 96.77  E-value: 5.47e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 519054651  15 PVILYMKGSpnapqCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGGCDIVTEMYE 91
Cdd:cd02066    1 KVVVFSKST-----CPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWPTVPQIFINGEFIGGYDDLKALHE 72
Glutaredoxin pfam00462
Glutaredoxin;
16-80 1.33e-20

Glutaredoxin;


Pssm-ID: 425695 [Multi-domain]  Cd Length: 60  Bit Score: 77.93  E-value: 1.33e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 519054651   16 VILYMKgspnaPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELV 80
Cdd:pfam00462   1 VVLYTK-----PTCPFCKRAKRLLKSLGVDFEEIDVDEDPEIREELKELSGWPTVPQVFIDGEHI 60
GrxC COG0695
Glutaredoxin [Posttranslational modification, protein turnover, chaperones];
15-100 3.78e-11

Glutaredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440459 [Multi-domain]  Cd Length: 74  Bit Score: 54.05  E-value: 3.78e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651  15 PVILYMKgspnaPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGGCDivtemyeNGE 94
Cdd:COG0695    1 KVTLYTT-----PGCPYCARAKRLLDEKGIPYEEIDVDEDPEAREELRERSGRRTVPVIFIGGEHLGGFD-------EGE 68

                 ....*.
gi 519054651  95 LKTLIE 100
Cdd:COG0695   69 LDALLA 74
GRX_GRXh_1_2_like cd03419
Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of ...
15-98 2.18e-08

Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, which are members of this subfamily. Also included in this subfamily are the N-terminal GRX domains of proteins similar to human thioredoxin reductase 1 and 3.


Pssm-ID: 239511 [Multi-domain]  Cd Length: 82  Bit Score: 47.15  E-value: 2.18e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651  15 PVILYMKGSpnapqCGFSQRTSQAVmaCGQRFAY----VDILSN-PELREGLKQYANWPTYPQLWVNGELVGGCDIVTEM 89
Cdd:cd03419    1 PVVVFSKSY-----CPYCKRAKSLL--KELGVKPavveLDQHEDgSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMAL 73

                 ....*....
gi 519054651  90 YENGELKTL 98
Cdd:cd03419   74 HKSGKLVKL 82
GRX_GRX_like cd03031
Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of ...
55-104 4.40e-06

Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.


Pssm-ID: 239329 [Multi-domain]  Cd Length: 147  Bit Score: 42.61  E-value: 4.40e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 519054651  55 PELREGLKQYANWPTYPQLWVNGELVGGCDIVTEMYENGELKTLIESAAS 104
Cdd:cd03031   46 EELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRLNESGELRKLLKGIRA 95
PRK10638 PRK10638
glutaredoxin 3; Provisional
29-100 1.21e-05

glutaredoxin 3; Provisional


Pssm-ID: 182607 [Multi-domain]  Cd Length: 83  Bit Score: 40.19  E-value: 1.21e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 519054651  29 CGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYANWPTYPQLWVNGELVGGCDIVTEMYENGELKTLIE 100
Cdd:PRK10638  12 CPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK 83
GRX_GRXb_1_3_like cd03418
Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of ...
15-93 3.67e-04

Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including E. coli GRX1 and GRX3, which are members of this subfamily.


Pssm-ID: 239510 [Multi-domain]  Cd Length: 75  Bit Score: 36.03  E-value: 3.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519054651  15 PVILYMKgspnaPQCGFSQRTSQAVMACGQRFAYVDILSNPELREGLKQYAN-WPTYPQLWVNGELVGGCDIVTEMYENG 93
Cdd:cd03418    1 KVEIYTK-----PNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGgRRTVPQIFIGDVHIGGCDDLYALERKG 75
GRX_hybridPRX5 cd03029
Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing ...
27-87 2.82e-03

Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH -> GSH reductase -> GSH -> GRX domain of hybrid -> PRX domain of hybrid -> peroxide substrate.


Pssm-ID: 239327 [Multi-domain]  Cd Length: 72  Bit Score: 33.64  E-value: 2.82e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 519054651  27 PQCGFSQRTSQAVMACGqrFAYVDI-LSNPELREGLKQYANWPTYPQLWVNGELVGGCDIVT 87
Cdd:cd03029    9 PGCPFCARAKAALQENG--ISYEEIpLGKDITGRSLRAVTGAMTVPQVFIDGELIGGSDDLE 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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