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Conserved domains on  [gi|518691136|ref|WP_019852829|]
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type Z 30S ribosomal protein S14 [Actinopolyspora mortivallis]

Protein Classification

30S ribosomal protein S14( domain architecture ID 10012995)

30S ribosomal protein S14 type Z is located in the peptidyl transferase center and involved in assembly of the 30S ribosome subunit

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.22e-34

type Z 30S ribosomal protein S14;


:

Pssm-ID: 181216  Cd Length: 61  Bit Score: 111.12  E-value: 1.22e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 518691136  1 MAKKALINKAARKPKFSVRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.22e-34

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 111.12  E-value: 1.22e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 518691136  1 MAKKALINKAARKPKFSVRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 6.96e-31

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 101.63  E-value: 6.96e-31
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 518691136  1 MAKKALINKAARKPKfSVRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 9-60 7.11e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.99  E-value: 7.11e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518691136   9 KAARKPKFS--VRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSS 60
Cdd:pfam00253  1 KLQKLPRNSspTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.22e-34

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 111.12  E-value: 1.22e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 518691136  1 MAKKALINKAARKPKFSVRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 6.96e-31

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 101.63  E-value: 6.96e-31
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 518691136  1 MAKKALINKAARKPKfSVRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 9-60 7.11e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.99  E-value: 7.11e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518691136   9 KAARKPKFS--VRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSS 60
Cdd:pfam00253  1 KLQKLPRNSspTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
rpsN PRK08881
30S ribosomal protein S14; Reviewed
 18-61 2.18e-17

30S ribosomal protein S14; Reviewed


Pssm-ID: 181574  Cd Length: 101  Bit Score: 68.64  E-value: 2.18e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 518691136  18 VRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:PRK08881  58 TRLRNRCELTGRPRGYYRKFGLSRIKLRELAHRGEIPGVVKASW 101
rps14 CHL00074
ribosomal protein S14
 18-61 2.30e-13

ribosomal protein S14


Pssm-ID: 214354  Cd Length: 100  Bit Score: 58.66  E-value: 2.30e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 518691136  18 VRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:CHL00074  57 TRLHNRCFLTGRPRGNYRDFGLSRHVLREMAHACLLPGVTKSSW 100
rpsN PRK06911
30S ribosomal protein S14; Reviewed
 18-61 1.71e-10

30S ribosomal protein S14; Reviewed


Pssm-ID: 180742 [Multi-domain]  Cd Length: 100  Bit Score: 51.60  E-value: 1.71e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 518691136  18 VRAYTRCQRCGRARAVLRKFGLCRICFREMAHAGELPGISKSSW 61
Cdd:PRK06911  57 VRYVTRCKQCGRPHAVYRKFNLCRICLRQQLMVGNIPGGRKSSW 100
rps14P PRK05766
30S ribosomal protein S14P; Reviewed
 12-49 1.45e-06

30S ribosomal protein S14P; Reviewed


Pssm-ID: 235598  Cd Length: 52  Bit Score: 40.26  E-value: 1.45e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 518691136 12 RKPKFSVRAYTRCQRCGRARAVLRKFG--LCRICFREMAH 49
Cdd:PRK05766  5 PKKRKYGKGARECQRCGRKQGLIRKYGlyLCRQCFREVAP 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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